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The Muscle-Brain Axis in Aging: Mechanistic and Clinical Perspectives on Resistance Training and Cognitive Function. 衰老中的肌肉-脑轴:阻力训练和认知功能的机制和临床观点。
IF 3.5 3区 生物学 Q1 BIOLOGY Pub Date : 2026-01-15 DOI: 10.3390/biology15020154
Shuyun Yu, Yi Fan, Bochao You, Haoyue Zhang, Zhenghua Cai, Sai Zhang, Haili Tian

The global aging population has led to a rising prevalence of cognitive impairment, posing a significant public health challenge. Resistance training (RT) is a non-pharmacological intervention that has been increasingly investigated for its potential to support cognitive function in older adults. Clinical evidence suggests that RT may be associated with benefits in certain cognitive domains, including memory, executive function, processing speed, and visuospatial ability. However, findings across studies remain heterogeneous, with several trials reporting neutral outcomes. Most intervention studies involve structured RT programs conducted at moderate to high intensity and performed multiple times per week. However, optimal training parameters have not yet been clearly established due to variability in study design and the absence of formal dose-response analyses. Emerging evidence suggests that the cognitive effects of RT may be mediated, at least in part, through muscle-brain axis signaling involving exercise-induced myokines. Factors such as irisin, brain-derived neurotrophic factor, interleukin-6, interleukin-15, and insulin-like growth factor-1 have been implicated in processes related to neuroplasticity, neuroinflammatory regulation, and neurovascular function, primarily based on preclinical and translational research. This review synthesizes current evidence on RT-related molecular mechanisms and clinical findings to provide an integrative perspective on the potential role of resistance training in mitigating age-related cognitive decline.

全球人口老龄化导致认知障碍患病率上升,对公共卫生构成重大挑战。阻力训练(RT)是一种非药物干预手段,因其支持老年人认知功能的潜力而受到越来越多的研究。临床证据表明,RT可能与某些认知领域的益处有关,包括记忆、执行功能、处理速度和视觉空间能力。然而,不同研究的结果仍然存在差异,一些试验报告了中性结果。大多数干预研究涉及结构化的RT计划,以中等到高强度进行,每周进行多次。然而,由于研究设计的可变性和缺乏正式的剂量-反应分析,尚未明确确定最佳训练参数。新出现的证据表明,RT的认知作用可能至少部分是通过涉及运动诱导的肌因子的肌肉-脑轴信号传导介导的。鸢尾素、脑源性神经营养因子、白细胞介素-6、白细胞介素-15和胰岛素样生长因子-1等因子主要基于临床前和转化研究,与神经可塑性、神经炎症调节和神经血管功能相关的过程有关。这篇综述综合了目前关于抗阻训练相关分子机制和临床发现的证据,为抗阻训练在减轻年龄相关认知能力下降中的潜在作用提供了一个综合的视角。
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引用次数: 0
OsIPK2 Regulates Seed Vigor by Integrating IP6 Biosynthesis, Auxin Signaling, and H3K27me3 Deposition in Japonica Rice. OsIPK2通过整合IP6生物合成、生长素信号和H3K27me3沉积调控粳稻种子活力
IF 3.5 3区 生物学 Q1 BIOLOGY Pub Date : 2026-01-15 DOI: 10.3390/biology15020155
Yao Chen, Ya Li, Sihong Sang

