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Risk factors associated with syphilis among patients at a sexual health center in Brazil: A retrospective study 巴西性健康中心患者中与梅毒相关的危险因素:一项回顾性研究
IF 3 4区 医学 Q2 INFECTIOUS DISEASES Pub Date : 2025-06-28 DOI: 10.1016/j.bjid.2025.104558
Cristhiane Campos Marques , Fabiana Nunes de Carvalho Mariz , Thaisa Campos Marques , Juliana Tessari Dias Rohr , Berenice Moreira , Paula Beatriz Santiago , Nathália Araujo Varela da Costa , Juliana Marques de Oliveira , Otávio Toledo Nóbrega , Carla Nunes de Araújo
Syphilis has reemerged worldwide, and knowledge about at-risk populations can assist in disease prevention and control. This study aimed to estimate the prevalence of syphilis among attendees at a Brazilian sexual health center and explore the association between sociodemographic and sexual behavioral factors with syphilis infection. A cross-sectional study was conducted at a Counselling and Testing Center (CTC) in Goiás, Brazil. We collected data from January to December 2018 to conduct a population-based study. Of 3526 patient records included in the analysis, 344 (9.8 %) belonged to participants who had syphilis, mainly at the age of 20 to 39 years old (63.1 %, p = 0.0683) and not married (62.1 %, p = 0.0042). Individuals who reported having homosexual relationships (Odds Ratio [OR = 2.93], p < 0.0001), previous sexually transmitted infections (OR = 2.36, p < 0.0001), and use of drugs (OR = 1.29, p < 0.0001) were more frequently diagnosed with the disease. Among patients with syphilis, MSM had a higher HIV co-infection rate (OR = 2.37, p = 0.0195) and also higher co-infection rates with other previous STIs (OR = 2.84, p = 0.00883). A high prevalence of syphilis among patients who attended the CTC in Goiás was revealed. Effective control of syphilis among populations at higher risk needs to be addressed to achieve disease control in Brazil.
梅毒在世界范围内重新出现,对高危人群的了解有助于疾病的预防和控制。本研究旨在估计巴西性健康中心参与者中梅毒的患病率,并探讨社会人口统计学和性行为因素与梅毒感染之间的关系。在巴西Goiás的咨询和测试中心(CTC)进行了一项横断面研究。我们收集了2018年1月至12月的数据,进行了一项基于人群的研究。在纳入分析的3526例患者记录中,344例(9.8%)属于梅毒患者,主要是20至39岁(63.1%,p = 0.0683)和未婚(62.1%,p = 0.0042)。报告有同性恋关系的个体(优势比[OR = 2.93], p <;0.0001),既往性传播感染(OR = 2.36, p <;0.0001)和药物使用(OR = 1.29, p <;0.0001)更常被诊断为该疾病。梅毒患者中,男男性行为者HIV合并感染率较高(OR = 2.37, p = 0.0195),与其他性传播感染合并感染率较高(OR = 2.84, p = 0.00883)。在Goiás参加CTC的患者中发现了梅毒的高患病率。为在巴西实现疾病控制,需要在高风险人群中有效控制梅毒。
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引用次数: 0
SARS-CoV-2 sublineages recovered from southern Brazilian cases during Omicron wave in 2023, early introduction of JN.1 SARS-CoV-2亚谱系在2023年欧米克隆波期间从巴西南部病例中恢复,早期引入了jn1
IF 3 4区 医学 Q2 INFECTIOUS DISEASES Pub Date : 2025-06-25 DOI: 10.1016/j.bjid.2025.104557
Mellanie Fontes-Dutra , Micheli Filippi , Meriane Demoliner , Alexandre Sita , Fernando Rosado Spilki
Since the emergence of the novel coronavirus SARS-CoV-2, public health measures have adapted as the virus evolve and acquired greater transmissibility and escape from the previous immune response. Genomic surveillance is a reliable and decisive tool for monitoring the evolutionary dynamics of the virus and its nucleotide diversity. Rio Grande do Sul is a southern Brazilian state that borders Argentina and Uruguay, and genomic and epidemiological surveillance led to early detection of COVID-19 variants, as seen in P.1 lineage. The study aimed to investigate the genetic characterization of SARS-CoV-2 Omicron sublineages in Rio Grande do Sul, Brazil, during 2023. By obtaining viral RNA from nasopharyngeal swabs positive for SARS-CoV-2, we performed high-throughput sequencing and data were analyzed using bioinformatic approaches. Our results revealed a dynamic change in Omicron sublineages during 2023, with the occurrence of JN.1+JN.1* reads during December 2023, parallel to the first JN.1 official record in Brazil, occurred in Ceará state, which is in the northeast region of Brazil. These data revealed a distinct nucleotide diversity in S gene of JN.1 reads, highlighting the importance of genomic surveillance in Rio Grande do Sul for the early detection of the entry of future SARS-CoV-2 variants into Brazil.
