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Enhanced immune evasion of SARS-CoV-2 variants KP.3.1.1 and XEC through N-terminal domain mutations 通过 N 端结构域突变增强 SARS-CoV-2 变体 KP.3.1.1 和 XEC 的免疫逃避能力
IF 56.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-22 DOI: 10.1016/s1473-3099(24)00738-2
Jingyi Liu, Yuanling Yu, Fanchong Jian, Sijie Yang, Weiliang Song, Peng Wang, Lingling Yu, Fei Shao, Yunlong Cao
No Abstract
无摘要
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引用次数: 0
Overcoming the global tuberculosis crisis with urgent country-level political and financial action 采取国家一级的紧急政治和财政行动,战胜全球结核病危机
IF 56.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-19 DOI: 10.1016/s1473-3099(24)00748-5
Suvanand Sahu, Lucica Ditiu, Rizwan Ahmed, Adam Zumla, Eleni Aklillu, Urvashi B Singh, Dorothy Yeboah-Manu, Danny Asogun, David S Hui, Alimuddin Zumla
No Abstract
无摘要
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引用次数: 0
DoxyPEP: real-life effectiveness in a cohort of men who have sex with men in Milan, Italy DoxyPEP:在意大利米兰男男性行为者群体中的实际效果
IF 56.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-19 DOI: 10.1016/s1473-3099(24)00726-6
Angelo Roberto Raccagni, Sara Diotallevi, Riccardo Lolatto, Elena Bruzzesi, Gaia Catalano, Ilaria Mainardi, Chiara Maci, Caterina Candela, Camilla Muccini, Antonella Castagna, Silvia Nozza
No Abstract
无摘要
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引用次数: 0
Nipah virus research priorities: who sets them and for whom? 尼帕病毒研究的优先事项:由谁来确定?
IF 56.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-18 DOI: 10.1016/s1473-3099(24)00765-5
Md Zakiul Hassan, Anoop Kumar A S, Abu Faisal Md Pervez, Tahmina Shirin
No Abstract
无摘要
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引用次数: 0
Probing Oropouche fever ecology beyond the Amazon 探索亚马逊河以外的奥罗普切热生态学
IF 56.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-15 DOI: 10.1016/s1473-3099(24)00728-x
Ignacio Postigo-Hidalgo, Jan Felix Drexler
No Abstract
无摘要
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引用次数: 0
Expansion of Oropouche virus in non-endemic Brazilian regions: analysis of genomic characterisation and ecological drivers 奥罗普切病毒在巴西非流行地区的扩展:基因组特征和生态驱动因素分析
IF 56.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-15 DOI: 10.1016/s1473-3099(24)00687-x
Tiago Gräf, Edson Delatorre, Caroline do Nascimento Ferreira, Agata Rossi, Hellen Geremias Gatica Santos, Bianca Ribeiro Pizzato, Valdinete Nascimento, Victor Souza, Gustavo Barbosa de Lima, Filipe Zimmer Dezordi, Alexandre Freitas da Silva, Clarice Neuenschwander Lins de Morais, Ighor Arantes, Mariza Hoffmann Machado, Darcita Buerger Rovaris, Mayra Marinho Presibella, Nelson Fernando Quallio Marques, Emanuelle Gemin Pouzato, Jucelia Stadinicki, Rodrigo Ribeiro-Rodrigues, Tulio de Lima Campos

Background

Oropouche virus (OROV) is an arbovirus endemic in the Amazon region that closely resembles other arboviruses in terms of human disease, leading to potential misdiagnoses. The virus ecology has mostly restricted its occurrence to the Amazon biome; however, after a large 2023–24 OROV epidemic in the Brazilian Amazon region, outbreaks are being reported across Brazil and in other countries in Latin America. Here, we investigate the OROV spread outside Amazonia.

