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2009 International Conference on Biomedical and Pharmaceutical Engineering最新文献

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Numerical simulation for nasal flow with partial inferior turbinatomy-a turbulent model 局部下鼻甲切开术鼻流的数值模拟-湍流模型
Pub Date : 2009-12-01 DOI: 10.1109/ICBPE.2009.5384084
Xiao Bing Chen, H. Lee, V. Chong, D. Wang
Partial Inferior turbinectomy is typically performed for patients suffering from chronic nasal obstruction due to hypertrophy of inferior turbinates and are refractory to other more conservative treatments In this paper, the effects of the various manner of incision performed on the inferior turbinates in terms of the resulting nasal air flow pattern were analyzed using computational fluid dynamics (CFD). The three 3D nasal models with partial inferior turbinectomy were reconstructed from the MRI scans of a healthy human subject by simulating the three remaining shapes of inferior turbinate after the respective turbinate surgery with the use of the software MIMICS 12.1. Thereafter high resolution 3D volume meshes comprising boundary layer effects and computational domain exterior to the nose were constructed. Numerical simulations were carried out using FLUENTS for CFD simulations. The Reynolds averaged Navier-Stokes equations were solved for the turbulence flow with SST k - ω model. The consequences of the various types of turbinate surgery were compared with the originally healthy nasal model as well as the nasal model with severe nasal obstruction. The velocity streamlines, the total pressure drop through the nasal cavity, and the local wall shear stress distribution were presented. The existence of small vortices, relatively larger local velocity and wall shear stress showed that turbinate surgery should be carefully planned as it may affect normal local nasal functions.
下鼻甲部分切除术是由于下鼻甲肥大引起的慢性鼻塞患者的典型手术,其他保守的治疗方法难以治疗。本文利用计算流体动力学(CFD)分析了不同切口方式对下鼻甲鼻腔气流模式的影响。通过使用MIMICS 12.1软件模拟下鼻甲手术后剩余的三种形状,根据健康受试者的MRI扫描重建三个部分切除下鼻甲的3D鼻模型。在此基础上,构建了包含边界层效应和鼻鼻外计算域的高分辨率三维体网格。采用FLUENTS进行数值模拟。用SST k - ω模型求解了湍流流场的Reynolds平均Navier-Stokes方程。将不同鼻甲手术方式与原健康鼻模型及重度鼻塞鼻模型进行比较。给出了速度流线、通过鼻腔的总压降和局部壁面剪应力分布。小漩涡的存在,相对较大的局部速度和壁剪切应力表明鼻甲手术应仔细计划,因为它可能影响正常的局部鼻功能。
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引用次数: 3
Reversal of multidrug resistance using poly(L-lactide)-vitamin E TPGS micelles in breast cancer cell 利用聚l -丙交酯-维生素E TPGS胶束逆转乳腺癌细胞的多药耐药
Pub Date : 2009-12-01 DOI: 10.1109/ICBPE.2009.5384064
P. Y. Li, P. Lai, C. Lin
Drug resistance is a frequent clinical problem that seriously reduces the efficacy of many chemotherapy agents. In this study, the effect of micellar encapsulation using poly(L-lactide)-vitamin E TPGS (PLA-TPGS) copolymer on intracellular distribution of doxorubicin was studied in vitro. As our results, doxorubicin can be encapsulated successfully into PLA-TPGS formed micelle with a uniform particle size (≪ 200nm) that could exhibit the passive targeting ability to cancer tissue. Moreover, the nuclear accumulation of doxorubicin can be improved significantly in micelle form that can utilize as a potential carrier to overcome doxorubicin-resistance in breast MCF-7 cancer cells.