自新型冠状病毒SARS-CoV-2出现以来,随着病毒的进化,公共卫生措施已经做出了调整,并获得了更大的传播能力,并摆脱了先前的免疫反应。基因组监测是监测病毒进化动态及其核苷酸多样性的可靠和决定性工具。南大德州是巴西南部的一个州,与阿根廷和乌拉圭接壤,基因组和流行病学监测导致早期发现了COVID-19变体,如在P.1谱系中所见。该研究旨在调查2023年巴西巴西大德州里约热内卢地区SARS-CoV-2基因组亚系的遗传特征。通过从SARS-CoV-2阳性的鼻咽拭子中获取病毒RNA,我们进行了高通量测序,并使用生物信息学方法对数据进行了分析。我们的研究结果显示,在2023年期间,随着JN.1+JN的发生,Omicron亚系发生了动态变化。1*读数在2023年12月,与巴西的第一个JN.1官方记录平行,发生在巴西东北部地区的塞埃尔州。这些数据揭示了JN.1 reads中S基因的明显核苷酸多样性,突出了巴西大德州里约热内卢基因组监测对于早期发现未来SARS-CoV-2变体进入巴西的重要性。
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引用次数: 0
Emergency and persistence of Escherichia coli ST131 as community-onset antimicrobial resistant urinary tract infection in Rio de Janeiro, Brazil 在巴西里约热内卢,大肠杆菌ST131作为社区发病的抗微生物药物耐药性尿路感染的紧迫性和持久性
IF 3 4区 医学 Q2 INFECTIOUS DISEASES Pub Date : 2025-06-14 DOI: 10.1016/j.bjid.2025.104555
Eduardo Moreira de Castro , Isadora Silva Barcellos , Guilherme Santoro-Lopes , Ana Paula de Souza da Silva , Luís Guilherme de Araújo Longo , Mariana Anjo Barbosa , Gabriela Camarano de Oliveira , Lucas Cecílio Vilar , Adriana Lúcia Pires Ferreira , Karla Rodrigues Miranda , Beatriz Meurer Moreira
Urinary Tract Infections (UTI) are among the most common public health problems worldwide, mostly caused by Escherichia coli. High-risk pandemic clones, especially ST131, are known for their association with multidrug resistance. A better understanding of epidemiologic and molecular characteristics may provide insights into the dissemination and evolution of this pathogen. The present study aims to investigate selected clonal characteristics of a large collection of UTI-causing E. coli isolates from Rio de Janeiro, an urban center in Brazil. We set up a collection of 992 E. coli isolates from patients with UTI in 2019. We determined antimicrobial susceptibility, Extended Spectrum Betalactamase (ESBL) production and clonal composition of isolates and compared results with data from 2015. Frequencies of four most isolated pandemic clones (ST131, ST69, ST73 and ST95) were determined by PCR; ST131 clades were determined by PCR and fimH gene sequence; ESBL-producing isolates underwent MLST. Resistance frequencies were > 30 % for ampicillin and ciprofloxacin. ST131 isolates were the most frequent clone (14 %), increasing significantly from 2015, comprising 52 % of all ESBL-producing strains. Clade C formed most ST131 isolates (56 %), including 40 % of all ESBL-producing isolates, most in Clade C2; almost all fimH30. ST131, formed by heterogeneous lineages, was established as a major source of ESBL isolates in the community, with a major contribution to antimicrobial resistant UTI.
尿路感染(UTI)是世界范围内最常见的公共卫生问题之一,主要由大肠杆菌引起。众所周知,高风险大流行克隆,特别是ST131,与多药耐药性有关。更好地了解流行病学和分子特征可能有助于深入了解这种病原体的传播和进化。本研究旨在研究从巴西城市中心里约热内卢里约热内卢分离的大量引起尿路感染的大肠杆菌的克隆特征。我们收集了2019年从尿路感染患者中分离的992株大肠杆菌。我们检测了分离株的抗菌敏感性、扩展谱β -内酰胺酶(ESBL)产量和克隆组成,并将结果与2015年的数据进行了比较。采用PCR法测定了4个分离最多的大流行克隆(ST131、ST69、ST73和ST95)的频率;通过PCR和fimH基因序列测定ST131支系;产生esbl的分离株进行MLST。电阻频率为>;氨苄西林和环丙沙星30%。ST131分离株是最常见的克隆(14%),较2015年显著增加,占所有产esbl菌株的52%。进化支C形成了大多数ST131分离株(56%),包括所有产生esbl的分离株的40%,大部分在进化支C2;几乎所有的时间。由异质谱系形成的ST131被确定为社区中ESBL分离株的主要来源,对耐药UTI有重要贡献。
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引用次数: 0
Neurological manifestations of acute SARS-CoV-2 infection in a reference hospital in Bahia, Brazil 巴西巴伊亚州某参考医院急性SARS-CoV-2感染的神经学表现
IF 3 4区 医学 Q2 INFECTIOUS DISEASES Pub Date : 2025-05-26 DOI: 10.1016/j.bjid.2025.104542
Jesângeli de Sousa Dias , Maria Augusta Moreira Rebouças , Lilian Verena da Silva Carvalho , Thais Sampaio Silva , Jair Santana dos Santos , Astrid Xiomara Tatiana Otero Melendez , Carlos Brites

