首页 > 最新文献

Journal of Mathematical Chemistry最新文献

英文 中文
Analysis and numerical solution of singularly perturbed partial differential equations with large spatial delays and integral boundary conditions: applications in chemical and catalytic systems 具有大空间延迟和积分边界条件的奇摄动偏微分方程的分析和数值解:在化学和催化系统中的应用
IF 2 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-05-26 DOI: 10.1007/s10910-025-01737-6
Parvin Kumari, Jesus Vigo-Aguiar, Garima Agarwal

This work proposes a hybrid numerical strategy to effectively solve the singularly perturbed partial differential equations (SPPDEs) with integral boundary conditions and substantial spatial delays. For the time discretization, the Crank-Nicolson scheme was chosen because of its stability and second-order precision. In order to maximize accuracy in the vicinity of layers coming from the tiny perturbation parameter and delay parameter, the computational implementation will be carried out using a non-uniform Shishkin-type mesh for spatial discretization using cubic spline interpolation. The approach is tested numerically to verify its robustness and efficiency with respect to integral boundary conditions and delayed feedback. Applications to reaction-diffusion systems, catalytic reactions in porous media, and transport-reaction dynamics in tubular reactors are presented to illustrate the effectiveness of the proposed approach.

本文提出了一种混合数值策略来有效地求解具有积分边界条件和大量空间延迟的奇异摄动偏微分方程。对于时间离散,由于其稳定性和二阶精度,选择了Crank-Nicolson格式。为了使来自微小扰动参数和延迟参数的层附近的精度最大化,将使用非均匀shishkin型网格进行三次样条插值的空间离散化计算实现。数值实验验证了该方法在积分边界条件和延迟反馈条件下的鲁棒性和有效性。应用于反应扩散系统,多孔介质中的催化反应,以及管式反应器中的输运反应动力学,以说明所提出的方法的有效性。
{"title":"Analysis and numerical solution of singularly perturbed partial differential equations with large spatial delays and integral boundary conditions: applications in chemical and catalytic systems","authors":"Parvin Kumari,&nbsp;Jesus Vigo-Aguiar,&nbsp;Garima Agarwal","doi":"10.1007/s10910-025-01737-6","DOIUrl":"10.1007/s10910-025-01737-6","url":null,"abstract":"<div><p>This work proposes a hybrid numerical strategy to effectively solve the singularly perturbed partial differential equations (SPPDEs) with integral boundary conditions and substantial spatial delays. For the time discretization, the Crank-Nicolson scheme was chosen because of its stability and second-order precision. In order to maximize accuracy in the vicinity of layers coming from the tiny perturbation parameter and delay parameter, the computational implementation will be carried out using a non-uniform Shishkin-type mesh for spatial discretization using cubic spline interpolation. The approach is tested numerically to verify its robustness and efficiency with respect to integral boundary conditions and delayed feedback. Applications to reaction-diffusion systems, catalytic reactions in porous media, and transport-reaction dynamics in tubular reactors are presented to illustrate the effectiveness of the proposed approach.</p></div>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":"63 8","pages":"1689 - 1714"},"PeriodicalIF":2.0,"publicationDate":"2025-05-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144909878","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Floating spherical Gaussian orbital model: a brief overview 浮动球面高斯轨道模型:简要概述
IF 2 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-05-17 DOI: 10.1007/s10910-025-01735-8
Hiteshi Tandon, Tanmoy Chakraborty

The Floating spherical Gaussian orbital model has existed for nearly half a century, yet it remains one of the lesser researched areas. Considering the potential of the model to address significant quantum-based or molecular problems, this article aims to bring renewed attention to this long neglected concept. This review presents, a brief overview of the background, literature and current status of the method, and concludes with suggestions for future research.