Seed vigor is a key agronomic trait that integrates germination capacity and seedling establishment, critically influencing rice productivity. Inositol hexakisphosphate (IP6) serves as a major phosphorus reservoir in seeds, yet its regulatory mechanism in seed vigor remains unclear. Here, we demonstrate that exogenous IP6 application inhibited seed germination and seedling growth of japonica rice (Oryza sativa L. ssp. japonica cv. Zhonghua11) in a dose-dependent manner; 10 mM IP6 reduced seed germination by 100%, while 100 μM IP6 suppressed primary root length by 33.6% compared to the control. This inhibitory effect is likely mediated by antagonizing auxin signaling, as supported by suppressed DR5::GUS expression and altered transcription of auxin-responsive genes. OsIPK2, a key enzyme in IP6 biosynthesis, showed high expression during early development in rice. RNA interference of OsIPK2 led to a 40.8-61.7% reduction in seed IP6 content, 45.3-65% higher zinc (Zn) and iron (Fe) accumulation, and a 35.4-53.5% lower germination rate compared to wild-type (WT). Conversely, OsIPK2-RNAi seedlings exhibited enhanced growth and resistance to IP6, which was associated with misregulation of auxin-responsive genes and a decrease in the repressive histone mark H3K27me3 at their loci. Furthermore, endogenous indole-3-acetic acid (IAA) levels significantly reduced in Ri-1 but unchanged in Ri-2, while abscisic acid (ABA) content and the IAA/ABA ratio remained unaltered compared to wild-type. Our findings reveal that OsIPK2 balances seed vigor and seedling development by modulating inositol phosphate metabolism, auxin responses, and epigenetic regulation, providing insights for improving seed quality in cereals. Whether the regulatory role of OsIPK2 in seed vigor is conserved across other rice subspecies requires further investigation.

种子活力是集发芽能力和成苗能力于一体的重要农艺性状,对水稻产量有重要影响。六磷酸肌醇(IP6)是种子中主要的磷库,但其对种子活力的调控机制尚不清楚。本研究证明外源IP6对粳稻种子萌发和幼苗生长有抑制作用。粳稻的履历。以剂量依赖的方式;与对照相比,10 mM IP6使种子萌发率降低100%,100 μM IP6使主根长度降低33.6%。这种抑制作用可能是通过拮抗生长素信号传导介导的,并通过抑制DR5::GUS表达和改变生长素应答基因的转录来支持。OsIPK2是水稻IP6生物合成的关键酶,在水稻发育早期表现出高表达。RNA干扰OsIPK2导致种子IP6含量降低40.8 ~ 61.7%,锌和铁积累量增加45.3 ~ 65%,发芽率比野生型(WT)降低35.4 ~ 53.5%。相反,OsIPK2-RNAi幼苗表现出增强的生长和对IP6的抗性,这与生长素响应基因的错误调控和抑制组蛋白标记H3K27me3在其位点上的减少有关。此外,内源吲哚-3-乙酸(IAA)水平在Ri-1中显著降低,但在Ri-2中没有变化,而脱落酸(ABA)含量和IAA/ABA比值与野生型相比没有变化。我们的研究结果表明,OsIPK2通过调节肌醇磷酸盐代谢、生长素反应和表观遗传调控来平衡种子活力和幼苗发育,为提高谷物种子质量提供了新的思路。OsIPK2对种子活力的调控作用是否在其他水稻亚种中保守,还有待进一步研究。
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引用次数: 0
The Vulnerability of Chinese Theaceae Species Under Future Climate Change. 未来气候变化对中国山茱萸科植物脆弱性的影响
IF 3.5 3区 生物学 Q1 BIOLOGY Pub Date : 2026-01-15 DOI: 10.3390/biology15020151
Xuzhe Zhao, Junfeng Tang, Jiang Zhu, Lan Yao, Xunru Ai, Hongxia Xu, Guofei Ma, Jun Jiang, Huiliang Yu, Zunwei Ke

Assessing the vulnerability of species to climate change is currently one of the hot issues in ecology and conservation biology. Although species sensitivity and adaptability play a crucial role in determining species vulnerability to climate change, most studies have only focused on habitat exposure, hindering a comprehensive understanding of species vulnerability to climate change and the implementation of effective conservation actions and policies. Here, we performed a comprehensive evaluation of the species sensitivity, habitat exposure and vulnerability of 122 Chinese Theaceae species and the spatial distribution patterns of their sensitivity, habitat exposure and vulnerability, as well as the effectiveness of China's protected area network in protecting these species under future climate change. Our analyses suggest that species vulnerability was mainly determined by species sensitivity rather than habitat exposure. In addition, these species generally exhibit a high sensitivity and vulnerability to temperature-related variables, such as the annual mean temperature and temperature annual range, while exhibiting a high exposure to precipitation variables, such as total annual precipitation and precipitation seasonality. Furthermore, our analyses show that the high-vulnerability areas are mainly distributed in western and eastern China. However, no more than 17% of the high-vulnerability areas would be covered by China's protected area network and no more than 15% of the median- and low-vulnerability areas would be covered by China's protected area network. These findings can contribute to a new understanding of the vulnerability of the 122 Chinese Theaceae species to future climate change and guide effective conservation prioritizing in a rapidly changing climate.