Background

Neurologic manifestations of Coronavirus Disease-19 (COVID-19) have been associated with patients’ disease severity and outcome. This study aimed to describe the frequency and characteristics of the neurological manifestations in a group of hospitalized individuals with COVID-19 and their associations with patient outcomes.

Methods

Patients aged 18 years or older admitted to a local hospital between April and June 2020 with SARS-CoV-2 detected by RT-PCR were included in this retrospective observational study. The characteristics of participants were collected from electronic medical records using a structured questionnaire. A Poisson regression model was used to examine the influence of neurological manifestations on mortality.

Results

A total of 305 participants with COVID-19 were included, with 57.7 % of them presenting neurological symptoms. There were 62 (20.3 %) individuals with acute encephalopathy, with a mean age of 65.5 ± 15.9 years. In this group, higher Prevalence Ratios (PR) of comorbidities (1.6) and severe disease (3.6) were present, predisposing factors for acute encephalopathy. They were also more likely to be admitted to the intensive care unit (3.1) and to die (2.4). The median Neutrophil-Lymphocyte Ratio (NLR) was 7 (Interquartile Range [IQR: 4‒12]). Fifty-two (17 %) participants presented chemosensory dysfunction, with a mean age 53.3 ± 14 years and a lower PR of comorbidity (0.8) than those without. The severe diseases’ PR was slightly higher (1.1), but the PR of ICU admission (0.7), and deaths (0.4) was lower. The LNR was 3.8 (IQR: 2.2–7.8). Poisson regression analysis revealed that severe illness (PR = 3.13), cardiopathy (PR = 1.65), acute encephalopathy (PR = 1.49), diabetes (PR = 1.46), and neutrophil-lymphocyte ratio (PR = 1.04) were associated with death. Conversely, having chemosensory disorders (PR = 0.44) and a prolonged hospital stay (PR = 0.96) were associated with survival.

Conclusion

Patients with acute encephalopathy had more severe forms of COVID-19 and higher mortality. In contrast, chemosensory dysfunction was associated with milder disease manifestations and a better prognosis.
背景:新型冠状病毒病-19 (COVID-19)的神经系统表现与患者疾病严重程度和预后相关。本研究旨在描述一组COVID-19住院患者神经系统表现的频率和特征及其与患者预后的关系。方法回顾性观察研究纳入2020年4月至6月在当地医院住院的18岁及以上的RT-PCR检测到SARS-CoV-2的患者。使用结构化问卷从电子病历中收集参与者的特征。用泊松回归模型检验神经学表现对死亡率的影响。结果共纳入305例新冠肺炎患者,其中57.7%出现神经系统症状。急性脑病62例(20.3%),平均年龄65.5±15.9岁。在该组中,存在较高的合并症患病率(PR)(1.6)和严重疾病患病率(3.6),这是急性脑病的易感因素。他们也更有可能进入重症监护病房(3.1)和死亡(2.4)。中性粒细胞与淋巴细胞比值(NLR)中位数为7(四分位间距[IQR: 4-12])。52名(17%)参与者出现化学感觉功能障碍,平均年龄53.3±14岁,共病的PR(0.8)低于无患者。重症PR略高(1.1),但ICU住院PR(0.7)和死亡PR(0.4)较低。LNR为3.8 (IQR: 2.2-7.8)。泊松回归分析显示,重症(PR = 3.13)、心脏病(PR = 1.65)、急性脑病(PR = 1.49)、糖尿病(PR = 1.46)和中性粒细胞淋巴细胞比(PR = 1.04)与死亡相关。相反,有化学感觉障碍(PR = 0.44)和长期住院(PR = 0.96)与生存率相关。结论急性脑病患者新型冠状病毒感染形式更严重,病死率更高。相比之下,化学感觉功能障碍与较轻的疾病表现和较好的预后有关。
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引用次数: 0
Does delocalised PCR for Streptococcus B in the labour ward allow adequate administration of antibiotics to prevent early neonatal infection? 产房对B型链球菌的局部PCR检测是否允许适当的抗生素管理以预防新生儿早期感染?
IF 3 4区 医学 Q2 INFECTIOUS DISEASES Pub Date : 2025-05-24 DOI: 10.1016/j.bjid.2025.104553
Clémentine Guetat , Laetitia Roussel , Marie De Antonio , Marie Accoceberry , Céline Houlle , Fanny Petillon , Marion Rouzaire , Denis Gallot

Introduction

Streptococcus B is a commensal infectious agent of the intestinal and genitourinary tract. It is often implicated in early neonatal infections. Some 10 %–30 % of women are colonised by this bacterium. Screening for carriage in women before delivery prior to antibiotic prophylaxis is thus essential. In recent years, real-time PCR tests have been developed. Our main objective was to determine whether screening for Streptococcus B carriage by PCR on admission (gold standard GeneXpert) permits complete antibiotic prophylaxis.

Materials and methods

This was an observational, retrospective study. Data set from all patients with a delocalised PCR for Streptococcus B (GeneXpert Instrument System) on arrival at the maternity hospital were collected between January 2022 and February 2023. We recorded 3467 test results, of which 344 were positive for Streptococcus B carriage. A total of 236 positive patients were included in the analysis. Antibioprophylaxis was considered complete when the patient had received at least one dose more than 4-hours before birth.

Results

Of the 236 patients, antibiotic therapy was incomplete in 53 cases (22.4 %) because vaginal delivery or caesarean section occurred less than 4-hours after the first dose. Antibioprophylaxis was not initiated in 33 cases. The main reason was for rapid labour in 28 cases (11.9 %). The 5 remaining cases did not receive antibiotics because probable omission by the team (2.1 %).

