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Genetic evaluation of the unknown contribution of stocked fish in angler catches: a case study using Mulloway Argyrosomus japonicus 放养鱼类在垂钓者渔获量中未知贡献的遗传评价:以马洛威鱼为例
IF 1.5 4区 地球科学 Q2 Earth and Planetary Sciences Pub Date : 2021-01-01 DOI: 10.5343/bms.2020.0050
M. D. Taylor, H. Premachandra, D. Hurwood, Sudath T. Dammannagoda, King Hang Chan, P. Mather, C. A. Gray, W. Knibb
Stock enhancement involves the augmentation of wild populations with hatchery-reared recruits. Stock enhancement generally also includes a postrelease monitoring program which tracks stocked individuals within the fishery, and this relies on having a means to identify the likely origin of recaptured fish (e.g., physical, otolith, or genetic tags). This study reports the application of sibship analysis to retrospectively infer the origin of Mulloway (Argyrosomus japonicus) within stocked estuaries, when other means of identification were not available. Eight cohorts of Mulloway were stocked into two estuaries, across a seven-year period, but only some of the fish released during the program were physically marked with chemical otolith stains. Fish were sampled from stocked estuaries (mostly through an angler-based sampling program) and genotyped for six microsatellite loci, alongside 129 fish sampled from nonstocked estuaries. The presence of multiple sibs within the mixed populations in stocked estuaries was used to infer the origin of captured fish, against a background of sibship for known-origin individuals (verified by otolith marks) and sibship levels within unstocked estuaries. The analysis suggested hatchery-reared fish could have contributed 9% of individuals sampled from the augmented populations (7% when corrected for background sibship). The proportion of fish inferred to be of hatchery origin decreased with size (likely due to mortality and migration), and the expected contribution rates for hatchery-reared fish differed among cohorts. The results highlight that sibship analysis may be useful for retrospective genetic evaluation of stocked estuaries.
种群增加包括用孵化场饲养的新成员来增加野生种群。种群增加通常还包括放生后监测计划,该计划跟踪渔场内的存量个体,这依赖于有一种方法来确定重新捕获的鱼的可能来源(例如,物理、耳石或遗传标签)。本研究报告在没有其他鉴定方法的情况下,应用兄弟关系分析在有资源的河口内回顾性推断Mulloway (Argyrosomus japonicus)的起源。在7年的时间里,8组马洛威鱼被放养在两个河口,但在该计划中,只有一些鱼被化学耳石染色。研究人员从放养的河口采集了鱼类样本(主要是通过垂钓者取样程序),并对6个微卫星位点进行了基因分型,同时从无放养的河口采集了129条鱼类样本。根据已知来源个体的兄弟姐妹背景(通过耳石标记验证)和未放养河口内的兄弟姐妹水平,利用放养河口混合种群中多个兄弟姐妹的存在来推断捕获鱼的来源。分析表明,孵化场饲养的鱼可能贡献了扩增种群中9%的样本(根据背景兄弟姐妹进行校正后为7%)。推断来自孵化场的鱼的比例随着大小而减少(可能是由于死亡和迁徙),孵化场饲养的鱼的预期贡献率在队列中有所不同。结果表明,兄弟关系分析可用于鱼类种群的回顾性遗传评价。
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引用次数: 3
First record of synchronous coral spawning in a marginal coral community in Shenzhen, China 深圳边缘珊瑚群落同步产卵的首次记录
IF 1.5 4区 地球科学 Q2 Earth and Planetary Sciences Pub Date : 2021-01-01 DOI: 10.5343/BMS.2020.0070
Yu Zhao, Xiao-fei Zhang, Mingru Chen
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引用次数: 0
Recovery from finfish predation on newly outplanted boulder coral colonies on three reefs in the Florida Keys 在佛罗里达群岛的三个珊瑚礁上,新种植的巨石珊瑚群落从鱼类捕食中恢复过来
IF 1.5 4区 地球科学 Q2 Earth and Planetary Sciences Pub Date : 2021-01-01 DOI: 10.5343/BMS.2020.0056
Kylie M. Smith, Devon M Pharo, C. Shea, Brian A Reckenbeil, K. Maxwell, W. Sharp
Corals throughout the Caribbean have experienced major declines since the 1970s. In response, many agencies have focused their conservation and restoration efforts on outplanting nursery-grown coral fragments onto degraded reefs. Predation on newly outplanted corals can be an important but often unmonitored factor contributing to the declining health and survival of these fragments. In this study, we outplanted 360 boulder coral fragments (Montastraea cavernosa, Orbicella faveolata, Pseudodiploria clivosa), sourced from both ex situ and in situ nurseries, at three locations in the Florida Keys. Each location included one inshore and one offshore site. Ten fragments of each species and source were outplanted at each site (60 corals per site). Transplants were monitored for finfish predation, live tissue area, and survival at 1, 2, 6, and 12 wks post-outplanting. We found the highest finfish predation for all species during the 1 wk monitoring period. Predation during this first week varied by location and reef type, with two locations showing higher predation on offshore sites and one location experiencing increased predation on the inshore site. We also found that coral fragments produced in the ex situ nursery experienced higher initial predation compared to fragments produced in the in situ nursery. However, overall coral survival at 12 wks post-outplanting was 96%, suggesting there was no effect of initial predation on survival. Our results indicate that coral restoration efforts may be affected by intense, initial predation on newly-outplanted boulder coral colonies, but this initial predation may not lead to an increase in mortality.