物种对气候变化的脆弱性评估是当前生态学和保护生物学研究的热点问题之一。尽管物种敏感性和适应性在决定物种对气候变化的脆弱性中起着至关重要的作用,但大多数研究只关注栖息地暴露,阻碍了对物种对气候变化脆弱性的全面认识和有效保护行动和政策的实施。本文对122种山茱萸科植物的物种敏感性、生境暴露度和脆弱性进行了综合评价,分析了其敏感性、生境暴露度和脆弱性的空间分布格局,并对未来气候变化下中国山茱萸科植物保护区网络的保护效果进行了评价。我们的分析表明,物种脆弱性主要由物种敏感性而不是生境暴露决定。此外,这些物种对年平均气温和年温差等温度相关变量具有较高的敏感性和脆弱性,而对年总降水量和降水季节性等降水变量具有较高的暴露度。此外,我们的分析表明,高脆弱性地区主要分布在中国西部和东部。然而,中国保护区网络覆盖的高脆弱性区域不超过17%,中、低脆弱性区域不超过15%。这些发现有助于重新认识中国山茱萸科122种植物对未来气候变化的脆弱性,并指导在快速变化的气候条件下进行有效的优先保护。
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引用次数: 0
Effects of Elevated CO2 on Yield and Nutritional Quality of Kale and Spinach: A Meta-Analysis. CO2浓度升高对羽衣甘蓝和菠菜产量及营养品质影响的meta分析
IF 3.5 3区 生物学 Q1 BIOLOGY Pub Date : 2026-01-15 DOI: 10.3390/biology15020152
Jiata U Ekele, Joseph O Obaje, Susanne R K Zajitschek, Richard J Webster, Fatima Perez de Heredia, Katie E Lane, Abdulmannan Fadel, Rachael C Symonds

Elevated atmospheric CO2 is known to alter plant physiology, yet its specific effects on nutrient-rich leafy vegetables remain insufficiently quantified. This study aimed to examine how eCO2 influences yield and nutritional quality in kale (Brassica oleracea) and spinach (Spinacia oleracea) through the first meta-analysis focused exclusively on these crops. Following the Collaboration for Environmental Evidence (CEE) guidelines, we systematically reviewed eligible studies and conducted a random-effects meta-analysis to evaluate overall and subgroup responses based on CO2 concentration, crop type and exposure duration. Effect sizes were calculated using Hedges' g with 95% confidence intervals. The analysis showed that eCO2 significantly increased biomass in spinach (g = 1.21) and kale (g = 0.97). However, protein content declined in both crops (spinach: g = -0.76; kale: g = -0.61), and mineral concentrations, particularly calcium and magnesium, were reduced, with spinach exhibiting stronger nutrient losses overall. The variability in response across different CO2 concentrations and exposure times further underscores the complexity of eCO2 effects. These results highlight a trade-off between productivity and nutritional quality under future CO2 conditions. Addressing this challenge will require strategies such as targeted breeding programmes, biofortification, precision agriculture and improved sustainable agricultural practices to maintain nutrient density. This research provides critical evidence for policymakers and scientists to design sustainable food systems that safeguard public health in a changing climate.