Conclusion

Delocalised PCR allows complete antibiotic prophylaxis against Streptococcus B in 63.6 % of cases, offering scope for improvement. While it will not be possible to improve antibioprophylaxis in case of rapid labour (within 3 hours after arrival), we should be able to prevent omissions (2.1 %) and, above all, reduce the birth rate before the second dose (22.4 %) by administering the first dose more quickly.
B型链球菌是肠道和泌尿生殖道的一种共感染性病原体。它通常与早期新生儿感染有关。大约10% - 30%的女性被这种细菌所感染。因此,在进行抗生素预防之前对妇女进行产前携带筛查是必要的。近年来,实时PCR检测得到了发展。我们的主要目的是确定入院时用PCR(金标准GeneXpert)筛查B型链球菌携带者是否允许完全的抗生素预防。材料与方法本研究为观察性、回顾性研究。在2022年1月至2023年2月期间,收集了所有到达妇产医院时进行B型链球菌(GeneXpert仪器系统)局部PCR检测的患者的数据集。我们记录了3467个检测结果,其中344个为B型链球菌携带者阳性。共有236例阳性患者纳入分析。当患者在出生前4小时以上接受了至少一剂抗生素预防时,被认为是完全的。结果在236例患者中,53例(22.4%)的抗生素治疗不完全,因为阴道分娩或剖宫产发生在第一次给药后不到4小时。33例未开始抗生素预防。28例(11.9%)以产程过快为主要原因。其余5例未接受抗生素治疗,原因可能是团队疏忽(2.1%)。结论脱位PCR对B型链球菌完全预防的检出率为63.6%,有进一步提高的空间。虽然在快速分娩(分娩后3小时内)的情况下不可能改善抗生素预防,但我们应该能够防止遗漏(2.1%),最重要的是,通过更快地给第一剂药,降低第二剂前的出生率(22.4%)。
{"title":"Does delocalised PCR for Streptococcus B in the labour ward allow adequate administration of antibiotics to prevent early neonatal infection?","authors":"Clémentine Guetat ,&nbsp;Laetitia Roussel ,&nbsp;Marie De Antonio ,&nbsp;Marie Accoceberry ,&nbsp;Céline Houlle ,&nbsp;Fanny Petillon ,&nbsp;Marion Rouzaire ,&nbsp;Denis Gallot","doi":"10.1016/j.bjid.2025.104553","DOIUrl":"10.1016/j.bjid.2025.104553","url":null,"abstract":"<div><h3>Introduction</h3><div><em>Streptococcus</em> B is a commensal infectious agent of the intestinal and genitourinary tract. It is often implicated in early neonatal infections. Some 10 %–30 % of women are colonised by this bacterium. Screening for carriage in women before delivery prior to antibiotic prophylaxis is thus essential. In recent years, real-time PCR tests have been developed. Our main objective was to determine whether screening for <em>Streptococcus</em> B carriage by PCR on admission (gold standard GeneXpert) permits complete antibiotic prophylaxis.</div></div><div><h3>Materials and methods</h3><div>This was an observational, retrospective study. Data set from all patients with a delocalised PCR for <em>Streptococcus</em> B (GeneXpert Instrument System) on arrival at the maternity hospital were collected between January 2022 and February 2023. We recorded 3467 test results, of which 344 were positive for <em>Streptococcus</em> B carriage. A total of 236 positive patients were included in the analysis. Antibioprophylaxis was considered complete when the patient had received at least one dose more than 4-hours before birth.</div></div><div><h3>Results</h3><div>Of the 236 patients, antibiotic therapy was incomplete in 53 cases (22.4 %) because vaginal delivery or caesarean section occurred less than 4-hours after the first dose. Antibioprophylaxis was not initiated in 33 cases. The main reason was for rapid labour in 28 cases (11.9 %). The 5 remaining cases did not receive antibiotics because probable omission by the team (2.1 %).</div></div><div><h3>Conclusion</h3><div>Delocalised PCR allows complete antibiotic prophylaxis against <em>Streptococcus</em> B in 63.6 % of cases, offering scope for improvement. While it will not be possible to improve antibioprophylaxis in case of rapid labour (within 3 hours after arrival), we should be able to prevent omissions (2.1 %) and, above all, reduce the birth rate before the second dose (22.4 %) by administering the first dose more quickly.</div></div>","PeriodicalId":56327,"journal":{"name":"Brazilian Journal of Infectious Diseases","volume":"29 4","pages":"Article 104553"},"PeriodicalIF":3.0,"publicationDate":"2025-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144124551","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Acceptability and usability of oral fluid HCV self-testing among health-facility users from Brazil: a cross-sectional study of 685 participants 巴西卫生机构使用者口服液丙型肝炎自检的可接受性和可用性:一项685名参与者的横断面研究
IF 3 4区 医学 Q2 INFECTIOUS DISEASES Pub Date : 2025-05-23 DOI: 10.1016/j.bjid.2025.104544
Hugo Perazzo , Cristiane Villela-Nogueira , Maria K. Gomes , Andre Daher , Cristiane Siqueira-do-Valle , Ketiuce Zukeram , Ana Cristina G. Ferreira , Karen Cristine Tonini , Elton Carlos de Almeida , Sandra W. Cardoso , Beatriz Grinsztejn , Valdilea G. Veloso

Introduction and objectives

HCV Self-Testing (HCVST) can be used to uptake HCV testing. We aimed to evaluate the acceptability/usability and re-reading/re-testing agreement of oral fluid HCVST among health-facility users in the Primary Care Systemin Brazil.

Materials and methods

Consecutive people aged 18‒79 years using the Primary Care System (PCS) from 04-July-2022 to 30-September-2022 were invited for this cross-sectional study. The professional use OraQuick® HCV Rapid Antibody Test was used as a HCVST prototype. Oral fluid HCVST was performed relying on a step-by-step video and written/pictorial instructions. Usability was assessed by observed errors and documented need of assistance by a Healthcare Worker (HCW). After HCVST, a second HCV test was performed by the HCW using the same test-kit. Re-reading and re-testing concordances were evaluated (Cohen’s kappa, κ). Post-testing participant’s perspectives were assessed.

Results

685 participants (74.5% female; median age = 52 [IQR 39‒61] years, 52.5% with schooling ≤ 10 years) were included. Major observed errors [%(95%CI)] were incorrect sample collection [32.8% (29.4‒36.5)] and wrong placing the test device in the tube [15.0% (12.6‒17.9)]. A total of 35.6% (95% CI 32.1‒39.3) of participants needed assistance in at least one step of HCVST. Re-reading and re-testing agreements were 95.2% (κ = 0.56) and 99.7% (κ = 0.67; n = 626 excluding invalid tests), respectively. After HCVST, 93% felt safe, 99% would be willing to test again, and 99% would recommend HCVST. Most participants rated the HCVST experience as easy (73%) or very easy (24%).

