首页 > 最新文献

Stat最新文献

英文 中文
Documenting and communicating the contributions of embedded statisticians: Show me the value! 记录和宣传嵌入式统计人员的贡献:向我展示价值!
IF 1.7 4区 数学 Q4 Mathematics Pub Date : 2024-05-14 DOI: 10.1002/sta4.691
Terrie Vasilopoulos, Amy Crisp, Gerard Garvan, Keith Howell, Gregory Janelle, Cynthia Garvan
Academic research productivity relies upon the contribution of statisticians, who are typically clustered in statistics and biostatistics departments, isolated from clinical researchers. Most academic health centres have created consultation hubs or research incubators to make statisticians available for individual collaboration to support the clinical research enterprise. Additionally, some clinical departments within academic health centres have recognized the value in colocating statisticians within their clinical departments to improve availability for collaboration with physicians/researchers. Embedded statisticians encounter the same challenges of isolated statisticians regarding professional support and networking, mentorship and clear role expectations. While for all collaborative statisticians, it is important to effectively communicate value to both collaborators and supervisors, this may be especially problematic for embedded statisticians in clinical departments where their supervisors may not have backgrounds in research or statistics. Previous papers have reported valuable metrics for statisticians, particularly those associated with Biostatistics, Epidemiology and Research Design Cores. There is a knowledge gap regarding metrics tailored to meet the needs of the embedded statistician and clinical supervisors. This paper is a first step towards addressing this important need.In this paper, we explore (1) the critical role of collaborative statisticians and the benefits and challenges of the embedded statistician model, (2) the need for additional metrics specific to embedded statisticians which measure value and (3) how to design a value report. We offer a framework for evaluation of the contributions of the embedded statistician with the following domains: (1) collaboration, (2) research output/productivity, (3) mentoring and (4) education. Metrics that are particularly specific to embedded statisticians and that are not routinely captured include time from project initiation to completion/outcome, time from initial statistical consultation to statistical outcome completion and summary of level of contribution for manuscripts and presentations in addition to author order. We conclude with thoughts on future directions for development of metrics and reporting systems for statisticians embedded in clinical departments.
学术研究的生产力有赖于统计人员的贡献,而统计人员通常集中在统计和生物统计部门,与临床研究人员隔绝。大多数学术健康中心都建立了咨询中心或研究孵化器,使统计人员能够开展个人合作,为临床研究事业提供支持。此外,学术健康中心内的一些临床科室也认识到了将统计人员安置在临床科室内的价值,以便更好地与医生/研究人员开展合作。与孤立的统计人员相比,嵌入式统计人员在专业支持和网络、导师指导以及明确的角色期望方面也会遇到同样的挑战。对于所有合作的统计人员来说,向合作者和主管有效传达价值是非常重要的,但对于临床科室的嵌入式统计人员来说,这可能尤其成问题,因为他们的主管可能没有研究或统计方面的背景。以前的论文曾报道过对统计人员有价值的指标,尤其是那些与生物统计学、流行病学和研究设计核心相关的指标。目前,针对嵌入式统计员和临床督导需求而量身定制的衡量标准还存在知识空白。本文是满足这一重要需求的第一步。在本文中,我们探讨了:(1) 合作统计员的关键作用以及嵌入式统计员模式的益处和挑战;(2) 是否需要额外的嵌入式统计员专用指标来衡量价值;(3) 如何设计价值报告。我们为评估嵌入式统计员在以下领域的贡献提供了一个框架:(1) 合作;(2) 研究成果/生产力;(3) 指导;(4) 教育。特别针对嵌入式统计员的指标包括:从项目启动到完成/成果的时间、从最初统计咨询到统计成果完成的时间,以及除作者排序外的手稿和演讲贡献水平摘要。最后,我们对临床科室统计人员的指标和报告系统的未来发展方向进行了展望。
{"title":"Documenting and communicating the contributions of embedded statisticians: Show me the value!","authors":"Terrie Vasilopoulos, Amy Crisp, Gerard Garvan, Keith Howell, Gregory Janelle, Cynthia Garvan","doi":"10.1002/sta4.691","DOIUrl":"https://doi.org/10.1002/sta4.691","url":null,"abstract":"Academic research productivity relies upon the contribution of statisticians, who are typically clustered in statistics and biostatistics departments, isolated from clinical researchers. Most academic health centres have created consultation hubs or research incubators to make statisticians available for individual collaboration to support the clinical research enterprise. Additionally, some clinical departments within academic health centres have recognized the value in colocating statisticians within their clinical departments to improve availability for collaboration with physicians/researchers. Embedded statisticians encounter the same challenges of isolated statisticians regarding professional support and networking, mentorship and clear role expectations. While for all collaborative statisticians, it is important to effectively communicate value to both collaborators and supervisors, this may be especially problematic for embedded statisticians in clinical departments where their supervisors may not have backgrounds in research or statistics. Previous papers have reported valuable metrics for statisticians, particularly those associated with Biostatistics, Epidemiology and Research Design Cores. There is a knowledge gap regarding metrics tailored to meet the needs of the embedded statistician and clinical supervisors. This paper is a first step towards addressing this important need.In this paper, we explore (1) the critical role of collaborative statisticians and the benefits and challenges of the embedded statistician model, (2) the need for additional metrics specific to embedded statisticians which measure value and (3) how to design a value report. We offer a framework for evaluation of the