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Dynamical behavior of a classical stochastic delayed chemostat model 经典随机延迟恒温模型的动力学行为
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-06-14 DOI: 10.1007/s10910-024-01632-6
Xiaofeng Zhang, Shulin Sun

In this paper, we formulate a classical stochastic delayed chemostat model and verify that this model has a unique global positive solution. Furthermore, we investigate the dynamical behavior of this solution. We find that the solution of stochastic delayed system will oscillate around the equilibriums of the corresponding deterministic delayed model, moreover, analytical findings reveal that time delay has very significant effects on the extinction and persistence of the microorganism, that is to say, when the time delay is smaller, microorganism will be persistent; when the time delay is larger, microorganism will be extinct. Finally, computer simulations are carried out to illustrate the obtained results. In addition, we can also find by the computer simulation that larger noise may lead to microorganism become extinct, although microorganism is persistent in the deterministic delayed system when the time delay is smaller.

本文提出了一个经典的随机延迟恒温模型,并验证了该模型具有唯一的全局正解。此外,我们还研究了这个解的动力学行为。我们发现,随机延迟系统的解会围绕相应的确定性延迟模型的均衡点振荡,而且分析结果表明,时间延迟对微生物的灭绝和持久性有非常显著的影响,即时间延迟越小,微生物越持久;时间延迟越大,微生物越灭绝。最后,我们通过计算机模拟来说明所得到的结果。此外,通过计算机模拟我们还可以发现,当时间延迟较小时,虽然微生物在确定性延迟系统中会持续存在,但较大的噪声可能会导致微生物灭绝。
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引用次数: 0
Analysis of an almost second-order parameter-robust numerical technique for a weakly coupled system of singularly perturbed convection-diffusion equations 奇异扰动对流扩散方程弱耦合系统的近二阶参数稳健数值技术分析
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-06-12 DOI: 10.1007/s10910-024-01634-4
S. Chandra Sekhara Rao, Varsha Srivastava

We present a parameter-robust finite difference method for solving a system of weakly coupled singularly perturbed convection-diffusion equations. The diffusion coefficient of each equation is a small distinct positive parameter. Due to this, the solution to the system has, in general, overlapping boundary layers. The problem is discretized using a particular combination of a compact second-order difference scheme and a central difference scheme on a piecewise-uniform Shishkin mesh. The convergence analysis is given, and the method is shown to have almost second-order uniform convergence in the maximum norm with respect to the perturbation parameters. The results of numerical experiments are in agreement with the theoretical outcomes.

我们提出了一种参数可靠的有限差分法,用于求解弱耦合奇异扰动对流扩散方程系统。每个方程的扩散系数都是一个很小的独立正参数。因此,该系统的解一般会有重叠的边界层。在片状均匀 Shishkin 网格上,采用紧凑二阶差分方案和中心差分方案的特殊组合对问题进行离散化处理。给出了收敛性分析,结果表明该方法在最大规范上几乎具有与扰动参数相关的二阶均匀收敛性。数值实验结果与理论结果一致。
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引用次数: 0
An effective multistep fourteenth-order phase-fitting approach to solving chemistry problems 解决化学问题的有效多步十四阶相位拟合方法
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-06-12 DOI: 10.1007/s10910-024-01628-2
Hui Huang, Cheng Liu, Chia-Liang Lin, T. E. Simos

Applying a phase-fitting method might potentially vanish the phase-lag and its first derivative. Improving algebraic order (AOR) and decreasing function evaluations (FEvs) are the goals of the new strategy called the cost-efficient approach. Equation PF2DPHFITN142SPS demonstrates the unique method. The suggested approach is P-Stable, meaning it is indefinitely periodic. The proposed method is applicable to a wide variety of periodic and/or oscillatory issues. The challenging problem of Schrödinger-type coupled differential equations was solved in quantum chemistry by using this novel approach. Since the new method only needs 5FEvs to run each stage, it may be considered a cost-efficient approach. With an AOR of 14, we can significantly improve our present predicament.

