Pub Date : 2024-09-23DOI: 10.1186/s43088-024-00526-5
Moustafa M. Morsy, R. G. Ahmed, Mohammed Abdel-Gabbar
Background
This research aims to determine the probable protective effect of nano-curcumin (N-CUR) on caffeine (1,3,7-trimethylxanthine)-induced neurotoxicity in cerebral rats.
Methods
Twenty-four male Wistar rats were divided into three groups: control, caffeine (150 mg kg−1), and caffeine (150 mg kg−1) treated with N-CUR (300 mg kg−1). All treatments were administrated by gavage every day for a month.
Results
Administration of caffeine significantly elevated the levels of serum interleukins 6 (IL-6), tumor necrosis factor-alpha (TNF-α), vascular endothelial growth factor (VEGF), and cyclooxygenase2 (COX-2). Also, there was a significant increase in levels of cerebral malondialdehyde (MDA), significantly diminished glutathione (GSH), and superoxide dismutase (SOD) activity. Caffeine administration significantly downregulated the gene expression of nuclear factor erythroid 2-related factor 2 (Nrf2) and upregulated the expression of nuclear factor kappa-light-chain enhancer of activated B cells (NF-κB). Administration of N-CUR caused a significant amelioration in TNF-α and IL-6 levels and a significant rise in SOD activity, while it caused a significant downregulation in NF-κB mRNA expression. Additionally, N-CUR has exerted insignificant amelioration of COX-2 and MDA contents and Nrf2 mRNA expression compared to the caffeine-treated group.
Conclusion
N-CUR may have a mild to moderate ameliorative effect on caffeine-induced apoptosis, oxidative stress, and inflammatory response in the cerebrum.
{"title":"Nano-Curcumin improves caffeine-induced cerebral alterations in male Wistar rats by modifying oxidative stress, inflammation, and COX-2/NF-κB/Nrf2 signaling","authors":"Moustafa M. Morsy, R. G. Ahmed, Mohammed Abdel-Gabbar","doi":"10.1186/s43088-024-00526-5","DOIUrl":"10.1186/s43088-024-00526-5","url":null,"abstract":"<div><h3>Background</h3><p>This research aims to determine the probable protective effect of nano-curcumin (N-CUR) on caffeine (1,3,7-trimethylxanthine)-induced neurotoxicity in cerebral rats.</p><h3>Methods</h3><p>Twenty-four male Wistar rats were divided into three groups: control, caffeine (150 mg kg<sup>−1</sup>), and caffeine (150 mg kg<sup>−1</sup>) treated with N-CUR (300 mg kg<sup>−1</sup>). All treatments were administrated by gavage every day for a month.</p><h3>Results</h3><p>Administration of caffeine significantly elevated the levels of serum interleukins 6 (IL-6), tumor necrosis factor-alpha (TNF-α), vascular endothelial growth factor (VEGF), and cyclooxygenase2 (COX-2). Also, there was a significant increase in levels of cerebral malondialdehyde (MDA), significantly diminished glutathione (GSH), and superoxide dismutase (SOD) activity. Caffeine administration significantly downregulated the gene expression of nuclear factor erythroid 2-related factor 2 (Nrf2) and upregulated the expression of nuclear factor kappa-light-chain enhancer of activated B cells (NF-κB). Administration of N-CUR caused a significant amelioration in TNF-α and IL-6 levels and a significant rise in SOD activity, while it caused a significant downregulation in NF-κB mRNA expression. Additionally, N-CUR has exerted insignificant amelioration of COX-2 and MDA contents and Nrf2 mRNA expression compared to the caffeine-treated group.</p><h3>Conclusion</h3><p>N-CUR may have a mild to moderate ameliorative effect on caffeine-induced apoptosis, oxidative stress, and inflammatory response in the cerebrum.</p></div>","PeriodicalId":481,"journal":{"name":"Beni-Suef University Journal of Basic and Applied Sciences","volume":"13 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bjbas.springeropen.com/counter/pdf/10.1186/s43088-024-00526-5","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142313215","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-19DOI: 10.1186/s43088-024-00551-4
Kousar Shaheen, Roohi Zafar, Saba Javaid, Ahmed Ali Rajput
Background
The variational method, a quantum mechanical approach, estimates effective charge distributions and ground-state energy by minimizing the Hamiltonian's expectation value using trial wave functions with adjustable parameters. This method provides valuable insights into system behavior and is widely used in theoretical chemistry and physics. This paper aims to investigate ground-state energies and isoelectronic sequences using the variational method, introducing a novel approach for analyzing multi-electron systems. This technique allows for determining effective charge values and ground-state energies for 2–5 electrons sequence up to Z ≤ 20. Hydrogenic wave functions are used as a trial wave function to calculate effective charge in 1 s, 2 s, and 2p states. Two varying parameters were used to calculate an approximate wave function for the system. These values are then used in non-relativistic Hamiltonian with electron–electron interaction terms to calculate the ground-state energy of an atom.
