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Correlation-based hierarchical clustering of time series with spatial constraints 基于相关性的时间序列分层聚类与空间约束
IF 2.3 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2023-11-30 DOI: 10.1016/j.spasta.2023.100797
Alessia Benevento, Fabrizio Durante

Correlation-based hierarchical clustering methods for time series typically are based on a suitable dissimilarity matrix derived from pairwise measures of association. Here, this dissimilarity is modified in order to take into account the presence of spatial constraints. This modification exploits the geometric structure of the space of correlation matrices, i.e. their Riemannian manifold. Specifically, the temporal correlation matrix (based on van der Waerden coefficient) is aggregated to the spatial correlation matrix (obtained from a suitable Matérn correlation function) via a geodesic in the Riemannian manifold. Our approach is presented and discussed using simulated and real data, highlighting its main advantages and computational aspects.

基于相关性的时间序列分层聚类方法通常是基于一个合适的异质性矩阵,该矩阵由成对的关联测量得出。在这里,为了考虑到空间限制的存在,对这种不相似性进行了修改。这种修改利用了相关矩阵空间的几何结构,即它们的黎曼流形。具体来说,时间相关矩阵(基于范德瓦登系数)通过黎曼流形中的大地线聚合到空间相关矩阵(通过合适的马特恩相关函数获得)。我们利用模拟数据和真实数据介绍并讨论了我们的方法,强调了其主要优势和计算方面的问题。
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引用次数: 0
A criterion and incremental design construction for simultaneous kriging predictions 同步克里金预测的标准和增量设计结构
IF 2.3 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2023-11-29 DOI: 10.1016/j.spasta.2023.100798
Helmut Waldl , Werner G. Müller , Paula Camelia Trandafir

In this paper, we further investigate the problem of selecting a set of design points for universal kriging, which is a widely used technique for spatial data analysis. Our goal is to select the design points in order to make simultaneous predictions of the random variable of interest at a finite number of unsampled locations with maximum precision. Specifically, we consider as response a correlated random field given by a linear model with an unknown parameter vector and a spatial error correlation structure. We propose a new design criterion that aims at simultaneously minimizing the variation of the prediction errors at various points. We also present various efficient techniques for incrementally building designs for that criterion scaling well for high dimensions. Thus the method is particularly suitable for big data applications in areas of spatial data analysis such as mining, hydrogeology, natural resource monitoring, and environmental sciences or equivalently for any computer simulation experiments. We have demonstrated the effectiveness of the proposed designs through two illustrative examples: one by simulation and another based on real data from Upper Austria.

通用克里金法是一种广泛应用于空间数据分析的技术,在本文中,我们将进一步研究为通用克里金法选择一组设计点的问题。我们的目标是选择设计点,以便在有限数量的未采样位置上以最大精度同时预测相关随机变量。具体来说,我们将一个线性模型给出的相关随机场视为响应,该模型具有未知参数向量和空间误差相关结构。我们提出了一种新的设计准则,旨在同时最小化各点预测误差的变化。我们还提出了各种高效技术,用于增量构建该准则的设计,并能很好地扩展到高维度。因此,该方法特别适用于空间数据分析领域的大数据应用,如采矿、水文地质学、自然资源监测和环境科学,或等同于任何计算机模拟实验。我们通过两个示例证明了建议设计的有效性:一个是模拟设计,另一个是基于上奥地利州的真实数据。
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引用次数: 0
Computationally efficient localised spatial smoothing of disease rates using anisotropic basis functions and penalised regression fitting 利用各向异性基函数和惩罚回归拟合,计算效率高的疾病率局部空间平滑
IF 2.3 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2023-11-29 DOI: 10.1016/j.spasta.2023.100796
Duncan Lee

The spatial variation in population-level disease rates can be estimated from aggregated disease data relating to N areal units using Bayesian hierarchical models. Spatial autocorrelation in these data is captured by random effects that are assigned a Conditional autoregressive (CAR) prior, which assumes that neighbouring areal units exhibit similar disease rates. This approach ignores boundaries in the disease rate surface, which are locations where neighbouring units exhibit a step-change in their rates. CAR type models have been extended to account for this localised spatial smoothness, but they are computationally prohibitive for big data sets. Therefore this paper proposes a novel computationally efficient approach for localised spatial smoothing, which is motivated by a new study of mental ill health across N=32,754 Lower Super Output Areas in England. The approach is based on a computationally efficient ridge regression framework, where the spatial trend in disease rates is modelled by a set of anisotropic spatial basis functions that can exhibit either smooth or step change transitions in values between neighbouring areal units. The efficacy of this approach is evidenced by simulation, before using it to identify the highest rate areas and the magnitude of the health inequalities in four measures of mental ill health, namely antidepressant usage, benefit claims, depression diagnoses and hospitalisations.