采用相位拟合方法可能会使相位滞后及其一阶导数消失。改进代数阶次(AOR)和减少函数求值(FEvs)是被称为成本效益方法的新策略的目标。公式 PF2DPHFITN142SPS 演示了这种独特的方法。建议的方法是 P-稳定的,即它是无限周期的。建议的方法适用于各种周期和/或振荡问题。利用这种新方法解决了量子化学中具有挑战性的薛定谔型耦合微分方程问题。由于新方法运行每个阶段只需要 5FEvs ,因此可以说是一种经济高效的方法。由于 AOR 为 14,我们可以大大改善目前的困境。
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引用次数: 0
Efficient computational method for singularly perturbed Burger-Huxley equations 奇异扰动布尔格-赫胥黎方程的高效计算方法
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-06-10 DOI: 10.1007/s10910-024-01627-3
Masho Jima Kabeto, Tesfaye Aga Bullo, Habtamu Garoma Debela, Gemadi Roba Kusi, Sisay Dibaba Robi

This paper focuses on an efficient computational method for solving the singularly perturbed Burger-Huxley equations. The difficulties encountered in solving this problem come from the nonlinearity term. The quasilinearization technique linearizes the nonlinear term in the differential equation. The finite difference approximation is formulated to approximate the derivatives in the differential equations and then accelerate its rate of convergence to improve the accuracy of the solution. The stability and consistency analysis were investigated to guarantee the convergence analysis of the formulated method. Numerical examples are considered for numerical illustrations. Numerical experiments were conducted to sustain the theoretical results and to show that the proposed method produces a more correct solution than some surviving methods in the literature.

本文重点研究解决奇异扰动伯格-赫胥黎方程的高效计算方法。解决这一问题所遇到的困难来自非线性项。准线性化技术将微分方程中的非线性项线性化。采用有限差分近似方法对微分方程中的导数进行近似,然后加快其收敛速度,以提高求解的精度。研究了稳定性和一致性分析,以保证所制定方法的收敛性分析。考虑了数值示例。进行了数值实验,以证实理论结果,并表明与文献中的一些现存方法相比,所提出的方法能产生更正确的解。
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引用次数: 0
An efficient numerical algorithm for solving linear systems with cyclic tridiagonal coefficient matrices 解循环三对角系数矩阵线性系统的高效数值算法
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-06-08 DOI: 10.1007/s10910-024-01631-7
Ji-Teng Jia, Fu-Rong Wang, Rong Xie, Yi-Fan Wang

In the present paper, we mainly consider the direct solution of cyclic tridiagonal linear systems. By using the specific low-rank and Toeplitz-like structure, we derive a structure-preserving factorization of the coefficient matrix. Based on the combination of such matrix factorization and Sherman–Morrison–Woodbury formula, we then propose a cost-efficient algorithm for numerically solving cyclic tridiagonal linear systems, which requires less memory storage and data transmission. Furthermore, we show that the structure-preserving matrix factorization can provide us with an explicit formula for n-th order cyclic tridiagonal determinants. Numerical examples are given to demonstrate the performance and efficiency of our algorithm. All of the experiments are performed on a computer with the aid of programs written in MATLAB.

本文主要考虑循环三对角线性系统的直接求解。利用特定的低阶和类 Toeplitz 结构,我们推导出了系数矩阵的结构保留因式分解。基于这种矩阵因式分解与 Sherman-Morrison-Woodbury 公式的结合,我们提出了一种低成本高效率的算法,用于数值求解循环三对角线线性系统,该算法对内存存储和数据传输的要求较低。此外,我们还证明了结构保留矩阵因式分解可以为我们提供 n 阶循环三对角行列式的明确公式。我们给出了数值示例来证明我们算法的性能和效率。所有实验都是在计算机上借助用 MATLAB 编写的程序进行的。
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引用次数: 0
The use of a multistep, cost-efficient fourteenth-order phase-fitting method to chemistry problems 在化学问题中使用多步骤、经济高效的十四阶相位拟合方法
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-06-07 DOI: 10.1007/s10910-024-01623-7
Rong Xu, Bin Sun, Chia-Liang Lin, T. E. Simos

Applying a phase-fitting method might potentially vanish the phase-lag and its first derivative. Improving algebraic order (AOR) and decreasing function evaluations (FEvs) are the goals of the new strategy called the cost-efficient approach. Equation PF1DPHFITN142SPS demonstrates the unique method. The suggested approach is P-Stable, meaning it is indefinitely periodic. The proposed method is applicable to a wide variety of periodic and/or oscillatory issues. The challenging problem of Schrödinger-type coupled differential equations was solved in quantum chemistry by using this novel approach. Since the new method only needs 5FEvs to run each stage, it may be considered a cost-efficient approach. With an AOR of 14, we can significantly improve our present predicament.