众所周知,大气中二氧化碳的升高会改变植物的生理机能,但其对营养丰富的叶类蔬菜的具体影响仍未得到充分的量化。本研究旨在通过首个专门针对甘蓝(Brassica oleracea)和菠菜(Spinacia oleracea)的荟萃分析,研究eCO2如何影响这些作物的产量和营养品质。根据环境证据合作(CEE)指南,我们系统地回顾了符合条件的研究,并进行了随机效应荟萃分析,以评估基于二氧化碳浓度、作物类型和暴露时间的总体和亚组反应。效应量采用Hedges' g计算,置信区间为95%。分析表明,eCO2显著提高了菠菜(g = 1.21)和羽衣甘蓝(g = 0.97)的生物量。然而,这两种作物的蛋白质含量都下降了(菠菜:g = -0.76;羽衣甘蓝:g = -0.61),矿物质浓度,特别是钙和镁,都下降了,菠菜总体上表现出更严重的营养损失。不同CO2浓度和暴露时间的响应变异性进一步强调了eCO2效应的复杂性。这些结果强调了在未来二氧化碳条件下生产力和营养质量之间的权衡。应对这一挑战将需要有针对性的育种计划、生物强化、精准农业和改进的可持续农业实践等战略,以保持养分密度。这项研究为决策者和科学家设计可持续粮食系统提供了关键证据,在不断变化的气候中保障公众健康。
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引用次数: 0
Lipid Dependence of CYP3A4 Activity in Nanodiscs. 纳米圆盘中CYP3A4活性的脂质依赖性。
IF 3.5 3区 生物学 Q1 BIOLOGY Pub Date : 2026-01-15 DOI: 10.3390/biology15020156
Ilia G Denisov, Yelena V Grinkova, Stephen G Sligar

CYP3A4 is the main xenobiotic metabolizing enzyme in the human body, as it is in volved in metabolism of ~30% of drugs on the market as well as of many other compounds, from small molecules such as ethanol to large drugs such as erythromycin and cyclosporine [...].

CYP3A4是人体内主要的外源性代谢酶,它参与了市场上约30%的药物以及许多其他化合物的代谢,从小分子如乙醇到大分子如红霉素和环孢素[…]
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引用次数: 0
Sediment and Salinity Thresholds Govern Natural Recruitment of Manila Clam in the Xiaoqing River Estuary: Toward aPredictive Management Framework. 沉积物和盐度阈值控制小清河河口马尼拉蛤的自然繁殖:一个预测管理框架。
IF 3.5 3区 生物学 Q1 BIOLOGY Pub Date : 2026-01-15 DOI: 10.3390/biology15020157
Lulei Liu, Ang Li, Shoutuan Yu, Suyan Xue, Zirong Liu, Longzhen Liu, Ling Zhu, Jiaqi Li, Yuze Mao

Natural recruitment of Manila clam (Ruditapes philippinarum) often persists in degraded estuaries, yet the environmental thresholds enabling this resilience remain quantitatively undefined. We employed binomial generalized additive model (GAM) coupled with field surveys (n = 168) in the Xiaoqing River estuary (Laizhou Bay, China) to identify critical limits for adult occurrence, which served as a field-based proxy for recruitment potential. Sediment median grain size (D50), salinity (Sal) and dissolved inorganic nitrogen (DIN) were identified as the key factors, collectively explaining 79.30% of the deviance (AUC = 0.98). The probability of occurrence decreased sharply beyond two distinct thresholds: D50 > 95 μm and salinity < 17.50‱. While DIN had a positive effect, it did not offset the strong negative associations with coarse sediment or low salinity. These field-validated thresholds provide quantifiable criteria to guide habitat suitability mapping, activation of early-warning systems against salinity-driven mortality, and site prioritization for ecological restoration in the Xiaoqing River estuary. Our findings offer a framework for developing management strategies to support clam resilience under environmental stress.

马尼拉蛤(Ruditapes philippinarum)的自然繁殖在退化的河口经常持续存在,但使这种恢复力的环境阈值在数量上仍然不确定。本文采用二项广义加性模型(GAM),结合在莱州湾小清河河口(中国)的实地调查(n = 168),确定了成虫发生的临界极限,并以此作为野外招募潜力的代理。沉积物中位粒径(D50)、盐度(Sal)和溶解无机氮(DIN)是主要影响因子,共同解释了偏差的79.30% (AUC = 0.98)。在D50 ~ 95 μm和盐度< 17.50‰以上,出现概率急剧下降。虽然DIN有积极的影响,但它并不能抵消与粗沉积物或低盐度的强烈负相关。这些经过实地验证的阈值为指导小清河河口生境适宜性制图、盐碱度致死预警系统的启动以及生态恢复的选址优先排序提供了可量化的标准。我们的研究结果为开发管理策略提供了一个框架,以支持蛤在环境压力下的恢复力。
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引用次数: 0
Effects of Nutritional Supplementation on Tumor Growth: A Systematic Review and Meta-Analysis of Studies Using Animal Models of Mammary Cancer. 营养补充对肿瘤生长的影响:对乳腺癌动物模型研究的系统回顾和荟萃分析。
IF 3.5 3区 生物学 Q1 BIOLOGY Pub Date : 2026-01-14 DOI: 10.3390/biology15020150
Bruna Ribeiro-Silva, José Antônio Orellana Turri, Ricardo Dos Santos Simões, José Cipolla-Neto, Edmund Chada Baracat, José Maria Soares-Jr

