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Approximate solutions to a degenerate reaction–diffusion model: a pragmatic sharp front approach 退化反应扩散模型的近似解:一种实用的尖锐前沿方法
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-02-28 DOI: 10.1007/s10910-025-01713-0
Jordan Hristov

Approximate analytical solutions to a degenerate reaction–diffusion model pertinent to population dynamics and chemical kinetics have been developed. Both the degenerate diffusivity and the growth function have been formulated as power-law functions. The integral-balance method applied to a preliminary transformed model (via the Danckwerts transformation) and by a direct integration approach has provided physically reasonable results. The model equation scaling has revealed the Fourier number as controlling dimensionless group.

给出了与种群动力学和化学动力学相关的简并反应扩散模型的近似解析解。简并扩散率和生长函数都被表示为幂律函数。将积分平衡法应用于初步转换模型(通过Danckwerts转换),并通过直接积分方法提供了物理上合理的结果。模型方程缩放揭示了傅里叶数是控制无量纲群。
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引用次数: 0
Einstein-Smoluchowski-type relations for real gases 真实气体的einstein - smoluchowski型关系
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-02-20 DOI: 10.1007/s10910-025-01711-2
Alexander E. Dubinov

Derivation of exact explicit Einstein-Smolukhowski (ES) relations for non-ideal real gases is purpose of this paper. The ES method of the derivation was modified for this purpose. The new method is based on the rule of differentiation of inverse functions known in mathematics. The modified method turned out to be more effective than the traditional one: the fact is that the modified method always works, while the traditional method is effective only for a small number of simple equations of state (EoS). The method has been tested for four popular EoS: the Lorentz EoS, the Van der Waals EoS, the Peng-Robinson EoS, and the Dieterici EoS. As a result, exact explicit ES formulas for gases obeying these EoS were derived. It was found that the ratio of the diffusion coefficient to the particle mobility coefficient depends not only on the gas temperature, but also on its concentration for all examples of gases. The derived exact formulas can be used to debug codes that simulate molecular dynamics.

本文的目的是推导非理想实气体的精确显式爱因斯坦-斯莫鲁科夫斯基(ES)关系。为此,对ES的推导方法进行了改进。新方法是基于数学中已知的反函数微分法则。结果表明,改进后的方法比传统方法更有效:改进后的方法总是有效的,而传统方法只对少数简单的状态方程有效。该方法已经对四种流行的方程组进行了测试:洛伦兹方程组、范德华方程组、Peng-Robinson方程组和Dieterici方程组。结果,导出了符合这些方程的气体的精确显式ES公式。结果表明,扩散系数与粒子迁移系数的比值不仅与气体温度有关,而且与气体浓度有关。导出的精确公式可用于调试模拟分子动力学的代码。
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引用次数: 0
Optimized derivative fast Fourier transform: Splitting singlet-appearing resonances to genuine multiplets in ovarian NMR spectra from encoded time signals 优化的导数快速傅立叶变换:从编码的时间信号中分裂卵巢核磁共振光谱中出现的单重共振到真正的多重共振
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-02-14 DOI: 10.1007/s10910-025-01709-w
Dževad Belkić, Karen Belkić

We address the demanding J-spectroscopy part of nuclear magnetic resonance (NMR) for encoded time signals. In the fast Fourier transform (FFT), the J-coupled multiplets are mostly unresolved even with strong magnetic fields (e.g. 600 MHz, 14.1T). The problem is further exacerbated by minuscule chemical shift bands hosting such multiplets. Derivative estimations might be tried as an alternative strategy. However, too tightly overlapped resonances require higher-order derivative estimations. These, in turn, uncontrollably enhance the reconstruction instabilities. Hence, a robust optimizing stabilizer is needed. It is provided by the optimized derivative fast Fourier transform, which simultaneously increases resolution and reduces noise. We presently demonstrate that higher-orders (up to 15) of this processor can accurately resolve the J-coupled multiplets into their genuine components hidden within the singlet-appearing resonances in the FFT spectra. This is exemplified with the challenging two triplets (taurine, myo-inositol lying within only 0.02 ppm) for time signals encoded by ovarian NMR spectroscopy from a patient’s excised cancerous cyst fluid specimen.

