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Naïve Bayes is an interpretable and predictive machine learning algorithm in predicting osteoporotic hip fracture in-hospital mortality compared to other machine learning algorithms. Naïve与其他机器学习算法相比,贝叶斯在预测骨质疏松性髋部骨折住院死亡率方面是一种可解释和可预测的机器学习算法。
Pub Date : 2025-01-02 eCollection Date: 2025-01-01 DOI: 10.1371/journal.pdig.0000529
Jo-Wai Douglas Wang

Osteoporotic hip fractures (HFs) in the elderly are a pertinent issue in healthcare, particularly in developed countries such as Australia. Estimating prognosis following admission remains a key challenge. Current predictive tools require numerous patient input features including those unavailable early in admission. Moreover, attempts to explain machine learning [ML]-based predictions are lacking. Seven ML prognostication models were developed to predict in-hospital mortality following minimal trauma HF in those aged ≥ 65 years of age, requiring only sociodemographic and comorbidity data as input. Hyperparameter tuning was performed via fractional factorial design of experiments combined with grid search; models were evaluated with 5-fold cross-validation and area under the receiver operating characteristic curve (AUROC). For explainability, ML models were directly interpreted as well as analysed with SHAP values. Top performing models were random forests, naïve Bayes [NB], extreme gradient boosting, and logistic regression (AUROCs ranging 0.682-0.696, p>0.05). Interpretation of models found the most important features were chronic kidney disease, cardiovascular comorbidities and markers of bone metabolism; NB also offers direct intuitive interpretation. Overall, NB has much potential as an algorithm, due to its simplicity and interpretability whilst maintaining competitive predictive performance.

老年人骨质疏松性髋部骨折(HFs)是医疗保健中的一个相关问题,特别是在澳大利亚等发达国家。估计入院后的预后仍然是一个关键的挑战。目前的预测工具需要大量的患者输入功能,包括入院早期无法获得的功能。此外,还缺乏解释基于机器学习的预测的尝试。开发了7个ML预测模型,用于预测年龄≥65岁的最小创伤性心衰患者的住院死亡率,仅需要社会人口统计学和合并症数据作为输入。通过实验的分数因子设计结合网格搜索进行超参数调整;采用5倍交叉验证和受试者工作特征曲线下面积(AUROC)对模型进行评价。为了可解释性,ML模型被直接解释并使用SHAP值进行分析。表现最好的模型是随机森林、naïve贝叶斯[NB]、极端梯度增强和逻辑回归(auroc范围为0.682-0.696,p < 0.05)。对模型的解释发现,最重要的特征是慢性肾脏疾病、心血管合并症和骨代谢标志物;NB还提供直接直观的解释。总的来说,NB作为一种算法有很大的潜力,因为它的简单性和可解释性,同时保持了有竞争力的预测性能。
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引用次数: 0
Automated craniofacial biometry with 3D T2w fetal MRI. 自动颅面生物测量与3D T2w胎儿MRI。
Pub Date : 2024-12-30 eCollection Date: 2024-12-01 DOI: 10.1371/journal.pdig.0000663
Jacqueline Matthew, Alena Uus, Alexia Egloff Collado, Aysha Luis, Sophie Arulkumaran, Abi Fukami-Gartner, Vanessa Kyriakopoulou, Daniel Cromb, Robert Wright, Kathleen Colford, Maria Deprez, Jana Hutter, Jonathan O'Muircheartaigh, Christina Malamateniou, Reza Razavi, Lisa Story, Joseph V Hajnal, Mary A Rutherford

Objectives: Evaluating craniofacial phenotype-genotype correlations prenatally is increasingly important; however, it is subjective and challenging with 3D ultrasound. We developed an automated label propagation pipeline using 3D motion- corrected, slice-to-volume reconstructed (SVR) fetal MRI for craniofacial measurements.

