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Focused ion beam fabrication of high-resolution electrochemical-electroluminescence coupling bipolar nanoelectrode array sensors 聚焦离子束制造高分辨率电化学-电致发光耦合双极纳米电极阵列传感器
IF 6.5 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-07-06 DOI: 10.1016/j.snr.2024.100220
Guopeng Li , Rui Hao

High temporal and spatial resolution electrochemical sensor arrays can greatly benefit various parallel sensing applications. Herein, we provide a simple method for the controlled and scaled fabrication of bipolar nanoelectrode arrays (BPnEAs) for high-resolution electrochemical sensing applications. BPnEAs are prepared on silicon nitride film windows through the dual-beam FIB nanofabrication technique. Coupling a conventional electrochemical redox reaction with a tris (2,20-bipyridyl) ruthenium /2-(dibutylamino)ethanol electrochemiluminescence (ECL) system, which is based on a high-viscosity solvent to reduce molecular diffusion, allows for the reporting of conventional electrochemical redox processes with high spatial and temporal resolution. The use of the BPnEA-ECL sensor is demonstrated on 10 × 10 Pt or C BPnEAs for monitoring the reduction of 0.5 M H2SO4. BPnEA-ECL sensors containing different electrode materials (Pt and C) are reported for the first time and are used to monitor the reduction of 0.5 M H2SO4, thus revealing the difference in electrocatalytic capacities between Pt and C. Subsequently, we reveal the outstanding capabilities of the BPnEA-ECL system for catalyst screening.

高时间和空间分辨率的电化学传感器阵列可大大有利于各种平行传感应用。在此,我们提供了一种用于高分辨率电化学传感应用的双极纳米电极阵列(BPnEAs)的可控和规模化制造的简单方法。BPnEAs 是通过双束 FIB 纳米制造技术在氮化硅薄膜窗口上制备的。将传统的电化学氧化还原反应与三(2,20-联吡啶)钌/2-(二丁基氨基)乙醇电化学发光(ECL)系统耦合(该系统基于高粘度溶剂以减少分子扩散),可报告具有高空间和时间分辨率的传统电化学氧化还原过程。我们在 10 × 10 Pt 或 C BPnEA 上演示了如何使用 BPnEA-ECL 传感器监测 0.5 M H2SO4 的还原过程。我们首次报道了含有不同电极材料(铂和碳)的 BPnEA-ECL 传感器,并将其用于监测 0.5 M H2SO4 的还原,从而揭示了铂和碳在电催化能力上的差异。
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引用次数: 0
Ultra-fast detection of pathogens and protein biomarkers using a low-cost silicon plasmonic biosensing platform 利用低成本硅等离子体生物传感平台超快速检测病原体和蛋白质生物标记物
IF 6.5 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-07-03 DOI: 10.1016/j.snr.2024.100221
Athanasios Manolis , Christia Eleftheriou , Mahmoud A. Elrabiaey , George Tsekenis , Sabato D'Auria , Antonio Varriale , Alessandro Capo , Maria Staiano , Bartos Chmielak , Anna Lena Schall-Giesecke , Stephan Suckow , Dimitris Tsiokos

In this paper, we report, for the first time to our knowledge, a new versatile and future proof diagnostic platform for diverse applications and heterogeneous biological targets. This platform relies on a plasmonic-augmented silicon photonic biochip to detect bacteria and protein biomarkers within minutes. To demonstrate the potential of this platform in diverse applications, we demonstrate the detection of two heterogeneous targets, the bacterium Escherichia coli (E. coli) and the molecule C-reactive protein (CRP) using a universal detection method. E. coli is one of the most commonly encountered bacterial pathogens involved in food monitoring, food born infections and water contamination applications, while CRP is a well-established disease severity indicator frequently used in common clinical practice. The biochip used is fully compatible with CMOS semiconductor manufacturing, while it hosts biosensors arrays for any combination of detection assays. Each biosensor exploits a 70 μm long aluminum plasmonic transducer within a silicon nitride waveguide-based Mach–Zehnder Interferometer. Each aluminum surface was silanized and biomodified with specific antibodies. Biosensing experiments revealed that CRP can be detected in diverse sample mediums, and E. coli detection was achieved in buffer at concentrations as low as 10 cells/ml within 13–25 min. The results are in good agreement with preceding numerical simulations. The modular nature of the reported biosensing platform makes it scalable and customizable, allowing nearly any combination of diagnostic tests targeting pathogens and proteins to be integrated on the same biochip for food quality monitoring, environmental monitoring, drug discovery and modern cell therapy manufacturing, or biomedical applications.