contributions of the embedded statistician with the following domains: (1) collaboration, (2) research output/productivity, (3) mentoring and (4) education. Metrics that are particularly specific to embedded statisticians and that are not routinely captured include time from project initiation to completion/outcome, time from initial statistical consultation to statistical outcome completion and summary of level of contribution for manuscripts and presentations in addition to author order. We conclude with thoughts on future directions for development of metrics and reporting systems for statisticians embedded in clinical departments.","PeriodicalId":56159,"journal":{"name":"Stat","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-05-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140980076","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Do good: Strategies for leading an inclusive data science or statistics consulting team 做好事:领导包容性数据科学或统计咨询团队的策略
IF 1.7 4区 数学 Q4 Mathematics Pub Date : 2024-05-13 DOI: 10.1002/sta4.687
Christina Maimone, Julia L. Sharp, Ofira Schwartz‐Soicher, Jeffrey C. Oliver, Lencia Beltran
Leading a data science or statistical consulting team in an academic environment can have many challenges, including institutional infrastructure, funding and technical expertise. Even in the most challenging environment, however, leading such a team with inclusive practices can be rewarding for the leader, the team members and collaborators. We describe nine leadership and management practices that are especially relevant to the dynamics of data science or statistics consulting teams and an academic environment: ensuring people get credit, making tacit knowledge explicit, establishing clear performance review processes, championing career development, empowering team members to work autonomously, learning from diverse experiences, supporting team members in navigating power dynamics, having difficult conversations and developing foundational management skills. Active engagement in these areas will help those who lead data science or statistics consulting groups – whether faculty or staff, regardless of title – create and support inclusive teams.
在学术环境中领导一个数据科学或统计咨询团队可能会面临许多挑战,包括机构基础设施、资金和专业技术知识。然而,即使在最具挑战性的环境中,以包容性的实践领导这样的团队,也能为领导者、团队成员和合作者带来丰厚的回报。我们介绍了与数据科学或统计咨询团队的动态和学术环境特别相关的九项领导和管理实践:确保人们获得荣誉、使隐性知识显性化、建立明确的绩效考核流程、支持职业发展、赋予团队成员自主工作的权力、从不同的经验中学习、支持团队成员驾驭权力动态、进行艰难的对话以及发展基础管理技能。积极参与这些领域的工作将有助于那些领导数据科学或统计咨询小组的人员--无论是教职员工,还是任何职称的人员--创建并支持包容性团队。
{"title":"Do good: Strategies for leading an inclusive data science or statistics consulting team","authors":"Christina Maimone, Julia L. Sharp, Ofira Schwartz‐Soicher, Jeffrey C. Oliver, Lencia Beltran","doi":"10.1002/sta4.687","DOIUrl":"https://doi.org/10.1002/sta4.687","url":null,"abstract":"Leading a data science or statistical consulting team in an academic environment can have many challenges, including institutional infrastructure, funding and technical expertise. Even in the most challenging environment, however, leading such a team with inclusive practices can be rewarding for the leader, the team members and collaborators. We describe nine leadership and management practices that are especially relevant to the dynamics of data science or statistics consulting teams and an academic environment: ensuring people get credit, making tacit knowledge explicit, establishing clear performance review processes, championing career development, empowering team members to work autonomously, learning from diverse experiences, supporting team members in navigating power dynamics, having difficult conversations and developing foundational management skills. Active engagement in these areas will help those who lead data science or statistics consulting groups – whether faculty or staff, regardless of title – create and support inclusive teams.","PeriodicalId":56159,"journal":{"name":"Stat","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-05-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140936203","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
High‐dimensional differential networks with sparsity and reduced‐rank 具有稀疏性和降低秩的高维微分网络
IF 1.7 4区 数学 Q4 Mathematics Pub Date : 2024-05-13 DOI: 10.1002/sta4.690
Yao Wang, Cheng Wang, Binyan Jiang
Differential network analysis plays a crucial role in capturing nuanced changes in conditional correlations between two samples. Under the high‐dimensional setting, the differential network, that is, the difference between the two precision matrices are usually stylized with sparse signals and some low‐rank latent factors. Recognizing the distinctions inherent in the precision matrices of such networks, we introduce a novel approach, termed ‘SR‐Network’ for the estimation of sparse and reduced‐rank differential networks. This method directly assesses the differential network by formulating a convex empirical loss function with ‐norm and nuclear norm penalties. The study establishes finite‐sample error bounds for parameter estimation and highlights the superior performance of the proposed method through extensive simulations and real data studies. This research significantly contributes to the advancement of methodologies for accurate analysis of differential networks, particularly in the context of structures characterized by sparsity and low‐rank features.
