Pub Date : 2025-12-15eCollection Date: 2025-01-01DOI: 10.17912/micropub.biology.001864
Vinayan Tiruvellore, Mike Koegle
Autoimmune disorders such as Hashimoto's thyroiditis lack curative treatments, only therapeutic agents that treat symptoms very broadly and dampen the entire immune system, including healthy cells. Cytotoxic T-Lymphocyte Antigen-4 (CTLA-4) is an immune checkpoint receptor expressed on T cells, and in Hashimoto's thyroiditis the overexpression of CTLA-4 on dysfunctional immune cells is a key factor in disease progression. Here, we evaluated CTLA-4 antibody-antigen binding to specifically treat dysfunctional cells. Protein-protein docking identified Cluster 0 as the most stable pose (energy score -334), ChimeraX showed a buried surface area of 2,136 Ų and 1,023 hydrogen bonds, and in vitro assays confirmed binding.
{"title":"Evaluating CTLA-4 Antibody-Antigen Binding as a Model for Targeted Immunosuppressant Delivery in Hashimoto's Thyroiditis.","authors":"Vinayan Tiruvellore, Mike Koegle","doi":"10.17912/micropub.biology.001864","DOIUrl":"10.17912/micropub.biology.001864","url":null,"abstract":"<p><p>Autoimmune disorders such as Hashimoto's thyroiditis lack curative treatments, only therapeutic agents that treat symptoms very broadly and dampen the entire immune system, including healthy cells. Cytotoxic T-Lymphocyte Antigen-4 (CTLA-4) is an immune checkpoint receptor expressed on T cells, and in Hashimoto's thyroiditis the overexpression of CTLA-4 on dysfunctional immune cells is a key factor in disease progression. Here, we evaluated CTLA-4 antibody-antigen binding to specifically treat dysfunctional cells. Protein-protein docking identified Cluster 0 as the most stable pose (energy score -334), ChimeraX showed a buried surface area of 2,136 Ų and 1,023 hydrogen bonds, and in vitro assays confirmed binding.</p>","PeriodicalId":74192,"journal":{"name":"microPublication biology","volume":"2025 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12750151/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145879552","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-11eCollection Date: 2025-01-01DOI: 10.17912/micropub.biology.001825
Alyssa Vidal, Sandra Illescas, Vivian Le, Nathan Feldhorn, Sarah Khan, Mariano Loza-Coll
In rodents, exposure to cannabidiol (CBD) was shown to alter responses to alcohol, primarily via CB1/CB2 signaling. However, CBD also targets non-canonical receptors whose potential roles in modulating CBD-alcohol interactions remain unknown. We used a simple behavioral assay to compare responses to ethanol in Drosophila melanogaster , which lacks CB1/CB2 genes but has orthologs for non-canonical targets. Flies fed with a CBD-enriched diet retain baseline ethanol sensitivity but fail to develop rapid functional tolerance to ethanol. These findings support using Drosophila as a model to study non-canonical CBD signaling in ethanol behaviors relevant to the development of alcohol use disorder.