据我们所知,我们在本文中首次报告了一种新的多功能、面向未来的诊断平台,可用于多种应用和异构生物靶标。该平台依赖于等离子体增强硅光子生物芯片,可在几分钟内检测细菌和蛋白质生物标记物。为了证明该平台在各种应用中的潜力,我们展示了使用通用检测方法检测两种异构靶标--大肠杆菌(E. coli)和分子 C 反应蛋白(CRP)。大肠杆菌是食品监测、食源性感染和水污染应用中最常遇到的细菌病原体之一,而 CRP 则是常见临床实践中经常使用的一种成熟的疾病严重程度指标。所使用的生物芯片与 CMOS 半导体制造完全兼容,可承载用于任何检测组合的生物传感器阵列。每个生物传感器都在一个基于氮化硅波导的马赫-泽恩德干涉仪内利用了一个 70 μm 长的铝等离子传感器。每个铝表面都经过硅烷化处理,并用特定抗体进行生物修饰。生物传感实验表明,CRP 可在不同的样品介质中检测到,而大肠杆菌可在缓冲液中检测到,浓度低至 10 个细胞/毫升,检测时间为 13-25 分钟。实验结果与之前的数值模拟结果非常吻合。所报告的生物传感平台的模块化特性使其具有可扩展性和可定制性,几乎可以将任何针对病原体和蛋白质的诊断检测组合集成到同一生物芯片上,用于食品质量监测、环境监测、药物发现和现代细胞疗法制造或生物医学应用。
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引用次数: 0
Trace ammonia detection realized by mixed Ti-Zr metal-organic-frameworks and its application in exhaled breath sensing at room temperature 混合钛-锌金属有机框架实现的痕量氨检测及其在室温呼气传感中的应用
IF 6.5 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-28 DOI: 10.1016/j.snr.2024.100216
Zhiming Chen , Zhiwen Shi , Peng Zhang , Li Gao , Bingxin Liu , Lijuan Qiao

The presence of ammonia in exhaled human breath serves as a crucial biomarker for renal diseases. This paper presents a highly sensitive ammonia sensor operable at room temperature, utilizing a Ti/Zr dual metal MOF as its core component, synthesized through a straightforward solvothermal reaction approach. The Ti/Zr-MOF demonstrates excellent responsiveness to ammonia gas, with a detection limit of remarkable sensitivity, reaching as low as 2 ppm. Notably, the sensor exhibits practical insensitivity to similar concentrations of other major interfering breath volatiles, including acetone, ethanol, and saturated moisture. Electron Paramagnetic Resonance (EPR) analysis confirms the presence of oxygen vacancies (Ov) in Ti/Zr-MOF materials, with Ti/Zr-MOF exhibiting stronger Ov signals and the potential for enhanced NH3 adsorption and capture. In-situ FTIR spectrum analysis reveals ammonia-induced -OH (H2O) moiety formation, indicating a reaction between adsorbed O2 species and ammonia, resulting in decreased electrical resistance of Ti/Zr-MOF.