Conclusion

Oral-fluid HCVST was feasible and well-accepted among users of the PCS in Brazil. HCVST can be an alternative to scale-up HCV testing.
HCV自检(HCV Self-Testing, HCVST)可用于HCV检测。我们的目的是评估巴西初级保健系统卫生机构用户口服液HCVST的可接受性/可用性和重新阅读/重新测试协议。材料和方法:本横断面研究邀请了2022年7月4日至2022年9月30日期间使用初级保健系统(PCS)的18-79岁连续人群。专业使用的OraQuick®HCV快速抗体测试被用作HCVST原型。根据循序渐进的视频和书面/图片说明进行口腔液HCVST。可用性通过观察到的错误和记录的医疗工作者(HCW)的帮助需求来评估。HCVST后,由HCW使用相同的检测试剂盒进行第二次HCV检测。评估复读和复测的一致性(Cohen’s kappa, κ)。评估测试后参与者的观点。结果685名参与者中,女性占74.5%;年龄中位数为52岁[IQR 39-61]岁,其中52.5%受教育年限≤10年)。观察到的主要错误[%(95%CI)]是不正确的样品采集[32.8%(29.4-36.5)]和错误地将测试装置放置在试管中[15.0%(12.6-17.9)]。总共有35.6% (95% CI 32.1-39.3)的参与者在HCVST的至少一个步骤中需要帮助。复读和复测协议分别为95.2% (κ = 0.56)和99.7% (κ = 0.67;N = 626,排除无效试验)。在HCVST后,93%的人感到安全,99%的人愿意再次进行测试,99%的人会推荐HCVST。大多数参与者认为HCVST体验简单(73%)或非常简单(24%)。结论口服液HCVST在巴西的PCS用户中是可行的,并且被广泛接受。HCVST可作为扩大HCV测试的替代方案。
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引用次数: 0
Coexistence of PMQR and ESBL genes among clinical Escherichia coli isolates from community-acquired UTI in Mexicali, on the US-Mexico border 美墨边境墨西卡利社区获得性尿路感染临床分离株PMQR和ESBL基因共存
IF 3 4区 医学 Q2 INFECTIOUS DISEASES Pub Date : 2025-05-23 DOI: 10.1016/j.bjid.2025.104554
Dolores A. Marquez-Salazar , Ricardo Delgadillo-Valles , Gerson N. Hernandez-Acevedo , Edwin Barrios-Villa , Raquel Muñiz-Salazar , Gilberto Lopez-Valencia , Paulina Haro , Enrique Trasviña-Muñoz , Rafael Martinez-Miranda , Jonathan Arauz-Cabrera
Escherichia coli is an opportunistic pathogen and a leading cause of Community-Acquired Urinary Tract Infections (CA-UTIs). E. coli can harbor multiple genetic resistant determinants, such as Extended Spectrum Beta-lactamases (ESBL) and Plasmid-Mediated Quinolone Resistance (PMQR) genes, complicating the empirical treatment of UTIs with β-lactams and quinolones. The aim of his study was to characterize ESBL and PMQR genes among E. coli isolates from CA-UTI in Mexicali, Mexico Isolates were collected from January to December 2023. Identification was performed by MALDI-TOF, and ESBL-producing determination and antimicrobial susceptibility by Vitek 2. Detection of ESBL and PMQR, and phylotyping were performed by PCR. Genetic diversity was determined by Enterobacterial Repetitive Intergenic Consensus Polymerase Chain Reaction (ERIC-PCR). Eighty-nine E. coli isolates were collected from CA-UTIs. All exhibited resistance to ciprofloxacin, ceftriaxone, and cefotaxime, while being susceptible to carbapenems and ceftazidime/avibactam. All isolates tested positive for an ESBL gene, with blaCTX−M (98.9 %) being the most prevalent. Five isolates tested negative for PMQR genes; the remaining showed aac(6′)-lb-cr present in 85.3 %. Coexistence between ESBL and PMQR genes was noted in 95.5 %. Most prevalent plylogenetic group was group B2 (74.2 %). This study provides valuable regional data, highlighting a public health problem due to the high prevalence of ESBL and PMQR genes in E. coli responsible for CA-UTI, which are linked to multidrug resistance. Genetic diversity was found, suggesting multiple sources of resistant strains in the community. These findings underline the need for surveillance and control to limit the spread of resistant E. coli, locally and globally.