{"title":"Long term exposure to dietary cannabinoids inhibits rapid functional tolerance to ethanol in <i>Drosophila melanogaster</i> adults.","authors":"Alyssa Vidal, Sandra Illescas, Vivian Le, Nathan Feldhorn, Sarah Khan, Mariano Loza-Coll","doi":"10.17912/micropub.biology.001825","DOIUrl":"10.17912/micropub.biology.001825","url":null,"abstract":"<p><p>In rodents, exposure to cannabidiol (CBD) was shown to alter responses to alcohol, primarily via CB1/CB2 signaling. However, CBD also targets non-canonical receptors whose potential roles in modulating CBD-alcohol interactions remain unknown. We used a simple behavioral assay to compare responses to ethanol in <i>Drosophila melanogaster</i> , which lacks CB1/CB2 genes but has orthologs for non-canonical targets. Flies fed with a CBD-enriched diet retain baseline ethanol sensitivity but fail to develop rapid functional tolerance to ethanol. These findings support using <i>Drosophila</i> as a model to study non-canonical CBD signaling in ethanol behaviors relevant to the development of alcohol use disorder.</p>","PeriodicalId":74192,"journal":{"name":"microPublication biology","volume":"2025 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-12-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12741748/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145851618","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-09eCollection Date: 2025-01-01DOI: 10.17912/micropub.biology.001782
Michaela Liegertová, Monika Iljučoková, Jiří Smejkal, Jan Malý, Michaela Kocholatá
Cross-kingdom trafficking of extracellular vesicles (EVs) is documented between plants and fungal pathogens, yet evidence for plant-herbivore exchange remains scarce. Here we show that EVs isolated from Nicotiana tabacum suspension cultures show fluorescence consistent with uptake by the pedal epithelial cells of the herbivorous slug Arion vulgaris within 30 min ex vivo. Fluorescently labeled EVs appeared as discrete intracellular puncta enriched in glandular ridges; unlabeled EVs and final-wash controls showed no detectable fluorescence under identical imaging settings. These observations suggest that plant EVs can cross the mucus barrier of a molluscan herbivore, enabling plant-to-slug molecular communication.
{"title":"<i>Arion vulgaris</i> pedal epithelium displays fluorescence patterns consistent with uptake of <i>Nicotiana tabacum</i> extracellular dye-labeled vesicles <i>ex vivo</i>.","authors":"Michaela Liegertová, Monika Iljučoková, Jiří Smejkal, Jan Malý, Michaela Kocholatá","doi":"10.17912/micropub.biology.001782","DOIUrl":"10.17912/micropub.biology.001782","url":null,"abstract":"<p><p>Cross-kingdom trafficking of extracellular vesicles (EVs) is documented between plants and fungal pathogens, yet evidence for plant-herbivore exchange remains scarce. Here we show that EVs isolated from <i>Nicotiana tabacum</i> suspension cultures show fluorescence consistent with uptake by the pedal epithelial cells of the herbivorous slug <i>Arion vulgaris</i> within 30 min ex vivo. Fluorescently labeled EVs appeared as discrete intracellular puncta enriched in glandular ridges; unlabeled EVs and final-wash controls showed no detectable fluorescence under identical imaging settings. These observations suggest that plant EVs can cross the mucus barrier of a molluscan herbivore, enabling plant-to-slug molecular communication.</p>","PeriodicalId":74192,"journal":{"name":"microPublication biology","volume":"2025 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12728586/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145835432","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-09eCollection Date: 2025-01-01DOI: 10.17912/micropub.biology.001799
Zakary Kubitz, Jonathan Goedken, Brylee O'Neill, Luke DeWaard, Jack Kinzer, Josette Knutson, Avery Mize, Stephanie Toering Peters
Seizures have a bidirectional relationship to sleep deprivation; sleep loss increases seizure susceptibility and duration, while seizures disrupt sleep (Mituzaite et al., 2021; Konduru et al., 2021). This study tested whether two treatments, cannabidiol (CBD) and Zizyphus jujube extract, reduced seizure activity in Drosophila melanogaster . We hypothesized the treatments would decrease seizure duration and increase seizure latency in sleep-deprived bang-sensitive ( sesB 9Ed-4 ) and temperature-sensitive ( sei P ) mutants, respectively. Sleep-deprived sesB 9Ed-4 flies treated with Z. jujube showed reduced seizure duration and both treatments increased seizure latency in sleep-deprived sei P flies. This demonstrates CBD and Z. jujube have anti-convulsant activity in the Drosophila model.