人体呼出气体中的氨是肾脏疾病的重要生物标志物。本文介绍了一种可在室温下工作的高灵敏度氨气传感器,该传感器以 Ti/Zr 双金属 MOF 为核心成分,通过直接的溶解热反应方法合成。Ti/Zr-MOF 对氨气的反应灵敏度极高,检测限低至 2 ppm。值得注意的是,该传感器对类似浓度的其他主要干扰呼气挥发物(包括丙酮、乙醇和饱和湿气)表现出实际的不敏感性。电子顺磁共振 (EPR) 分析证实了 Ti/Zr-MOF 材料中存在氧空位 (Ov),Ti/Zr-MOF 显示出更强的 Ov 信号,具有增强 NH3 吸附和捕获的潜力。原位傅立叶变换红外光谱分析揭示了氨诱导的 -OH (H2O) 分子的形成,表明吸附的 O2- 物种与氨发生了反应,从而降低了 Ti/Zr-MOF 的电阻。
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引用次数: 0
Prussian blue nanofilm-sensitized plasmonic electrochemical microscopy for spatially resolved detection of the localized delivery of hydrogen peroxide 普鲁士蓝纳米薄膜敏化质子电化学显微镜用于空间分辨检测过氧化氢的局部释放
IF 6.5 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-26 DOI: 10.1016/j.snr.2024.100218
Adaly Garcia, Christina Dhoj, Samuel Groysman, Kinsley Wang, Stellina Ao, Aimee Anguiano, Tony Tran, Dianlu Jiang, Yixian Wang

Hydrogen peroxide (H2O2) sensing has been widely investigated using various electrochemical methods, yet the challenge of finding an imaging technique capable of real-time, spatially resolved detection remains. Addressing this, we introduce a Prussian blue (PB) nanofilm-sensitized plasmonic electrochemical microscopy (PEM) technique that successfully visualizes the localized delivery of H2O2. The PB nanofilm was carefully characterized, and its sensing capability towards H2O2 was demonstrated in amperometric mode. Employing a precise micromanipulator system, we controlled a micropipette to create a localized concentration gradient on the sensor surface and monitored the gradient through the PB nanofilm-sensitized PEM. The accuracy of the obtained concentration values was further validated by numerical simulations based on finite-element methods. Our technique ensures dependable localized detection, and we anticipate that advancements in film uniformity will further improve the resolution. The potential applications of this technique are broad and significant, including the opportunity to investigate single-cell exocytosis with neurotransmitters like dopamine, thus offering a promising avenue for future biomedical research.

人们利用各种电化学方法对过氧化氢(H2O2)传感进行了广泛研究,但寻找一种能够进行实时、空间分辨检测的成像技术仍是一项挑战。为了解决这个问题,我们介绍了一种普鲁士蓝(PB)纳米薄膜敏化等离子体电化学显微镜(PEM)技术,它能成功地对 H2O2 的局部传递进行可视化。我们仔细研究了 PB 纳米薄膜的特性,并在安培模式下证明了它对 H2O2 的传感能力。我们利用精确的微机械手系统控制微吸管在传感器表面形成局部浓度梯度,并通过 PB 纳米薄膜敏化的 PEM 监测梯度。基于有限元方法的数值模拟进一步验证了所获浓度值的准确性。我们的技术确保了可靠的局部检测,我们预计薄膜均匀性的进步将进一步提高分辨率。这项技术的潜在应用领域广泛而重要,包括有机会研究多巴胺等神经递质的单细胞外渗,从而为未来的生物医学研究提供了一条前景广阔的途径。
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引用次数: 0
Smartphone enabled machine learning approach assisted copper (II) quantification and opto-electrochemical explosive recognition by Aldazine-functionalized chemobiosensor 智能手机支持的机器学习方法通过醛嗪功能化化学生物传感器辅助铜 (II) 定量和光电化学爆炸物识别
IF 6.5 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-25 DOI: 10.1016/j.snr.2024.100215
Mohit Kumar Chattopadhyay , Amita Mondal , Abhijit Hazra , Swarup Kumar Tarai , Bishwajit Singh Kapoor , Sudit S. Mukhopadhyay , Surya Sarkar , Priyabrata Banerjee