自20世纪70年代以来,整个加勒比地区的珊瑚都经历了严重的衰退。作为回应,许多机构将保护和恢复工作的重点放在将苗圃生长的珊瑚碎片移植到退化的珊瑚礁上。对新种植的珊瑚的捕食可能是一个重要但往往不受监测的因素,导致这些碎片的健康和存活率下降。在这项研究中,我们在佛罗里达群岛的三个地点种植了360块巨石珊瑚碎片(Montastraea cavernosa, Orbicella faveolata, Pseudodiploria clivosa),这些碎片来自非原位和原位苗圃。每个地点包括一个近海地点和一个近海地点。在每个地点种植每个物种和来源的10个碎片(每个地点60个珊瑚)。在移植后1、2、6和12周监测移植鱼的捕食情况、活组织面积和存活率。在1周的监测期间,所有物种的鱼类捕食率最高。第一周的捕食情况因地点和珊瑚礁类型而异,两个地点的近海捕食率较高,一个地点的近海捕食率较高。我们还发现,在迁地苗圃中产生的珊瑚碎片比在原地苗圃中产生的碎片经历了更高的初始捕食。然而,移植后12周的珊瑚总体存活率为96%,这表明最初的捕食对存活率没有影响。我们的研究结果表明,珊瑚恢复工作可能受到新种植的圆石珊瑚群落强烈的初始捕食的影响,但这种初始捕食可能不会导致死亡率的增加。
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引用次数: 2
Phylogeography of two marine predators, giant trevally (Caranx ignobilis) and bluefin trevally (Caranx melampygus), across the Indo-Pacific 两种海洋食肉动物,巨型鲹鱼(Caranx ignobilis)和蓝鳍鲹鱼(Caranx melampygus),横跨印度太平洋的系统地理学
IF 1.5 4区 地球科学 Q2 Earth and Planetary Sciences Pub Date : 2021-01-01 DOI: 10.5343/BMS.2019.0114
J. R. Glass, S. R. Santos, J. Kauwe, Brandon D. Pickett, T. Near
For economically valuable marine fishes, identifying biogeographic barriers and estimating the extent of gene flow are critical components of fisheries management. We examined the population genetic structure of two commercially important reef-associated predators, the giant trevally ( Caranx ignobilis) and bluefin trevally (Caranx melampygus). We sampled 225 individuals and 32,798 single nucleotide polymorphisms (SNPs) of C. ignobilis, and 74 individuals and 43,299 SNPs of C. melampygus. Analyses of geographic population structure indicate the two species display subtly different phylogeographic patterns. Caranx ignobilis comprises two to three putative populations—one in the Central Pacific, one inhabiting the Western Pacific and Eastern Indian oceans, and one in the Western Indian Ocean—with some restricted gene flow between them. Caranx melampygus shows evidence of restricted gene flow from Hawaii to the West Pacific and Indian oceans, as well as limited genetic connectivity across the Indo- Pacific Barrier. Both species exhibit patterns characteristic of other large, reef-associated predators such as deepwater snappers and the great barracuda. This study contributes to ongoing assessments of the role of the Indo-Pacific Barrier in shaping patterns of phylogeography for large reef-associated fishes. Furthermore, by identifying putative populations of C. ignobilis and C. melampygus in the Central Pacific, our findings serve to improve future management measures for these economically important, data-limited species, particularly in light of historic and contemporary overfishing in Hawaii.