癫痫发作与睡眠剥夺有双向关系;睡眠不足会增加癫痫发作的易感性和持续时间,而癫痫发作会扰乱睡眠(Mituzaite et al., 2021; Konduru et al., 2021)。本研究测试了大麻二酚(CBD)和酸枣提取物两种治疗方法是否能降低黑腹果蝇的癫痫发作活动。我们假设这些治疗会减少睡眠剥夺的bang-sensitive (sesB 9Ed-4)和temperature-sensitive (sei P)突变体的癫痫发作持续时间和增加癫痫发作潜伏期。在睡眠不足的sesB 9Ed-4果蝇中,用枣子治疗的sesB 9Ed-4果蝇的癫痫发作持续时间缩短,两种治疗方法都增加了睡眠不足的sesB 9Ed-4果蝇的癫痫发作潜伏期。这表明CBD和大枣在果蝇模型中具有抗惊厥活性。
{"title":"Seizure Susceptibility in <i>Drosophila melanogaster</i> is Reduced with CBD and <i>Z. jujube</i> treatment.","authors":"Zakary Kubitz, Jonathan Goedken, Brylee O'Neill, Luke DeWaard, Jack Kinzer, Josette Knutson, Avery Mize, Stephanie Toering Peters","doi":"10.17912/micropub.biology.001799","DOIUrl":"10.17912/micropub.biology.001799","url":null,"abstract":"<p><p>Seizures have a bidirectional relationship to sleep deprivation; sleep loss increases seizure susceptibility and duration, while seizures disrupt sleep (Mituzaite et al., 2021; Konduru et al., 2021). This study tested whether two treatments, cannabidiol (CBD) and <i>Zizyphus jujube</i> extract, reduced seizure activity in <i>Drosophila melanogaster</i> . We hypothesized the treatments would decrease seizure duration and increase seizure latency in sleep-deprived bang-sensitive ( <i>sesB <sup>9Ed-4</sup></i> ) and temperature-sensitive ( <i>sei <sup>P</sup></i> ) mutants, respectively. Sleep-deprived <i>sesB <sup>9Ed-4</sup></i> flies treated with <i>Z. jujube</i> showed reduced seizure duration and both treatments increased seizure latency in sleep-deprived <i>sei <sup>P</sup></i> flies. This demonstrates CBD and <i>Z. jujube</i> have anti-convulsant activity in the <i>Drosophila</i> model.</p>","PeriodicalId":74192,"journal":{"name":"microPublication biology","volume":"2025 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12728587/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145835472","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-08eCollection Date: 2025-01-01DOI: 10.17912/micropub.biology.001805
Francisco J Moro, M Victoria Vallejos, Gina Cervesato, Ernestina Miniussi, Nicolás Cantero, Marilina Gaffuri, Milagros García, Zoe Clementino, Malena Quadri, Francisco Lamagni, Tulio Pianesi, Hugo Gramajo, Laura Buttigliero, Corina M Fusari, Martín Espariz, María Alejandra Mussi, Lautaro Diacovich
In this paper, we report the discovery and characterization of Byron23, a bacteriophage isolated from a soil sample collected approximately 30 cm beneath the surface of a stream bank in Rosario, Santa Fe, Argentina. Byron23 infected the host Microbacterium foliorum NRRL B-24224 resulting in clear, round plaques surrounded by a turbid edge. Transmission electron microscopy revealed that Byron23 exhibits siphoviral morphology. Genome sequencing using the Illumina platform revealed a 41,821 bp genome encoding 64 predicted genes. The bacteriophage was classified within the subcluster EA1 and is predicted to be a lytic phage.