使用贝叶斯层次模型,可以从与N个区域单位相关的汇总疾病数据中估计人口水平疾病发病率的空间变化。这些数据中的空间自相关性是通过分配条件自回归(CAR)先验的随机效应捕获的,它假设邻近的区域单位表现出相似的发病率。这种方法忽略了发病率表面的边界,即相邻单位在其发病率上表现出阶梯变化的位置。CAR类型的模型已经扩展到考虑这种局部空间平滑,但它们在计算上对大数据集是禁止的。因此,本文提出了一种新的计算高效的局部空间平滑方法,这是由一项关于英国N=32,754个低超级输出区域的精神疾病健康的新研究激发的。该方法以计算效率高的脊回归框架为基础,其中发病率的空间趋势由一组各向异性空间基函数模拟,这些函数可以在相邻面积单位之间表现出平滑或阶跃变化的值转换。这种方法的有效性通过模拟得到证明,然后用它来确定精神疾病的四种衡量标准(即抗抑郁药的使用、福利申请、抑郁症诊断和住院治疗)中发病率最高的地区和健康不平等的程度。
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引用次数: 0
Locally adaptive spatial quantile smoothing: Application to monitoring crime density in Tokyo 局部自适应空间分位数平滑:在东京犯罪密度监测中的应用
IF 2.3 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2023-11-18 DOI: 10.1016/j.spasta.2023.100793
Takahiro Onizuka , Shintaro Hashimoto , Shonosuke Sugasawa

Spatial trend estimation under potential heterogeneity is an important problem to extract spatial characteristics and hazards such as criminal activity. By focusing on quantiles, which provide substantial information on distributions compared with commonly used summary statistics such as means, it is often useful to estimate not only the average trend but also the high (low) risk trend additionally. In this paper, we propose a Bayesian quantile trend filtering method to estimate the non-stationary trend of quantiles on graphs and apply it to crime data in Tokyo between 2013 and 2017. By modeling multiple observation cases, we can estimate the potential heterogeneity of spatial crime trends over multiple years in the application. To induce locally adaptive Bayesian inference on trends, we introduce general shrinkage priors for graph differences. Introducing so-called shadow priors with multivariate distribution for local scale parameters and mixture representation of the asymmetric Laplace distribution, we provide a simple Gibbs sampling algorithm to generate posterior samples. The numerical performance of the proposed method is demonstrated through simulation studies.

潜在异质性下的空间趋势估计是提取空间特征和犯罪活动等危害的重要问题。与常用的汇总统计(如均值)相比,分位数提供了关于分布的大量信息,通过关注分位数,不仅可以估计平均趋势,还可以估计高(低)风险趋势。本文提出了一种贝叶斯分位数趋势过滤方法来估计图上分位数的非平稳趋势,并将其应用于东京2013 - 2017年的犯罪数据。通过对多个观测案例进行建模,我们可以估计应用中多年空间犯罪趋势的潜在异质性。为了诱导对趋势的局部自适应贝叶斯推断,我们为图的差异引入了一般收缩先验。引入局部尺度参数多元分布的阴影先验和非对称拉普拉斯分布的混合表示,给出了一种简单的Gibbs抽样算法来生成后验样本。通过仿真研究验证了该方法的数值性能。
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引用次数: 0
An object-oriented approach to the analysis of spatial complex data over stream-network domains 流-网络域空间复杂数据分析的面向对象方法
IF 2.3 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2023-11-13 DOI: 10.1016/j.spasta.2023.100784
Chiara Barbi, Alessandra Menafoglio, Piercesare Secchi

We address the problem of spatial prediction for Hilbert data, when their spatial domain of observation is a river network. The reticular nature of the domain requires to use geostatistical methods based on the concept of Stream Distance, which captures the spatial connectivity of the points in the river induced by the network branching. Within the framework of Object Oriented Spatial Statistics (O2S2), where the data are considered as points of an appropriate (functional) embedding space, we develop a class of functional moving average models based on the Stream Distance. Both the geometry of the data and that of the spatial domain are thus taken into account. A consistent definition of covariance structure is developed, and associated estimators are studied. Through the analysis of the summer water temperature profiles in the Middle Fork River (Idaho, USA), our methodology proved to be effective, both in terms of covariance structure characterization and forecasting performance.