Breast cancer remains the most prevalent malignancy among women worldwide, and experimental tumor models are essential for evaluating new therapeutic approaches before clinical application. The Walker-256 carcinoma model exhibits biological behavior comparable to human carcinoma and allows short-term assessment of tumor progression. This study aimed to conduct a systematic review and meta-analysis of the effects of dietary supplementation on Walker-256 tumor growth. We followed the PRISMA guidelines and searched the PubMed, Embase, and Cochrane databases without time restrictions. The meta-analysis included clustering based on the type of supplementation received, comparing treatment groups with control groups. Twenty-one studies were included, analyzing 18 different supplements, and 12 studies were considered for quantitative synthesis. The overall effect indicated a significant reduction in tumor growth with supplementation (SMD = 2.83, 95% CI = 1.99-3.66, p < 0.001), despite high heterogeneity (I2 = 93.3%). Oils had the greatest impact, particularly fish oil (SMD = 6.99, 95% CI = 3.15-10.83, p < 0.001) and shark liver oil (SMD = 4.43, 95% CI = 2.19-6.67, p < 0.01).

乳腺癌仍然是世界范围内女性中最常见的恶性肿瘤,在临床应用之前,实验肿瘤模型对于评估新的治疗方法至关重要。Walker-256癌症模型显示出与人类癌症相当的生物学行为,并允许对肿瘤进展进行短期评估。本研究旨在对膳食补充剂对Walker-256肿瘤生长的影响进行系统回顾和荟萃分析。我们遵循PRISMA指南,在没有时间限制的情况下检索PubMed、Embase和Cochrane数据库。荟萃分析包括基于补充类型的聚类,比较治疗组和对照组。纳入了21项研究,分析了18种不同的补充剂,其中12项研究被考虑用于定量综合。尽管异质性很高(I2 = 93.3%),但总体效果表明,补充后肿瘤生长显著降低(SMD = 2.83, 95% CI = 1.99-3.66, p < 0.001)。油脂的影响最大,尤其是鱼油(SMD = 6.99, 95% CI = 3.15-10.83, p < 0.001)和鱼肝油(SMD = 4.43, 95% CI = 2.19-6.67, p < 0.01)。
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引用次数: 0
Molecular Insights into Widespread Pseudouridine RNA Modifications: Implications for Women's Health and Disease. 广泛的假尿嘧啶RNA修饰的分子见解:对妇女健康和疾病的影响。
IF 3.5 3区 生物学 Q1 BIOLOGY Pub Date : 2026-01-14 DOI: 10.3390/biology15020142
Qiwei Yang, Ayman Al-Hendy, Thomas G Boyer

