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Erratum regarding missing ethical statements for experimentation with human and animal subjects in previously published articles 关于先前发表的文章中遗漏的人类和动物受试者实验伦理声明的勘误表
Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2023-09-01 DOI: 10.1016/j.inpa.2023.08.002
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引用次数: 0
Comparison of stem volume estimates from terrestrial point clouds for mature Douglas-fir (Pseudotsuga menziessi (Mirb.) Franco) 从陆地点云估算成熟花旗松树干体积的比较
Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2023-09-01 DOI: 10.1016/j.inpa.2022.03.003
Rong Fang, Bogdan M. Strimbu

As a complement to traditional estimates of stem dimensions from numerical models, terrestrial light detection and ranging (Lidar) provides direct stem diameter and volume values using cylindrical models constructed from point clouds. This study used two approaches to estimate total stem volume using Lidar and compared them with two empirical equations, one used by the Forest Inventory Analysis in the Pacific Northwest (FIA-PNW) and one based on a taper equation. We fitted point clouds of 10 Douglas-fir with three sets of cylinder models that are distinguished by their segment length (i.e. 0.5 m, 1 m, and 2 m), then developed three taper equations based on the point-cloud-based diameter estimated previously. We estimated the total stem volume of the tree with eight models: six-point cloud-based (i.e. three taper and three cylinders) and two empirical. Finally, we used simulations to extrapolate the volume estimations of various methods for different diameters at breast height (DBH) classes. We found that all the point-cloud-based taper equations were similar in their performance (R2=0.94, RMSE = 4.6 cm) and produced mean volume estimates greater than mean estimates of the existing models. The cylinder models produced 11–16% greater mean volume estimates than the FIA-PNW estimate, with the 0.5 m segment length producing the greatest values, followed by the 1 m and 2 m segment length. The simulated data suggested that the mean volume estimates of a given DBH class are different when using different computation methods. ANOVA revealed a combined effect of the computation methods and the DBH class on the mean volume estimates. We conclude that the point-cloud-based taper equations, after being symmetrically calibrated, would be consistent with the regional stem volume estimates, whereas the cylinder models would be better in estimating individual stem volume. When constructing Lidar-based cylinder models in future applications, cylinder segment length would need to be adjusted to the length and DBH of the stem, as well as to the objectives of the research.

作为传统数值模型估算茎干尺寸的补充,地面光探测和测距(激光雷达)使用由点云构建的圆柱形模型提供直接的茎干直径和体积值。本研究使用两种方法利用激光雷达来估计总茎体积,并将其与两个经验方程进行比较,一个是太平洋西北地区森林清查分析(FIA-PNW)使用的,另一个是基于锥度方程的。我们用三组圆柱体模型拟合了10棵道格拉斯冷杉的点云,这些圆柱体模型由它们的段长度(即0.5 m, 1 m和2 m)区分,然后根据先前估计的基于点云的直径建立了三个锥度方程。我们估计了树的总茎体积与八个模型:六点云为基础(即三个锥度和三个圆柱体)和两个经验。最后,我们使用模拟来推断不同胸径(DBH)类别下各种方法的体积估计。我们发现,所有基于点云的锥度方程的性能相似(R2=0.94, RMSE = 4.6 cm),并且产生的平均体积估计值大于现有模型的平均估计值。圆柱体模型比FIA-PNW模型估计的平均体积高11-16%,其中0.5 m段长度产生的值最大,其次是1m和2m段长度。模拟数据表明,采用不同的计算方法,给定DBH类的平均体积估计值是不同的。方差分析揭示了计算方法和DBH类对平均体积估计的综合影响。我们得出的结论是,经过对称校准后,基于点云的锥度方程将与区域茎体积估计值一致,而圆柱体模型将更好地估计单个茎体积。在未来的应用中,当构建基于激光雷达的圆柱体模型时,圆柱体段的长度需要根据杆的长度和胸径以及研究目标进行调整。
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引用次数: 0
Erratum to missing ethical statements for experimentation with human and animal subjects in previously published articles 之前发表的文章中遗漏了人类和动物受试者实验的伦理声明的勘误表
Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2023-09-01 DOI: 10.1016/j.inpa.2023.08.003
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引用次数: 0
Fusion of spatiotemporal and thematic features of textual data for animal disease surveillance 动物疾病监测文本数据时空与主题特征融合研究
Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2023-09-01 DOI: 10.1016/j.inpa.2022.03.004
Sarah Valentin , Renaud Lancelot , Mathieu Roche