An Aldazine-based optoelectrochemical sensor, BMH (1-(quinolin-4-ylmethylene)hydrazono)methyl)naphthalen-2-ol) has been introduced herein for selective detection of aqueous copper (Cu2+) and 2, 4, 6-Trinitrophenol (TNP) at an ultra-low level detection limit (0.09 ppm for Cu2+ and 0.019 ppm for TNP). Multichannel recognition aptitude of the chemosensor (BMH) towards both Cu2+ and TNP along with bountiful practical applications ascertained it as an innovative one in the environmental and biomedical domains. BMH can detect Cu2+ in water, fetal bovine serum, and human urine samples, while explosive TNP can be identified in water, soil, and matches powder. The intracellular Cu2+ and TNP recognition efficiencies of BMH have been investigated in human lung cancer cell lines (A459). The hassle-free smartphone ensemble machine learning approach for Cu2+quantification has been introduced which would certainly be a significant addition in the domain of water quality analysis. Moreover, the ethylenediaminetetraacetic acid (EDTA) mediated reversibility of the probe could serve as a logic gate imitating electrical circuitry.

本文介绍了一种基于哒嗪的光电化学传感器 BMH(1-(quinolin-4-ylmethylene)hydrazono)methyl)naphthalen-2-ol),用于选择性检测水体中的铜(Cu2+)和 2, 4, 6-三硝基苯酚(TNP),检测限超低(Cu2+ 为 0.09 ppm,TNP 为 0.019 ppm)。化学传感器(BMH)对 Cu2+ 和 TNP 的多通道识别能力以及丰富的实际应用确定了它在环境和生物医学领域的创新性。BMH 可以检测水、胎牛血清和人体尿液样本中的 Cu2+,而爆炸性 TNP 则可以在水、土壤和火柴粉末中识别。在人类肺癌细胞系(A459)中研究了 BMH 的细胞内 Cu2+ 和 TNP 识别效率。该研究还介绍了用于 Cu2+ 定量的无障碍智能手机集合机器学习方法,这无疑是对水质分析领域的重要补充。此外,乙二胺四乙酸(EDTA)介导的探针可逆性可作为模仿电路的逻辑门。
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引用次数: 0
A novel molecularly imprinted polymer sensor for sweat cortisol with embedded probe based on the co-deposition of Prussian Blue and Polypyrrole 基于普鲁士蓝和聚吡咯共沉积技术的带嵌入探针的新型汗皮质醇分子印迹聚合物传感器
IF 6.5 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-24 DOI: 10.1016/j.snr.2024.100217
Zixuan Song , Minghui Yin , Bo Rui , Tiezhu Liu , Wei Song , Li Sun , Shengmin Li , Jun Wang , Mengdi Han , Guangyang Gou , Ning Xue , Chunxiu Liu

The cortisol in human body is a crucial biomarker in terms of wellness management, mental state monitoring and stress-related disorder diagnosis. Therefore, the rapid, reliable and facile measurement of cortisol concentration has attracted extensive research interest. However, traditional cortisol detection such as immunosensing requires demanding laboratory layout, lengthy procedures and high costs, which means, consequently, it is incompatible with the current goal of cortisol sensing. Given the contradiction, an electrochemical sensor based on molecularly imprinted polymer (MIP) for simple, efficient, non-invasive cortisol detection was proposed. The two-step approach employed is simple enough and allows for the mass production of devices. And the embedding of Prussian Blue (PB) within the MIP layer eliminates the need for complex external probes, thereby making the resultant sensors more suitable for integration into wearable devices. We firstly demonstrated the feasibility of the proposed strategy and characterized the successful formation of cavities specific to cortisol molecules. Thereafter, we measured the dependence of the current response on cortisol concentration in Phosphate Buffered Saline (PBS) buffer, which revealed a near-linear relationship between the logarithm of the cortisol concentration and the redox current from 10−9 mol/L to 10−5 mol/L, covering the optimal range of cortisol concentration in sweat. Subsequently, sensors with the same specifications were prepared and tested in PBS buffer, exhibiting good consistency. In artificial sweat, we further demonstrated that they have benign selectivity, interference immunity and great potential in practical applications.