我们解决了核磁共振(NMR)对编码时间信号要求很高的j谱部分。在快速傅里叶变换(FFT)中,即使在强磁场(例如600 MHz, 14.1T)下,j耦合多态也大多无法解析。承载这种多重态的微小化学位移带进一步加剧了这个问题。可以尝试导数估计作为一种替代策略。然而,过于紧密重叠的共振需要高阶导数估计。这些反过来又不可控制地增加了重建的不稳定性。因此,需要一个鲁棒优化稳定器。通过优化的导数快速傅立叶变换,在提高分辨率的同时降低了噪声。我们目前证明,该处理器的高阶(高达15阶)可以准确地将j耦合多态分解为隐藏在FFT光谱中单线共振中的真实分量。这是具有挑战性的两个三胞胎(牛磺酸,肌醇含量仅为0.02 ppm)的例子,通过卵巢核磁共振光谱从患者切除的癌性囊肿液体标本中编码时间信号。
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引用次数: 0
Optimizing Arrhenius parameters for multi-step reactions via metaheuristic algorithms 通过元启发式算法优化多步反应的阿伦尼乌斯参数
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-02-06 DOI: 10.1007/s10910-025-01710-3
AliReza Eshaghi, Zeinab Pouransari

In combustion simulation, the Arrhenius equation is a key tool for modeling multi-step reactions such as propane and methane reactions. It describes a relationship between the reaction rate, temperature, the pre-exponential factor, and activation energy. Applying these parameters outside their validated temperature and pressure ranges, or for unverified reactions, can result in important errors. The present study optimizes the coefficients of the Arrhenius model for multi-step combustion reactions, by utilizing experimental data and advanced optimization techniques. Our methodology incorporates metaheuristics techniques such as least squares minimization, particle swarm optimization, ant colony optimization, the slime mold algorithm, and the whale optimization algorithm. The results indicate that the optimized coefficients significantly improve the predictions while reducing computational time and associated costs. Furthermore, this paper presents a comprehensive comparative analysis of the various optimization techniques utilized and clarifies the advantages and limitations of each technique in the context of Arrhenius equation optimization.

在燃烧模拟中,Arrhenius方程是模拟丙烷和甲烷等多步反应的重要工具。它描述了反应速率、温度、指前因子和活化能之间的关系。将这些参数应用于其验证的温度和压力范围之外,或用于未经验证的反应,可能会导致重要的错误。本研究利用实验数据和先进的优化技术,对多步燃烧反应的Arrhenius模型系数进行了优化。我们的方法结合了元启发式技术,如最小二乘最小化、粒子群优化、蚁群优化、黏菌算法和鲸鱼优化算法。结果表明,优化后的系数显著提高了预测精度,同时减少了计算时间和相关成本。此外,本文对所采用的各种优化技术进行了全面的比较分析,并在阿伦尼乌斯方程优化的背景下阐明了每种技术的优点和局限性。
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引用次数: 0
Numerical treatment of singularly perturbed turning point problems with delay in time 具有时间延迟的奇异扰动转折点问题的数值处理
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-02-04 DOI: 10.1007/s10910-025-01707-y
Satpal Singh, Devendra Kumar, J. Vigo-Aguiar

This paper proposes a uniformly convergent numerical method for a class of singularly perturbed turning point problems with a time-lag defined on a rectangular domain. We consider an interior repulsive turning point with odd multiplicity (geqslant 1). Twin boundary layers arise in the proximity of endpoints of the spatial domain due to the presence of the perturbation parameter. Preliminary results such as minimum principle, stability estimate, and solution derivative bounds for the continuous problem applicable in the convergence analysis are presented. First, we employ the Crank–Nicolson scheme to semi-discretize the continuous problem in the time direction, and then the cubic (mathscr {B})-spline functions on an appropriate Shishkin mesh are used to get a full discretization. The convergence analysis uses the maximum norm to obtain parameter-uniform error estimates. Three test problems are solved numerically to validate the theoretical results and confirm the scheme’s effectiveness.