耐药是一个常见的临床问题,严重降低了许多化疗药物的疗效。本实验研究了聚l -丙交酯-维生素E TPGS (PLA-TPGS)共聚物胶束包封对阿霉素胞内分布的影响。我们的研究结果表明,阿霉素可以被成功地封装在PLA-TPGS形成的胶团中,该胶团具有均匀的粒径(≪200nm),能够表现出对癌症组织的被动靶向能力。此外,多柔比星的核积累可以以胶束形式显著改善,可以作为克服乳腺癌MCF-7癌细胞中多柔比星耐药的潜在载体。
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引用次数: 5
A surgical training simulator for temporal bone anatomy education 颞骨解剖教学的外科训练模拟器
Pub Date : 2009-12-01 DOI: 10.1109/ICBPE.2009.5384060
Wendan Xie, Weijia Kong, Enmin Song, Qiang Zhang
This paper presents a virtual reality system that allows a user to learn accurately mimic 3D temporal bone and ear anatomy. The computer-based system simulator is helpful to medical students in identifying the anatomic structures on the view of the auditory system. The surgical training system simulator can be effectively used to anatomic training and teaching at all levels of education.
本文提出了一个虚拟现实系统,允许用户学习准确模拟三维颞骨和耳部解剖。基于计算机的系统模拟器有助于医学生从听觉系统的角度识别解剖结构。该手术训练系统模拟器可有效地应用于各级教育的解剖训练和教学。
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引用次数: 0
Advances in the development of ultraviolet sterilization system for specific biological applications 生物专用紫外杀菌系统的研究进展
Pub Date : 2009-12-01 DOI: 10.1109/ICBPE.2009.5384081
S. Ravichandran, B.Y.X. Dan, Lim Wan Yi, Tan Kee Kwoon, Then Tze Kang, Siti Faradina Bte Isa, S. Kumar
The scope of the paper is to investigate the design of an ultraviolet sterilization unit developed to work in conjunction with a fluid dispenser for dispensing fluids in measured quantities periodically. Common problems associated with contamination of fluids in these dispensers have been carefully investigated to qualitatively document the requirements of the system. We have designed a protocol to study the efficiency of the system and in order to have a real picture of the antimicrobial effects of ultraviolet radiation at various locations inside the dispensing chamber. To implement this protocol, we have designed an implantable array which is capable of containing micro organisms in Petri dishes which can be stationed at various levels within the stainless steel dispenser. Studies on the microbial growth conducted periodically under the influence of ultraviolet radiation of known intensity provide a qualitative picture on the antimicrobial effects of ultraviolet rays at various depths. Thus it was possible to qualitatively analyze each sample for documenting antimicrobial effect. The study has been focused on the qualitative assessment of the antimicrobial effects at various parts of the dispenser and also the variations of the antimicrobial effects at various depths of the fluid contained in the dispenser. This study provides a good understanding on the intensity of the ultraviolet radiation required for providing a perfect antimicrobial environment and also other factors that are critical in the design of the system as a whole for dispensing fluids used in biological applications.
本文的范围是研究一种紫外线灭菌装置的设计,该装置与液体分配器一起工作,用于定期分配测量量的液体。与这些分配器中流体污染相关的常见问题已经过仔细调查,以定性地记录系统的要求。我们设计了一个方案来研究系统的效率,以便真实地了解紫外线辐射在点胶室内不同位置的抗菌效果。为了实现这一方案,我们设计了一个可植入的阵列,它能够在培养皿中容纳微生物,这些微生物可以在不锈钢分配器内的不同水平上安置。在已知强度的紫外线辐射影响下定期进行的微生物生长研究提供了不同深度紫外线抗菌作用的定性图像。因此,可以对每个样品进行定性分析,以记录抗菌效果。该研究的重点是对分配器各部分的抗菌效果进行定性评估,以及分配器中所含液体在不同深度处的抗菌效果变化。该研究提供了提供完美抗菌环境所需的紫外线辐射强度,以及在生物应用中分配液体的整个系统设计中至关重要的其他因素。