我们解决了希尔伯特数据的空间预测问题,当他们的观测空间域是一个河网。该领域的网状性质要求使用基于流距离概念的地质统计学方法,该方法捕获由网络分支引起的河流中点的空间连通性。在面向对象空间统计(O2S2)的框架内,将数据视为适当(功能)嵌入空间的点,我们开发了一类基于流距离的功能移动平均模型。因此,数据的几何形状和空间域的几何形状都被考虑在内。给出了协方差结构的一致定义,并研究了相关估计量。通过对中叉河(美国爱达荷州)夏季水温剖面的分析,我们的方法在协方差结构表征和预测性能方面都证明是有效的。
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引用次数: 0
Data-driven modeling of wildfire spread with stochastic cellular automata and latent spatio-temporal dynamics 基于随机元胞自动机和潜在时空动力学的野火传播数据驱动模型
IF 2.3 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2023-11-10 DOI: 10.1016/j.spasta.2023.100794
Nicholas Grieshop, Christopher K. Wikle

We propose a Bayesian stochastic cellular automata modeling approach to model the spread of wildfires with uncertainty quantification. The model considers a dynamic neighborhood structure that allows neighbor states to inform transition probabilities in a multistate categorical model. Additional spatial information is captured by the use of a temporally evolving latent spatio-temporal dynamic process linked to the original spatial domain by spatial basis functions. The Bayesian construction allows for uncertainty quantification associated with each of the predicted fire states. The approach is applied to a heavily instrumented controlled burn.

本文提出了一种贝叶斯随机元胞自动机建模方法,以不确定性量化野火的蔓延。该模型考虑了一种动态邻域结构,允许邻域状态通知多状态分类模型中的转移概率。附加的空间信息是通过空间基函数与原始空间域相关联的时间演变的潜在时空动态过程来捕获的。贝叶斯构造允许与每个预测的火灾状态相关联的不确定性量化。该方法应用于重度仪器控制烧伤。
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引用次数: 1
A spatial model with vaccinations for COVID-19 in South Africa 南非COVID-19疫苗接种的空间模型
IF 2.3 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2023-11-09 DOI: 10.1016/j.spasta.2023.100792
Claudia Dresselhaus , Inger Fabris-Rotelli , Raeesa Manjoo-Docrat , Warren Brettenny , Jenny Holloway , Nada Abdelatif , Renate Thiede , Pravesh Debba , Nontembeko Dudeni-Tlhone

Since the emergence of the novel COVID-19 virus pandemic in December 2019, numerous mathematical models were published to assess the transmission dynamics of the disease, predict its future course, and evaluate the impact of different control measures. The simplest models make the basic assumptions that individuals are perfectly and evenly mixed and have the same social structures. Such assumptions become problematic for large developing countries that aggregate heterogeneous COVID-19 outbreaks in local areas. Thus, this paper proposes a spatial SEIRDV model that includes spatial vaccination coverage, spatial vulnerability, and level of mobility, to take into account the spatial–temporal clustering pattern of COVID-19 cases. The conclusion of this study is that immunity, government interventions, infectiousness and virulence are the main drivers of the spread of COVID-19. These factors should be taken into consideration when scientists, public policy makers and other stakeholders in the health community analyse, create and project future disease prevention scenarios. Such a model has a place for disease outbreaks that may occur in future, allowing for the inclusion of vaccination rates in a spatial manner.

自2019年12月新型冠状病毒病(COVID-19)大流行出现以来,人们发布了许多数学模型,以评估该疾病的传播动态,预测其未来进程,并评估不同控制措施的影响。最简单的模型做出了基本的假设,即个体是完全均匀混合的,具有相同的社会结构。这种假设对于在地方地区聚集异质COVID-19疫情的大型发展中国家来说是有问题的。为此,本文提出了考虑COVID-19病例时空聚类模式的空间SEIRDV模型,该模型包括空间疫苗接种覆盖率、空间脆弱性和流动性水平。本研究的结论是,免疫、政府干预、传染性和毒性是COVID-19传播的主要驱动因素。当科学家、公共决策者和卫生界的其他利益相关者分析、创建和预测未来的疾病预防情景时,应该考虑到这些因素。这种模型考虑到未来可能发生的疾病暴发,允许以空间方式纳入疫苗接种率。
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引用次数: 0
General spatial model meets adaptive shrinkage generalized moment estimation: Simultaneous model and moment selection 广义空间模型满足自适应收缩广义矩估计:模型和矩的同步选择
IF 2.3 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2023-11-07 DOI: 10.1016/j.spasta.2023.100791
Yunquan Song, Yaqi Liu, Xiaodi Zhang, Yuanfeng Wang