Data summary

The authors confirm all supporting data, code, and protocols have been provided within the article or through supplementary data files.
大肠杆菌是一种机会致病菌,也是社区获得性尿路感染(ca - uti)的主要原因。大肠杆菌可携带多种遗传耐药决定因素,如广谱β-内酰胺酶(ESBL)和质粒介导的喹诺酮耐药(PMQR)基因,使β-内酰胺类和喹诺酮类药物治疗uti的经验复杂化。本研究的目的是对墨西哥墨西卡利CA-UTI大肠杆菌分离株的ESBL和PMQR基因进行特征分析。用MALDI-TOF法鉴定菌株,用Vitek 2法测定菌株产esbl和药敏。采用PCR检测ESBL和PMQR,并进行系统分型。遗传多样性采用肠杆菌重复基因间一致聚合酶链反应(ERIC-PCR)测定。从ca - uti中分离出89株大肠杆菌。所有患者均对环丙沙星、头孢曲松和头孢噻肟耐药,而对碳青霉烯类和头孢他啶/阿维巴坦敏感。所有分离株均检测出ESBL基因阳性,其中以blaCTX−M(98.9%)最为普遍。5株PMQR基因检测呈阴性;剩下的85.3%显示aac(6′)-lb-cr。95.5%的人发现ESBL和PMQR基因共存。多倍体发育组以B2组居多(74.2%)。该研究提供了有价值的区域数据,强调了由于导致CA-UTI的大肠杆菌中ESBL和PMQR基因的高流行率导致的公共卫生问题,这些基因与多药耐药性有关。发现了遗传多样性,表明群落中存在多种耐药菌株来源。这些发现强调需要进行监测和控制,以限制耐药大肠杆菌在当地和全球的传播。数据摘要作者确认在文章中或通过补充数据文件提供了所有支持数据、代码和协议。
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引用次数: 0
Ventilator-associated events criteria in the assessment of Ventilator-Associated Pneumonia (IMPACTO MR-PAV): A prospective cohort 评估呼吸机相关肺炎的呼吸机相关事件标准(IMPACTO MR-PAV):一项前瞻性队列研究
IF 3 4区 医学 Q2 INFECTIOUS DISEASES Pub Date : 2025-05-22 DOI: 10.1016/j.bjid.2025.104543
Giovanna Marssola Nascimento , Daniela Laranja Gomes Rodrigues , Filipe Teixeira Piastrelli , Maysa Yukari Cheno , Katia Cristina Camondá Braz , Lucas Bassolli de Oliveira Alves , Bruno Martins Tomazini , Viviane Cordeiro Veiga , Beatriz Arns , Bruno Adler Maccagnan Pinheiro Besen , Antonio Paulo Nassar Junior , Alvaro Avezum , Renata Karoline Lima da Silva , Conceição de Maria Pedrozo e Silva de Azevedo , Maria Luiza Santana de Oliveira Silva , Graziela Regina Kist , Fernanda Borges Salgado , Maria Tereza Farias de Moura , Emerson Boschi , Pedro Martins Pereira Kurtz , Haliton Alves de Oliveira Junior

Background

Ventilator-Associated Pneumonia (VAP) is a critical healthcare-associated infection, but no universal surveillance standard exists. In 2013, the CDC revised its criteria, incorporating Ventilator-Associated Events (VAEs) with VAPs as a subset. In Brazil, however, the Health Regulatory Agency (ANVISA) chose to retain the traditional VAP criteria. This study aimed to evaluate the incidence of VAP using both the traditional and revised criteria.

Method

We conducted a prospective multicentric cohort of critically ill adult patients who required mechanical ventilation in 12 Brazilian Intensive Care Units (ICU) over six months. We evaluated the level of agreement between the two criteria considering frequency and kappa coefficient. This study was registered at ClinicalTrials.gov, NCT05589727.

Results

The study included 987 patients and revealed that 85.7 % of VAP reported by the centers according to ANVISA criteria were not confirmed by the adjudicators. Among the adjudicators, a 16.7 % disagreement (kappa = 0.32) suggested subjectivity in applying VAP criteria. Between the two sets of criteria, an 11% disagreement (kappa = 0.12) was observed. However, manual adjudication of automatically generated VAEs showed only a 4 % disagreement, indicating greater objectivity in the VAE criteria. Despite the high agreement in VAE adjudication, this did not necessarily translate to a more reliable exclusion of non-events, which is essential for accurate surveillance.