对于具有经济价值的海洋鱼类,确定生物地理障碍和估计基因流动的程度是渔业管理的关键组成部分。我们研究了两种商业上重要的与珊瑚礁相关的捕食者,巨型鲹鱼(Caranx ignobilis)和蓝鳍鲹鱼(Caranx melampygus)的种群遗传结构。本研究共采集了225个单核苷酸多态性(32798个snp)和74个单核苷酸多态性(43299个snp)。地理种群结构分析表明,这两个物种表现出微妙的不同的系统地理格局。Caranx ignobilis由两到三个假定的种群组成——一个在中太平洋,一个居住在西太平洋和东印度洋,一个在西印度洋——它们之间有一些有限的基因流动。有证据表明,从夏威夷到西太平洋和印度洋的基因流动受到限制,而且跨越印度洋-太平洋屏障的基因连接也受到限制。这两个物种都表现出其他大型珊瑚礁捕食者的特征,如深水鲷鱼和大梭鱼。这项研究有助于持续评估印度太平洋屏障在塑造大型珊瑚礁相关鱼类的系统地理学模式中的作用。此外,通过在中太平洋地区确定C. ignobilis和C. melampygus的假定种群,我们的发现有助于改善这些经济上重要的、数据有限的物种的未来管理措施,特别是考虑到夏威夷历史和当代的过度捕捞。
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引用次数: 4
Development of an individual-based tag recapture model to benchmark biomass and harvest rates in an iconic lobster fishery 一个基于个体的标签捕获模型的发展,以基准生物量和收获率在一个标志性的龙虾渔业
IF 1.5 4区 地球科学 Q2 Earth and Planetary Sciences Pub Date : 2021-01-01 DOI: 10.5343/bms.2021.0026
S. de Lestang, J. Hoenig, J. How
The West Coast Rock Lobster Managed Fishery (WCRLMF) moved from input to output controls in 2010. This change affected the relativity of fishery-based data sources (e.g., catch rates and landed size composition), making the assessment of the fishery problematic. A novel examination of the stock dynamics was required to ensure the robustness of the stock assessment and associated management arrangements. This study derived estimates of current biomass levels and harvest rates from the release of over 60,000 tagged western rock lobsters (Panulirus cygnus). A “Brownie” tag-recapture (BTR) model was initially implemented to provide an assessment on a fishery-wide basis. Estimates from this were compared to those derived from a novel purpose-built tag-recapture individual-based model (IBM) that accounted for sex, size, month, and location-specific changes in catchability. The two models produced similar estimates on a fishery-wide scale—harvest rate (HR 0.26 vs 0.30, respectively) and legal-sized biomass (about 24,500 vs 20,735 t, respectively)—while the IBM also provided estimates on a far finer spatial and temporal scale. Both models indicate that the WCRLMF is currently in a very sustainable condition and is being fished at a rate below maximum economic yield (HRmey is about 0.39). These findings were in concert with estimates derived for this fishery based on two separate catch-rate based population models, an integrated population model and a biomass-dynamics model. Such strong agreement among all models provides great certainty in the current assessment and management of this important marine resource.