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引用次数: 2
Nonlinear mixed effects pharmacokinetic/pharmacodynamic analysis of the cholinesterase inhibitor pyridostigmine bromide in Chinese males 中国男性胆碱酯酶抑制剂吡哆斯的明的非线性混合效应药动学/药效学分析
Pub Date : 2009-12-01 DOI: 10.1109/ICBPE.2009.5384078
Seng Kok Yong, Loke Weng Keong, M. Shabbir, Jon Deoon Lee
Pyridostigmine is a reversible inhibitor of acetylcholinesterase (AChE). The objective of the present analysis was to characterise the population pharmacokinetics / pharmacodynamics (PK/PD) of pyridostigmine given as pyridostigmine bromide. Fifty healthy Chinese males received 7 doses of 30 mg of pyridostigmine bromide each every 8 hours orally. Plasma concentrations of pyridostigmine and red blood cell (RBC) AChE activity were determined at various times within 8 hours after the first and the seventh doses. The resulting PK data were fit to a single compartment open model with first order absorption and elimination. The PD was modelled using an inhibitory Emax model. The potential influence of demographic and biological covariates on the model parameters was investigated. Modelling was performed using NONMEM VI. The apparent clearance and volume of distribution as well as absorption rate constant of plasma pyridostigmine were estimated to be 136 L/hr, 130 L and 0.68 1/hr respectively. The maximum RBC AChE activity decrease (Emax) and plasma pyridostigmine concentration producing 50% of this reduction (EC50) were estimated to be 9.32 AChE units per gram haemoglobin and 51.9 ng/ml respectively. None of the tested covariates explained any additional variability in either PK or PD. Dosing simulations suggested that 30 mg repeated every 6 hours might be needed to achieve steady-state trough percentage inhibition above the recommended 10% in healthy Chinese male adults.
吡哆斯的明是乙酰胆碱酯酶(AChE)的可逆抑制剂。本分析的目的是表征吡哆斯的明给药的群体药代动力学/药效学(PK/PD)溴化吡哆斯的明。50名健康的中国男性每8小时口服7剂30毫克的溴化吡哆斯的明。在第一次和第七次给药后8小时内不同时间测定吡哆斯的明血药浓度和红细胞乙酰胆碱酯酶活性。得到的PK数据符合单室开放模型,具有一阶吸收和消除。PD采用抑制性Emax模型建模。研究了人口统计学和生物学协变量对模型参数的潜在影响。使用NONMEM VI进行建模,估计血浆中吡啶斯的明的表观清除率为136 L/hr,分布体积为130 L/hr,吸收率常数为0.68 1/hr。红细胞AChE活性的最大降低值(Emax)和血浆中产生这种降低的50%的吡啶斯的明浓度(EC50)估计分别为9.32 AChE单位/克血红蛋白和51.9 ng/ml。所有被测试的协变量都不能解释PK或PD的任何额外变异性。剂量模拟表明,在健康的中国成年男性中,每6小时重复30 mg可能需要达到超过推荐的10%的稳定抑制百分比。
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引用次数: 0
AS1411 aptamer for targetable photosensitizer delivery 用于靶向光敏剂输送的AS1411适体
Pub Date : 2009-12-01 DOI: 10.1109/ICBPE.2009.5384070
M. Shieh, Y. Shieh, P. Lai
A specialized G-quadruplex DNA aptamer with nucleolin targeting ability, AS1411, has been studied for cancer therapy. In this study, we report a novel delivery strategy for chemo-photodynamic combined treatment using AS1411 aptamer conjugated with tetra-(N-methyl-4-pyridyl)-porphine by intercalation and outside binding. Our results show that the apt-TMP complex exhibited higher TMPyP4 accumulation in nucleolin over-expressing MCF-7 breast cancer cells than in M10 normal epithelium cells. After irradiation for 180 sec, the photodamage was apparently observed in MCF-7 cells. These results indicate that AS1411 aptamer can play as a potential photosensitizer carrier for for cancer therapy.