Methods

In this genomic and epidemiological study, OROV cases from January, 2023, to July, 2024, provided by the General Coordination of Public Health Laboratories of Brazil on Aug 1, 2024, were compared by geographical location (Amazon vs non-Amazon) and municipal population size, and a linear mixed model was employed to assess the relationship between agricultural area size and cases. OROV-positive samples from central laboratories of five non-Amazonian Brazilian states were sequenced using an amplicon-based approach. Bayesian phylogeographical analysis was performed with near full-length viral genomes, incorporating individual travel histories when relevant. The estimated dates of viral introductions in each sampled location were then contextualised with public epidemiological data.

Findings

Epidemic data show that outside the Amazon region, OROV cases frequency was 3·9-times higher in small municipalities than in large municipalities. The planted areas of some agricultural products, such as banana plantations, were positively correlated (r=0·39, p<0·0001) with OROV cases. The linear mixed model revealed that, besides banana, cassava also has larger (p<0·05) planted areas in municipalities with OROV cases when compared with those with no cases. The phylogenetic analysis of 32 new OROV genomes reconstructed multiple exportation events of the newly identified reassortant lineage from the Amazon to other Brazilian regions between January and March, 2024. At least three of the previously described OROV phylogenetic clades circulating in the Amazon were the source of viral introductions. Molecular clock analysis estimated that viral introductions happened from 50 days to 100 days before detecting the outbreaks in each state.

Interpretation

Our results confirm that the novel OROV reassortant lineage spread from the Amazon to other regions in early 2024, successfully establishing local transmission. The fact that outbreaks were observed in small municipalities, instead of large urban centres, suggests that local ecological conditions that are ideal for OROV vector occurrence, such as the banana plantation environment, might be important factors driving its spread in Brazil.

Funding

DECIT, CNPq, FAPEAM, and Inova-Fiocruz.