2010年,西海岸岩龙虾管理渔业(WCRLMF)从投入控制转为产出控制。这一变化影响到以渔业为基础的数据来源的相对性(例如渔获率和上岸面积组成),使渔业的评估出现问题。需要对库存动态进行新的审查,以确保库存评估和有关管理安排的稳健性。这项研究从释放超过6万只带标签的西部岩龙虾(Panulirus cygnus)中得出了当前生物量水平和收获率的估计。最初实施了“布朗尼”标签再捕获(BTR)模型,以提供全渔业的评估。研究人员将这些估计值与一种新型的基于个体的标签再捕获模型(IBM)的估计值进行了比较,该模型考虑了可捕获性的性别、大小、月份和特定地点的变化。这两个模型对整个渔业的收获率(HR分别为0.26和0.30)和法定规模的生物量(HR分别为24,500和20,735吨)产生了相似的估计,而IBM还提供了更精细的空间和时间尺度的估计。这两种模式都表明,西太平洋海域渔业资源目前处于非常可持续的状态,正在以低于最大经济产量(HRmey约为0.39)的速度进行捕捞。这些发现与根据两个单独的基于捕捞率的人口模型、综合人口模型和生物量动力学模型得出的对该渔业的估计相一致。所有模式之间的这种强烈一致为目前对这一重要海洋资源的评估和管理提供了极大的确定性。
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引用次数: 1
Using ecological evidence to refine approaches to deploying offshore artificial reefs for recreational fisheries 利用生态证据,改进为休闲渔业部署近海人工鱼礁的方法
IF 1.5 4区 地球科学 Q2 Earth and Planetary Sciences Pub Date : 2021-01-01 DOI: 10.5343/bms.2020.0059
C. Blount, V. Komyakova, L. Barnes, Marcus P. Lincoln Smith, Dilys Zhang, K. Reeds, D. McPhee, M. D. Taylor, W. Macbeth, E. Needham
Artificial reefs have many applications but are best known for their deployments to enhance recreational fisheries by creating new habitat in areas where natural reef is otherwise limited. The expectation is that fish assemblages will take up residence on artificial reefs and that these assemblages will become at least similar, if not more diverse and abundant, to those on natural reefs. Although designed, purpose-built artificial reefs are becoming more widely used in support of recreational fisheries and many of the historic issues have been resolved, conservation practitioners and managers still face challenges as to the type, number, and arrangement of structures and where to deploy them to maximize benefits and minimize risks. The ecological literature was reviewed to develop and enhance contemporary principles of artificial reef best practices for utilization. Our review identified optimal shapes, vertical relief, void spaces, and unit arrangements for increasing volumes and diversity of catch to recreational fishers and we provide a tool for identifying the least constrained areas for artificial reef deployment. We suggest; (a) monitoring of noncatch motivators in combination with quantitative indicators of the fishing activity (e.g., catch rate and effort) will provide the best understanding of success or failure of an artificial reef deployment; (b) choosing target species for informing purpose-built artificial reef designs to be reef-associated, demersal, philopatric, territorial, and obligatory reef species that are desired by local recreational fishers; and (c) considering the ecosystem services provided by artificial reefs beyond those associated with recreational fishing.
人工鱼礁有许多用途,但最广为人知的是在天然鱼礁有限的地区,利用人工鱼礁创造新的生境,以促进休闲渔业的发展。人们预计,鱼类群落将在人工珊瑚礁上定居,这些群落至少会变得与自然珊瑚礁上的鱼类群落相似,如果不是更多样化和丰富的话。虽然设计和建造的人工鱼礁越来越广泛地用于支持休闲渔业,许多历史问题也得到了解决,但保护工作者和管理者仍然面临着诸如结构的类型、数量和安排以及在何处部署它们以最大化效益和最小化风险的挑战。回顾了生态文献,以发展和加强当代人工鱼礁的最佳利用原则。我们的研究确定了最佳的形状、垂直浮雕、空隙空间和单元安排,以增加休闲渔民的捕捞量和多样性,我们提供了一个工具来确定人工鱼礁部署的最小限制区域。我们建议;(a)监测非渔获刺激因素与捕鱼活动的数量指标(例如渔获率和努力量)相结合,将提供对人工鱼礁部署成功或失败的最佳了解;(b)选择目标鱼种,以告知有意建造的人工鱼礁设计为与珊瑚礁有关的、底栖的、博爱的、领土的和强制性的鱼礁,而这些鱼礁是本地康乐渔民所需要的;(c)考虑人工珊瑚礁提供的生态系统服务,而不仅仅是与休闲捕鱼有关的服务。
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引用次数: 6
Nonlethal stable isotope analysis reveals consistent trophic growth of juvenile Atlantic goliath grouper Epinephelus itajara in Brazilian estuaries 非致死稳定同位素分析揭示了巴西河口大西洋歌利亚石斑鱼幼鱼的一致营养生长
IF 1.5 4区 地球科学 Q2 Earth and Planetary Sciences Pub Date : 2021-01-01 DOI: 10.5343/bms.2021.0025
L. L. Almeida, C. Stallings, M. Condini, A. M. Garcia, O. Tzadik, C. Koenig, M. Hostim-Silva
Atlantic goliath grouper Epinephelus itajara (Lichtenstein, 1822) are classified as vulnerable by the IUCN and have decreasing local populations throughout their distribution due to overfishing and habitat degradation. Due to their protected status, basic life history information that can inform management and conservation is lacking for some local populations, including in Brazil. In the present study, we examined how δ15N of juvenile Atlantic goliath grouper fin rays, a nonlethal method, varied with total length across four estuaries in Brazil. A total of 100 juvenile Atlantic goliath grouper (total length range: 95–505 mm) were analyzed, and we observed positive relationships between δ15N and fish lengths (i.e., evidence of trophic growth). Among-estuarine slopes did not differ, suggesting trophic growth was consistent among sites despite different δ15N values between the northernmost site and a group of southern sites, possibly reflecting different isotopic baselines. This study is the first effort to provide useful insights into the trophic ecology of juvenile Atlantic goliath grouper in Brazil, which could help address knowledge gaps and conserve this endangered species. The nonlethal methodology employed in this study could be used to advance our understanding of the trophic ecology of other vulnerable and endangered marine fishes and help inform conservation and management practices.