Spatial data are widely used in various scenarios of life and are highly valued, and their analysis and research have achieved remarkable results. Spatial data have spatial effects and do not satisfy the assumption of independence; thus, the traditional econometric analysis methods cannot be directly used in spatial models, and the spatial autocorrelation and spatial heterogeneity of spatial data make the research more complicated and difficult. Generalized moment estimation(GMM) is a powerful tool for statistical modeling and inference of spatial data. Considering the case where there is a set of correctly specified moment conditions and another set of possibly misspecified moment conditions for spatial data, this paper proposes a GMM shrinkage method to estimate the unknown parameters for spatial autoregressive model with spatial autoregressive disturbances. The proposed GMM estimators are shown to enjoy oracle properties; i.e., it selects the valid moment conditions consistently from the candidate set and includes them into estimation automatically. The resulting estimator is asymptotically as efficient as the GMM estimator based on all valid moment conditions. Monte Carlo studies show that the method works well in terms of valid moment selection and the finite sample properties of its estimators.

空间数据广泛应用于生活的各个场景,受到人们的高度重视,对空间数据的分析和研究取得了显著的成果。空间数据具有空间效应,不满足独立性假设;因此,传统的计量分析方法不能直接用于空间模型,空间数据的空间自相关性和空间异质性使研究更加复杂和困难。广义矩估计(GMM)是空间数据统计建模和推理的有力工具。针对空间数据存在一组正确指定的力矩条件和另一组可能不正确指定的力矩条件的情况,提出了一种估计具有空间自回归扰动的空间自回归模型未知参数的GMM收缩方法。所提出的GMM估计器被证明具有oracle特性;即,它从候选集中一致地选择有效的矩条件,并将其自动纳入估计。所得估计量与基于所有有效矩条件的GMM估计量渐近相同。蒙特卡罗研究表明,该方法在有效矩选择和估计量的有限样本特性方面具有良好的效果。
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引用次数: 0
Geographically Weighted Zero-Inflated Negative Binomial Regression: A general case for count data 地理加权零膨胀负二项回归:计数数据的一般情况
IF 2.3 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2023-11-04 DOI: 10.1016/j.spasta.2023.100790
Alan Ricardo da Silva, Marcos Douglas Rodrigues de Sousa

Poisson and Negative Binomial Regression Models are often used to describe the relationship between a count dependent variable and a set of independent variables. However, these models fail to analyze data with an excess of zeros, being Zero-Inflated Poisson (ZIP) and Zero-Inflated Negative Binomial (ZINB) models the most appropriate to fit this kind of data. To Incorporate the spatial dimension into the count data models, Geographically Weighted Poisson Regression (GWPR), Geographically Weighted Negative Binomial Regression (GWNBR) and Geographically Weighted Zero-Inflated Poisson Regression (GWZIPR) have been developed, but the zero-inflation part of the negative binomial distribution is undeveloped in order to incorporate the overdispersion and the excess of zeros, as was at the beginning of the COVID-19 pandemic, whereas some places were having an outbreak of cases and in others places, there were no cases yet. Therefore, we propose a Geographically Weighted Zero-Inflated Negative Binomial Regression (GWZINBR) model which can be considered a general case for count data, since locally it can become a GWZIPR, GWNBR or a GWPR model. We applied this model to simulated data and to the cases of COVID-19 in South Korea at the beginning of the pandemic in 2020 and the results showed a better understanding of the phenomenon compared to the GWNBR model.

泊松和负二项回归模型常用于描述一个计数因变量和一组自变量之间的关系。然而,这些模型不能分析超过零的数据,零膨胀泊松(ZIP)和零膨胀负二项(ZINB)模型最适合拟合这类数据。为了将空间维度纳入计数数据模型,我们开发了地理加权泊松回归(GWPR)、地理加权负二项回归(GWNBR)和地理加权零膨胀泊松回归(GWZIPR),但为了将过度分散和零过剩(如COVID-19大流行开始时)纳入,负二项分布的零膨胀部分尚未开发。一些地方出现了病例爆发,而另一些地方还没有出现病例。因此,我们提出了一个地理加权零膨胀负二项回归(GWZINBR)模型,它可以被认为是计数数据的一般情况,因为局部它可以成为GWZIPR, GWNBR或GWPR模型。我们将该模型应用于模拟数据和2020年大流行初期韩国的COVID-19病例,结果显示,与GWNBR模型相比,该模型对这一现象有了更好的理解。
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引用次数: 0
Review of Sujit Sahu’s “Bayesian modeling of spatio-temporal data with R” Sujit Sahu“时空数据的贝叶斯建模与R”综述
IF 2.3 2区 数学 Q3 GEOSCIENCES, MULTIDISCIPLINARY Pub Date : 2023-10-31 DOI: 10.1016/j.spasta.2023.100788
Patrick E. Brown
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引用次数: 0
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