Result
The results align with the reported experimental values, showing a marginal 1% error.
Conclusion
A Python algorithm is established based on the variational principle. It was found that, based on a few selected parameters in scripting the program, a very promising result was obtained. Furthermore, adding more variational parameters can minimize the difference between experimental and theoretical values, and this technique can be extended to elements with higher atomic numbers.
背景变分法是一种量子力学方法,通过使用参数可调的试验波函数最小化哈密顿期望值来估计有效电荷分布和基态能量。这种方法为系统行为提供了有价值的见解,被广泛应用于理论化学和物理学。本文旨在利用变分法研究基态能量和等电子序列,为分析多电子系统引入一种新方法。这种技术可以确定 2-5 电子序列的有效电荷值和基态能量,最高可达 Z ≤ 20。氢波函数被用作计算 1s、2s 和 2p 态有效电荷的试验波函数。使用两个变化参数来计算系统的近似波函数。然后将这些值用于带有电子-电子相互作用项的非相对论哈密顿中,计算出原子的基态能量。研究发现,在编写程序时只需选择几个参数,就能得到非常理想的结果。此外,添加更多的变分参数可以将实验值和理论值之间的差异最小化,而且这种技术还可以扩展到原子序数更高的元素。
{"title":"Analytical estimate of effective charge and ground-state energies of two to five electron sequences up to atomic number 20 utilizing the variational method","authors":"Kousar Shaheen, Roohi Zafar, Saba Javaid, Ahmed Ali Rajput","doi":"10.1186/s43088-024-00551-4","DOIUrl":"10.1186/s43088-024-00551-4","url":null,"abstract":"<div><h3>Background</h3><p>The variational method, a quantum mechanical approach, estimates effective charge distributions and ground-state energy by minimizing the Hamiltonian's expectation value using trial wave functions with adjustable parameters. This method provides valuable insights into system behavior and is widely used in theoretical chemistry and physics. This paper aims to investigate ground-state energies and isoelectronic sequences using the variational method, introducing a novel approach for analyzing multi-electron systems. This technique allows for determining effective charge values and ground-state energies for 2–5 electrons sequence up to Z ≤ 20. Hydrogenic wave functions are used as a trial wave function to calculate effective charge in 1 s, 2 s, and 2p states. Two varying parameters were used to calculate an approximate wave function for the system. These values are then used in non-relativistic Hamiltonian with electron–electron interaction terms to calculate the ground-state energy of an atom.</p><h3>Result</h3><p>The results align with the reported experimental values, showing a marginal 1% error.</p><h3>Conclusion</h3><p>A Python algorithm is established based on the variational principle. It was found that, based on a few selected parameters in scripting the program, a very promising result was obtained. Furthermore, adding more variational parameters can minimize the difference between experimental and theoretical values, and this technique can be extended to elements with higher atomic numbers.</p></div>","PeriodicalId":481,"journal":{"name":"Beni-Suef University Journal of Basic and Applied Sciences","volume":"13 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bjbas.springeropen.com/counter/pdf/10.1186/s43088-024-00551-4","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142246683","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Aim is to analyze alterations in third and fourth corneal higher-order aberrations using a ray tracing aberrometer (iTrace) induced by SMILE (small incision lenticule extraction) refractive surgery on Algerian patients; and also to investigate how corneal aberrations vary with spherical equivalent (SE), corneal central thickness (CCT), and age. Design Prospective, non-randomized case series that were carried out at the Chiali Smile Center, Algiers, Algeria.
Participants
A total of 219 eyes from 110 myopic patients, with and without astigmatism, successfully concluded the ultimate follow-up. Participants exhibited an average age of 32.48 years, with preoperative mean corneal high-order aberrations (CHOA) measuring 0.005 ± 0.036 μm.
Methods
A tracking trend analysis of high-order aberrations (HOAs) was conducted on the three groups of patients, assessing total corneal high-order aberrations after SMILE over periods of two, six, and twelve months.
Results
A substantial increase in total corneal high-order aberrations following SMILE, with a P value < 0.05. Conversely, there was a noteworthy and significant decrease in vertical trefoil for all groups (P value = 0.000). Interestingly, the corneal higher-order aberrations were more pronounced after two months compared to the six and twelve-month intervals. Spherical aberration demonstrated a significant increase with the extent of preoperative myopia and preoperative spherical equivalent both before and after SMILE surgery (P < 0.05), particularly in cases of high myopia. Moreover, there were significant reductions in preoperative and postoperative vertical coma (P = 0.047, P = 0.004, respectively) corresponding to the degree of preoperative myopia, with a more substantial decrease in vertical coma observed in cases of low myopia.
Conclusion
In the post-SMILE period, a notable increase in vertical coma and spherical aberrations was observed, accompanied by a significant decrease in vertical trefoil across all eyes. These aberration changes were identified to be closely associated with the spherical equivalent.