大西洋歌利亚石斑鱼(Epinephelus itajara,列支敦士登,1822年)被世界自然保护联盟列为易危物种,由于过度捕捞和栖息地退化,其分布范围内的当地种群数量不断减少。由于它们的受保护地位,一些当地种群(包括巴西)缺乏可以为管理和保护提供信息的基本生活史信息。在本研究中,我们研究了大西洋歌利亚石斑鱼幼鱼鳍的δ15N如何随巴西四个河口的总长度变化,这是一种非致死方法。对100条大西洋歌利亚石斑鱼幼鱼(全长95 ~ 505 mm)进行了分析,发现δ15N与鱼长呈正相关(即营养生长的证据)。尽管最北端和最南端的δ15N值不同,但不同地点之间的营养生长是一致的,这可能反映了不同的同位素基线。这项研究首次为巴西大西洋歌利亚石斑鱼幼鱼的营养生态学提供了有用的见解,有助于解决知识空白和保护这一濒危物种。本研究采用的非致死性方法可以促进我们对其他脆弱和濒危海洋鱼类的营养生态学的理解,并有助于为保护和管理实践提供信息。
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引用次数: 2
Crown-of-thorns starfish outbreak at Taiping Island (Itu Aba), Spratlys, South China Sea 南海南沙群岛太平岛棘冠海星爆发
IF 1.5 4区 地球科学 Q2 Earth and Planetary Sciences Pub Date : 2021-01-01 DOI: 10.5343/bms.2021.0030
Wei Khang Heng, Ming-Jay Ho, C. Kuo, Ya-yi Huang, C. Ko, M. Jeng, Chaolun Allen Chen
Outbreak of crown-of-thorns sea stars, Acanthaster cf. solaris, were documented in coral reefs around Taiping Island, Spratlys for the first time. The outbreak might be thereason for the significant decline in live coral cover in 2021. Comprehensive monitoring through regional collaboration is needed.
首次在南沙太平岛附近的珊瑚礁中发现棘冠海星(Acanthaster cf. solaris)。这种爆发可能是2021年活珊瑚覆盖面积大幅下降的原因。需要通过区域合作进行全面监测。
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引用次数: 5
Reared to become wild-like: addressing behavioral and cognitive deficits in cultured aquatic animals destined for stocking into natural environments—a critical review 饲养成为野生动物:解决注定要放养到自然环境中的养殖水生动物的行为和认知缺陷
IF 1.5 4区 地球科学 Q2 Earth and Planetary Sciences Pub Date : 2021-01-01 DOI: 10.5343/bms.2020.0039
J. Näslund
Hatchery-reared aquatic animals tend to perform worse in natural environments than wild conspecifics. This was pointed out over a century ago and while there are many possible causes, one persistent observation is that unnatural rearing environments cause behavioral expressions unsuitable for a life in the wild. Behavioral traits being adaptive in barren, food-rich, and predator-free hatchery tanks likely differ from those being adaptive in nature. More recently, suspicions of cognitive deficiencies due to sensory deprivation have also been raised. Over the last few decades, substantial research has been devoted to produce more wild-like phenotypes in animals reared for stocking. This research includes life-skills training programs, where animals learn to cope with important features of the natural environment (e.g., live food and predation risk), and environmental modifications aimed at stimulating the formation of adequate cognitive and behavioral traits (e.g., environmental enrichment and reduction of the number of individuals per tank). The main purpose of this paper is to provide a summary of the current state-of-knowledge of interventions aimed at ameliorating cognitive and behavioral deficiencies in aquatic animals reared for stocking. Furthermore, it aims to provide a foundation to assist in the development of future questions, hypotheses, and experiments to eventually improve the postrelease performance of these animals.