{"title":"Complete genome sequence of bacteriophage Byron23 targeting <i>Microbacterium foliorum</i>.","authors":"Francisco J Moro, M Victoria Vallejos, Gina Cervesato, Ernestina Miniussi, Nicolás Cantero, Marilina Gaffuri, Milagros García, Zoe Clementino, Malena Quadri, Francisco Lamagni, Tulio Pianesi, Hugo Gramajo, Laura Buttigliero, Corina M Fusari, Martín Espariz, María Alejandra Mussi, Lautaro Diacovich","doi":"10.17912/micropub.biology.001805","DOIUrl":"10.17912/micropub.biology.001805","url":null,"abstract":"<p><p>In this paper, we report the discovery and characterization of Byron23, a bacteriophage isolated from a soil sample collected approximately 30 cm beneath the surface of a stream bank in Rosario, Santa Fe, Argentina. Byron23 infected the host <i>Microbacterium foliorum</i> NRRL B-24224 resulting in clear, round plaques surrounded by a turbid edge. Transmission electron microscopy revealed that Byron23 exhibits siphoviral morphology. Genome sequencing using the Illumina platform revealed a 41,821 bp genome encoding 64 predicted genes. The bacteriophage was classified within the subcluster EA1 and is predicted to be a lytic phage.</p>","PeriodicalId":74192,"journal":{"name":"microPublication biology","volume":"2025 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12723522/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145829254","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-08eCollection Date: 2025-01-01DOI: 10.17912/micropub.biology.001879
Jazmine Aftabi, Shivani Gangireddy, Uttej Kollu, Charlie Lu, Calista K Ly, Luke A Metcalf, Eshaan Patnaik, Dhruv Reddy, Jacob Taylor, Harry Teng, William Turula, Nalani M Wooton, Annie Zhou, Nancy E Castro
Bacteriophage Ichiang is a siphovirus capable of infecting Arthrobacter globiformis B2979. The genome has a length of 41,984 base pairs with 64.8 % GC content and contains 64 predicted protein-coding genes and 1 tRNA gene. Based on gene content, Ichiang has been assigned to Actinobacteriophage FF cluster.
{"title":"Genome Sequence of <i>Arthrobacter globiformis</i> B-2979 phage Ichiang.","authors":"Jazmine Aftabi, Shivani Gangireddy, Uttej Kollu, Charlie Lu, Calista K Ly, Luke A Metcalf, Eshaan Patnaik, Dhruv Reddy, Jacob Taylor, Harry Teng, William Turula, Nalani M Wooton, Annie Zhou, Nancy E Castro","doi":"10.17912/micropub.biology.001879","DOIUrl":"10.17912/micropub.biology.001879","url":null,"abstract":"<p><p>Bacteriophage Ichiang is a siphovirus capable of infecting <i>Arthrobacter globiformis</i> B2979. The genome has a length of 41,984 base pairs with 64.8 % GC content and contains 64 predicted protein-coding genes and 1 tRNA gene. Based on gene content, Ichiang has been assigned to Actinobacteriophage FF cluster.</p>","PeriodicalId":74192,"journal":{"name":"microPublication biology","volume":"2025 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12723519/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145829240","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Some organisms can regrow severed body parts. In vertebrates, the anabolic pentose phosphate pathway (PPP) aids regeneration, but we do not know if invertebrates require the PPP for regeneration. To test this, we attempted to inhibit the PPP rate limiting enzyme, glucose-6-phosphate dehydrogenase (G6PD), with the steroid dehydroepiandrosterone (DHEA), using the regenerative annelid Lumbriculus variegatus as our model organism. DHEA inhibited Lumbriculus regeneration, a result also observed in tadpole tails, which may suggest conserved regenerative mechanisms in vertebrates and invertebrates. Notably, we did not observe G6PD inhibition with DHEA treatment, suggesting that DHEA may be working through a G6PD-independent mechanism. .