{"title":"Analysis of third and fourth corneal high-order aberrations before and after small incision lenticule extraction (SMILE) in myopic and myopic astigmatic eyes using ray tracing aberrometry","authors":"Sarra Belgacem, Saoussene Habani, Daoud Guernazi, Fatiha Kail, Selma Chiali","doi":"10.1186/s43088-024-00544-3","DOIUrl":"10.1186/s43088-024-00544-3","url":null,"abstract":"<div><h3>Background</h3><p>Aim is to analyze alterations in third and fourth corneal higher-order aberrations using a ray tracing aberrometer (iTrace) induced by SMILE (small incision lenticule extraction) refractive surgery on Algerian patients; and also to investigate how corneal aberrations vary with spherical equivalent (SE), corneal central thickness (CCT), and age. Design Prospective, non-randomized case series that were carried out at the Chiali Smile Center, Algiers, Algeria.</p><h3>Participants</h3><p>A total of 219 eyes from 110 myopic patients, with and without astigmatism, successfully concluded the ultimate follow-up. Participants exhibited an average age of 32.48 years, with preoperative mean corneal high-order aberrations (CHOA) measuring 0.005 ± 0.036 μm.</p><h3>Methods</h3><p>A tracking trend analysis of high-order aberrations (HOAs) was conducted on the three groups of patients, assessing total corneal high-order aberrations after SMILE over periods of two, six, and twelve months.</p><h3>Results</h3><p>A substantial increase in total corneal high-order aberrations following SMILE, with a <i>P</i> value < 0.05. Conversely, there was a noteworthy and significant decrease in vertical trefoil for all groups (<i>P</i> value = 0.000). Interestingly, the corneal higher-order aberrations were more pronounced after two months compared to the six and twelve-month intervals. Spherical aberration demonstrated a significant increase with the extent of preoperative myopia and preoperative spherical equivalent both before and after SMILE surgery (<i>P</i> < 0.05), particularly in cases of high myopia. Moreover, there were significant reductions in preoperative and postoperative vertical coma (<i>P</i> = 0.047, <i>P</i> = 0.004, respectively) corresponding to the degree of preoperative myopia, with a more substantial decrease in vertical coma observed in cases of low myopia.</p><h3>Conclusion</h3><p>In the post-SMILE period, a notable increase in vertical coma and spherical aberrations was observed, accompanied by a significant decrease in vertical trefoil across all eyes. These aberration changes were identified to be closely associated with the spherical equivalent.</p></div>","PeriodicalId":481,"journal":{"name":"Beni-Suef University Journal of Basic and Applied Sciences","volume":"13 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bjbas.springeropen.com/counter/pdf/10.1186/s43088-024-00544-3","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142236093","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-12DOI: 10.1186/s43088-024-00549-y
Yasser Mostafa Gohary, Ebtehal Gamal Abdelhady, Aya Nagy Sayed, Laila Ahmed Rashed, Hanan Abd El Razik Kamel
Background
Vitiligo is classified as an acquired chronic depigmentation disorder that includes the destruction of epidermal melanocytes. It affects 0.5–1% of the population all over the world. Wnt signaling pathway is vital in melanocytes differentiation and development. WIF-1 is an antagonist of the Wnt signaling pathway; it hinders Wnt from binding its receptors. The present study aims to detect WIF-1 expression in vitiligo skin and if it relates to the disease's severity.
Results
This case–control study included 70 subjects: 35 vitiligo patients and 35 healthy controls. Skin WIF-1 expression was estimated using quantitative real-time PCR. Assessment of the vitiligo disease activity score and vitiligo area severity index score was determined. WIF-1 expression showed significant elevation in the skin of vitiligo patients compared to the healthy control group.
Conclusion
Overexpression of WIF-1 may participate in the pathogenesis of vitiligo; hence, it should be a future therapeutic target.