Pseudouridine (Ψ), the most abundant RNA modification, plays essential roles in shaping RNA structure, stability, and translational output. Beyond cancer, Ψ is dynamically regulated across numerous physiological and pathological contexts-including immune activation, metabolic disorders, stress responses, and pregnancy-related conditions such as preeclampsia-where elevated Ψ levels reflect intensified RNA turnover and modification activity. These broad functional roles highlight pseudouridylation as a central regulator of cellular homeostasis. Emerging evidence demonstrates that Ψ dysregulation contributes directly to the development and progression of several women's cancers, including breast, ovarian, endometrial, and cervical malignancies. Elevated Ψ levels in tissues, blood, and urine correlate with tumor burden, metastatic potential, and therapeutic responsiveness. Aberrant activity of Ψ synthases such as PUS1, PUS7, and the H/ACA ribonucleoprotein component dyskerin alters pseudouridylation patterns across multiple RNA substrates, including rRNA, tRNA, mRNA, lncRNAs, snoRNAs, and ncRNAs. These widespread modifications reshape ribosome function, modify transcript stability and translational efficiency, reprogram RNA-protein interactions, and activate oncogenic signaling programs. Advances in high-resolution, site-specific Ψ mapping technologies have further revealed mechanistic links between pseudouridylation and malignant transformation, highlighting how modification of distinct RNA classes contributes to altered cellular identity and tumor progression. Collectively, Ψ and its modifying enzymes represent promising biomarkers and therapeutic targets across women's cancers, while also serving as sensitive indicators of diverse non-cancer physiological and disease states.

伪尿嘧啶(Ψ)是最丰富的RNA修饰,在塑造RNA结构、稳定性和翻译输出中起着至关重要的作用。除了癌症之外,Ψ还在许多生理和病理环境中受到动态调节,包括免疫激活、代谢紊乱、应激反应和妊娠相关疾病,如子痫前期,其中Ψ水平升高反映了RNA转换和修饰活性的增强。这些广泛的功能作用突出了假尿嘧啶化作为细胞稳态的中心调节器。越来越多的证据表明Ψ失调直接导致了几种女性癌症的发生和发展,包括乳腺癌、卵巢癌、子宫内膜癌和宫颈恶性肿瘤。组织、血液和尿液中Ψ水平升高与肿瘤负荷、转移潜力和治疗反应性相关。Ψ合成酶如PUS1、PUS7和H/ACA核糖核蛋白成分dyskerin的异常活性改变了多种RNA底物的假尿嘧啶化模式,包括rRNA、tRNA、mRNA、lncRNAs、snoRNAs和ncRNAs。这些广泛的修饰重塑了核糖体的功能,改变了转录物的稳定性和翻译效率,重新编程了rna -蛋白质的相互作用,并激活了致癌信号程序。高分辨率、位点特异性Ψ制图技术的进步进一步揭示了假尿嘧啶化与恶性转化之间的机制联系,强调了不同RNA类别的修饰如何有助于改变细胞身份和肿瘤进展。总的来说,Ψ及其修饰酶代表了女性癌症中有希望的生物标志物和治疗靶点,同时也作为各种非癌症生理和疾病状态的敏感指标。
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引用次数: 0
Immune Determinants of MASLD Progression: From Immunometabolic Reprogramming to Fibrotic Transformation. MASLD进展的免疫决定因素:从免疫代谢重编程到纤维化转化。
IF 3.5 3区 生物学 Q1 BIOLOGY Pub Date : 2026-01-14 DOI: 10.3390/biology15020148
Senping Xu, Zhaoshan Zhang, Zhongquan Zhou, Jiawei Guo

Metabolic dysfunction-associated steatotic liver disease (MASLD) represents a progressive spectrum of metabolic liver injury in which immune activation, metabolic stress, and stromal remodeling evolve in a tightly interdependent manner. Although early disease stages are dominated by metabolic overload, accumulating evidence indicates that immunometabolic rewiring and fibro-inflammatory amplification critically shape the transition toward metabolic dysfunction-associated steatohepatitis (MASH) and advanced fibrosis. This review synthesizes emerging insights into how hepatocyte stress responses, innate and adaptive immune circuits, and extracellular matrix-producing stromal populations interact to form a dynamic, feed-forward network driving disease progression. Particular emphasis is placed on the deterministic role of immune-fibrotic coupling in shaping clinical phenotypes, disease trajectory, and therapeutic responsiveness. Rather than focusing on individual molecular layers, we highlight how integrated clinical, imaging, and biomarker-informed frameworks can capture immune-fibrotic signatures relevant to risk stratification and precision intervention. Building on this systems-level perspective, we outline next-generation therapeutic strategies targeting immunometabolic circuits, cross-organ communication, and multi-system dysfunction. Finally, we discuss how future precision medicine-supported by integrative biomarker profiling and dynamic physiological assessment-may reshape MASLD management and improve long-term hepatic and cardiometabolic outcomes.