Several internet-based surveillance systems have been created to monitor the web for animal health surveillance. These systems collect a large amount of news dealing with outbreaks related to animal diseases. Automatically identifying news articles that describe the same outbreak event is a key step to quickly detect relevant epidemiological information while alleviating manual curation of news content. This paper addresses the task of retrieving news articles that are related in epidemiological terms. We tackle this issue using text mining and feature fusion methods. The main objective of this paper is to identify a textual representation in which two articles that share the same epidemiological content are close. We compared two types of representations (i.e., features) to represent the documents: (i) morphosyntactic features (i.e., selection and transformation of all terms from the news, based on classical textual processing steps) and (ii) lexicosemantic features (i.e., selection, transformation and fusion of epidemiological terms including diseases, hosts, locations and dates). We compared two types of term weighing (i.e., Boolean and TF-IDF) for both representations. To combine and transform lexicosemantic features, we compared two data fusion techniques (i.e., early fusion and late fusion) and the effect of features generalisation, while evaluating the relative importance of each type of feature. We conducted our analysis using a corpus composed of a subset of news articles in English related to animal disease outbreaks. Our results showed that the combination of relevant lexicosemantic (epidemiological) features using fusion methods improves classical morphosyntactic representation in the context of disease-related news retrieval. The lexicosemantic representation based on TF-IDF and feature generalisation (F-measure = 0.92, r-precision = 0.58) outperformed the morphosyntactic representation (F-measure = 0.89, r-precision = 0.45), while reducing the features space. Converting the features into lower granular features (i.e., generalisation) contributed to improving the results of the lexicosemantic representation. Our results showed no difference between the early and late fusion approaches. Temporal features performed poorly on their own. Conversely, spatial features were the most discriminative features, highlighting the need for robust methods for spatial entity extraction, disambiguation and representation in internet-based surveillance systems.

已经建立了几个基于互联网的监测系统来监测网络上的动物健康监测。这些系统收集了大量与动物疾病暴发有关的新闻。自动识别描述同一疫情事件的新闻文章是快速发现相关流行病学信息的关键步骤,同时减轻了对新闻内容的人工管理。本文解决了检索与流行病学术语相关的新闻文章的任务。我们使用文本挖掘和特征融合方法来解决这个问题。本文的主要目的是确定两篇具有相同流行病学内容的文章接近的文本表示。我们比较了两种类型的表征(即特征)来表示文件:(i)形态句法特征(即基于经典文本处理步骤从新闻中选择和转换所有术语)和(ii)词汇语义特征(即选择,转换和融合流行病学术语,包括疾病,宿主,地点和日期)。我们比较了两种表示的两种类型的术语加权(即布尔和TF-IDF)。为了组合和转换词汇语义特征,我们比较了两种数据融合技术(即早期融合和晚期融合)和特征泛化的效果,同时评估了每种类型特征的相对重要性。我们使用一个由与动物疾病暴发相关的英语新闻文章子集组成的语料库进行了分析。我们的研究结果表明,使用融合方法将相关的词汇语义(流行病学)特征组合在一起,可以改善疾病相关新闻检索中的经典形态句法表示。基于TF-IDF和特征泛化的词汇语义表示(F-measure = 0.92, r-precision = 0.58)优于形态句法表示(F-measure = 0.89, r-precision = 0.45),同时减少了特征空间。将特征转换为更低粒度的特征(即泛化)有助于改善词汇语义表示的结果。我们的结果显示早期和晚期融合入路没有差异。时间特征本身表现不佳。相反,空间特征是最具区别性的特征,这突出了在基于互联网的监测系统中对空间实体提取、消歧和表示的强大方法的需求。
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引用次数: 1
A novel artificial bee colony-optimized visible oblique dipyramid greenness index for vision-based aquaponic lettuce biophysical signatures estimation 一种新的人工蜂群优化的基于视觉的水培生菜生物物理特征估计的可见倾斜双锥虫绿度指数
Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2023-09-01 DOI: 10.1016/j.inpa.2022.03.002
Ronnie Concepcion II , Elmer Dadios , Edwin Sybingco , Argel Bandala