{"title":"Clinical study of Wnt inhibitory factor-1 expression and its association with disease severity in non-segmental vitiligo","authors":"Yasser Mostafa Gohary, Ebtehal Gamal Abdelhady, Aya Nagy Sayed, Laila Ahmed Rashed, Hanan Abd El Razik Kamel","doi":"10.1186/s43088-024-00549-y","DOIUrl":"10.1186/s43088-024-00549-y","url":null,"abstract":"<div><h3>Background</h3><p>Vitiligo is classified as an acquired chronic depigmentation disorder that includes the destruction of epidermal melanocytes. It affects 0.5–1% of the population all over the world. Wnt signaling pathway is vital in melanocytes differentiation and development. WIF-1 is an antagonist of the Wnt signaling pathway; it hinders Wnt from binding its receptors. The present study aims to detect WIF-1 expression in vitiligo skin and if it relates to the disease's severity.</p><h3>Results</h3><p>This case–control study included 70 subjects: 35 vitiligo patients and 35 healthy controls. Skin WIF-1 expression was estimated using quantitative real-time PCR. Assessment of the vitiligo disease activity score and vitiligo area severity index score was determined. WIF-1 expression showed significant elevation in the skin of vitiligo patients compared to the healthy control group.</p><h3>Conclusion</h3><p>Overexpression of WIF-1 may participate in the pathogenesis of vitiligo; hence, it should be a future therapeutic target.</p></div>","PeriodicalId":481,"journal":{"name":"Beni-Suef University Journal of Basic and Applied Sciences","volume":"13 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bjbas.springeropen.com/counter/pdf/10.1186/s43088-024-00549-y","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142169792","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-12DOI: 10.1186/s43088-024-00545-2
Leonny Dwi Rizkita, Rachma Greta Perdana Putri, Muhammad Farid, Muflihah Rizkawati, Pratiwi Wikaningtyas
Background
The increasing trend of antibiotic resistance has posed challenges for scientists, especially in developing better drug formulations. The discovery of new antibiotics could take years. Therefore, the management of an ideal drug delivery system has become a primary focus nowadays.
Main body of abstract
Almost all skin diseases could be treated with the administration of topical drugs, especially infectious skin diseases. The increasing cases of antimicrobial resistance require innovative strategies and actions. In dermatokinetics, achieving optimal drug concentrations in the deepest layers of skin tissue is a significant challenge. Human skin has remarkably complex characteristics, presenting a major obstacle in efficiently maintaining drug efficacy. Nanocarriers are an important part of nanomedicine which provide excellent drug penetration through various drug delivery systems. Lipid-based nanovesicles, such as liposome, are the oldest and most potential nanovesicles for such a purpose. Several studies have shown the efficacy of liposome-contained antibiotics and offered the lowest microbial inhibition concentration (MIC). It is suggested that liposome also delivers greater drug accumulation compared to blank drugs.
Short conclusion
Liposome is a flexible lipid-based drug delivery that enhances drug permeation through skin tissue by mimicking the lipid bilayer system of the organ. It is non-toxic, less immunogenic, and easily degraded by enzyme. The incorporation of liposome into antibiotics may reduce the inefficient drug dosage since the encapsulation will protect the active compounds prior to being released from the vehicle. Thus, the lowest MIC and less clinical side effects will be obtained.
Graphical abstract
背景抗生素耐药性不断增加的趋势给科学家带来了挑战,尤其是在开发更好的药物制剂方面。新抗生素的发现可能需要数年时间。摘要正文几乎所有皮肤病都可以通过局部用药治疗,尤其是传染性皮肤病。抗菌药耐药性的不断增加需要创新的策略和行动。在皮肤动力学中,如何在皮肤组织深层达到最佳药物浓度是一项重大挑战。人体皮肤具有非常复杂的特性,是有效保持药物疗效的一大障碍。纳米载体是纳米医学的重要组成部分,可通过各种给药系统提供出色的药物渗透性。脂质体等脂基纳米载体是最古老、最具潜力的纳米载体。多项研究表明,含有脂质体的抗生素疗效显著,微生物抑制浓度(MIC)最低。简短结论脂质体是一种基于脂质的灵活给药方式,它通过模拟器官的脂质双分子层系统来增强药物在皮肤组织中的渗透。它无毒、免疫原性低、易被酶降解。在抗生素中加入脂质体可以减少药物的低效用量,因为在活性化合物从载体中释放出来之前,脂质体的封装会对其起到保护作用。因此,可获得最低的 MIC 值和较少的临床副作用。
{"title":"Liposome drug delivery in combating the widespread topical antibiotic resistance: a narrative review","authors":"Leonny Dwi Rizkita, Rachma Greta Perdana Putri, Muhammad Farid, Muflihah Rizkawati, Pratiwi Wikaningtyas","doi":"10.1186/s43088-024-00545-2","DOIUrl":"10.1186/s43088-024-00545-2","url":null,"abstract":"<div><h3>Background</h3><p>The increasing trend of antibiotic resistance has posed challenges for scientists, especially in developing better drug formulations. The discovery of new antibiotics could take years. Therefore, the management of an ideal drug delivery system has become a primary focus nowadays.</p><h3>Main body of abstract</h3><p>Almost all skin diseases could be treated with the administration of topical drugs, especially infectious skin diseases. The increasing cases of antimicrobial resistance require innovative strategies and actions. In dermatokinetics, achieving optimal drug concentrations in the deepest layers of skin tissue is a significant challenge. Human skin has remarkably complex characteristics, presenting a major obstacle in efficiently maintaining drug efficacy. Nanocarriers are an important part of nanomedicine which provide excellent drug penetration through various drug delivery systems. Lipid-based nanovesicles, such as liposome, are the oldest and most potential nanovesicles for such a purpose. Several studies have shown the efficacy of liposome-contained antibiotics and offered the lowest microbial inhibition concentration (MIC). It is suggested that liposome also delivers greater drug accumulation compared to blank drugs.</p><h3>Short conclusion</h3><p>Liposome is a flexible lipid-based drug delivery that enhances drug permeation through skin tissue by mimicking the lipid bilayer system of the organ. It is non-toxic, less immunogenic, and easily degraded by enzyme. The incorporation of liposome into antibiotics may reduce the inefficient drug dosage since the encapsulation will protect the active compounds prior to being released from the vehicle. Thus, the lowest MIC and less clinical side effects will be obtained.</p><h3>Graphical abstract</h3><div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":481,"journal":{"name":"Beni-Suef University Journal of Basic and Applied Sciences","volume":"13 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bjbas.springeropen.com/counter/pdf/10.1186/s43088-024-00545-2","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142246693","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-06DOI: 10.1186/s43088-024-00548-z