人体内的皮质醇是健康管理、精神状态监测和应激相关疾病诊断的重要生物标志物。因此,皮质醇浓度的快速、可靠和简便测量引起了广泛的研究兴趣。然而,传统的皮质醇检测方法(如免疫传感)需要苛刻的实验室布局、冗长的程序和高昂的成本,这意味着它不符合当前皮质醇传感的目标。鉴于这一矛盾,研究人员提出了一种基于分子印迹聚合物(MIP)的电化学传感器,用于简单、高效、无创的皮质醇检测。所采用的两步法非常简单,可实现设备的批量生产。在 MIP 层中嵌入普鲁士蓝 (PB),无需复杂的外部探针,从而使产生的传感器更适合集成到可穿戴设备中。我们首先证明了所提策略的可行性,并描述了成功形成皮质醇分子特异性空腔的特征。随后,我们测量了在磷酸盐缓冲盐水(PBS)缓冲液中电流响应对皮质醇浓度的依赖性,结果表明在 10-9 摩尔/升至 10-5 摩尔/升之间,皮质醇浓度的对数与氧化还原电流之间存在近似线性关系,涵盖了汗液中皮质醇浓度的最佳范围。随后,我们制备了具有相同规格的传感器,并在 PBS 缓冲液中进行了测试,结果显示一致性良好。在人工汗液中,我们进一步证明了它们具有良性选择性、抗干扰性和巨大的实际应用潜力。
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引用次数: 0
A 16-channel Si probe monolithically integrated with CMOS chips for neural recording 用于神经记录的与 CMOS 芯片单片集成的 16 通道硅探针
IF 6.5 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-21 DOI: 10.1016/j.snr.2024.100206
Guang-Yang Gou , Changhua You , Pan Yao , Yu-Sen Guo , Tie-Zhu Liu , Zi-Xuan Song , Ben-Yuan He , MingHui Yin , Xuan Zhang , Chunxiu Liu , Jun Zhou , Xuan Sun , Chengyu Zhuang , Yuan-Dong Gu , Lei Yao , Ning Xue , Ming Zhao

Multi-channel neural electrodes as a crucial means are of great significance for information exchange between the brain and computers. Herein, we present a 16-channel Si-based active neural probe system that achieves a monolithic integration between the electrodes and circuits in a single probe, making it a standalone integrated electrophysiology recording system. The ASIC prepared on a base (2×2mm2) is a 16-channel analog frontend (AFE) for neural recording, and each channel has a low-noise amplifier (LNA), a bandpass filter (BPF), a buffer and a current bias circuit. The 258 neural signal recording electrodes (22×24μm2) are densely packed on a 50 μm thick, 100 μm wide, and 3 mm long shank. The ASIC of neural probe, internal interconnecting wires are all implemented in commercial SMIC 0.18 μm CMOS technology. The neural probe system achieves a 3.6 μVrms input-referred noise (IRN) in a bandwidth of 1.1Hz-10 kHz, 70.8 μW power consumption, 0.0785 mm2 area per channel, as well as an AFE gain of 58.1 dB Furthermore, the impedances of the Au electrodes can be obtained as 0.5–2.1 MΩ at a frequency of 1 kHz. The functionality of a 16-channel silicon-based neural probe is validated in an in-vivo experiment on lab rats.

多通道神经电极作为一种重要手段,对大脑与计算机之间的信息交流具有重要意义。在这里,我们介绍一种基于硅的 16 通道有源神经探针系统,该系统实现了电极和电路在单个探针中的单片集成,使其成为独立的集成电生理记录系统。在底座(2×2 平方毫米)上制备的 ASIC 是用于神经记录的 16 通道模拟前端(AFE),每个通道都有一个低噪声放大器(LNA)、一个带通滤波器(BPF)、一个缓冲器和一个电流偏置电路。258 个神经信号记录电极(22×24μm2)密集排列在一个厚 50 μm、宽 100 μm、长 3 mm 的柄上。神经探针的 ASIC 和内部互连线均采用 0.18 μm CMOS 商业 SMIC 技术实现。神经探针系统在 1.1Hz-10 kHz 的带宽内实现了 3.6 μVrms 的输入参考噪声(IRN),功耗为 70.8 μW,每个通道的面积为 0.0785 平方毫米,AFE 增益为 58.1 dB,此外,金电极的阻抗在 1 kHz 频率下可达到 0.5-2.1 MΩ。16 通道硅基神经探针的功能在实验鼠的体内实验中得到了验证。
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引用次数: 0
Critical review of potential technologies for a wearable benzene sensor system 对可穿戴式苯传感器系统潜在技术的严格审查
IF 6.5 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-20 DOI: 10.1016/j.snr.2024.100210
Tim Dunker, Alain Marc Ferber, Håkon Sagberg, Kari Anne Hestnes Bakke