Methods: A literature review and expert consensus identified 31 craniofacial biometrics for fetal MRI. An MRI atlas with defined anatomical landmarks served as a template for subject registration, auto-labelling, and biometric calculation. We assessed 108 healthy controls and 24 fetuses with Down syndrome (T21) in the third trimester (29-36 weeks gestational age, GA) to identify meaningful biometrics in T21. Reliability and reproducibility were evaluated in 10 random datasets by four observers.

Results: Automated labels were produced for all 132 subjects with a 0.3% placement error rate. Seven measurements, including anterior base of skull length and maxillary length, showed significant differences with large effect sizes between T21 and control groups (ANOVA, p<0.001). Manual measurements took 25-35 minutes per case, while automated extraction took approximately 5 minutes. Bland-Altman plots showed agreement within manual observer ranges except for mandibular width, which had higher variability. Extended GA growth charts (19-39 weeks), based on 280 control fetuses, were produced for future research.

Conclusion: This is the first automated atlas-based protocol using 3D SVR MRI for fetal craniofacial biometrics, accurately revealing morphological craniofacial differences in a T21 cohort. Future work should focus on improving measurement reliability, larger clinical cohorts, and technical advancements, to enhance prenatal care and phenotypic characterisation.

目的:产前评估颅面表型与基因型的相关性越来越重要;然而,它是主观的和具有挑战性的3D超声。我们开发了一种自动标签传播管道,使用3D运动校正,切片-体积重建(SVR)胎儿MRI进行颅面测量。方法:通过文献回顾和专家共识,确定31个颅面生物特征用于胎儿MRI。具有明确解剖标志的MRI图谱作为受试者注册、自动标记和生物识别计算的模板。我们评估了108名健康对照和24名妊娠晚期(29-36周胎龄,GA)的唐氏综合征胎儿(T21),以确定T21中有意义的生物特征。由4名观察员在10个随机数据集中评估可靠性和可重复性。结果:所有132名受试者均生成了自动标签,放置错误率为0.3%。包括前颅底长度和上颌长度在内的7项测量结果显示,T21组与对照组之间存在显著差异,且具有较大的效应量(ANOVA, p)。结论:这是首个使用3D SVR MRI进行胎儿颅面生物识别的基于自动图谱的方案,准确地揭示了T21队列中颅面形态差异。未来的工作应侧重于提高测量的可靠性,更大的临床队列和技术进步,以加强产前护理和表型特征。
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引用次数: 0
Development and evaluation of a low-cost database solution for the Community Paramedicine at Clinic (CP@clinic) database. 为诊所社区医疗辅助服务(CP@clinic)数据库开发和评估一个低成本的数据库解决方案。
Pub Date : 2024-12-27 eCollection Date: 2024-12-01 DOI: 10.1371/journal.pdig.0000689
Ricardo Angeles, Krzysztof Adamczyk, Francine Marzanek, Melissa Pirrie, Mikayla Plishka, Gina Agarwal

The Community Paramedicine at Clinic (CP@clinic) program is a community program that utilizes community paramedics to support older adults in assessing their risk factors, managing their chronic conditions, and linking them to community resources. The aim of this project is to design a low-cost, portable, secure, user-friendly database for CP@clinic sessions and pilot test the database with paramedics and older adult volunteers. The CP@clinic program database using the Microsoft Access software was first developed through consultation with the CP@clinic research team. Next, the database was pilot tested with two sets of older adults and one set of paramedics to assess user experience. Volunteers completed a survey regarding their perceptions of the level of difficulty when using the database. A computer-based database was the best option as it provided flexibility while reducing costs. The final database should perform calculations and summarize risk assessment data, provide recommended resources, generate automated reports, capture changes in medical and medication history, and ensure that the sensitive information is secure. During pilot testing, the older adult participants and the paramedics indicated that the database was easy to use. This low-cost, user-friendly and secure database captures initial and follow-up data, incorporates algorithms that guide the paramedics, and calculates risk factor scores for the participants. This solution to a healthcare database is translatable to other health research studies in which ongoing patient data is collected electronically and longitudinally.