浮动球面高斯轨道模型已经存在了近半个世纪,但它仍然是研究较少的领域之一。考虑到该模型在解决重要的量子或分子问题方面的潜力,本文旨在重新关注这个长期被忽视的概念。本文简要介绍了该方法的研究背景、文献和研究现状,并对今后的研究提出了建议。
{"title":"Floating spherical Gaussian orbital model: a brief overview","authors":"Hiteshi Tandon,&nbsp;Tanmoy Chakraborty","doi":"10.1007/s10910-025-01735-8","DOIUrl":"10.1007/s10910-025-01735-8","url":null,"abstract":"<div><p>The Floating spherical Gaussian orbital model has existed for nearly half a century, yet it remains one of the lesser researched areas. Considering the potential of the model to address significant quantum-based or molecular problems, this article aims to bring renewed attention to this long neglected concept. This review presents, a brief overview of the background, literature and current status of the method, and concludes with suggestions for future research.</p></div>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":"63 7","pages":"1555 - 1565"},"PeriodicalIF":2.0,"publicationDate":"2025-05-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145166981","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The numerical solution of the adsorption integral equation with Langmuir-kernel Part 1: approximations langmuir核吸附积分方程的数值解。第1部分:近似
IF 2 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-05-16 DOI: 10.1007/s10910-025-01724-x
Steffen Arnrich, Grit Kalies

The qualitative relationship between the adsorption energy distribution of a microporous adsorbent and its total isotherms is modeled by the adsorption integral equation with Langmuir kernel. Due to the instability of the adsorption integral equation, a regularization is required. Recently, we have developed a general regularization using a transformation that will now be specialized for numerical application. In this paper, we perform the first step to this end, namely the construction of an approximation of the transformed total isotherm from finitely many measurement points. The method presented here is based on discrete convolution and is also suitable for the approximation of more general functions and their spectral functions. A full error analysis is given. In particular, the influences of the measurement error, the discretization error and the truncation error on the quality of the approximation of the transformed total isotherm are investigated.

用带Langmuir核的吸附积分方程模拟了微孔吸附剂的吸附能分布与其总等温线之间的定性关系。由于吸附积分方程的不稳定性,需要进行正则化。最近,我们已经开发了一个通用的正则化使用变换,现在将专门用于数值应用。在本文中,我们执行了为此目的的第一步,即从有限多个测点构造变换后的总等温线的近似值。本文提出的方法基于离散卷积,也适用于更一般的函数及其谱函数的逼近。给出了完整的误差分析。特别研究了测量误差、离散化误差和截断误差对变换后的总等温线近似质量的影响。
{"title":"The numerical solution of the adsorption integral equation with Langmuir-kernel Part 1: approximations","authors":"Steffen Arnrich,&nbsp;Grit Kalies","doi":"10.1007/s10910-025-01724-x","DOIUrl":"10.1007/s10910-025-01724-x","url":null,"abstract":"<div><p>The qualitative relationship between the adsorption energy distribution of a microporous adsorbent and its total isotherms is modeled by the adsorption integral equation with Langmuir kernel. Due to the instability of the adsorption integral equation, a regularization is required. Recently, we have developed a general regularization using a transformation that will now be specialized for numerical application. In this paper, we perform the first step to this end, namely the construction of an approximation of the transformed total isotherm from finitely many measurement points. The method presented here is based on discrete convolution and is also suitable for the approximation of more general functions and their spectral functions. A full error analysis is given. In particular, the influences of the measurement error, the discretization error and the truncation error on the quality of the approximation of the transformed total isotherm are investigated.</p></div>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":"63 7","pages":"1650 - 1678"},"PeriodicalIF":2.0,"publicationDate":"2025-05-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10910-025-01724-x.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145166173","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Magnetic and thermal properties of phosphorene quantum rings 磷系量子环的磁性和热性质
IF 2 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-05-16 DOI: 10.1007/s10910-025-01732-x
Xilong Bai, Zhensheng Lu, Liu Long

We consider an electron confined in a quantum ring (QR) defined electrostatically within the phosphorene monolayer. A confinement potential with an elliptical shape is employed to account for the anisotropy of the effective masses. The Schrödinger equation is solved, leading to the determination of the energy levels. Subsequently, the Shannon formalism is applied to compute the probability distribution and partition function of the system. Finally, the magnetic and thermodynamic properties of the phosphorene QR are analyzed. The results reveal that the magnetic susceptibility exhibits a negative value, indicative of diamagnetic behavior. A maximum value of magnetic susceptibility is observed at low temperatures and high magnetic fields. At elevated magnetic temperatures, the specific heat remains constant, even in the absence of an external magnetic field.