差分网络分析在捕捉两个样本之间条件相关性的细微变化方面起着至关重要的作用。在高维环境下,差分网络(即两个精度矩阵之间的差异)通常由稀疏信号和一些低阶潜因构成。认识到此类网络精度矩阵的内在区别,我们引入了一种新方法,称为 "SR-网络",用于估计稀疏和低阶差分网络。这种方法通过制定带有-规范和核规范惩罚的凸经验损失函数,直接评估差分网络。该研究为参数估计建立了有限样本误差边界,并通过大量模拟和真实数据研究凸显了所提方法的优越性能。这项研究极大地促进了差分网络精确分析方法的发展,尤其是在具有稀疏性和低秩特征的结构中。
{"title":"High‐dimensional differential networks with sparsity and reduced‐rank","authors":"Yao Wang, Cheng Wang, Binyan Jiang","doi":"10.1002/sta4.690","DOIUrl":"https://doi.org/10.1002/sta4.690","url":null,"abstract":"Differential network analysis plays a crucial role in capturing nuanced changes in conditional correlations between two samples. Under the high‐dimensional setting, the differential network, that is, the difference between the two precision matrices are usually stylized with sparse signals and some low‐rank latent factors. Recognizing the distinctions inherent in the precision matrices of such networks, we introduce a novel approach, termed ‘SR‐Network’ for the estimation of sparse and reduced‐rank differential networks. This method directly assesses the differential network by formulating a convex empirical loss function with ‐norm and nuclear norm penalties. The study establishes finite‐sample error bounds for parameter estimation and highlights the superior performance of the proposed method through extensive simulations and real data studies. This research significantly contributes to the advancement of methodologies for accurate analysis of differential networks, particularly in the context of structures characterized by sparsity and low‐rank features.","PeriodicalId":56159,"journal":{"name":"Stat","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-05-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140941729","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Variational inference for the latent shrinkage position model 潜缩位置模型的变量推理
IF 1.7 4区 数学 Q4 Mathematics Pub Date : 2024-05-09 DOI: 10.1002/sta4.685
Xian Yao Gwee, Isobel Claire Gormley, Michael Fop
The latent position model (LPM) is a popular method used in network data analysis where nodes are assumed to be positioned in a ‐dimensional latent space. The latent shrinkage position model (LSPM) is an extension of the LPM which automatically determines the number of effective dimensions of the latent space via a Bayesian nonparametric shrinkage prior. However, the LSPM's reliance on Markov chain Monte Carlo for inference, while rigorous, is computationally expensive, making it challenging to scale to networks with large numbers of nodes. We introduce a variational inference approach for the LSPM, aiming to reduce computational demands while retaining the model's ability to intrinsically determine the number of effective latent dimensions. The performance of the variational LSPM is illustrated through simulation studies and its application to real‐world network data. To promote wider adoption and ease of implementation, we also provide open‐source code.