We evaluate different methods to detect benzene at a parts-per-billion level regarding their potential to be used in a wearable sensor. Benzene is a carcinogenic molecule, regarded as a major health threat by the World Health Organization. A wearable sensor is necessary to detect leaks immediately, but it is challenging to achieve such low limits of detection and quantification, even with laboratory equipment. A wearable sensor must, in addition to good selectivity and sensitivity, meet stricter requirements of size, weight, temperature, repeatability, and power consumption. We conclude that the most promising techniques for a wearable sensor are either infrared photoacoustic spectroscopy near 14.8 μm, or a photoionization detector combined with one of three selective devices: micro-gas chromatography, cavitands, or catalytic filters (WO3, for example). Ultraviolet photoacoustic spectroscopy may also be a suitable future technique for a wearable benzene sensor when efficient LEDs and lasers become available at many UV-C wavelengths.

我们对不同的苯检测方法进行了评估,以了解它们在可穿戴传感器中的应用潜力。苯是一种致癌分子,被世界卫生组织视为主要的健康威胁。可穿戴式传感器是立即检测泄漏的必要设备,但要达到如此低的检测和定量限值,即使使用实验室设备也很困难。除了良好的选择性和灵敏度外,可穿戴传感器还必须满足对尺寸、重量、温度、可重复性和功耗的更严格要求。我们的结论是,最有前途的可穿戴传感器技术要么是 14.8 μm 附近的红外光声光谱技术,要么是光离子化检测器与微气相色谱、空穴剂或催化过滤器(例如 WO3)这三种选择性装置之一相结合的技术。当许多紫外-C 波长的高效发光二极管和激光器问世时,紫外光声光谱法也可能成为未来可穿戴式苯传感器的合适技术。
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引用次数: 0
In-situ spectroelectrochemical analysis: Irreversible deformation of cesium lead bromide Perovskite Quantum Dots in SiOx matrices 原位光谱电化学分析:氧化硅基质中的溴化铯铅 Perovskite 量子点的不可逆变形
IF 6.5 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-20 DOI: 10.1016/j.snr.2024.100208
Hyeri Jeon , Hyeonyeong Jo , Sumi Seo , Soo Jeong Lee , Seog Joon Yoon , Donghoon Han

To practically utilized the organometallic lead halide perovskites to optoelectronic devices and photoelectrochemical cells, numerous efforts have been utilized to obtain the perovskites with low-energy process with coverage of various inorganic mediums to improve stability against humidity. By utilizing ligand-assisted reprecipitation process, under ambient condition at room temperature, the dimensionally confined perovskite quantum dots in silica matrices (PQD@SiOx) were obtained, and they were stable under several months under the ambient condition. To apply the PQD@SiOx to the photoelectrochemical cells by introducing direct contact between PQD@SiOx and electrolyte, the material/photophysical properties under electrochemical conditions are necessary to be studied. However, the role of silica coverage to the electrochemical behaviors of the PQD cores in the silica medium were not yet studied. In this work, under the electrochemical conditions, the oxidative and reductive behaviors of the PQD@SiOx were studied. Also, through in-situ spectroelectrochemical study, the electrochemically induced irreversible deformation process were tracked. The findings of this study could be used to understand role of silica coverage and develop the strategy to improve the protecting behavior of the silica for the PQD cores to utilize into the photoelectrochemical cells.