Translation

For the Portuguese translation of the abstract see Supplementary Materials section.
背景奥罗普切病毒(OROV)是亚马逊地区流行的一种虫媒病毒,在人类疾病方面与其他虫媒病毒十分相似,可能导致误诊。该病毒的生态学特征主要限制了它在亚马逊生物群落中的出现;然而,继 2023-24 年 OROV 在巴西亚马逊地区大规模流行之后,巴西各地和拉丁美洲其他国家也陆续有疫情报告。在这项基因组学和流行病学研究中,我们按照地理位置(亚马逊地区与非亚马逊地区)和城市人口规模对巴西公共卫生实验室总协调局于 2024 年 8 月 1 日提供的 2023 年 1 月至 2024 年 7 月的 OROV 病例进行了比较,并采用线性混合模型评估了农业地区规模与病例之间的关系。采用基于扩增片段的方法对巴西五个非亚马孙地区州中心实验室的 OROV 阳性样本进行了测序。利用近全长病毒基因组进行了贝叶斯系统地理学分析,并在相关情况下纳入了个体旅行历史。研究结果流行病学数据显示,在亚马逊地区以外,小城市的 OROV 病例频率是大城市的 3-9 倍。香蕉种植园等一些农产品的种植面积与 OROV 病例呈正相关(r=0-39,p<0-0001)。线性混合模型显示,除香蕉外,木薯在有 OROV 病例的市镇的种植面积也比没有病例的市镇大(p<0-05)。通过对 32 个新的 OROV 基因组进行系统进化分析,重建了 2024 年 1 月至 3 月间新发现的再变种品系从亚马逊向巴西其他地区的多次输出事件。之前描述的在亚马逊地区流行的 OROV 系统发育支系中,至少有三个支系是病毒引入的源头。据分子钟分析估计,病毒引入发生在各州检测到疫情之前的50天至100天。 我们的研究结果证实,2024年初,新型OROV重变种系从亚马逊传播到其他地区,成功建立了本地传播。在小城市而非大城市中心观察到疫情爆发这一事实表明,香蕉种植园环境等非常适合 OROV 病媒发生的当地生态条件可能是导致其在巴西传播的重要因素。
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引用次数: 0
Adjunctive ivermectin mass drug administration for malaria control on the Bijagos Archipelago of Guinea-Bissau (MATAMAL): a quadruple-blinded, cluster-randomised, placebo-controlled trial 在几内亚比绍比热戈斯群岛(MATAMAL)大规模使用伊维菌素辅助控制疟疾:四重盲法、分组随机、安慰剂对照试验
IF 56.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-14 DOI: 10.1016/s1473-3099(24)00580-2
Harry Hutchins, Elizabeth Pretorius, John Bradley, Eunice Teixeira da Silva, Hristina Vasileva, Mamadou Ousmane Ndiath, Robert T Jones, Harouna dit Massire Soumare, Haddy Nyang, Aurelia Prom, Sarata Sambou, Fatima Ceesay, Sainey Ceesay, Sophie Moss, David Mabey, Paulo Djata, Jose Ernesto Nante, Cesario Martins, James G Logan, Hannah Slater, Anna Last
<h3>Background</h3>Arthropod vectors feeding on the blood of individuals treated with ivermectin have substantially increased mortality. Whether this effect will translate into a useful tool for reducing malaria burden at scale is not clear. Our trial aimed to assess whether using ivermectin as an adjunct to mass drug administration (MDA) with dihydroartemisinin–piperaquine would further reduce malaria prevalence.<h3>Methods</h3>MATAMAL was a quadruple-blinded, cluster-randomised, placebo-controlled trial, conducted on the Bijagos Archipelago, Guinea-Bissau, an area of seasonal malaria transmission. All residents were invited to participate, with exclusions for drug safety. 24 clusters were randomised in a 1:1 ratio, using restriction randomisation, to either MDA with three daily oral doses of dihydroartemisinin–piperaquine and ivermectin (300 μg/kg per day) in three sequential months during the transmission season in 2021 and 2022, or MDA with dihydroartemisinin–piperaquine and placebo in the same schedule. The primary outcome was quantitative PCR prevalence of <em>Plasmodium falciparum</em> parasitaemia in all age groups, during peak transmission, after the second year of intervention. The primary entomological outcome was anopheline parity rate. The trial is registered with <span><span>ClinicalTrials.gov</span><svg aria-label="Opens in new window" focusable="false" height="20" viewbox="0 0 8 8"><path d="M1.12949 2.1072V1H7V6.85795H5.89111V2.90281L0.784057 8L0 7.21635L5.11902 2.1072H1.12949Z"></path></svg></span> (<span><span>NCT04844905</span><svg aria-label="Opens in new window" focusable="false" height="20" viewbox="0 0 8 8"><path d="M1.12949 2.1072V1H7V6.85795H5.89111V2.90281L0.784057 8L0 7.21635L5.11902 2.1072H1.12949Z"></path></svg></span>).