我们考虑一个电子被限制在一个量子环(QR)静电定义在磷烯单层。采用椭圆约束势来解释有效质量的各向异性。求解Schrödinger方程,从而确定能级。随后,应用香农公式计算了系统的概率分布和配分函数。最后,分析了磷二烯QR的磁性和热力学性质。结果表明,其磁化率为负值,表明其具有抗磁性。在低温和强磁场下,磁化率达到最大值。在磁场温度升高的情况下,即使没有外部磁场,比热也保持不变。
{"title":"Magnetic and thermal properties of phosphorene quantum rings","authors":"Xilong Bai,&nbsp;Zhensheng Lu,&nbsp;Liu Long","doi":"10.1007/s10910-025-01732-x","DOIUrl":"10.1007/s10910-025-01732-x","url":null,"abstract":"<div><p>We consider an electron confined in a quantum ring (QR) defined electrostatically within the phosphorene monolayer. A confinement potential with an elliptical shape is employed to account for the anisotropy of the effective masses. The Schrödinger equation is solved, leading to the determination of the energy levels. Subsequently, the Shannon formalism is applied to compute the probability distribution and partition function of the system. Finally, the magnetic and thermodynamic properties of the phosphorene QR are analyzed. The results reveal that the magnetic susceptibility exhibits a negative value, indicative of diamagnetic behavior. A maximum value of magnetic susceptibility is observed at low temperatures and high magnetic fields. At elevated magnetic temperatures, the specific heat remains constant, even in the absence of an external magnetic field.</p></div>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":"63 7","pages":"1636 - 1649"},"PeriodicalIF":2.0,"publicationDate":"2025-05-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145166171","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Beyond the SNR-resolution uncertainty principle: Optimized derivative fast Fourier transform for NMR diagnostics in medicine 超越信噪比分辨率不确定原理:用于医学核磁共振诊断的优化导数快速傅立叶变换
IF 2 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-05-14 DOI: 10.1007/s10910-025-01733-w
Dževad Belkić, Karen Belkić

The present study is on proton magnetic resonance spectroscopy (MRS), as it applies to tumor diagnostics in cancer precision medicine. The goal with the employed patients’ data, subjected to shape estimations alone with no fitting, is to reconstruct self-contained quantitative information of diagnostic relevance. This can be accomplished by proper evaluation of physical metabolites, especially cancer biomarkers (lactates, cholines, citrates,...). Such information is completely opaque in the encoded time signals, but can be transparent in the frequency domain. The optimized derivative fast Fourier transform (dFFT) can meet the challenge. The thorniest stumbling blocks in MRS are abundant overlapping resonances of low resolution and poor signal-to-noise ratio (SNR). Attempts to increase resolution are marred by decreased SNR. The long-sought strategy of MRS, simultaneous improvement of resolution and SNR, is achievable by the optimized dFFT. With the implied aid to decision-making, this is illustrated for ovarian MRS data encoded from benign and malignant human biofluid samples.