Conclusion

The findings highlight the challenges in identifying and classifying VAP, emphasizing the need for improved surveillance methods. The results could inform enhancements in VAP monitoring in Brazil and potentially impact other countries using similar criteria.
背景:呼吸机相关性肺炎(VAP)是一种严重的卫生保健相关感染,但目前尚无统一的监测标准。2013年,CDC修订了其标准,将呼吸机相关事件(VAEs)和VAPs作为一个子集。然而,在巴西,卫生监管机构(ANVISA)选择保留传统的VAP标准。本研究旨在用传统和修订后的标准评估VAP的发生率。方法:我们对巴西12个重症监护病房(ICU) 6个月以上需要机械通气的危重成人患者进行了前瞻性多中心队列研究。我们评估了考虑频率和kappa系数的两个标准之间的一致程度。本研究已在ClinicalTrials.gov注册,编号NCT05589727。结果本研究纳入987例患者,各中心根据ANVISA标准报告的VAP有85.7%未得到评审人员的确认。在审稿人中,16.7%的分歧(kappa = 0.32)表明在应用VAP标准时存在主观性。在两组标准之间,观察到11%的分歧(kappa = 0.12)。然而,对自动生成的VAE的人工裁决只显示出4%的不一致,这表明在VAE标准中更大的客观性。尽管在VAE裁决中有很高的一致性,但这并不一定转化为更可靠的非事件排除,而非事件排除对于准确的监视是必不可少的。结论研究结果突出了VAP识别和分类的挑战,强调了改进监测方法的必要性。结果可以为巴西加强VAP监测提供信息,并可能影响使用类似标准的其他国家。
{"title":"Ventilator-associated events criteria in the assessment of Ventilator-Associated Pneumonia (IMPACTO MR-PAV): A prospective cohort","authors":"Giovanna Marssola Nascimento ,&nbsp;Daniela Laranja Gomes Rodrigues ,&nbsp;Filipe Teixeira Piastrelli ,&nbsp;Maysa Yukari Cheno ,&nbsp;Katia Cristina Camondá Braz ,&nbsp;Lucas Bassolli de Oliveira Alves ,&nbsp;Bruno Martins Tomazini ,&nbsp;Viviane Cordeiro Veiga ,&nbsp;Beatriz Arns ,&nbsp;Bruno Adler Maccagnan Pinheiro Besen ,&nbsp;Antonio Paulo Nassar Junior ,&nbsp;Alvaro Avezum ,&nbsp;Renata Karoline Lima da Silva ,&nbsp;Conceição de Maria Pedrozo e Silva de Azevedo ,&nbsp;Maria Luiza Santana de Oliveira Silva ,&nbsp;Graziela Regina Kist ,&nbsp;Fernanda Borges Salgado ,&nbsp;Maria Tereza Farias de Moura ,&nbsp;Emerson Boschi ,&nbsp;Pedro Martins Pereira Kurtz ,&nbsp;Haliton Alves de Oliveira Junior","doi":"10.1016/j.bjid.2025.104543","DOIUrl":"10.1016/j.bjid.2025.104543","url":null,"abstract":"<div><h3>Background</h3><div>Ventilator-Associated Pneumonia (VAP) is a critical healthcare-associated infection, but no universal surveillance standard exists. In 2013, the CDC revised its criteria, incorporating Ventilator-Associated Events (VAEs) with VAPs as a subset. In Brazil, however, the Health Regulatory Agency (ANVISA) chose to retain the traditional VAP criteria. This study aimed to evaluate the incidence of VAP using both the traditional and revised criteria.</div></div><div><h3>Method</h3><div>We conducted a prospective multicentric cohort of critically ill adult patients who required mechanical ventilation in 12 Brazilian Intensive Care Units (ICU) over six months. We evaluated the level of agreement between the two criteria considering frequency and kappa coefficient. This study was registered at ClinicalTrials.gov, NCT05589727.</div></div><div><h3>Results</h3><div>The study included 987 patients and revealed that 85.7 % of VAP reported by the centers according to ANVISA criteria were not confirmed by the adjudicators. Among the adjudicators, a 16.7 % disagreement (kappa = 0.32) suggested subjectivity in applying VAP criteria. Between the two sets of criteria, an 11% disagreement (kappa = 0.12) was observed. However, manual adjudication of automatically generated VAEs showed only a 4 % disagreement, indicating greater objectivity in the VAE criteria. Despite the high agreement in VAE adjudication, this did not necessarily translate to a more reliable exclusion of non-events, which is essential for accurate surveillance.</div></div><div><h3>Conclusion</h3><div>The findings highlight the challenges in identifying and classifying VAP, emphasizing the need for improved surveillance methods. The results could inform enhancements in VAP monitoring in Brazil and potentially impact other countries using similar criteria.</div></div>","PeriodicalId":56327,"journal":{"name":"Brazilian Journal of Infectious Diseases","volume":"29 4","pages":"Article 104543"},"PeriodicalIF":3.0,"publicationDate":"2025-05-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144107560","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Enteral versus intravenous antibiotics for critically ill patients: A pilot study 危重病人肠内与静脉注射抗生素:一项初步研究
IF 3 4区 医学 Q2 INFECTIOUS DISEASES Pub Date : 2025-05-14 DOI: 10.1016/j.bjid.2025.104538
Dayana dos Santos Oliveira , Julia Vitória da Rocha , Juliano Gasparetto , Carolina Hikari Yamada , Joao Paulo Telles , Felipe Francisco Tuon

Background

While there are valid concerns regarding the use of Enteral Antibiotics (EN) in the Intensive Care Unit (ICU), the evidence opposing this practice has not been thoroughly evaluated in prior research.

Aim

This study aimed to evaluate the transition from sequential Intravenous (IV) antibiotics to EN antibiotics in critically ill patients with infections.

Methods

This was a prospective, multicenter, randomized, unblinded clinical trial involving patients with infections who received antibiotic therapy. The study compared sequential IV antibiotic treatment to EN therapy in patients who continued standard IV therapy in the intensive care unit. Primary outcome measures included mortality and clinical improvement assessed on days 3, 5, and 10. Secondary outcomes encompassed hospital and ICU length of stay, costs, and evaluation of microbiological failure.

Results

A total of67 patients were included in the EN group and 60 patients in the IV group. Most patients were classified as infected (66.1 %), with 33.1 % diagnosed with sepsis. In-hospital mortality rates were comparable between the two groups, with 31 % in the EN group and 30 % in the IV group. Clinical outcomes assessed on days 3, 5, and 10 showed no significant differences between the groups. Among the 67 patients in the EN group, 7 (10.5 %) required a return to intravenous antibiotic therapy. Notably, drug costs in the IV group increased by 207 %.

Conclusion

This is the first controlled and randomized study to evaluate the oral/enteral route of antibiotic administration in the ICU. The findings indicate no significant differences in clinical outcomes or survival rates between the two groups, while demonstrating reduced costs and comparable safety with EN antibiotics.
背景:虽然对在重症监护病房(ICU)使用肠内抗生素(EN)存在合理的担忧,但反对这种做法的证据尚未在先前的研究中得到彻底评估。目的探讨重症感染患者从序贯静脉(IV)抗生素向EN抗生素的过渡。方法:这是一项前瞻性、多中心、随机、非盲临床试验,涉及接受抗生素治疗的感染患者。该研究比较了在重症监护病房继续标准静脉治疗的患者的序贯静脉抗生素治疗和EN治疗。主要结局指标包括在第3、5和10天评估的死亡率和临床改善。次要结局包括住院和ICU住院时间、费用和微生物失败的评估。结果EN组67例,IV组60例。大多数患者为感染(66.1%),其中33.1%诊断为败血症。两组的住院死亡率相当,EN组为31%,静脉注射组为30%。在第3、5和10天评估的临床结果显示,两组之间没有显著差异。在EN组的67例患者中,7例(10.5%)需要恢复静脉抗生素治疗。值得注意的是,静脉注射组的药物费用增加了207%。结论本研究是首个评估ICU患者口服/肠内给药方式的随机对照研究。研究结果表明,两组之间的临床结果或生存率无显著差异,同时显示EN抗生素的成本降低,安全性相当。
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引用次数: 0
RIMOXCLAMIN: New therapeutic regimen for Hansen’s Disease cure based on effective sensitivity recovery 利莫霉素:基于有效敏感性恢复治疗汉森氏病的新治疗方案
IF 3 4区 医学 Q2 INFECTIOUS DISEASES Pub Date : 2025-05-14 DOI: 10.1016/j.bjid.2025.104539
Marco Andrey Cipriani Frade , Gustavo Sartori Albertino , Filipe Rocha Lima , Natália Aparecida de Paula , Fabiana Aparecida Correa Cinto , Fernanda Cruz Perecin , Andrezza Westin , Wilson Marques Junior , Helena Barbosa Lugão