Nermeen Bastawy, Ghada Farouk Soliman, Nermeen Bakr Sadek, Doaa Mostafa Gharib, Mai Abdelaziz Gouda, Laila Ahmed Rashed, Hanan Abdallah, Dina Hisham, Omnia Mohamed Abdel-Maksoud
Background
High fat-fructose diet is a proinflammatory diet that increases risk of hepatocytes and myocytes steatosis and fibrosis. Finding anti-inflammatory strategies to fight these harmful effects is paid attention to nowadays. This study compared the effects of two widely anti-inflammatory interventions—metformin and intermittent fasting on myocytes and hepatocyte injury induced by proinflammatory diet and tracking possible underlying mechanisms. In this work, rats fed high fat-fructose diet were subdivided into untreated group, treated by metformin, and/or intermittent fasting.
Results
Metformin (300 mg/kg/day) and intermittent fasting (3 days/week) specially their combination for 4 weeks showed significant improvement in insulin resistance, lipid profile, antioxidants (p < 0.05), as well as enhanced hepatocytes and myocytes repair and reduced collagen deposition through upregulation of mitophagy-related genes: PINK1, PARKIN, LAMP2, and PPAR-α (p < 0.05).
Conclusions
Intermittent fasting has beneficial metabolic and molecular therapeutic effects against proinflammatory diet-induced injury. Their results are like those of metformin sparing its adverse effects. Their combination showed additional effects against diet-induced myocytes and hepatocyte injury by upregulation of mitophagy-related genes without the need of increasing the dose of metformin.
{"title":"Metformin and intermittent fasting mitigate high fat-fructose diet-induced liver and skeletal muscle injury through upregulation of mitophagy genes in rats","authors":"Nermeen Bastawy, Ghada Farouk Soliman, Nermeen Bakr Sadek, Doaa Mostafa Gharib, Mai Abdelaziz Gouda, Laila Ahmed Rashed, Hanan Abdallah, Dina Hisham, Omnia Mohamed Abdel-Maksoud","doi":"10.1186/s43088-024-00548-z","DOIUrl":"10.1186/s43088-024-00548-z","url":null,"abstract":"<div><h3>Background</h3><p>High fat-fructose diet is a proinflammatory diet that increases risk of hepatocytes and myocytes steatosis and fibrosis. Finding anti-inflammatory strategies to fight these harmful effects is paid attention to nowadays. This study compared the effects of two widely anti-inflammatory interventions—metformin and intermittent fasting on myocytes and hepatocyte injury induced by proinflammatory diet and tracking possible underlying mechanisms. In this work, rats fed high fat-fructose diet were subdivided into untreated group, treated by metformin, and/or intermittent fasting.</p><h3>Results</h3><p>Metformin (300 mg/kg/day) and intermittent fasting (3 days/week) specially their combination for 4 weeks showed significant improvement in insulin resistance, lipid profile, antioxidants (<i>p</i> < 0.05), as well as enhanced hepatocytes and myocytes repair and reduced collagen deposition through upregulation of mitophagy-related genes: PINK1, PARKIN, LAMP2, and PPAR-α (<i>p</i> < 0.05).</p><h3>Conclusions</h3><p>Intermittent fasting has beneficial metabolic and molecular therapeutic effects against proinflammatory diet-induced injury. Their results are like those of metformin sparing its adverse effects. Their combination showed additional effects against diet-induced myocytes and hepatocyte injury by upregulation of mitophagy-related genes without the need of increasing the dose of metformin.</p><h3>Graphic abstract</h3><div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":481,"journal":{"name":"Beni-Suef University Journal of Basic and Applied Sciences","volume":"13 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-09-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bjbas.springeropen.com/counter/pdf/10.1186/s43088-024-00548-z","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142143860","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-05DOI: 10.1186/s43088-024-00542-5
Dada Modupeola, Popoola Patricia
Background
Laser metal deposition (LMD) is a widely used additive manufacturing technique for producing complex high entropy alloys with special properties for several applications. The AlCoCrFeNiCu HEAs compositional design has six elements with a configurational entropy of 1.79 R and atomic concentrations between 5 and 35%, so the HEA system is thermodynamically favorable according to Boltzmann’s theory, attributed to the core effects. However, the high-entropy alloy has dominant Body-Centered Cubic structures which may be too brittle to be examined in tension experimentally. Preheating the substrate before and during layer deposition could be a potential solution that is currently under development since tensile loading necessitates an understanding of a material's behavior under tension through an analysis of its yield and ultimate tensile strength. A computer-aided design (CAD) solid model was used to generate the near-net dog-bone form of the alloy with moderately complicated geometrical characteristics using laser metal deposition (LMD) technology. This study investigates a straightforward and effective computational model for simulating material properties, using COMSOL Multiphysics 5.4 software for laser-deposited high entropy alloys that are excessively brittle to be tested in tension. The AlCoCrFeNiCu high-entropy alloy "dog bone" test sample was modeled using COMSOL Multiphysics for tensile loading. The first principal stresses and longitudinal strain under axial loading conditions were measured using a three-dimensional (3D) structural mechanics’ model.