一种特殊的具有核蛋白靶向能力的g -四重体DNA适体AS1411已被研究用于癌症治疗。在这项研究中,我们报道了一种利用AS1411适体与四-(n -甲基-4-吡啶基)-卟啉通过插层和外结合结合的方式进行化学-光动力联合治疗的新递送策略。我们的研究结果表明,与M10正常上皮细胞相比,apt-TMP复合物在过表达MCF-7的核蛋白乳腺癌细胞中表现出更高的TMPyP4积累。照射180秒后,MCF-7细胞出现明显的光损伤。这些结果表明AS1411适体可以作为一种潜在的光敏剂载体用于癌症治疗。
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引用次数: 0
Comparison of AdaBoost and logistic regression for detecting colorectal cancer patients with synchronous liver metastasis AdaBoost与logistic回归检测结直肠癌同步肝转移的比较
Pub Date : 2009-12-01 DOI: 10.1109/ICBPE.2009.5384087
Jingran Wen, Xiaoyan Zhang, Ye Xu, Zuofeng Li, Lei Liu
Synchronous liver metastasis is one of the leading causes of the mortality in colorectal cancer patients. In this study, predictive models based on AdaBoost and logistic regression for detecting colorectal cancer patients with synchronous liver metastasis before operation were built and compared. Information gain method, genetic algorithm and AdaBoost were used for feature selection. The predictive performance of each model was evaluated with 10-fold cross-validation and the area under the receiver operating characteristic (ROC) curves. Four predictive variables were identified: CEA, CA50, tumor location (rectum) and maximum diameter. The influence of missing values was also evaluated and compared using serum biomarkers CEA and CA50. Our results indicate that AdaBoost performs better on data set with missing values, while logistic regression has better sensitivity. Both models could be used to develop a predictive model for colorectal cancer patients with synchronous liver metastasis.
同步肝转移是结直肠癌患者死亡的主要原因之一。本研究建立基于AdaBoost和logistic回归的结直肠癌患者术前同步肝转移检测预测模型并进行比较。采用信息增益法、遗传算法和AdaBoost进行特征选择。采用10倍交叉验证和受试者工作特征(ROC)曲线下面积对各模型的预测性能进行评价。确定了四个预测变量:CEA、CA50、肿瘤位置(直肠)和最大直径。用血清生物标志物CEA和CA50评估和比较缺失值的影响。我们的研究结果表明,AdaBoost在缺失值数据集上表现更好,而逻辑回归具有更好的灵敏度。两种模型均可用于建立结直肠癌同步肝转移的预测模型。
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引用次数: 9
Identifying patterns of conformational changes in HLA-A*0201-related immunological activities HLA-A*0201相关免疫活性构象变化模式的鉴定
Pub Date : 2009-12-01 DOI: 10.1109/ICBPE.2009.5384065
Charlie Nathanael Otto, S. D. Handoko, K. C. Keong
Key to adaptive immune response is the recognition of HLA/peptide complexes by a particular T-cell receptor, which obviously is preceded by HLA binding of the antigenic peptides. Extreme polymorphism of the HLA gene has claimed exhaustive revelation of the possible (TCR-)HLA/peptide interactions to be intractable should it be based on the wet-lab experiments alone. Sequence-based and structure-based predictors have since been developed to allow researchers perform the wet-lab experiments selectively on the potential candidates that have previously been predicted to elicit some immunogenic activities. Structure-based predictors, which often include the use of molecular simulations and the concept of association as well as dissociation energy, are generally unsuited for high-throughput screening despite ability of these predictors to generate more accurate prediction results. As the binding and recognition process occurs, new inter-atomic interactions are introduced—suggesting conformational changes are really anticipated. Nonetheless, only parts of the constituents shall experience structural changes. It is therefore desirable that all the substantial regions around which conformational changes are likely to happen be identified. The internal coordinates—i.e. the bond lengths, the bond angles, as well as the torsion angles—of the HLA-A*0201 were analyzed in this work before and after the binding and recognition process took place. The findings can hence be used as a guide to decide the flexibility of the molecules in the molecular simulations. For many of them, it is common to treat the whole receptor as rigid and the whole ligand as flexible since fully flexible receptor could incur huge computational cost. Semi-flexible receptor, therefore, could yield better accuracy yet maintain computational cost within reasonable limit.