采用相位拟合方法可能会使相位滞后及其一阶导数消失。改进代数阶次(AOR)和减少函数求值(FEvs)是被称为成本效益方法的新策略的目标。公式 PF1DPHFITN142SPS 演示了这种独特的方法。建议的方法是 P-稳定的,即它是无限周期的。建议的方法适用于各种周期和/或振荡问题。利用这种新方法解决了量子化学中具有挑战性的薛定谔型耦合微分方程问题。由于新方法运行每个阶段只需要 5FEvs ,因此可以说是一种经济高效的方法。由于 AOR 为 14,我们可以大大改善目前的困境。
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引用次数: 0
Chemical dynamics in a radioactive platinum -cerium oxide-water mixture within a vibrating Riga channel subject to sudden pressure gradient onset 放射性铂-氧化铈-水混合物在振动里加通道中的化学动力学,受突然压力梯度的影响
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-06-05 DOI: 10.1007/s10910-024-01625-5
Sanatan Das, Poly Karmakar, Tilak Kumar Pal, Soumitra Sarkar, Asgar Ali, Rabindra Nath Jana

In the realm of renewable energy, platinum (Pt) nanoparticles are crucial components in fuel cells. They particularly excel in hydrogen fuel cells, where their role as catalysts significantly boosts the efficiency of electrochemical reactions. Cerium oxide nanoparticles are highly prized in engineering and industry for their exceptional catalytic abilities. They are particularly notable for their role in reducing vehicle emissions and facilitating the oxidation of carbon monoxide and hydrocarbons. Their oxygen storage capacity, crucial in regulating oxygen levels during catalytic reactions, is vital in automotive exhaust systems. Such an appealing area has led us to explore the dynamic behaviours of a specialized hybrid nanofluid- a mixture of radioactive platinum, cerium oxide, and water within a vertically extended vibrating Riga channel. This model is set under the cumulative consequences of sudden pressure gradient onset, electromagnetic forces, electromagnetic radiation, and chemical reactions. This physical model consists of a static right wall and a left wall that undergoes transverse vibrations. This flow scenario is mathematically described using time-dependent partial differential equations. A closed-form solution for the flow-regulating equations is obtained by harnessing the Laplace transform (LT) method. The study meticulously details the ascendancy of various critical parameters on the functions and quantities of the model, particularly for hybrid nanofluid (HNF) and nanofluid (NF), using graphical and tabular representations. Our findings manifest an expansion in the modified Hartmann number notably boosts the fluid velocity across the Riga channel. The fluid temperature in HNF is consistently lower in HNF compared to NF. The species concentration levels in HNF and NF lower with rising Schmidt numbers and chemical reaction parameters. A widened width of magnets and electrodes results in lowered shear stresses at the Riga wall in both HNF and NF. Furthermore, the rate of heat transfer (RHT) at the vibrating wall for HNF consistently shows higher values than for NF. These novel insights have far-reaching implications in various industrial and engineering applications, including the development of catalytic converters, the optimization of hydrogen fuel cells, the efficient oxidation of carbon monoxide and hydrocarbons, and advancements in materials processing techniques.

在可再生能源领域,铂(Pt)纳米粒子是燃料电池的重要组成部分。它们在氢燃料电池中尤其出色,其催化剂作用大大提高了电化学反应的效率。氧化铈纳米粒子因其卓越的催化能力而在工程和工业领域备受推崇。它们在减少汽车尾气排放、促进一氧化碳和碳氢化合物氧化方面的作用尤为显著。它们的储氧能力对于在催化反应过程中调节氧气水平至关重要,在汽车排气系统中也至关重要。在这一极具吸引力的领域,我们探索了一种特殊混合纳米流体的动态行为--在垂直延伸的振动里加通道中,放射性铂、氧化铈和水的混合物。该模型是在压力梯度突然发生、电磁力、电磁辐射和化学反应的累积影响下建立的。该物理模型由静止的右壁和发生横向振动的左壁组成。这种流动情况使用随时间变化的偏微分方程进行数学描述。通过利用拉普拉斯变换(LT)方法,获得了流动调节方程的闭式解。研究采用图形和表格的形式,详细说明了各种关键参数对模型功能和数量的影响,特别是对混合纳米流体(HNF)和纳米流体(NF)的影响。我们的研究结果表明,修正哈特曼数的扩大显著提高了流体在里加通道中的流速。与 NF 相比,HNF 中的流体温度始终较低。HNF 和 NF 中的物种浓度水平随着施密特数和化学反应参数的增加而降低。在 HNF 和 NF 中,磁体和电极宽度的增加导致里加壁的剪应力降低。此外,HNF 振动壁的传热速率(RHT)值始终高于 NF。这些新见解对各种工业和工程应用具有深远影响,包括催化转换器的开发、氢燃料电池的优化、一氧化碳和碳氢化合物的高效氧化以及材料加工技术的进步。
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引用次数: 0
A comparative simulation study of piezoelectric properties in zigzag and armchair boron nitride nanotubes: by discovering a pioneering protocol 人字形和扶手形氮化硼纳米管压电特性的比较模拟研究:通过发现一种开创性协议
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-06-04 DOI: 10.1007/s10910-024-01635-3
Moein Adel, Peyman Keyhanvar, Masoumeh Zahmatkeshan, Zahed Tavangari, Neda Keyhanvar