本文针对矩形域上的一类带时滞奇摄动拐点问题,提出了一种一致收敛的数值方法。我们考虑一个具有奇多重性(geqslant 1)的内排斥拐点。由于扰动参数的存在,在空间域的端点附近产生双边界层。给出了适用于收敛分析的连续问题的最小值原理、稳定性估计和解的导数界等初步结果。首先采用Crank-Nicolson格式在时间方向上对连续问题进行半离散,然后在适当的Shishkin网格上使用三次(mathscr {B})样条函数进行完全离散。收敛分析采用最大范数得到参数一致的误差估计。对三个试验问题进行了数值求解,验证了理论结果和方案的有效性。
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引用次数: 0
Vertex and face colorings of dodecahedron and its distortions for all irreducible representations: insights into dynamic chirality, pentagonal, Jahn–Teller and elongated distortions 十二面体的顶点和面着色及其所有不可约表示的畸变:对动态手性、五边形、扬-泰勒和拉长畸变的见解
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-02-03 DOI: 10.1007/s10910-025-01704-1
Krishnan Balasubramanian

We present combinatorial cum group theoretical generating function methods for vertex and face colorings of a dodecahedron for all irreducible representations of the icosahedral group. We demonstrate the usefulness of the Mȍbius inversion method. We consider several types of distortions arising from the highly symmetric dodecahedron, in particular, to an elongated dodecahedron and a pyrithohedron (Th). Elaborate combinatorial enumerations and tables of combinatorial numbers are explicitly constructed for all irreducible representations of both the distorted and the parent undistorted structures. It is shown that the combinatorial cum computational techniques provide new insights into the dynamic chirality arising from such distortions which include the pentagonal distortions, elongated distortions and so forth. We point out applications to the dynamic NMR and ESR spectroscopies as well to the dynamic stereochemistry of topological metamorphosis through a combination of combinatorics and group theory.

针对十二面体群的所有不可约表示,提出了十二面体顶点和面着色的组合群论生成函数方法。我们演示了Mȍbius反演方法的有用性。我们考虑了由高度对称的十二面体引起的几种类型的畸变,特别是细长十二面体和六面体(Th)。详细的组合枚举和组合数表被显式地构造为所有不可约表示的扭曲和父未扭曲结构。结果表明,组合计算技术为研究包括五边形畸变、拉长畸变等畸变引起的动态手性提供了新的思路。我们指出了通过组合学和群论的结合在动态核磁共振和ESR光谱以及拓扑变态的动态立体化学中的应用。
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引用次数: 0
The application of a fourteenth-order phase-fitting approach to enhance chemical problem-solving 十四阶相拟合方法的应用,以提高化学问题的解决
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-01-31 DOI: 10.1007/s10910-024-01701-w
Chia-Liang Lin, T. E. Simos

By using a strategy that accounts for fading phase-lag, phase-lag and all of its derivatives up to order six can be eliminated. The cost-efficient approach is a new strategy whose aims are to boost algebraic order (AOR) and reduce function evaluations (FEVs). The symbolic representation of the one-of-a-kind approach is PF6DPHFITN142SPS. This method is infinitely periodic since it is P-Stable. The proposed method is general enough to address a large class of periodic and oscillatory problems. This new method was used to solve the difficult problem of Schrödinger-type coupled differential equations in quantum chemistry. Given that each stage only requires (5 , FEVs), the new method could be seen as a cost-effective strategy. With a AOR of 14, we can greatly enhance our current situation.

通过使用一种考虑衰落相位滞后的策略,相位滞后及其所有高达6阶的导数都可以消除。成本效率方法是一种旨在提高代数阶数(AOR)和减少函数求值(FEVs)的新策略。这种独一无二的方法的符号表示是PF6DPHFITN142SPS。这种方法是无限周期的,因为它是p稳定的。所提出的方法具有足够的通用性,可以解决大量的周期和振荡问题。该方法用于解决量子化学中Schrödinger-type耦合微分方程的难题。考虑到每个阶段只需要(5 , FEVs),新方法可以被视为一种具有成本效益的策略。AOR为14,我们可以大大改善我们目前的状况。
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引用次数: 0
Investigation of real-world second-order singular differential equations by optimal homotopy analysis technique 用最优同伦分析技术研究现实世界二阶奇异微分方程
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-01-31 DOI: 10.1007/s10910-025-01703-2
Randhir Singh, Prabal Datta, Vandana Guleria, Nirupam Sahoo