潜在位置模型(LPM)是网络数据分析中常用的一种方法,它假定节点位于一维潜在空间中。潜在收缩位置模型(LSPM)是 LPM 的扩展,它通过贝叶斯非参数收缩先验自动确定潜在空间的有效维数。然而,LSPM 依靠马尔科夫链蒙特卡洛进行推理,虽然严谨,但计算成本高昂,使其难以扩展到具有大量节点的网络。我们为 LSPM 引入了一种变异推理方法,旨在减少计算需求,同时保留模型内在确定有效潜维数的能力。通过模拟研究及其在真实世界网络数据中的应用,说明了变异 LSPM 的性能。为了促进更广泛的应用和便于实施,我们还提供了开放源代码。
{"title":"Variational inference for the latent shrinkage position model","authors":"Xian Yao Gwee, Isobel Claire Gormley, Michael Fop","doi":"10.1002/sta4.685","DOIUrl":"https://doi.org/10.1002/sta4.685","url":null,"abstract":"The latent position model (LPM) is a popular method used in network data analysis where nodes are assumed to be positioned in a ‐dimensional latent space. The latent shrinkage position model (LSPM) is an extension of the LPM which automatically determines the number of effective dimensions of the latent space via a Bayesian nonparametric shrinkage prior. However, the LSPM's reliance on Markov chain Monte Carlo for inference, while rigorous, is computationally expensive, making it challenging to scale to networks with large numbers of nodes. We introduce a variational inference approach for the LSPM, aiming to reduce computational demands while retaining the model's ability to intrinsically determine the number of effective latent dimensions. The performance of the variational LSPM is illustrated through simulation studies and its application to real‐world network data. To promote wider adoption and ease of implementation, we also provide open‐source code.","PeriodicalId":56159,"journal":{"name":"Stat","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-05-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140936205","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A guide to successful management of collaborative partnerships in quantitative research: An illustration of the science of team science 成功管理定量研究中的合作伙伴关系指南:团队科学说明
IF 1.7 4区 数学 Q4 Mathematics Pub Date : 2024-05-09 DOI: 10.1002/sta4.674
Alyssa Platt, Tracy Truong, Mary Boulos, Nichole E. Carlson, Manisha Desai, Monica M. Elam, Emily Slade, Alexandra L. Hanlon, Jillian H. Hurst, Maren K. Olsen, Laila M. Poisson, Lacey Rende, Gina‐Maria Pomann
Data‐intensive research continues to expand with the goal of improving healthcare delivery, clinical decision‐making, and patient outcomes. Quantitative scientists, such as biostatisticians, epidemiologists, and informaticists, are tasked with turning data into health knowledge. In academic health centres, quantitative scientists are critical to the missions of biomedical discovery and improvement of health. Many academic health centres have developed centralized Quantitative Science Units which foster dual goals of professional development of quantitative scientists and producing high quality, reproducible domain research. Such units then develop teams of quantitative scientists who can collaborate with researchers. However, existing literature does not provide guidance on how such teams are formed or how to manage and sustain them. Leaders of Quantitative Science Units across six institutions formed a working group to examine common practices and tools that can serve as best practices for Quantitative Science Units that wish to achieve these dual goals through building long‐term partnerships with researchers. The results of this working group are presented to provide tools and guidance for Quantitative Science Units challenged with developing, managing, and evaluating Quantitative Science Teams. This guidance aims to help Quantitative Science Units effectively participate in and enhance the research that is conducted throughout the academic health centre—shaping their resources to fit evolving research needs.