Results
The results showed the ultimate tensile strength is 8.47 N/m2, attributed to the high entropy effect and the dominant phase structure of the alloy.
Conclusion
Numerical models in this paper demonstrate the effect of stresses on the tensile behavior of the AlCoCrFeNiCu high-entropy alloy. The model optimizes the LMD process by analyzing residual stresses and predicting tensile strength, thus, providing insights that show the potential of high entropy alloys for structural integrity in aerospace applications.
{"title":"Optimizing the maximum strain of a laser-deposited high-entropy alloy using COMSOL multiphysics","authors":"Dada Modupeola, Popoola Patricia","doi":"10.1186/s43088-024-00542-5","DOIUrl":"10.1186/s43088-024-00542-5","url":null,"abstract":"<div><h3>Background</h3><p>Laser metal deposition (LMD) is a widely used additive manufacturing technique for producing complex high entropy alloys with special properties for several applications. The AlCoCrFeNiCu HEAs compositional design has six elements with a configurational entropy of 1.79 R and atomic concentrations between 5 and 35%, so the HEA system is thermodynamically favorable according to Boltzmann’s theory, attributed to the core effects. However, the high-entropy alloy has dominant Body-Centered Cubic structures which may be too brittle to be examined in tension experimentally. Preheating the substrate before and during layer deposition could be a potential solution that is currently under development since tensile loading necessitates an understanding of a material's behavior under tension through an analysis of its yield and ultimate tensile strength. A computer-aided design (CAD) solid model was used to generate the near-net dog-bone form of the alloy with moderately complicated geometrical characteristics using laser metal deposition (LMD) technology. This study investigates a straightforward and effective computational model for simulating material properties, using COMSOL Multiphysics 5.4 software for laser-deposited high entropy alloys that are excessively brittle to be tested in tension. The AlCoCrFeNiCu high-entropy alloy \"dog bone\" test sample was modeled using COMSOL Multiphysics for tensile loading. The first principal stresses and longitudinal strain under axial loading conditions were measured using a three-dimensional (3D) structural mechanics’ model.</p><h3>Results</h3><p>The results showed the ultimate tensile strength is 8.47 N/m<sup>2</sup>, attributed to the high entropy effect and the dominant phase structure of the alloy.</p><h3>Conclusion</h3><p>Numerical models in this paper demonstrate the effect of stresses on the tensile behavior of the AlCoCrFeNiCu high-entropy alloy. The model optimizes the LMD process by analyzing residual stresses and predicting tensile strength, thus, providing insights that show the potential of high entropy alloys for structural integrity in aerospace applications.</p></div>","PeriodicalId":481,"journal":{"name":"Beni-Suef University Journal of Basic and Applied Sciences","volume":"13 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bjbas.springeropen.com/counter/pdf/10.1186/s43088-024-00542-5","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142137627","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Metabolomics is the study of metabolites in cells, tissues, live organisms, and biological fluids to elucidate their composition and possible roles. Metabolomics and its biomarkers have emerged as a powerful tool for evaluating the efficacy of probiotics in various pathological conditions, including toxicological settings. This review explores the use of metabolomics-based markers to assess the safety and efficacy of probiotics in toxicological settings.
Result
This review aims to determine biomarkers for measuring the effectiveness of probiotic therapies in toxicological contexts based on exposure, effects, susceptibility, prognostic, and therapeutic biomarkers. In this study, 1979 articles were systematically searched in PubMed (PM), Scopus (Sc), Google Scholar (GS), and Web of Science (WOS) between the years 2013 and 2023 inclusive using keywords, inclusion, and exclusion criteria. The result showed that 1439 human samples were used from 2013 to 2023 publications with the UK having the highest number of publications, data, and sample types in 2023. Again, the result showed most of the publications are on susceptibility-based biomarkers.