代谢功能障碍相关的脂肪变性肝病(MASLD)代表了代谢性肝损伤的进行性谱,其中免疫激活、代谢应激和基质重塑以一种紧密相互依赖的方式进化。尽管疾病早期阶段以代谢负荷为主,但越来越多的证据表明,免疫代谢重新布线和纤维炎症扩增对代谢功能障碍相关脂肪性肝炎(MASH)和晚期纤维化的转变至关重要。这篇综述综合了关于肝细胞应激反应、先天和适应性免疫回路以及细胞外基质产生基质群体如何相互作用形成一个驱动疾病进展的动态前馈网络的新见解。特别强调的是免疫-纤维化耦合在塑造临床表型、疾病轨迹和治疗反应性中的决定性作用。而不是专注于单个分子层,我们强调如何整合临床、成像和生物标志物信息框架可以捕获与风险分层和精确干预相关的免疫纤维化特征。基于这种系统水平的观点,我们概述了针对免疫代谢回路、跨器官通信和多系统功能障碍的下一代治疗策略。最后,我们讨论了在综合生物标志物分析和动态生理评估的支持下,未来的精准医学如何重塑MASLD的管理,并改善长期的肝脏和心脏代谢结果。
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引用次数: 0
Catalytic Tunnel Dynamics Explain Functional Divergence of FAD2 Homologs Underlying the Oleic-to-Linoleic Ratio in Cornus wilsoniana. 催化隧道动力学解释山茱萸中FAD2同源物的功能分化。
IF 3.5 3区 生物学 Q1 BIOLOGY Pub Date : 2026-01-14 DOI: 10.3390/biology15020145
Wenyan Yuan, Wei Wu, Shushan Jia, Yunzhu Chen, Peiwang Li, Yan Yang, Lijuan Jiang, Qiang Liu, Li Li, Wenbin Zeng, Xiao Zhou, Jingzhen Chen

The oleic-to-linoleic acid ratio (O/L) is a key determinant of oil quality, yet its molecular basis in Cornus wilsoniana remains unclear. Here, we combined fatty-acid profiling with molecular dynamics (MD) simulations and catalytic tunnel analysis to compare four annotated FAD2 homologs. Sequence alignment revealed a major variable segment at residues 160-185, including a small deletion in CW09G04700 and an extensive deletion in CW04G07690. Docking against oleic acid supported excluding CW04G07690 due to weak binding. Eighty-nanosecond MD simulations showed that CW02G01750 and CW09G27260 rapidly converged to stable conformational ensembles with lower core flexibility, whereas CW09G04700 exhibited higher internal mobility around residues 180-220. CAVER analysis further indicated increasingly accessible catalytic tunnels for CW02G01750 and CW09G27260 during simulation, while CW09G04700 displayed transient tunnel narrowing accompanied by ligand conformational readjustments. These results nominate CW02G01750 as a leading structural candidate among C. wilsoniana FAD2 homologs and highlight access-pathway dynamics as a mechanistic feature potentially contributing to O/L formation.

油酸与亚油酸的比值(O/L)是油质的关键决定因素,但其分子基础尚不清楚。在这里,我们将脂肪酸分析与分子动力学(MD)模拟和催化隧道分析相结合,比较了四个注释的FAD2同源物。序列比对显示,在残基160-185处有一个主要的可变片段,包括CW09G04700的小缺失和CW04G07690的大缺失。支持与油酸对接,不包括CW04G07690,由于弱结合。80纳秒MD模拟表明,CW02G01750和CW09G27260快速收敛为稳定的构象群,核心柔韧性较低,而CW09G04700在残基180-220附近具有较高的内部迁移率。CAVER分析进一步表明,在模拟过程中,CW02G01750和CW09G27260的催化通道越来越容易进入,而CW09G04700则表现出短暂的通道狭窄,同时伴随着配体构象的调整。这些结果表明,CW02G01750是威尔逊娜FAD2同源物中的主要候选结构,并强调了通路动力学是可能促进O/L形成的机制特征。
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引用次数: 0
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Biology-Basel
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