为了将有机金属卤化铅包晶石实际应用于光电器件和光电化学电池,人们做出了许多努力,通过低能耗工艺获得包晶石,并覆盖各种无机介质以提高其防潮稳定性。利用配体辅助再沉淀工艺,在室温环境条件下获得了硅基质中的尺寸约束包晶量子点(PQD@SiOx),并在环境条件下稳定数月。为了将 PQD@SiOx 应用于光电化学电池,使 PQD@SiOx 与电解质直接接触,有必要对其在电化学条件下的材料/光物理性质进行研究。然而,二氧化硅覆盖对 PQD 内核在二氧化硅介质中的电化学行为所起的作用尚未得到研究。本研究在电化学条件下研究了 PQD@SiOx 的氧化和还原行为。同时,通过原位光谱电化学研究,跟踪了电化学诱导的不可逆变形过程。这项研究的结果可用于了解二氧化硅覆盖层的作用,并制定策略来改善二氧化硅对 PQD 内核的保护行为,以便将其应用到光电化学电池中。
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引用次数: 0
Rapid and portable quantification of HIV RNA via a smartphone-enabled digital CRISPR device and deep learning 通过支持智能手机的数字 CRISPR 设备和深度学习,快速、便携地量化艾滋病毒 RNA
IF 6.5 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-06-19 DOI: 10.1016/j.snr.2024.100212
Hoan T. Ngo , Patarajarin Akarapipad , Pei-Wei Lee , Joon Soo Park , Fan-En Chen , Alexander Y. Trick , Tza-Huei Wang , Kuangwen Hsieh

For the 29.8 million people in the world living with HIV/AIDS and receiving antiretroviral therapy, it is crucial to monitor their HIV viral loads. To this end, rapid and portable diagnostic tools that can quantify HIV RNA are critically needed. We report herein a rapid and quantitative digital CRISPR-assisted HIV RNA detection assay that has been implemented within a portable smartphone-based device as a potential solution. Specifically, we first developed a fluorescence-based reverse transcription recombinase polymerase amplification (RT-RPA)-CRISPR assay that can efficiently detect HIV RNA at 42 °C. We then implemented this assay within a commercial stamp-sized digital chip, where RNA molecules were quantified as strongly fluorescent digital reaction wells. The isothermal reaction condition and the strong fluorescence in the digital chip simplified the design of thermal and optical modules, allowing us to engineer a palm-size device measuring 70 × 115 × 80 mm and weighing less than 0.6 kg. We also capitalized the smartphone by developing a custom app to control the device, perform the digital assay, and capture fluorescence images throughout the assay using the smartphone's camera. Moreover, we trained and verified a deep learning-based algorithm for analyzing fluorescence images and identifying positive digital reaction wells with high accuracy. Using our smartphone-enabled digital CRISPR device, we successfully detected as low as 75 copies of HIV RNA in just 15 min, showing its potential toward monitoring of HIV viral loads and aiding the global effort to combat the HIV/AIDS epidemic.

对于全球 2980 万接受抗逆转录病毒治疗的艾滋病毒/艾滋病感染者来说,监测他们的艾滋病毒病毒载量至关重要。为此,亟需能够定量检测 HIV RNA 的快速便携诊断工具。我们在此报告一种快速、定量的数字 CRISPR 辅助 HIV RNA 检测方法,该方法已在基于智能手机的便携式设备中实现,是一种潜在的解决方案。具体来说,我们首先开发了一种基于荧光的反转录重组聚合酶扩增(RT-RPA)-CRISPR 检测方法,该方法可在 42 °C 温度下有效检测 HIV RNA。然后,我们在商用邮票大小的数字芯片中实现了这一检测方法,RNA 分子作为强荧光数字反应孔被量化。数字芯片中的等温反应条件和强荧光简化了热模块和光学模块的设计,使我们能够设计出尺寸为 70 × 115 × 80 毫米、重量不到 0.6 千克的手掌大小的设备。我们还利用智能手机,开发了一款定制应用程序来控制设备、执行数字检测,并在整个检测过程中使用智能手机的摄像头捕捉荧光图像。此外,我们还训练并验证了一种基于深度学习的算法,用于分析荧光图像并高精度地识别阳性数字反应孔。利用我们的智能手机数字 CRISPR 设备,我们在短短 15 分钟内就成功检测到了低至 75 个拷贝的 HIV RNA,显示了其在监测 HIV 病毒载量和协助全球抗击艾滋病流行方面的潜力。
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