Conclusion
Metabolomics-based biomarkers may provide insight into metabolism-related alterations related to probiotic therapies while clarifying their biological mechanisms, especially in toxicology enabling specific probiotic therapy.
{"title":"Metabolomics-based biomarkers of probiotic efficacy in toxicological settings","authors":"Declan Ikechukwu Emegano, Dilek Battal, Kumsal Kocadal","doi":"10.1186/s43088-024-00546-1","DOIUrl":"10.1186/s43088-024-00546-1","url":null,"abstract":"<div><h3>Background</h3><p>Metabolomics is the study of metabolites in cells, tissues, live organisms, and biological fluids to elucidate their composition and possible roles. Metabolomics and its biomarkers have emerged as a powerful tool for evaluating the efficacy of probiotics in various pathological conditions, including toxicological settings. This review explores the use of metabolomics-based markers to assess the safety and efficacy of probiotics in toxicological settings.</p><h3>Result</h3><p>This review aims to determine biomarkers for measuring the effectiveness of probiotic therapies in toxicological contexts based on exposure, effects, susceptibility, prognostic, and therapeutic biomarkers. In this study, 1979 articles were systematically searched in PubMed (PM), Scopus (Sc), Google Scholar (GS), and Web of Science (WOS) between the years 2013 and 2023 inclusive using keywords, inclusion, and exclusion criteria. The result showed that 1439 human samples were used from 2013 to 2023 publications with the UK having the highest number of publications, data, and sample types in 2023. Again, the result showed most of the publications are on susceptibility-based biomarkers.</p><h3>Conclusion</h3><p>Metabolomics-based biomarkers may provide insight into metabolism-related alterations related to probiotic therapies while clarifying their biological mechanisms, especially in toxicology enabling specific probiotic therapy.</p></div>","PeriodicalId":481,"journal":{"name":"Beni-Suef University Journal of Basic and Applied Sciences","volume":"13 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bjbas.springeropen.com/counter/pdf/10.1186/s43088-024-00546-1","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142137629","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-04DOI: 10.1186/s43088-024-00543-4
Eman H. Kandil, Hany A. Abd elSamie, Asmaa H. AbdElrahman, Amany E. Nofal
Background
Methotrexate (MTX), a drug utilized in cancer and rheumatoid arthritis treatment, is associated with acute and chronic neurodegenerative alterations. Spirulina platensis (SP) has several important phytochemical substances that act as free radical scavengers or natural antioxidants. The current study investigated the possible effects of the blue-green alga Spirulina platensis on cerebellar damage in male rats exposed to methotrexate. Forty (40) adult male albino rats were randomly divided into 4 groups (n = 10) and treated for one week: GI, the control group; GII was orally given 1000 mg SP/kg/daily, GIII was given a single intraperitoneal injection of MTX 75 mg/kg at the first day, and continued under the normal condition without other treatment till the end of the experiment, and GIV received both SP and MTX together with the same previous doses and duration. Neurobehavioral, histopathological, histochemical, immunohistochemical, ultrastructural, molecular, and biochemical data were recorded.
Results
MTX caused severe cerebellar degeneration in 3 cortical layers, especially the Purkinje layer. The Purkinje layer displayed a disrupted monolayer arrangement with pyknotic nuclei, a significant decrease in cell number, and shrunken cells surrounded by empty spaces. The molecular and granular layers are degenerated with elevated immunoreactions and gene expression of the glial fibrillary acidic protein (GFAP), ionized calcium-binding adapter molecule 1 (Iba-1), and neurofilament light chain antibody (NFL). Moreover, MTX significantly increased malondialdehyde (MDA) and myeloperoxidase (MPO) while decreasing the levels of reduced glutathione (GSH), serotonin, superoxide dismutase (SOD), acetylcholinesterase (ACHE), norepinephrine, and dopamine. These insults were noticeably mitigated by concomitant treatment with spirulina.
Conclusion
Spirulina improves neurological function by modulating the cerebellar damage elicited by MTX. This improvement may be attributed to the anti-inflammatory and antioxidant properties of spirulina.