In response to the challenges in providing real-time extraction of crop biophysical signatures, computer vision in computational crop phenotyping highlights the opportunities of computational intelligence solutions. Shadow and angular brightness due to the presence of photosynthetic light unevenly illuminate crop canopy. In this study, a novel vegetation index named artificial bee colony-optimized visible band oblique dipyramid greenness index (vODGIabc) was proposed to enhance vegetation pixels by correcting the saturation and brightness levels, and the ratio of visible RGB reflectance intensities. Consumer-grade smartphone was used to acquire indoor and outdoor aquaponic lettuce images daily for full 6-week crop life cycle. The introduced saturation rectification coefficient (Ω), value rectification coefficient (ν), green–red wavelength adjustment factor (α), and green–blue wavelength adjustment factor (β) on the original triangular greenness index resulted in 3D canopy reflectance spectrum with two oblique tetrahedrons formed by connecting the vertices of visible RGB band reflectance and maximum wavelength point map to corresponding saturation and value of lettuce-captured images. Hybrid neighborhood component analysis (NCA), minimum redundancy maximum relevance (MRMR), Pearson’s correlation coefficient (PCC), and analysis of variance (ANOVA) weighted most of the canopy area, energy, and homogeneity. Strong linear relationships were exhibited by using vODGIabc in estimating lettuce crop fresh weight, height, number of spanning leaves, leaf area index, and growth stage with R2 values of 0.936 8 for InceptionV3, 0.957 4 for ResNet101, 0.961 2 for ResNet101, 0.999 9 for Gaussian processing regression, and accuracy of 88.89% for ResNet101, respectively. This low-cost approach on developing greenness index for biophysical signatures estimation proved to be more accurate than the previously established triangular greenness index (TGI) using RGB smartphone camera.

为了应对实时提取作物生物物理特征的挑战,计算作物表型中的计算机视觉突出了计算智能解决方案的机会。由于光合光的存在,阴影和角亮度不均匀地照亮作物冠层。本研究提出了一种新的植被指数——人工蜂群优化可见光波段斜双金字塔绿度指数(vODGIabc),通过校正植被的饱和度和亮度水平以及可见光RGB反射强度的比值来增强植被像元。使用消费级智能手机每天获取室内和室外的水培生菜图像,整个作物生命周期为6周。在原始三角形绿度指数上引入饱和校正系数(Ω)、数值校正系数(ν)、绿红波长调整因子(α)、绿蓝波长调整因子(β),得到由可见RGB波段反射率和最大波长点图的顶点与生菜捕获图像对应的饱和度和值连接而成的两个斜四面体的三维冠层反射率光谱。混合邻域分量分析(NCA)、最小冗余最大相关性(MRMR)、Pearson相关系数(PCC)和方差分析(ANOVA)对冠层面积、能量和均匀性进行加权。利用vODGIabc对生菜鲜重、高、跨叶数、叶面积指数和生育期的预测结果具有较强的线性关系,其中InceptionV3、ResNet101、ResNet101和高斯处理回归的R2分别为0.936 8、0.957 4、0.961 2和0.999 9,ResNet101的预测精度为88.89%。这种低成本的绿色指数开发方法被证明比之前使用RGB智能手机相机建立的三角形绿色指数(TGI)更准确。
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引用次数: 2
Erratum to missing ethical statements for experimentation with human and animal subjects in previously published articles 对先前发表的文章中缺失的人类和动物实验伦理声明的勘误
Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2023-09-01 DOI: 10.1016/j.inpa.2023.08.005
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引用次数: 0
Deep learning based classification of sheep behaviour from accelerometer data with imbalance 基于深度学习的不平衡加速度计数据羊行为分类
Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2023-09-01 DOI: 10.1016/j.inpa.2022.04.001
Kirk E. Turner , Andrew Thompson , Ian Harris , Mark Ferguson , Ferdous Sohel

Classification of sheep behaviour from a sequence of tri-axial accelerometer data has the potential to enhance sheep management. Sheep behaviour is inherently imbalanced (e.g., more ruminating than walking) resulting in underperforming classification for the minority activities which hold importance. Existing works have not addressed class imbalance and use traditional machine learning techniques, e.g., Random Forest (RF). We investigated Deep Learning (DL) models, namely, Long Short Term Memory (LSTM) and Bidirectional LSTM (BLSTM), appropriate for sequential data, from imbalanced data. Two data sets were collected in normal grazing conditions using jaw-mounted and ear-mounted sensors. Novel to this study, alongside typical single classes, e.g., walking, depending on the behaviours, data samples were labelled with compound classes, e.g., walking_grazing. The number of steps a sheep performed in the observed 10 s time window was also recorded and incorporated in the models. We designed several multi-class classification studies with imbalance being addressed using synthetic data. DL models achieved superior performance to traditional ML models, especially with augmented data (e.g., 4-Class + Steps: LSTM 88.0%, RF 82.5%). DL methods showed superior generalisability on unseen sheep (i.e., F1-score: BLSTM 0.84, LSTM 0.83, RF 0.65). LSTM, BLSTM and RF achieved sub-millisecond average inference time, making them suitable for real-time applications. The results demonstrate the effectiveness of DL models for sheep behaviour classification in grazing conditions. The results also demonstrate the DL techniques can generalise across different sheep. The study presents a strong foundation of the development of such models for real-time animal monitoring.