质子磁共振波谱(MRS)技术在肿瘤精准医学中的应用前景十分广阔。目标与受雇患者的数据,受形状估计单独没有拟合,是重建诊断相关性的自包含的定量信息。这可以通过适当评估身体代谢物,特别是癌症生物标志物(乳酸盐、胆碱、柠檬酸盐等)来实现。这些信息在编码的时间信号中是完全不透明的,但在频域可以是透明的。优化后的导数快速傅里叶变换(dFFT)可以应对这一挑战。磁共振成像最棘手的障碍是大量低分辨率的重叠共振和较差的信噪比。提高分辨率的尝试会受到信噪比降低的影响。优化后的dFFT实现了MRS长期追求的策略,即同时提高分辨率和信噪比。与隐含的辅助决策,这是说明从良性和恶性人类生物液样本编码卵巢MRS数据。
{"title":"Beyond the SNR-resolution uncertainty principle: Optimized derivative fast Fourier transform for NMR diagnostics in medicine","authors":"Dževad Belkić,&nbsp;Karen Belkić","doi":"10.1007/s10910-025-01733-w","DOIUrl":"10.1007/s10910-025-01733-w","url":null,"abstract":"<div><p>The present study is on proton magnetic resonance spectroscopy (MRS), as it applies to tumor diagnostics in cancer precision medicine. The goal with the employed patients’ data, subjected to shape estimations alone with no fitting, is to reconstruct self-contained quantitative information of diagnostic relevance. This can be accomplished by proper evaluation of physical metabolites, especially cancer biomarkers (lactates, cholines, citrates,...). Such information is completely opaque in the encoded time signals, but can be transparent in the frequency domain. The optimized derivative fast Fourier transform (dFFT) can meet the challenge. The thorniest stumbling blocks in MRS are abundant overlapping resonances of low resolution and poor signal-to-noise ratio (SNR). Attempts to increase resolution are marred by decreased SNR. The long-sought strategy of MRS, simultaneous improvement of resolution and SNR, is achievable by the optimized dFFT. With the implied aid to decision-making, this is illustrated for ovarian MRS data encoded from benign and malignant human biofluid samples.</p></div>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":"63 7","pages":"1598 - 1635"},"PeriodicalIF":2.0,"publicationDate":"2025-05-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10910-025-01733-w.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145165917","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Condensed-to-bond dual descriptor for the analysis of electron density rearrangement in π-conjugated compounds 用于分析π共轭化合物中电子密度重排的缩合-键双描述子
IF 2 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-05-10 DOI: 10.1007/s10910-025-01730-z
Ricardo Pino–Rios

This study proposes the application of the bond dual descriptor, computed using finite difference approximation, to investigate the electron density reorganization in π-conjugated compounds upon nucleophilic/electrophilic attack. Compared to the traditional bond Fukui function analysis, this descriptor offers a simpler approach, reducing the complexity of potential rearrangement scenarios in half and simplifying the interpretation. A series of ethylene derivatives have been tested allowing to explain the activation of the double bond in ethylene derivatives, the rearrangement of the electron density and its reduction in activation energies. In addition, it is shown that it is possible to explain the reactivity on Michael acceptors, the rearrangement of cis-1,3,5-hexatriene to form 1,3-cyclohexadiene and the preference of C60 to react through its [6,6] over [5,6] bonds. The bond dual descriptor complements the atomic dual descriptor, enabling a comprehensive analysis of the chemical reactivity of π-conjugated compounds.

本研究提出应用有限差分近似计算的键对偶描述子来研究亲核/亲电攻击下π共轭化合物的电子密度重组。与传统的键福井函数分析相比,该描述符提供了一种更简单的方法,将潜在重排场景的复杂性降低了一半,简化了解释。对一系列乙烯衍生物进行了测试,以解释乙烯衍生物中双键的活化,电子密度的重排及其活化能的降低。此外,研究表明可以解释Michael受体上的反应性,顺式-1,3,5-己二烯重排形成1,3-环己二烯,以及C60通过其[6,6]键而不是[5,6]键反应的偏好。键对偶描述子是对原子对偶描述子的补充,可以对π共轭化合物的化学反应性进行综合分析。
{"title":"Condensed-to-bond dual descriptor for the analysis of electron density rearrangement in π-conjugated compounds","authors":"Ricardo Pino–Rios","doi":"10.1007/s10910-025-01730-z","DOIUrl":"10.1007/s10910-025-01730-z","url":null,"abstract":"<div><p>This study proposes the application of the bond dual descriptor, computed using finite difference approximation, to investigate the electron density reorganization in π-conjugated compounds upon nucleophilic/electrophilic attack. Compared to the traditional bond Fukui function analysis, this descriptor offers a simpler approach, reducing the complexity of potential rearrangement scenarios in half and simplifying the interpretation. A series of ethylene derivatives have been tested allowing to explain the activation of the double bond in ethylene derivatives, the rearrangement of the electron density and its reduction in activation energies. In addition, it is shown that it is possible to explain the reactivity on Michael acceptors, the rearrangement of cis-1,3,5-hexatriene to form 1,3-cyclohexadiene and the preference of C<sub>60</sub> to react through its [6,6] over [5,6] bonds. The bond dual descriptor complements the atomic dual descriptor, enabling a comprehensive analysis of the chemical reactivity of π-conjugated compounds.</p></div>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":"63 7","pages":"1588 - 1597"},"PeriodicalIF":2.0,"publicationDate":"2025-05-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145164192","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
To a mechanical model of synthetic catch-bonds 合成捕获键的机械模型
IF 2 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-05-08 DOI: 10.1007/s10910-025-01731-y
Wolfgang Quapp, Josep Maria Bofill, Kerim C. Dansuk, Sinan Keten