Piezoelectric nanostructures have attracted significant attention owing to their capacity for converting mechanical energy into electrical energy, enabling applications in biomedical fields, actuators, and energy harvesting devices. Boron nitride nanotubes (BNNTs) exhibit unique properties that make them attractive candidates for piezoelectric applications. However, the influence of BNNT chiralities on their piezoelectric behavior has not been thoroughly explored. In this study, we investigated the piezoelectric effect of zigzag and armchair chiralities of BNNT structures, aiming to elucidate the relationship between chirality and piezoelectric response by discovering a novel protocol for simulating the electrical behavior of BNNTs at the nanoscale level. We employed a computational method to examine the piezoelectric potential of BNNT structures. First, we established an equivalent-sized three-dimensional (3D) model of zigzag and armchair BNNT structures using nanotube modeler software. The obtained models were then subjected to mesh analysis to generate finite element method simulations. The simulations were finally performed to analyze the electrical response of the BNNT structures under external mechanical forces. We observed that the electrical responses of zigzag BNNT were 1.6 times greater than armchair one. In conclusion, our study sheds light on the piezoelectric potential of zigzag and armchair chiralities of BNNT structures. Furthermore, our findings contribute to the understanding of the electrical properties of BNNTs and their potential for various medical and industrial applications. The knowledge gained from this study provides a foundation for further research and development in the field of piezoelectric nanostructures, paving the way for innovative advancements in nanotechnology.

压电纳米结构能够将机械能转化为电能,因此在生物医学领域、致动器和能量收集装置中的应用备受关注。氮化硼纳米管(BNNTs)表现出的独特性能使其成为压电应用的理想候选材料。然而,BNNT 手性对其压电行为的影响尚未得到深入探讨。在本研究中,我们研究了 BNNT 结构的之字形和扶手椅手性的压电效应,旨在通过发现一种在纳米级水平上模拟 BNNTs 电学行为的新方案,阐明手性与压电响应之间的关系。我们采用计算方法来研究 BNNT 结构的压电势。首先,我们使用纳米管建模软件建立了等尺寸的人字形和扶手形 BNNT 结构的三维 (3D) 模型。然后对获得的模型进行网格分析,生成有限元法模拟。模拟最后分析了 BNNT 结构在外部机械力作用下的电响应。我们观察到,人字形 BNNT 的电响应是扶手形的 1.6 倍。总之,我们的研究揭示了人字形和扶手椅手性 BNNT 结构的压电潜力。此外,我们的研究结果有助于了解 BNNT 的电学特性及其在各种医疗和工业应用中的潜力。本研究获得的知识为压电纳米结构领域的进一步研究和开发奠定了基础,为纳米技术的创新进步铺平了道路。
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引用次数: 0
Amplitude equation for a diffusion–reaction system in presence of complexing reaction with the activator species: the Brusselator model 存在与活化剂物种的复合反应的扩散反应系统的振幅方程:布鲁塞尔模型
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-05-30 DOI: 10.1007/s10910-024-01574-z
A. K. Dutt

For Brusselator diffusion–reaction model involving complex forming reaction with the activator species, an amplitude equation has been derived in the framework of a weakly nonlinear theory. Complexing reaction with the activator species strongly influences the time-dependent amplitudes such as in Hopf-wave bifurcations, whereas time-independent amplitudes such as in Turing—bifurcations, are independent of complexing reaction with the activator species. Complexing reaction arrests the arrival of Hopf—bifurcations and the domain of excitable non-oscillations such created may be used effectively for Turing-structure generation by inducing inhomogeneous perturbations of nonzero wavenumber mode. Any major complexing interaction with the activator species in a biological oscillatory network is bound to alter the domains of Hopf/Turing bifurcations affecting the course of physiological self-organization processes.