适应性免疫反应的关键是特定的t细胞受体对HLA/肽复合物的识别,这显然是在HLA结合抗原肽之前发生的。HLA基因的极端多态性要求详尽的揭示可能的(TCR-)HLA/肽相互作用是棘手的,如果它仅基于湿实验室实验。基于序列和基于结构的预测因子已经被开发出来,使研究人员能够选择性地对先前预测会引发某些免疫原性活性的潜在候选物进行湿实验室实验。基于结构的预测器,通常包括使用分子模拟和联想以及解离能的概念,通常不适合高通量筛选,尽管这些预测器能够产生更准确的预测结果。随着结合和识别过程的发生,新的原子间相互作用被引入,这表明构象变化确实是预期的。尽管如此,只有部分组成部分将经历结构性变化。因此,确定构象变化可能发生的所有实质性区域是可取的。内部坐标,也就是。本文分析了HLA-A*0201在结合和识别过程发生前后的键长、键角和扭转角。因此,这些发现可以作为分子模拟中确定分子柔韧性的指导。对于其中的许多,通常将整个受体视为刚性的,整个配体视为柔性的,因为完全柔性的受体会产生巨大的计算成本。因此,半柔性受体可以在保证计算成本在合理范围内的前提下获得更好的精度。
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引用次数: 1
Pervasive real-time biomedical monitoring system 无孔不入的实时生物医学监测系统
Pub Date : 2009-12-01 DOI: 10.1109/ICBPE.2009.5384101
Ajay M. Cheriyan, Albert O. Jarvi, Z. Kalbarczyk, R. Iyer, K. Watkin
With the tremendous advancements in low cost, power efficient hardware and the recent interest in biomedical embedded systems, numerous traditional biomedical systems can be replaced with smaller embedded systems that do real-time analysis to provide bio-feedback to the users. This paper presents a prototype of an embedded system which is capable of real-time data collection, using analog and digital sensors and processing, to compute physiological variables and metrics. These metrics in turn can be used to determine information about the user's general well being. The sensors provide motion, brain wave activity (EEG) and blood oxygenation (SpO2) information. The system presented automatically computes the application specific metrics and indicates the results of the detection scheme to the user and to a monitoring base station. The metrics being used have been validated using raw data from patients suffering epileptic seizures and from past research. The paper also deals with application scenarios for such systems and architecture for an FPGA based implementation is discussed.
随着低成本、节能硬件的巨大进步,以及最近对生物医学嵌入式系统的兴趣,许多传统的生物医学系统可以被更小的嵌入式系统所取代,这些嵌入式系统可以进行实时分析,向用户提供生物反馈。本文介绍了一个嵌入式系统的原型,该系统能够实时采集数据,利用模拟和数字传感器和处理,计算生理变量和指标。这些指标反过来可以用来确定有关用户总体健康的信息。传感器提供运动、脑电波活动(EEG)和血氧(SpO2)信息。所提出的系统自动计算特定应用的度量,并将检测方案的结果指示给用户和监控基站。所使用的指标已经通过使用癫痫发作患者的原始数据和过去的研究进行了验证。本文还讨论了该系统的应用场景,并讨论了基于FPGA的实现架构。
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引用次数: 4
Use of a rotary bioreactor for growth and differentiation of mesenchymal stem cells 旋转式生物反应器用于间充质干细胞的生长和分化
Pub Date : 2009-12-01 DOI: 10.1109/ICBPE.2009.5384090
X.S. Teh, Y. Chng, W. Chong, T. Foo
Bone graft generation in vitro is limited by slow nutrient-waste exchange through thick scaffolds and insufficient mechanical stimuli required for induction and differentiation of osteoprogenitor cells, often requiring the use of suitable bioreactors to circumvent these limitations. In this study, we test the suitability of a modified rotary miniPERM™ bioreactor system in inducing proliferation and osteodifferentiation of human foetal mesenchymal stem cell (hfMSC) on poly-ε-caprolactone (PCL)-tricalcium phosphate (TCP) scaffolds.
骨移植物的体外生成受限于通过厚支架缓慢的营养废物交换和诱导和分化骨祖细胞所需的机械刺激不足,通常需要使用合适的生物反应器来绕过这些限制。在这项研究中,我们测试了改良的旋转miniPERM™生物反应器系统在聚-ε-己内酯(PCL)-磷酸三钙(TCP)支架上诱导人胎儿间充质干细胞(hfMSC)增殖和骨分化的适用性。
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引用次数: 0
期刊
2009 International Conference on Biomedical and Pharmaceutical Engineering
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