从一系列三轴加速度计数据中对羊的行为进行分类有可能加强羊的管理。羊的行为本质上是不平衡的(例如,反刍多于行走),导致对少数重要活动的分类表现不佳。现有的工作没有解决阶级不平衡问题,并使用传统的机器学习技术,例如随机森林(RF)。我们研究了深度学习(DL)模型,即长短期记忆(LSTM)和双向LSTM (BLSTM),适用于序列数据,来自不平衡数据。在正常放牧条件下,采用下颌和耳戴式传感器采集两组数据。本研究的新颖之处在于,除了典型的单一类别,例如步行,根据行为,数据样本被标记为复合类别,例如步行-放牧。在观察到的10 s时间窗口内,羊的步数也被记录并纳入模型。我们设计了几个多类分类研究,使用合成数据解决了不平衡问题。深度学习模型取得了优于传统ML模型的性能,特别是在增强数据(例如,4类+步骤:LSTM 88.0%, RF 82.5%)。DL方法在未见绵羊上表现出较好的通用性(即f1得分:BLSTM 0.84, LSTM 0.83, RF 0.65)。LSTM, BLSTM和RF实现了亚毫秒的平均推理时间,使它们适合实时应用。结果表明DL模型对放牧条件下绵羊行为分类的有效性。结果还表明,深度学习技术可以推广到不同的绵羊身上。该研究为开发此类实时动物监测模型提供了坚实的基础。
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引用次数: 11
Key technologies and applications of agricultural energy Internet for agricultural planting and fisheries industry 农业能源互联网在农业种植渔业中的关键技术及应用
Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2023-09-01 DOI: 10.1016/j.inpa.2022.10.004
Xueqian Fu , Haosen Niu

Energy consumption in the agricultural sector is significant, reaching 20% of the total energy consumption in China. Agricultural Energy Internet, an important extension of Energy Internet in the agricultural field, significantly contributes to agricultural modernization. Key technologies of Agricultural Energy Internet are vital factors supporting its development. This article systematically reviews the key technologies of Agricultural Energy Internet for two areas: agriculture and fishery. The working mechanisms and power consumption characteristics of some state-of-the-art new-energy agricultural intelligent equipment are described. In addition, the principles and profit methods underlying the agro-industrial complementary operation model are introduced. Moreover, against the Agricultural Energy Internet background, the development trends of some state-of-the-art new energy agricultural intelligent equipment, agro-industrial complementary, and carbon–neutral technology are proposed in this paper, providing novel perspectives on the promotion of the development of Agricultural Energy Internet and related technological innovation research. An unmanned farm is the main form of the future agricultural system, which is powered by the Agricultural Energy Internet based on smart agriculture and a smart grid. It will become the inevitable trend of modern agriculture to replace oil agriculture with electric farms. The electricity in farming is mainly generated by renewable energy. Renewable energy power generation has low carbon emissions and is the future direction for the development of agricultural energy systems. In addition, the Internet of Things will be further strengthened to realize automation and intelligence of agricultural energy systems.

农业领域的能源消耗很大,占中国能源消耗总量的20%。农业能源互联网是能源互联网在农业领域的重要延伸,对农业现代化具有重要意义。农业能源互联网的关键技术是支撑其发展的重要因素。本文系统评述了农业和渔业两个领域的农业能源互联网关键技术。介绍了几种新型新能源农业智能装备的工作机理和功耗特点。此外,还介绍了农产互补经营模式的原理和盈利方法。此外,在农业能源互联网背景下,本文提出了一些最先进的新能源农业智能装备、农产互补和碳中和技术的发展趋势,为推动农业能源互联网的发展和相关技术创新研究提供了新的视角。无人农场是未来农业系统的主要形式,以智慧农业和智能电网为基础的农业能源互联网为动力。以电力农场代替石油农业将成为现代农业发展的必然趋势。农业用电主要由可再生能源产生。可再生能源发电具有低碳排放的特点,是未来农业能源系统发展的方向。此外,将进一步加强物联网,实现农业能源系统的自动化和智能化。
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引用次数: 26
Erratum to missing ethical statements for experimentation with human and animal subjects in previously published articles 对先前发表的文章中缺失的人类和动物实验伦理声明的勘误
Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2023-09-01 DOI: 10.1016/j.inpa.2023.08.004
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引用次数: 0
Fusion of RetinaFace and Improved FaceNet for Individual Cow Identification in Natural Scenes 融合视网膜人脸和改进人脸网的自然场景奶牛个体识别
Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2023-09-01 DOI: 10.1016/j.inpa.2023.09.001
Lingling Yang, Xingshi Xu, Jizheng Zhao, Huaibo Song
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引用次数: 0
期刊
Information Processing in Agriculture
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