<h3>Findings</h3>Participants were recruited between June 7, 2021 and Sept 21, 2022. The baseline population was 25 882 (12 634 [50·6%] were female individuals and 12 317 [49·4%] were male individuals): 13 832 were in the intervention group and 12 050 in the control group. Cluster-level coverage for dihydroartemisinin–piperaquine ranged from 60·4% to 78·7%, and for ivermectin or ivermectin–placebo from 58·1 to 77·1%. Following the intervention, the prevalence of <em>P falciparum</em> infection was 118 (5·05%) of 2300 in the control group and 141 (6·64%) of 2083 in the intervention group. The adjusted risk difference was 1·67% (95% CI –1·44 to 4·78; p=0·28). There were 124 adverse events in the control group (1·0% of participants) and 267 in the intervention group (1·9% of participants). Two serious adverse events were reported, neither related to the intervention, and no treatment-related deaths. The anopheline parity rate was 1679 (67·8%) of 2475 in control clusters and 1740 (72·3%) of 2414 in intervention clusters. The adjusted risk difference was –1·32 (95% CI –14·77 to 12·12; p=0·84).<h3>Interpretation</h3>Adding ivermectin to dihydroartemisinin–piperaquine MDA had no additional effect on reducing
背景以伊维菌素治疗过的人的血液为生的节肢动物病媒的死亡率大幅上升。目前尚不清楚这种效果能否转化为大规模减少疟疾负担的有用工具。我们的试验旨在评估使用伊维菌素作为双氢青蒿素-哌喹大规模用药(MDA)的辅助手段是否会进一步降低疟疾流行率。方法MATAMAL是一项四重盲法、分组随机、安慰剂对照试验,在几内亚比绍比热戈斯群岛进行,该地区是疟疾季节性传播区。所有居民均受邀参加,但出于药物安全考虑,不在试验范围内。24 个群组按 1:1 的比例随机分配,采用限制性随机法,在 2021 年和 2022 年传播季节的连续三个月内,接受每日口服三次双氢青蒿素-哌喹和伊维菌素(每天 300 μg/kg)的 MDA,或接受同样时间段内口服双氢青蒿素-哌喹和安慰剂的 MDA。主要结果是干预第二年后传播高峰期各年龄组恶性疟原虫寄生虫血症的定量 PCR 感染率。昆虫学方面的主要结果是疟原虫奇偶率。该试验已在 ClinicalTrials.gov 上注册(NCT04844905)。研究结果参与者于 2021 年 6 月 7 日至 2022 年 9 月 21 日期间招募。基线人群为 25 882 人(其中女性 12 634 人[50-6%],男性 12 317 人[49-4%]):干预组为 13 832 人,对照组为 12 050 人。双氢青蒿素-哌喹的群组覆盖率从 60-4% 到 78-7%不等,伊维菌素或伊维菌素-安慰剂的群组覆盖率从 58-1% 到 77-1%不等。干预后,对照组 2300 人中恶性疟原虫感染率为 118(5-05%)人,干预组 2083 人中恶性疟原虫感染率为 141(6-64%)人。调整后的风险差异为 1-67%(95% CI -1-44 至 4-78;P=0-28)。对照组有 124 例不良事件(占参与者的 1-0%),干预组有 267 例(占参与者的 1-9%)。报告了两起严重不良事件,均与干预无关,没有与治疗相关的死亡病例。对照组 2475 人中有 1679 人(67-8%)感染了疟原虫,干预组 2414 人中有 1740 人(72-3%)感染了疟原虫。在这种情况下,在双氢青蒿素-哌喹 MDA 的基础上添加伊维菌素对降低疟疾流行率或病媒奇偶性没有额外效果。干预措施的耐受性良好。据我们所知,该试验是首个旨在评估伊维菌素与双氢青蒿素-哌啶MDA联合应用时是否对疟疾有额外效果的试验。
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引用次数: 0
Is ivermectin surviving expectations in residual malaria control? 伊维菌素在控制残余疟疾方面是否能达到预期效果?
IF 56.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-14 DOI: 10.1016/s1473-3099(24)00652-2
Karine Mouline, Carlo Costantini
No Abstract
无摘要
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引用次数: 0
The dangers of medication sharing at private sex parties 私人性派对上共用药物的危险
IF 56.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-08 DOI: 10.1016/s1473-3099(24)00690-x
Matthew J Mimiaga, Nina T Harawa
No Abstract
无摘要
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引用次数: 0
Gilead under fire over HIV drug licensing 吉利德公司因艾滋病药物许可问题受到抨击
IF 56.3 1区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-08 DOI: 10.1016/s1473-3099(24)00747-3
Ed Holt
No Abstract
无摘要
{"title":"Gilead under fire over HIV drug licensing","authors":"Ed Holt","doi":"10.1016/s1473-3099(24)00747-3","DOIUrl":"https://doi.org/10.1016/s1473-3099(24)00747-3","url":null,"abstract":"No Abstract","PeriodicalId":49923,"journal":{"name":"Lancet Infectious Diseases","volume":"20 7 1","pages":""},"PeriodicalIF":56.3,"publicationDate":"2024-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142596481","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Lancet Infectious Diseases
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