{"title":"DHEA inhibits regeneration in <i>Lumbriculus variegatus</i>.","authors":"Erin Frank, Iris Pardue, Ifti Rahman, Emily Banthin, Kathy Gillen","doi":"10.17912/micropub.biology.001898","DOIUrl":"10.17912/micropub.biology.001898","url":null,"abstract":"<p><p>Some organisms can regrow severed body parts. In vertebrates, the anabolic pentose phosphate pathway (PPP) aids regeneration, but we do not know if invertebrates require the PPP for regeneration. To test this, we attempted to inhibit the PPP rate limiting enzyme, glucose-6-phosphate dehydrogenase (G6PD), with the steroid dehydroepiandrosterone (DHEA), using the regenerative annelid <i>Lumbriculus variegatus</i> as our model organism. DHEA inhibited <i>Lumbriculus</i> regeneration, a result also observed in tadpole tails, which may suggest conserved regenerative mechanisms in vertebrates and invertebrates. Notably, we did not observe G6PD inhibition with DHEA treatment, suggesting that DHEA may be working through a G6PD-independent mechanism. .</p>","PeriodicalId":74192,"journal":{"name":"microPublication biology","volume":"2025 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12723521/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145829263","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-08eCollection Date: 2025-01-01DOI: 10.17912/micropub.biology.001854
Rachel Harris, Ishaan Prasad, Sarah E Weaver, Amer Abdulrab, Ava A Abernathy, Amanda Ackerman, Aaron Acosta, Alexis Aguirre, Hasan Al Wakeel, Faize Alachkar, Salette Alfaro, Baylee Allen, Amar'e Anderson, Alexis Araiza, Kayla Arroyo, Kanza Arshad, Selby Artis, Merna W Baqa, Hannah E Bauer, Peyton L Beduhn, Grant Boylan, Vrinda Brahmbhatt, Matthew Brock, Riley Bryant, Catherine Byrne, Reyna Carreno, Alimamy Conteh, Kennedy Cox, Emily M Daniel, Mahamad Drammeh, Briseida Espino, Nathan Farmer, Audrey Fields, Rosalinda Flores Santizo, Sema Gisele, Maria Isabella Goolsby, Efua A Grant, Xavier Graves, Gabriella Greenlaw, Lea Guelde, Jeremiah Hall, Jeremy Hall, Zackary Harris, Spelman M Henry, Mark Hensley, Kenyon Hurd, Malcolm Jolley, Emily A Kalaj, Aleena Kallan, Ravneet Kaur, Chancellor Key, Makenzie Klesch, Paige Kocher, Aspen Long, Miguel Lopez, Jason J Lucas Ii, Ji X Luth, Stacey D Marcinkowski, Guadalupe Martinez, Kitzia Martinez, Caniya McCray-Brown, Lillian McDermott, Meghan McVay, Seth Middleton, Aziz Milla, Jabari Mobley, Ryan L Moore, Izaiah Morris, Michael Anthony Newman, Ikenna C Nwoke, Angel Perez, Kieli D Phillips, Mikaela Ramirez, Erika Ramos, Ali Reda, Coriss Redmond, Madeline Rentchler, Ross S Rider, Aiden Roschi, Suhana A Rouf, Landon Scott, Krishna Shah, Connor E Shin, Lincoln Smith, Albis Spahiu, Justin St Cloud, Imhotep Truitt, Christian Tucker, Kathryn E Tyler, Zachary Underwood, Colin Vaughn, Lainey Vazquez, Meredith Weiss, Javaun Whitehead, Amare Williams, Faith Williams, Marissa N Pezdek, Hemin P Shah, Olivier Devergne, Alexandra Peister, Joyce Stamm, Jacob D Kagey, Julie A Merkle
As part of the Fly-CURE consortium, a mutant allele of Apoptosis inducing factor ( AIF ) was characterized using complementation mapping, genomic sequencing, and mosaic phenotypic analysis to investigate its role in cell growth control in Drosophila melanogaster . The AIF e04281 mutation dramatically reduced homozygous mutant clone size and caused morphological defects in genetically mosaic eyes. Sequencing confirmed a transposon insertion that truncates the AIF protein preceding conserved domains essential for mitochondrial function and apoptosis. The observed clone loss indicates a cell-autonomous requirement for AIF and supports the use of AIF e04281 as a loss-of-function background for genetic modifier screens on chromosome arm 2L.