孵化场饲养的水生动物在自然环境中的表现往往不如野生同种动物。这一点早在一个多世纪前就被指出了,虽然有许多可能的原因,但一个持续的观察是,不自然的饲养环境会导致不适合野外生活的行为表达。在贫瘠、食物丰富和无捕食者的孵化池中适应的行为特征可能与在自然界中适应的行为特征不同。最近,由于感觉剥夺引起的认知缺陷的怀疑也被提出。在过去的几十年里,大量的研究一直致力于在饲养的动物中产生更多的野生样表型。这项研究包括生活技能培训计划,在那里动物学习应对自然环境的重要特征(例如,活的食物和被捕食的风险),以及旨在刺激形成适当认知和行为特征的环境变化(例如,环境丰富和减少每个水箱的个体数量)。本文的主要目的是对目前有关改善放养水生动物认知和行为缺陷的干预措施进行总结。此外,它的目的是提供一个基础,协助发展未来的问题,假设和实验,最终提高这些动物的释放后性能。
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引用次数: 13
Revising geographic distributions of eastern Pacific moray eels 修订东太平洋海鳗的地理分布
IF 1.5 4区 地球科学 Q2 Earth and Planetary Sciences Pub Date : 2021-01-01 DOI: 10.5343/BMS.2020.0060
K. Dale, A. Ramírez-Valdez, J. Mccosker, M. Love
Under the influence of climate stressors, species distributions of fishes in the eastern Pacific are shifting, with many species moving poleward. Moray eels (family Muraenidae) are ecologically important predators inhabiting coastal reefs. Due to their cryptic nature and lack of commercial importance, the species distributions of muraenids in the tropical and subtropical eastern Pacific are poorly understood. Here, we document the geographic range size of 33 muraenid species in the eastern Pacific and also report a shift in the established population range of Muraena argus based on recent trapping efforts. We found that 17 species demonstrated shifts in geographic range size, including sampled-range expansions and new occurrences at offshore islands. Eleven species were observed in new biogeographic provinces, primarily in the northward direction to the San Diegan Province. Trapping data and local knowledge gathered from fishing cooperatives suggest that M. argus has established populations at least 300 km further north than previously reported. Both the yearly number of reported observations and geographic extent of sampling have increased over time, but the number of recorded extensions has not. These results highlight the importance of compiling data from diverse sources (including museum records, local ecological knowledge, and the non- English scientific literature) as well as the continued value of biodiversity surveys in the eastern Pacific.
在气候压力源的影响下,东太平洋鱼类的物种分布正在发生变化,许多物种向两极移动。海鳗(海鳗科)是栖息在沿海珊瑚礁上的重要生态捕食者。由于其隐秘性和缺乏商业价值,人们对热带和亚热带东太平洋muraenids的物种分布知之甚少。在这里,我们记录了东太平洋33种muraenid物种的地理范围大小,并报告了基于最近的诱捕工作,Muraena argus的既定种群范围发生了变化。我们发现17个物种在地理范围大小上发生了变化,包括采样范围的扩大和近海岛屿的新出现。在新的生物地理省发现了11种,主要分布在向北的圣地亚哥省。从渔业合作社收集的诱捕数据和当地知识表明,阿格乌斯鲷已经在比先前报道的至少向北300公里处建立了种群。每年报告的观测数量和采样的地理范围都随着时间的推移而增加,但记录的扩展数量却没有增加。这些结果强调了从不同来源(包括博物馆记录、当地生态知识和非英语科学文献)收集数据的重要性,以及东太平洋生物多样性调查的持续价值。
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引用次数: 1
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Bulletin of Marine Science
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