数据密集型研究不断扩大,其目标是改善医疗服务、临床决策和患者疗效。定量科学家,如生物统计学家、流行病学家和信息学家,负责将数据转化为健康知识。在学术健康中心,定量科学家对生物医学发现和改善健康状况的使命至关重要。许多学术健康中心都建立了中央定量科学部门,以促进定量科学家的专业发展和开展高质量、可重复的领域研究为双重目标。这些单位随后发展了可与研究人员合作的定量科学家团队。然而,现有文献并未就如何组建此类团队或如何管理和维持团队提供指导。六所院校定量科学部门的领导组成了一个工作小组,研究共同的实践和工具,作为希望通过与研究人员建立长期合作关系来实现上述双重目标的定量科学部门的最佳实践。本报告介绍了该工作组的成果,旨在为面临发展、管理和评估定量科学团队挑战的定量科学部门提供工具和指导。该指南旨在帮助定量科学部门有效地参与并加强整个学术健康中心的研究工作--根据不断变化的研究需求调整其资源。
{"title":"A guide to successful management of collaborative partnerships in quantitative research: An illustration of the science of team science","authors":"Alyssa Platt, Tracy Truong, Mary Boulos, Nichole E. Carlson, Manisha Desai, Monica M. Elam, Emily Slade, Alexandra L. Hanlon, Jillian H. Hurst, Maren K. Olsen, Laila M. Poisson, Lacey Rende, Gina‐Maria Pomann","doi":"10.1002/sta4.674","DOIUrl":"https://doi.org/10.1002/sta4.674","url":null,"abstract":"Data‐intensive research continues to expand with the goal of improving healthcare delivery, clinical decision‐making, and patient outcomes. Quantitative scientists, such as biostatisticians, epidemiologists, and informaticists, are tasked with turning data into health knowledge. In academic health centres, quantitative scientists are critical to the missions of biomedical discovery and improvement of health. Many academic health centres have developed centralized Quantitative Science Units which foster dual goals of professional development of quantitative scientists and producing high quality, reproducible domain research. Such units then develop teams of quantitative scientists who can collaborate with researchers. However, existing literature does not provide guidance on how such teams are formed or how to manage and sustain them. Leaders of Quantitative Science Units across six institutions formed a working group to examine common practices and tools that can serve as best practices for Quantitative Science Units that wish to achieve these dual goals through building long‐term partnerships with researchers. The results of this working group are presented to provide tools and guidance for Quantitative Science Units challenged with developing, managing, and evaluating Quantitative Science Teams. This guidance aims to help Quantitative Science Units effectively participate in and enhance the research that is conducted throughout the academic health centre—shaping their resources to fit evolving research needs.","PeriodicalId":56159,"journal":{"name":"Stat","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-05-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140936210","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
An optimal exact interval for the risk ratio in the 2×2$$ 2times 2 $$ table with structural zero 具有结构零的 2×2$$ 2 次 2 $$ 表中风险比的最佳精确区间
IF 1.7 4区 数学 Q4 Mathematics Pub Date : 2024-05-08 DOI: 10.1002/sta4.681
Weizhen Wang, Xingyun Cao, Tianfa Xie
The table with a structural zero represents a common scenario in clinical trials and epidemiology, characterized by a specific empty cell. In such cases, the risk ratio serves as a vital parameter for statistical inference. However, existing confidence intervals, such as those constructed through the score test and Bayesian methods, fail to achieve the prescribed nominal level. Our focus is on numerically constructing exact confidence intervals for the risk ratio. We achieve this by optimally combining the modified inferential model method and the ‐function method. The resulting interval is then compared with intervals generated by four existing methods: the score method, the exact score method, the Bayesian tailed‐based method and the inferential model method. This comparison is conducted based on the infimum coverage probability, average interval length and non‐coverage probability criteria. Remarkably, our proposed interval outperforms other exact intervals, being notably shorter. To illustrate the effectiveness of our approach, we discuss two examples in detail.
结构为零的表格是临床试验和流行病学中常见的一种情况,其特点是有一个特定的空单元格。在这种情况下,风险比是统计推断的重要参数。然而,现有的置信区间,如通过分数检验和贝叶斯方法构建的置信区间,都无法达到规定的名义水平。我们的重点是用数字构建风险比的精确置信区间。我们通过优化组合修正推理模型法和-函数法来实现这一目标。然后将得到的置信区间与四种现有方法生成的置信区间进行比较:得分法、精确得分法、基于贝叶斯尾数法和推理模型法。这种比较是基于最小覆盖概率、平均区间长度和非覆盖概率标准进行的。值得注意的是,我们提出的区间优于其他精确区间,明显更短。为了说明我们的方法的有效性,我们详细讨论了两个例子。
{"title":"An optimal exact interval for the risk ratio in the 2×2$$ 2times 2 $$ table with structural zero","authors":"Weizhen Wang, Xingyun Cao, Tianfa Xie","doi":"10.1002/sta4.681","DOIUrl":"https://doi.org/10.1002/sta4.681","url":null,"abstract":"The table with a structural zero represents a common scenario in clinical trials and epidemiology, characterized by a specific empty cell. In such cases, the risk ratio serves as a vital parameter for statistical inference. However, existing confidence intervals, such as those constructed through the score test and Bayesian methods, fail to achieve the prescribed nominal level. Our focus is on numerically constructing exact confidence intervals for the risk ratio. We achieve this by optimally combining the modified inferential model method and the ‐function method. The resulting interval is then compared with intervals generated by four existing methods: the score method, the exact score method, the Bayesian tailed‐based method and the inferential model method. This comparison is conducted based on the infimum coverage probability, average interval length and non‐coverage probability criteria. Remarkably, our proposed interval outperforms other exact intervals, being notably shorter. To illustrate the effectiveness of our approach, we discuss two examples in detail.","PeriodicalId":56159,"journal":{"name":"Stat","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-05-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140936202","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