对于涉及与活化剂物种发生络合反应的布鲁塞尔扩散反应模型,我们在弱非线性理论框架内推导出了一个振幅方程。与活化剂物种的络合反应会强烈影响与时间相关的振幅,如霍普夫波分岔,而与时间无关的振幅,如图灵分岔,则与与活化剂物种的络合反应无关。络合反应会阻止霍普夫分岔的发生,所产生的可激发非振荡域可通过诱导非零波数模式的不均匀扰动,有效地用于图灵结构的生成。在生物振荡网络中,与激活剂物种之间的任何重大复合相互作用都必然会改变霍普夫/图灵分岔域,从而影响生理自组织过程的进程。
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引用次数: 0
A review on recent theoretical approaches made in the discovery of potential Covid-19 therapeutics 综述发现潜在 Covid-19 疗法的最新理论方法
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-05-28 DOI: 10.1007/s10910-024-01626-4
Apurba K Bhattacharjee

SARS CoV-2 virus (COVID-19) emerged as a highly infectious human pathogen in late 2019. Started in China but rapidly started spreading all over the world and soon became a pandemic. More than seven million deaths have been reported so far that devasted millions of families worldwide. Several drugs, such as hydroxychloroquine, chloroquine, remdesivir, favipiravir and arbidol have undergone some clinical studies since early 2020, but their safety concerns remained a serious issue. However, within an year from late 2019, several successful vaccines were invented to prevent people from the infection. Almost at the same time, two drugs were discovered. These are PAXLOVID™ (nirmatrelvir, ritonavir) from Pfizer and molnupiravir from Merck which were soon approved by the US-FDA, for emergency use in the treatment of COVID-19. But several challenges were soon reported in treatments with these drugs, particularly for those who are immunocompromised or have vaccine immunity and suffering for a long time from the infection (known as long-COVID). Complex issues for treatments of long-COVID patients continue to remain unresolved. Thus, discovery of new drugs to assist treatment for emerging COVID-19 problems is urgently needed. But it is important to note that discovery of new COVID-19 therapeutics, particularly small molecules is not a simple task. However, there are several excellent reviews on attempts for COVID-19 drug discovery including a handful of articles on theoretical approaches towards the goal. This review summarizes the theoretical attempts for discovery of COVID-19 drugs, their challenges and future opportunities along with efforts from the author’s lab.

SARS CoV-2 病毒(COVID-19)于 2019 年末作为一种高传染性人类病原体出现。起始于中国,但迅速开始在全球蔓延,并很快成为大流行病。据报道,迄今已有 700 多万人死亡,摧毁了全球数百万个家庭。自 2020 年初以来,羟氯喹、氯喹、雷米地韦、法非拉韦和阿比多等几种药物已进行了一些临床研究,但其安全性问题仍然严重。然而,从 2019 年末开始的一年内,成功发明了几种疫苗来预防人类感染。几乎与此同时,还发现了两种药物。这两种药物是辉瑞公司的 PAXLOVID™(尼伐他韦、利托那韦)和默克公司的 molnupiravir,它们很快获得了美国食品和药物管理局的批准,用于紧急治疗 COVID-19。但很快就有报道称,使用这些药物进行治疗面临一些挑战,尤其是对于那些免疫力低下或具有疫苗免疫力并长期遭受感染的患者(称为长期 COVID)。治疗长期感染者的复杂问题仍未得到解决。因此,迫切需要发现新的药物来帮助治疗新出现的 COVID-19 问题。但必须指出的是,发现新的 COVID-19 治疗药物,尤其是小分子药物并非易事。不过,目前已有多篇关于 COVID-19 药物发现尝试的优秀综述,包括少量关于实现这一目标的理论方法的文章。本综述总结了发现 COVID-19 药物的理论尝试、挑战和未来机遇,以及作者实验室所做的努力。
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引用次数: 0
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