{"title":"Genetic Mapping and Phenotypic Characterization of the <i>Drosophila</i> <i>AIF <sup>e04281</sup></i> Allele Reveals Mutant Clone Loss in Mosaic Eyes.","authors":"Rachel Harris, Ishaan Prasad, Sarah E Weaver, Amer Abdulrab, Ava A Abernathy, Amanda Ackerman, Aaron Acosta, Alexis Aguirre, Hasan Al Wakeel, Faize Alachkar, Salette Alfaro, Baylee Allen, Amar'e Anderson, Alexis Araiza, Kayla Arroyo, Kanza Arshad, Selby Artis, Merna W Baqa, Hannah E Bauer, Peyton L Beduhn, Grant Boylan, Vrinda Brahmbhatt, Matthew Brock, Riley Bryant, Catherine Byrne, Reyna Carreno, Alimamy Conteh, Kennedy Cox, Emily M Daniel, Mahamad Drammeh, Briseida Espino, Nathan Farmer, Audrey Fields, Rosalinda Flores Santizo, Sema Gisele, Maria Isabella Goolsby, Efua A Grant, Xavier Graves, Gabriella Greenlaw, Lea Guelde, Jeremiah Hall, Jeremy Hall, Zackary Harris, Spelman M Henry, Mark Hensley, Kenyon Hurd, Malcolm Jolley, Emily A Kalaj, Aleena Kallan, Ravneet Kaur, Chancellor Key, Makenzie Klesch, Paige Kocher, Aspen Long, Miguel Lopez, Jason J Lucas Ii, Ji X Luth, Stacey D Marcinkowski, Guadalupe Martinez, Kitzia Martinez, Caniya McCray-Brown, Lillian McDermott, Meghan McVay, Seth Middleton, Aziz Milla, Jabari Mobley, Ryan L Moore, Izaiah Morris, Michael Anthony Newman, Ikenna C Nwoke, Angel Perez, Kieli D Phillips, Mikaela Ramirez, Erika Ramos, Ali Reda, Coriss Redmond, Madeline Rentchler, Ross S Rider, Aiden Roschi, Suhana A Rouf, Landon Scott, Krishna Shah, Connor E Shin, Lincoln Smith, Albis Spahiu, Justin St Cloud, Imhotep Truitt, Christian Tucker, Kathryn E Tyler, Zachary Underwood, Colin Vaughn, Lainey Vazquez, Meredith Weiss, Javaun Whitehead, Amare Williams, Faith Williams, Marissa N Pezdek, Hemin P Shah, Olivier Devergne, Alexandra Peister, Joyce Stamm, Jacob D Kagey, Julie A Merkle","doi":"10.17912/micropub.biology.001854","DOIUrl":"10.17912/micropub.biology.001854","url":null,"abstract":"<p><p>As part of the Fly-CURE consortium, a mutant allele of <i>Apoptosis inducing factor</i> ( <i>AIF</i> ) was characterized using complementation mapping, genomic sequencing, and mosaic phenotypic analysis to investigate its role in cell growth control in <i>Drosophila melanogaster</i> . The <i>AIF <sup>e04281</sup></i> mutation dramatically reduced homozygous mutant clone size and caused morphological defects in genetically mosaic eyes. Sequencing confirmed a transposon insertion that truncates the AIF protein preceding conserved domains essential for mitochondrial function and apoptosis. The observed clone loss indicates a cell-autonomous requirement for <i>AIF</i> and supports the use of <i>AIF <sup>e04281</sup></i> as a loss-of-function background for genetic modifier screens on chromosome arm 2L.</p>","PeriodicalId":74192,"journal":{"name":"microPublication biology","volume":"2025 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12720165/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145822285","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Transgenic regulators and reporter controls such as GAL80 and RNA interference (RNAi) constructs targeting fluorescent proteins are invaluable tools in Drosophila research. During experiments designed to temporally regulate gene expression, we observed unexpected flight defects in aged flies with constitutive expression of temperature-sensitive GAL80 TS . Furthermore, ubiquitous expression of RNAi targeting EGFP or mCherry induced survival and motor impairments, even in the absence of corresponding fluorescent reporters. These findings suggest that genetic tools commonly assumed to be physiologically inert can have measurable effects on motor behaviour. Researchers employing these tools should therefore interpret behavioural data with caution and include appropriate controls.