Background

World Health Organization (WHO) has recommended Multidrug Therapy (MDT/WHO) for Hansen’s Disease (HD) since 1982; nevertheless, relapse, antimicrobial resistance, and adverse reactions indicate the need for new therapeutic regimens. We evaluated the efficacy and safety of the new anti-HD regimen RIMOXCLAMIN (Rifampicin, Moxifloxacin, Clarithromycin, and Minocycline) compared with standard Multidrug Therapy provided by WHO (MDT/WHO).

Methodology/principal findings

66 multibacillary HD new cases (46: RIMOXCLAMIN / 20: MDT/WHO) were evaluated between 2015 and 2023. Patients were followed up at least bimonthly by hansenologists for neurological and cutaneous findings and side effects of treatments. Hands/feet tactile sensitivity tests by Semmes Weinstein Monofilaments (SWM) and Physical Disability Grade (PDG) were carried out on the diagnosis, 3rd, 6th, and 12th months. 84.8 % and 80 % of the patients were classified as Borderline-Borderline (BB) in RIMOXCLAMIN and MDT/WHO groups, respectively, with no significant difference between them (p = 0.12). Nerve thickening was reduced by palpation in both groups: in RIMOXCLAMIN, reduction occurred early (65 % to 28 % at 6-months, p = 0.03; 9 % at 12-months, p = 0.03), while in MDT/WHO, it was later (95 % to 40 % at 12-months, p = 0.002). The greatest difference was at 6 months (p < 0.0001). A significant reduction was observed in pain scales on the 3rd month of treatment only with RIMOXCLAMIN; in the end, both groups showed significant reductions in pain scales, being greater in RIMOXCLAMIN group. 0.5 % reduction in the number of abnormal SWM points on the hands compared to baseline, while in the MDT/WHO group, there was an increase of abnormal points of 5.4 %. On the feet, RIMOXCLAMIN showed a reduction of 17.9 %, while in the MDT/WHO, it was 10.3 %. During follow-up, the RIMOXCLAMIN showed a significant decrease in the sum of altered SWM points compared to MDT/WHO (p < 0.05). Only RIMOXCLAMIN improved PDG monitoring. Both groups reported mild adverse effects.

Conclusions/significance

The results indicate that RIMOXCLAMIN was superior to MDT/WHO in terms of quick recovery of neurological damage, evidenced by the improvement of symptoms and sensitivity in hands and feet as early as the third month, with a progressive improvement, maintained after the end of treatment, including a reduce of patients with PDG.
自1982年以来,世界卫生组织(WHO)推荐多药治疗(MDT/WHO)治疗汉森病(HD);然而,复发、抗菌素耐药性和不良反应表明需要新的治疗方案。我们评估了新的抗hd方案RIMOXCLAMIN(利福平、莫西沙星、克拉霉素和米诺环素)与世界卫生组织提供的标准多药治疗(MDT/WHO)的疗效和安全性。方法/主要发现对2015年至2023年间66例多菌性HD新病例(46例:RIMOXCLAMIN / 20例:MDT/WHO)进行了评估。患者至少每两个月由神经科医生随访一次,以了解神经和皮肤的发现以及治疗的副作用。在诊断、第3、6、12个月进行Semmes Weinstein单丝(SWM)手/脚触觉灵敏度测试和肢体残疾分级(PDG)。RIMOXCLAMIN组和MDT/WHO组分别有84.8%和80%的患者被划分为边缘性-边缘性(BB),两组间差异无统计学意义(p = 0.12)。两组患者触诊后神经增厚均有所减轻:利莫昔霉素组患者的神经增厚较早出现(6个月时65% ~ 28%,p = 0.03;12个月时为9%,p = 0.03),而在MDT/WHO中较晚(12个月时为95%至40%,p = 0.002)。6个月时差异最大(p <;0.0001)。仅用利莫昔霉素治疗第3个月,疼痛量表明显减轻;最后,两组疼痛程度均有明显减轻,利莫霉素组疼痛程度更大。与基线相比,手上的异常SWM点数减少0.5%,而在MDT/WHO组中,异常点数增加了5.4%。在脚上,RIMOXCLAMIN显示减少17.9%,而在MDT/WHO中,这是10.3%。在随访期间,与MDT/WHO相比,RIMOXCLAMIN显示SWM改变点的总和显著减少(p <;0.05)。只有利莫霉素改善了PDG监测。两组都报告了轻微的不良反应。结论/意义:结果表明,RIMOXCLAMIN在神经损伤的快速恢复方面优于MDT/WHO,早在第3个月就能改善手足症状和敏感性,并在治疗结束后持续改善,包括PDG患者的减少。
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引用次数: 0
期刊
Brazilian Journal of Infectious Diseases
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