We support a preliminary determination of the catch-bond character of a mechanical–chemical toy model using a tweezers construction with some modifications. We discuss a theoretical analysis of the problem using Newton trajectories. We propose a two-dimensional potential energy surfaces for this model. We discuss the slip, ideal and catch-bonds for this model using the previous potential parts of Dansuk and Keten (Matter 1:911, 2019). Chemical examples of the ansatz are allosteric reactions, especially FimH proteins. We note again that Newton trajectories provide the theoretical background of mechanochemistry. Construction of a potential energy surface and use of Newton trajectories by Wolfram Mathematica. Calculation of real catch bond behavior. We get for a tweezers model the catch bond behavior.

Two barriers under external force, F. The catch-bond barrier increases.

我们支持使用镊子结构进行一些修改的机械-化学玩具模型的捕获键特性的初步确定。我们用牛顿轨迹讨论了这个问题的理论分析。我们提出了该模型的二维势能面。我们使用Dansuk和Keten的先前潜在部分(Matter 1:911, 2019)讨论了该模型的滑动、理想和捕获键。化学反应的例子是变构反应,尤其是FimH蛋白。我们再次注意到,牛顿轨迹提供了力学化学的理论背景。Wolfram Mathematica的势能面构造和牛顿轨迹的使用。实际捕获键行为的计算。我们得到了一个镊子模型的捕获键行为。两个障碍在外力作用下,捕获键障碍增大。
{"title":"To a mechanical model of synthetic catch-bonds","authors":"Wolfgang Quapp,&nbsp;Josep Maria Bofill,&nbsp;Kerim C. Dansuk,&nbsp;Sinan Keten","doi":"10.1007/s10910-025-01731-y","DOIUrl":"10.1007/s10910-025-01731-y","url":null,"abstract":"<p>We support a preliminary determination of the catch-bond character of a mechanical–chemical toy model using a tweezers construction with some modifications. We discuss a theoretical analysis of the problem using Newton trajectories. We propose a two-dimensional potential energy surfaces for this model. We discuss the slip, ideal and catch-bonds for this model using the previous potential parts of Dansuk and Keten (Matter 1:911, 2019). Chemical examples of the ansatz are allosteric reactions, especially FimH proteins. We note again that Newton trajectories provide the theoretical background of mechanochemistry. Construction of a potential energy surface and use of Newton trajectories by Wolfram Mathematica. Calculation of real catch bond behavior. We get for a tweezers model the catch bond behavior.</p><p> Two barriers under external force, F. The catch-bond barrier increases.</p>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":"63 7","pages":"1566 - 1587"},"PeriodicalIF":2.0,"publicationDate":"2025-05-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10910-025-01731-y.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145163351","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Closed-form representations of the Coulomb integral over hydrogenic orbitals 氢轨道上库仑积分的封闭形式表示
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-05-07 DOI: 10.1007/s10910-025-01734-9
Balakrishnan Viswanathan, Darien DeWolf