On quantifying heterogeneous treatment effects with regression‐based individualized treatment rules: Loss function families and bounds on estimation error 用基于回归的个体化治疗规则量化异质性治疗效果:损失函数族和估计误差的界限
IF 1.7 4区 数学 Q4 Mathematics Pub Date : 2024-05-08 DOI: 10.1002/sta4.680
Michael T. Gorczyca, Chaeryon Kang
SummaryHeterogeneity in response to treatment is a pervasive problem in medicine. Many researchers have proposed individualized treatment rule methods for this problem, which personalize treatment recommendations based on an individual's recorded covariates. A challenge with using these methods in practice is that they determine a treatment rule, rather than quantify treatment benefit. This can be problematic, as a recommended treatment could be burdensome and have negligible improvements in outcome for some individuals. With the aim of helping practitioners make informed modelling choices, we identify two families of loss functions to use with individualized treatment rule methods. Under the assumption of correct model specification, estimation with a loss function from one family ensures that the model's treatment recommendations can be interpreted in terms of the risk difference, while the other family of loss functions ensures that the model's treatment recommendations can be interpreted in terms of the risk ratio. We also derive two upper bounds for a model's error in risk difference and risk ratio estimation. Each upper bound can be calculated using observed data and can provide insight to practitioners regarding model error in estimating treatment effects. We illustrate our contributions with simulation studies as well as with data from the ACTG‐175 AIDS study.
摘要对治疗反应的异质性是医学界普遍存在的问题。许多研究人员针对这一问题提出了个体化治疗规则方法,即根据个人记录的协变量提出个性化治疗建议。在实践中使用这些方法面临的一个挑战是,它们确定的是治疗规则,而不是量化治疗效果。这可能会造成问题,因为推荐的治疗方法可能会给某些人带来负担,而且对治疗效果的改善微乎其微。为了帮助实践者做出明智的建模选择,我们确定了两个损失函数系列,供个体化治疗规则方法使用。在模型规范正确的假设下,使用其中一个系列的损失函数进行估计,可确保模型的治疗建议可以用风险差异来解释,而另一个系列的损失函数则可确保模型的治疗建议可以用风险比来解释。我们还推导出了模型在风险差异和风险比率估计中的两个误差上限。每个上限都可以通过观察到的数据计算出来,并为实践者提供有关模型在估计治疗效果时的误差的见解。我们通过模拟研究以及 ACTG-175 艾滋病研究的数据来说明我们的贡献。
{"title":"On quantifying heterogeneous treatment effects with regression‐based individualized treatment rules: Loss function families and bounds on estimation error","authors":"Michael T. Gorczyca, Chaeryon Kang","doi":"10.1002/sta4.680","DOIUrl":"https://doi.org/10.1002/sta4.680","url":null,"abstract":"SummaryHeterogeneity in response to treatment is a pervasive problem in medicine. Many researchers have proposed individualized treatment rule methods for this problem, which personalize treatment recommendations based on an individual's recorded covariates. A challenge with using these methods in practice is that they determine a treatment rule, rather than quantify treatment benefit. This can be problematic, as a recommended treatment could be burdensome and have negligible improvements in outcome for some individuals. With the aim of helping practitioners make informed modelling choices, we identify two families of loss functions to use with individualized treatment rule methods. Under the assumption of correct model specification, estimation with a loss function from one family ensures that the model's treatment recommendations can be interpreted in terms of the risk difference, while the other family of loss functions ensures that the model's treatment recommendations can be interpreted in terms of the risk ratio. We also derive two upper bounds for a model's error in risk difference and risk ratio estimation. Each upper bound can be calculated using observed data and can provide insight to practitioners regarding model error in estimating treatment effects. We illustrate our contributions with simulation studies as well as with data from the ACTG‐175 AIDS study.","PeriodicalId":56159,"journal":{"name":"Stat","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-05-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140942412","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Methods for building a staff workforce of quantitative scientists in academic health care 建立学术医疗定量科学家队伍的方法
IF 1.7 4区 数学 Q4 Mathematics Pub Date : 2024-05-06 DOI: 10.1002/sta4.683
Sarah Peskoe, Emily Slade, Lacey Rende, Mary Boulos, Manisha Desai, Mihir Gandhi, Jonathan A. L. Gelfond, Shokoufeh Khalatbari, Phillip J. Schulte, Denise C. Snyder, Sandra L. Taylor, Jesse D. Troy, Roger Vaughan, Gina‐Maria Pomann
Collaborative quantitative scientists, including biostatisticians, epidemiologists, bioinformaticists, and data‐related professionals, play vital roles in research, from study design to data analysis and dissemination. It is imperative that academic health care centers (AHCs) establish an environment that provides opportunities for the quantitative scientists who are hired as staff to develop and advance their careers. With the rapid growth of clinical and translational research, AHCs are charged with establishing organizational methods, training tools, best practices, and guidelines to accelerate and support hiring, training, and retaining this staff workforce. This paper describes three essential elements for building and maintaining a successful unit of collaborative staff quantitative scientists in academic health care centers: (1) organizational infrastructure and management, (2) recruitment, and (3) career development and retention. Specific strategies are provided as examples of how AHCs can excel in these areas.