Extensive studies have investigated second-order singular differential equations to model various phenomena in astrophysics, reaction-diffusion processes, and electrohydrodynamics. However, finding numerical and analytical solutions for these problems with appropriate boundary conditions is challenging due to their inherent nonlinearity. Our current study explores singular second-order differential equations (SSODEs) with boundary conditions, specifically those modelling the distribution of heat sources in the human head and the steady-state temperature distribution in a vessel before a thermal explosion. The fundamental idea behind our approach is initially transforming the differential equation into an equivalent integral form, thereby circumventing the singular behaviour. Subsequently, the optimal homotopy analysis method is employed to scrutinize two distinct models, i.e., the heat conduction model, the thermal explosion model and the spherical catalyst equation. Further, a detailed convergence analysis is conducted in a Banach space framework to ensure the method’s reliability. The accuracy of the new approach is checked by considering various numerical examples with different values of thermogenesis heat production, the Biot number, and metabolic thermogenesis slope. It has been shown that the proposed approach qualitatively and quantitatively approximates the solutions with higher precision than the existing Adomian decomposition method.

广泛的研究调查了二阶奇异微分方程来模拟天体物理学、反应扩散过程和电流体动力学中的各种现象。然而,由于这些问题固有的非线性,寻找具有适当边界条件的数值和解析解是具有挑战性的。我们目前的研究探索了具有边界条件的奇异二阶微分方程(SSODEs),特别是那些模拟人类头部热源分布和热爆炸前容器内稳态温度分布的方程。我们的方法背后的基本思想是首先将微分方程转化为等效积分形式,从而绕过奇异行为。随后,采用最优同伦分析方法对热传导模型、热爆炸模型和球形催化剂方程这两种不同的模型进行了研究。并在Banach空间框架下进行了详细的收敛性分析,保证了方法的可靠性。通过考虑不同产热值、Biot数和代谢产热斜率的数值实例,验证了新方法的准确性。结果表明,与现有的Adomian分解方法相比,该方法定性和定量地逼近解的精度更高。
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引用次数: 0
On the Rayleigh-Ritz method 关于瑞利-里兹方法
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-01-29 DOI: 10.1007/s10910-025-01706-z
Francisco M. Fernández

We give a simple proof of the well known fact that the approximate eigenvalues provided by the Rayleigh-Ritz method are increasingly accurate upper bounds to the exact ones. To this end, we resort to the variational principle and to a set of suitable projection operators.

我们给出了一个简单的证明,即 Rayleigh-Ritz 方法提供的近似特征值与精确特征值的上限越来越精确,这是众所周知的事实。为此,我们借助于变分原理和一组合适的投影算子。
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引用次数: 0
Pattern formation for a reversible biochemical reaction model with cross-diffusion and Michalis saturation 具有交叉扩散和米凯利斯饱和的可逆生化反应模型的模式形成
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-01-28 DOI: 10.1007/s10910-025-01705-0
Jing You, Gaihui Guo

This paper presents a qualitative study of a reversible biochemical reaction model with cross-diffusion and Michalis saturation. For the system without diffusion, the existence, stability and Hopf bifurcation of the positive equilibrium have been clearly determined. For the cross-diffusive system, the stability and Turing instability driven by cross-diffusion are studied according to the relationship between the self-diffusion and the cross-diffusion coefficients. Stability and cross-diffusion instability regions are theoretically determined in the plane of the cross-diffusion coefficients. The amplitude equation is derived by using the technique of multiple time scale. With the help of numerical simulation, we verify the analysis results.

本文对具有交叉扩散和 Michalis 饱和的可逆生化反应模型进行了定性研究。对于无扩散系统,明确确定了正平衡的存在性、稳定性和霍普夫分岔。对于交叉扩散体系,根据自扩散系数和交叉扩散系数之间的关系,研究了交叉扩散驱动的稳定性和图灵不稳定性。从理论上确定了交叉扩散系数平面上的稳定性和交叉扩散不稳定性区域。利用多时间尺度技术推导出振幅方程。在数值模拟的帮助下,我们验证了分析结果。
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引用次数: 0
期刊
Journal of Mathematical Chemistry
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