The theory of atomic structure is conceptually built on hydrogen-like orbitals and computed using Slater or Gaussian orbitals, owing to the relative difficulty of computing integrals concerning the hydrogenic orbitals. The optimal set of hydrogenic orbitals in an atom is obtained by minimizing the energy with respect to the orbitals. The Coulomb integral is difficult to compute due to the inverse distance relationship. In this paper, we evaluate the Coulomb integral and its derivative using two expressions for the inverse distance: the Laplace expression and the Legendre expression. The two expressions for inverse distance are similar and yield different integral forms. The Laplace expression yields the Coulomb integral as a sum of hypergeometric functions while the Legendre expression yields a compact polynomial form. The derivative of the Coulomb integral (computed using both forms) with respect to the decay constant is also provided.

由于计算氢轨道的积分相对困难,原子结构理论在概念上建立在类氢轨道上,并使用斯莱特轨道或高斯轨道进行计算。一个原子中最优的氢轨道集是通过最小化相对于轨道的能量得到的。由于距离的反比关系,库仑积分很难计算。本文用拉普拉斯表达式和勒让德表达式求出了逆距离的库仑积分及其导数。逆距离的两个表达式相似,但产生不同的积分形式。拉普拉斯表达式得到的库仑积分是超几何函数的和,而勒让德表达式得到的是紧多项式形式。还提供了库仑积分(使用两种形式计算)对衰减常数的导数。
{"title":"Closed-form representations of the Coulomb integral over hydrogenic orbitals","authors":"Balakrishnan Viswanathan,&nbsp;Darien DeWolf","doi":"10.1007/s10910-025-01734-9","DOIUrl":"10.1007/s10910-025-01734-9","url":null,"abstract":"<div><p>The theory of atomic structure is conceptually built on hydrogen-like orbitals and computed using Slater or Gaussian orbitals, owing to the relative difficulty of computing integrals concerning the hydrogenic orbitals. The optimal set of hydrogenic orbitals in an atom is obtained by minimizing the energy with respect to the orbitals. The Coulomb integral is difficult to compute due to the inverse distance relationship. In this paper, we evaluate the Coulomb integral and its derivative using two expressions for the inverse distance: the Laplace expression and the Legendre expression. The two expressions for inverse distance are similar and yield different integral forms. The Laplace expression yields the Coulomb integral as a sum of hypergeometric functions while the Legendre expression yields a compact polynomial form. The derivative of the Coulomb integral (computed using both forms) with respect to the decay constant is also provided.</p></div>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":"63 6","pages":"1523 - 1550"},"PeriodicalIF":1.7,"publicationDate":"2025-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144073579","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Low-order efficient Adams–Bashforth–Moulton methods for first-order IVPs with oscillating solutions 具有振荡解的一阶ivp的低阶有效Adams-Bashforth-Moulton方法
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-05-06 DOI: 10.1007/s10910-025-01727-8
Chia-Liang Lin, Theodore E. Simos

The methodology for calculating the phase-lag and amplification-factor for both explicit and implicit multistep methods for first-order differential equations was recently developed by one of the authors. The objective of this study is to develop low-order Adams–Bashforth–Moulton predictor–corrector algorithms that eradicate phase-lag, amplification-factor. The stability regions of the newly established methodologies will also be highlighted. Furthermore, we will examine our results from numerical experiments employing the newly developed approaches.