合作的定量科学家,包括生物统计学家、流行病学家、生物信息学家以及与数据相关的专业人员,在从研究设计到数据分析和传播的整个研究过程中发挥着至关重要的作用。学术医疗中心(AHC)必须营造一种环境,为受聘为员工的定量科学家提供发展和晋升的机会。随着临床和转化研究的快速发展,学术医疗中心有责任建立组织方法、培训工具、最佳实践和指导方针,以加快并支持聘用、培训和留住这支员工队伍。本文介绍了在学术医疗中心建立和维持一支成功的定量科学家协作队伍的三个基本要素:(1) 组织基础设施和管理,(2) 招聘,(3) 职业发展和保留。本文提供了具体的策略,作为学术医疗中心如何在这些领域取得优异成绩的范例。
{"title":"Methods for building a staff workforce of quantitative scientists in academic health care","authors":"Sarah Peskoe, Emily Slade, Lacey Rende, Mary Boulos, Manisha Desai, Mihir Gandhi, Jonathan A. L. Gelfond, Shokoufeh Khalatbari, Phillip J. Schulte, Denise C. Snyder, Sandra L. Taylor, Jesse D. Troy, Roger Vaughan, Gina‐Maria Pomann","doi":"10.1002/sta4.683","DOIUrl":"https://doi.org/10.1002/sta4.683","url":null,"abstract":"Collaborative quantitative scientists, including biostatisticians, epidemiologists, bioinformaticists, and data‐related professionals, play vital roles in research, from study design to data analysis and dissemination. It is imperative that academic health care centers (AHCs) establish an environment that provides opportunities for the quantitative scientists who are hired as staff to develop and advance their careers. With the rapid growth of clinical and translational research, AHCs are charged with establishing organizational methods, training tools, best practices, and guidelines to accelerate and support hiring, training, and retaining this staff workforce. This paper describes three essential elements for building and maintaining a successful unit of collaborative staff quantitative scientists in academic health care centers: (1) organizational infrastructure and management, (2) recruitment, and (3) career development and retention. Specific strategies are provided as examples of how AHCs can excel in these areas.","PeriodicalId":56159,"journal":{"name":"Stat","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-05-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140883732","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Considerations in developing a financial model for an academic statistical consulting centre 为学术统计咨询中心制定财务模式的考虑因素
IF 1.7 4区 数学 Q4 Mathematics Pub Date : 2024-05-02 DOI: 10.1002/sta4.688
Christy Brown, Yanming Di, Stacey Slone
In operating an academic statistical consulting centre, it is essential to develop a strategy for covering the anticipated costs incurred, such as personnel, facilities, third‐party data, professional development and marketing, and for handling the revenues generated from sources such as university commitments, extramural grants, fees for service, internal memorandums of understanding and consulting courses. As such, this article describes each of these costs and revenue sources in turn, discusses how they vary over phases of a project and life cycles of a centre, provides a review of both historical and modern perspectives in the literature and includes illustrative examples of financial models from three different institutions. These points of consideration are meant to inform consulting groups who are interested in becoming either more or less centrally structured.