{"title":"Toxic effects of GAL80 and RNAi against fluorescent proteins on motor performance in <i>Drosophila</i>.","authors":"Kathryn Mizzi, Francesca Grech, Sylvana Tabone, Rebecca Cacciottolo, Ruben J Cauchi","doi":"10.17912/micropub.biology.001943","DOIUrl":"10.17912/micropub.biology.001943","url":null,"abstract":"<p><p>Transgenic regulators and reporter controls such as GAL80 and RNA interference (RNAi) constructs targeting fluorescent proteins are invaluable tools in <i>Drosophila</i> research. During experiments designed to temporally regulate gene expression, we observed unexpected flight defects in aged flies with constitutive expression of temperature-sensitive GAL80 <sup>TS</sup> . Furthermore, ubiquitous expression of RNAi targeting EGFP or mCherry induced survival and motor impairments, even in the absence of corresponding fluorescent reporters. These findings suggest that genetic tools commonly assumed to be physiologically inert can have measurable effects on motor behaviour. Researchers employing these tools should therefore interpret behavioural data with caution and include appropriate controls.</p>","PeriodicalId":74192,"journal":{"name":"microPublication biology","volume":"2025 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12717532/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145806656","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-04eCollection Date: 2025-01-01DOI: 10.17912/micropub.biology.001946
Savannah E Sojka, Fletcher M Hammond, Denise M Ferkey
Cyclic nucleotides (cAMP, cGMP) are critical second messengers that transduce diverse signaling events within cells, ranging from developmental processes and neuronal signaling to roles in cellular growth (Fajardo et al., 2014; Galande & Cote, 2025; Levy et al., 2011). Thus, the regulation of cyclic nucleotide levels is critical for the regulation of signal transduction pathways and cellular homeostasis. We previously reported a role for cGMP in the negative regulation of bitter taste avoidance in C. elegans (Chaubey et al., 2023; Krzyzanowski et al., 2013; Krzyzanowski et al., 2016). Phosphodiesterases (PDEs) are a class of enzymes that break down cyclic nucleotides, and we show here that multiple PDEs likely work together to modulate C. elegans bitter taste sensitivity.
环核苷酸(cAMP, cGMP)是细胞内转导多种信号事件的关键第二信使,从发育过程和神经元信号传导到细胞生长中的作用(Fajardo等,2014;Galande & Cote, 2025; Levy等,2011)。因此,环核苷酸水平的调节对于信号转导途径和细胞稳态的调节至关重要。我们之前报道了cGMP在秀丽隐杆线虫苦味回避的负调控中的作用(Chaubey et al., 2023; Krzyzanowski et al., 2013;Krzyzanowski等人,2016).磷酸二酯酶(PDEs)是一类分解环核苷酸的酶,我们在这里表明多个PDEs可能共同调节秀丽隐杆线虫的苦味敏感性。
{"title":"Phosphodiesterases Regulate <i>C. elegans</i> Bitter Taste Avoidance.","authors":"Savannah E Sojka, Fletcher M Hammond, Denise M Ferkey","doi":"10.17912/micropub.biology.001946","DOIUrl":"10.17912/micropub.biology.001946","url":null,"abstract":"<p><p>Cyclic nucleotides (cAMP, cGMP) are critical second messengers that transduce diverse signaling events within cells, ranging from developmental processes and neuronal signaling to roles in cellular growth (Fajardo et al., 2014; Galande & Cote, 2025; Levy et al., 2011). Thus, the regulation of cyclic nucleotide levels is critical for the regulation of signal transduction pathways and cellular homeostasis. We previously reported a role for cGMP in the negative regulation of bitter taste avoidance in <i>C. elegans</i> (Chaubey et al., 2023; Krzyzanowski et al., 2013; Krzyzanowski et al., 2016). Phosphodiesterases (PDEs) are a class of enzymes that break down cyclic nucleotides, and we show here that multiple PDEs likely work together to modulate <i>C. elegans</i> bitter taste sensitivity.</p>","PeriodicalId":74192,"journal":{"name":"microPublication biology","volume":"2025 ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2025-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12715615/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145806632","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}