{"title":"Evaluation of the ameliorative potency of spirulina platensis against cerebellar damage induced by methotrexate in male rats: histopathological, ultrastructural, molecular, and biochemical studies","authors":"Eman H. Kandil, Hany A. Abd elSamie, Asmaa H. AbdElrahman, Amany E. Nofal","doi":"10.1186/s43088-024-00543-4","DOIUrl":"10.1186/s43088-024-00543-4","url":null,"abstract":"<div><h3>Background</h3><p>Methotrexate (MTX), a drug utilized in cancer and rheumatoid arthritis treatment, is associated with acute and chronic neurodegenerative alterations. <i>Spirulina platensis</i> (SP) has several important phytochemical substances that act as free radical scavengers or natural antioxidants. The current study investigated the possible effects of the blue-green alga <i>Spirulina platensis</i> on cerebellar damage in male rats exposed to methotrexate. Forty (40) adult male albino rats were randomly divided into 4 groups (<i>n</i> = 10) and treated for one week: GI, the control group; GII was orally given 1000 mg SP/kg/daily, GIII was given a single intraperitoneal injection of MTX 75 mg/kg at the first day, and continued under the normal condition without other treatment till the end of the experiment, and GIV received both SP and MTX together with the same previous doses and duration. Neurobehavioral, histopathological, histochemical, immunohistochemical, ultrastructural, molecular, and biochemical data were recorded.</p><h3>Results</h3><p>MTX caused severe cerebellar degeneration in 3 cortical layers, especially the Purkinje layer. The Purkinje layer displayed a disrupted monolayer arrangement with pyknotic nuclei, a significant decrease in cell number, and shrunken cells surrounded by empty spaces. The molecular and granular layers are degenerated with elevated immunoreactions and gene expression of the glial fibrillary acidic protein (<i>GFAP)</i>, ionized calcium-binding adapter molecule 1 (<i>Iba-1)</i>, and neurofilament light chain antibody (<i>NFL)</i>. Moreover, MTX significantly increased malondialdehyde (MDA) and myeloperoxidase (MPO) while decreasing the levels of reduced glutathione (GSH), serotonin, superoxide dismutase (SOD), acetylcholinesterase (ACHE), norepinephrine, and dopamine. These insults were noticeably mitigated by concomitant treatment with spirulina.</p><h3>Conclusion</h3><p>Spirulina improves neurological function by modulating the cerebellar damage elicited by MTX. This improvement may be attributed to the anti-inflammatory and antioxidant properties of spirulina.</p></div>","PeriodicalId":481,"journal":{"name":"Beni-Suef University Journal of Basic and Applied Sciences","volume":"13 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bjbas.springeropen.com/counter/pdf/10.1186/s43088-024-00543-4","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142137628","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Today, several bioinformatics tools are available for analyzing restriction fragment length data. RFLP-kenzy is a new bioinformatic tool for identifying restriction key enzyme that cut at least 1 sequence and a maximum of n-1 sequence.
Results
This bioinformatic tool helps researchers to select appropriate enzymes that yield different RFLP patterns, especially from overly identical sequences with single nucleotide mutation or other small variations. By using RFLP-kenzy, multiple DNA sequences could be analyzed simultaneously and the key enzymes list is provided. The present paper also demonstrates the ability of RFLP-kenzy to identify the key enzymes through the analysis of 16S rRNA sequences and the complete genome of various genera of microorganisms.
Conclusion
From the results, several key enzymes were provided indicating the importance of this new tool in the selection of appropriate restriction enzymes.
背景如今,有多种生物信息学工具可用于分析限制性片段长度数据。RFLP-kenzy是一种新的生物信息学工具,用于识别至少能切割1个序列、最多能切割n-1个序列的限制性关键酶。结果这种生物信息学工具能帮助研究人员选择产生不同RFLP模式的适当酶,特别是从具有单核苷酸突变或其他微小变异的过于相同的序列中选择。使用 RFLP-kenzy 可以同时分析多个 DNA 序列,并提供关键酶列表。本文还通过分析 16S rRNA 序列和各种微生物属的完整基因组,证明了 RFLP-kenzy 识别关键酶的能力。
{"title":"RFLP-kenzy: a new bioinformatics tool for in silico detection of key restriction enzyme in RFLP technique","authors":"Nora Laref, Khadidja Belkheir, Mohamed Belazreg, Abdelhadi Hireche","doi":"10.1186/s43088-024-00531-8","DOIUrl":"10.1186/s43088-024-00531-8","url":null,"abstract":"<div><h3>Background</h3><p>Today, several bioinformatics tools are available for analyzing restriction fragment length data. RFLP-kenzy is a new bioinformatic tool for identifying restriction key enzyme that cut at least 1 sequence and a maximum of n-1 sequence.</p><h3>Results</h3><p>This bioinformatic tool helps researchers to select appropriate enzymes that yield different RFLP patterns, especially from overly identical sequences with single nucleotide mutation or other small variations. By using RFLP-kenzy, multiple DNA sequences could be analyzed simultaneously and the key enzymes list is provided. The present paper also demonstrates the ability of RFLP-kenzy to identify the key enzymes through the analysis of 16S rRNA sequences and the complete genome of various genera of microorganisms.</p><h3>Conclusion</h3><p>From the results, several key enzymes were provided indicating the importance of this new tool in the selection of appropriate restriction enzymes.</p></div>","PeriodicalId":481,"journal":{"name":"Beni-Suef University Journal of Basic and Applied Sciences","volume":"13 1","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-09-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bjbas.springeropen.com/counter/pdf/10.1186/s43088-024-00531-8","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142117929","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}