在运营学术统计咨询中心时,必须制定一项战略,以支付预期产生的成本,如人员、设施、第三方数据、专业发展和市场营销,并处理从大学承诺、校外赠款、服务费、内部谅解备忘录和咨询课程等来源产生的收入。因此,本文将逐一介绍这些成本和收入来源,讨论它们在项目的不同阶段和中心的生命周期中如何变化,对文献中的历史和现代观点进行回顾,并包括三个不同机构的财务模型示例。这些思考要点旨在为有意采用或不采用中央结构的咨询团体提供参考。
{"title":"Considerations in developing a financial model for an academic statistical consulting centre","authors":"Christy Brown, Yanming Di, Stacey Slone","doi":"10.1002/sta4.688","DOIUrl":"https://doi.org/10.1002/sta4.688","url":null,"abstract":"In operating an academic statistical consulting centre, it is essential to develop a strategy for covering the anticipated costs incurred, such as personnel, facilities, third‐party data, professional development and marketing, and for handling the revenues generated from sources such as university commitments, extramural grants, fees for service, internal memorandums of understanding and consulting courses. As such, this article describes each of these costs and revenue sources in turn, discusses how they vary over phases of a project and life cycles of a centre, provides a review of both historical and modern perspectives in the literature and includes illustrative examples of financial models from three different institutions. These points of consideration are meant to inform consulting groups who are interested in becoming either more or less centrally structured.","PeriodicalId":56159,"journal":{"name":"Stat","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140833310","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Maximum a posteriori estimation in graphical models using local linear approximation 利用局部线性近似在图形模型中进行最大后验估计
IF 1.7 4区 数学 Q4 Mathematics Pub Date : 2024-05-01 DOI: 10.1002/sta4.682
Ksheera Sagar, Jyotishka Datta, Sayantan Banerjee, Anindya Bhadra
Sparse structure learning in high‐dimensional Gaussian graphical models is an important problem in multivariate statistical inference, since the sparsity pattern naturally encodes the conditional independence relationship among variables. However, maximum a posteriori (MAP) estimation is challenging under hierarchical prior models, and traditional numerical optimization routines or expectation–maximization algorithms are difficult to implement. To this end, our contribution is a novel local linear approximation scheme that circumvents this issue using a very simple computational algorithm. Most importantly, the condition under which our algorithm is guaranteed to converge to the MAP estimate is explicitly stated and is shown to cover a broad class of completely monotone priors, including the graphical horseshoe. Further, the resulting MAP estimate is shown to be sparse and consistent in the ‐norm. Numerical results validate the speed, scalability and statistical performance of the proposed method.
高维高斯图形模型中的稀疏结构学习是多元统计推断中的一个重要问题,因为稀疏模式自然地编码了变量之间的条件独立性关系。然而,在分层先验模型下,最大后验(MAP)估计具有挑战性,传统的数值优化程序或期望最大化算法难以实现。为此,我们提出了一种新颖的局部线性近似方案,利用非常简单的计算算法规避了这一问题。最重要的是,我们明确提出了保证算法收敛到 MAP 估计值的条件,并证明该条件涵盖了包括图形马蹄在内的一大类完全单调先验。此外,还证明了所得到的 MAP 估计值是稀疏的,并且在-正态下是一致的。数值结果验证了所提方法的速度、可扩展性和统计性能。
{"title":"Maximum a posteriori estimation in graphical models using local linear approximation","authors":"Ksheera Sagar, Jyotishka Datta, Sayantan Banerjee, Anindya Bhadra","doi":"10.1002/sta4.682","DOIUrl":"https://doi.org/10.1002/sta4.682","url":null,"abstract":"Sparse structure learning in high‐dimensional Gaussian graphical models is an important problem in multivariate statistical inference, since the sparsity pattern naturally encodes the conditional independence relationship among variables. However, maximum a posteriori (MAP) estimation is challenging under hierarchical prior models, and traditional numerical optimization routines or expectation–maximization algorithms are difficult to implement. To this end, our contribution is a novel local linear approximation scheme that circumvents this issue using a very simple computational algorithm. Most importantly, the condition under which our algorithm is guaranteed to converge to the MAP estimate is explicitly stated and is shown to cover a broad class of completely monotone priors, including the graphical horseshoe. Further, the resulting MAP estimate is shown to be sparse and consistent in the ‐norm. Numerical results validate the speed, scalability and statistical performance of the proposed method.","PeriodicalId":56159,"journal":{"name":"Stat","volume":null,"pages":null},"PeriodicalIF":1.7,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140833216","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Stat
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1