一阶微分方程的显式多步法和隐式多步法的相位滞后和放大因子的计算方法是最近由一位作者提出的。本研究的目的是开发低阶Adams-Bashforth-Moulton预测校正算法,以消除相位滞后、放大因子。还将强调新确立的方法的稳定区域。此外,我们将采用新开发的方法检查我们的数值实验结果。
{"title":"Low-order efficient Adams–Bashforth–Moulton methods for first-order IVPs with oscillating solutions","authors":"Chia-Liang Lin,&nbsp;Theodore E. Simos","doi":"10.1007/s10910-025-01727-8","DOIUrl":"10.1007/s10910-025-01727-8","url":null,"abstract":"<div><p>The methodology for calculating the phase-lag and amplification-factor for both explicit and implicit multistep methods for first-order differential equations was recently developed by one of the authors. The objective of this study is to develop low-order Adams–Bashforth–Moulton predictor–corrector algorithms that eradicate phase-lag, amplification-factor. The stability regions of the newly established methodologies will also be highlighted. Furthermore, we will examine our results from numerical experiments employing the newly developed approaches.</p></div>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":"63 6","pages":"1496 - 1522"},"PeriodicalIF":1.7,"publicationDate":"2025-05-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144073751","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
An efficient approximation algorithm for the nonlinear reaction: diffusion equations in an electro catalytic thin film models using Hosoya polynomials 非线性反应扩散方程的有效逼近算法:电催化薄膜模型的细谷多项式
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-04-26 DOI: 10.1007/s10910-025-01728-7
M. Bhuvaneswari, V. Vinoba, G. Hariharan

The paper discusses a mathematical model for non-Michaelis–Menten kinetics, which involves a substrate forming a complex with the immobilized catalyst. A new Hosoya polynomial approximation method (HPAM) is applied for solving the reaction–diffusion equations. Analytical expressions are established to the nonlinear reaction–diffusion equation arising in electro catalytic thin film with an arbitrary shape models using the Hosoya polynomials. The main idea of the proposed research work is that the nonlinear reaction–diffusion problems are converted into a system of algebraic equations using the Hosoya polynomials. Analytical expressions for substrate concentration profiles are derived in closed and simplified forms for various geometries (planar, cylindrical, and spherical), along with the corresponding steady-state amperometric current response. The proposed results are validated with the other available results. Moreover, the utility of HPAM is investigated to be simple, straight forward, efficient and flexible. Also, the paper examines how different parameters influence the substrate concentration in the above models.

本文讨论了非米切里斯-门腾动力学的数学模型,该模型涉及底物与固定化催化剂形成配合物。提出了一种新的细谷多项式近似法(HPAM)来求解反应扩散方程。利用细谷多项式建立了任意形状电催化薄膜中非线性反应扩散方程的解析表达式。提出的研究工作的主要思想是将非线性反应扩散问题转化为使用细谷多项式的代数方程组。对于各种几何形状(平面、圆柱形和球形),以及相应的稳态安培电流响应,以封闭和简化的形式导出了衬底浓度曲线的解析表达式。所提结果与其他可用结果进行了验证。此外,还研究了HPAM具有简单、直接、高效、灵活等优点。此外,本文还考察了不同参数对上述模型中底物浓度的影响。
{"title":"An efficient approximation algorithm for the nonlinear reaction: diffusion equations in an electro catalytic thin film models using Hosoya polynomials","authors":"M. Bhuvaneswari,&nbsp;V. Vinoba,&nbsp;G. Hariharan","doi":"10.1007/s10910-025-01728-7","DOIUrl":"10.1007/s10910-025-01728-7","url":null,"abstract":"<div><p>The paper discusses a mathematical model for non-Michaelis–Menten kinetics, which involves a substrate forming a complex with the immobilized catalyst. A new Hosoya polynomial approximation method (HPAM) is applied for solving the reaction–diffusion equations. Analytical expressions are established to the nonlinear reaction–diffusion equation arising in electro catalytic thin film with an arbitrary shape models using the Hosoya polynomials. The main idea of the proposed research work is that the nonlinear reaction–diffusion problems are converted into a system of algebraic equations using the Hosoya polynomials. Analytical expressions for substrate concentration profiles are derived in closed and simplified forms for various geometries (planar, cylindrical, and spherical), along with the corresponding steady-state amperometric current response. The proposed results are validated with the other available results. Moreover, the utility of HPAM is investigated to be simple, straight forward, efficient and flexible. Also, the paper examines how different parameters influence the substrate concentration in the above models.</p></div>","PeriodicalId":648,"journal":{"name":"Journal of Mathematical Chemistry","volume":"63 6","pages":"1475 - 1495"},"PeriodicalIF":1.7,"publicationDate":"2025-04-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144074189","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Mathematical Chemistry
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1