诊所社区医疗护理人员(CP@clinic)项目是一个社区项目,利用社区护理人员帮助老年人评估他们的风险因素,管理他们的慢性病,并将他们与社区资源联系起来。该项目的目的是为CP@clinic会议设计一个低成本、便携、安全、用户友好的数据库,并由护理人员和老年志愿者对该数据库进行试点测试。利用微软Access软件开发的CP@clinic程序数据库是与CP@clinic研究组协商后开发的。接下来,对数据库进行了两组老年人和一组护理人员的试点测试,以评估用户体验。志愿者们完成了一项关于他们在使用数据库时对难度程度的看法的调查。以计算机为基础的数据库是最好的选择,因为它提供了灵活性,同时降低了成本。最终数据库应执行计算和汇总风险评估数据,提供推荐资源,生成自动报告,捕获医疗和用药历史中的变化,并确保敏感信息的安全。在试点测试中,老年参与者和护理人员表示该数据库易于使用。这种低成本、用户友好且安全的数据库可捕获初始和后续数据,结合指导护理人员的算法,并为参与者计算风险因素得分。这种医疗保健数据库的解决方案可翻译为其他健康研究,其中以电子方式和纵向收集正在进行的患者数据。
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引用次数: 0
Multicenter comparative analysis of local and aggregated data training strategies in COVID-19 outcome prediction with Machine learning. 机器学习在COVID-19结局预测中的局部和聚合数据训练策略的多中心比较分析
Pub Date : 2024-12-26 eCollection Date: 2024-12-01 DOI: 10.1371/journal.pdig.0000699
Carine Savalli, Roberta Moreira Wichmann, Fabiano Barcellos Filho, Fernando Timoteo Fernandes, Alexandre Dias Porto Chiavegatto Filho

Machine learning (ML) is a promising tool in assisting clinical decision-making for improving diagnosis and prognosis, especially in developing regions. It is often used with large samples, aggregating data from different regions and hospitals. However, it is unclear how this affects predictions in local centers. This study aims to compare data aggregation strategies of several hospitals in Brazil with a local training strategy in each hospital to predict two COVID-19 outcomes: Intensive Care Unit admission (ICU) and mechanical ventilation use (MV). The study included 6,046 patients from 14 hospitals, with local sample sizes ranging from 47 to 1500 patients. Machine learning models were trained using extreme gradient boosting, lightGBM, and catboost for structured data. Seven data aggregation strategies based on hospital geographic regions were compared with local training, and the best strategy was determined by analyzing the area under the ROC curve (AUROC). SHAP (Shapley Additive exPlanations) values were used to assess the contribution of variables to predictions. Additionally, a metafeatures analysis examined how hospital characteristics influence the selection of the best strategy. The study found that the local training strategy was the most effective approach, in the case of ICU outcomes, for 11 of the 14 hospitals (79%), and, in the case of MV, for 10 hospitals (71%). Metafeatures analysis suggested that hospitals with smaller sample sizes generally performed better using an aggregated data strategy compared to local training. Our study brings to light an important concern about the impact of grouping data from different hospitals in predictive machine learning models. These findings contribute to the ongoing debate about the trade-off between increasing sample size and bringing together heterogeneous scenarios.

机器学习(ML)在帮助临床决策以改善诊断和预后方面是一个很有前途的工具,特别是在发展中地区。它通常用于大样本,汇总来自不同地区和医院的数据。然而,目前尚不清楚这将如何影响当地中心的预测。本研究旨在将巴西几家医院的数据汇总策略与每家医院的当地培训策略进行比较,以预测两种COVID-19结果:重症监护病房入住(ICU)和机械通气使用(MV)。该研究包括来自14家医院的6046名患者,当地样本量从47名到1500名不等。机器学习模型使用极端梯度增强、lightGBM和catboost对结构化数据进行训练。将7种基于医院地理区域的数据聚合策略与局部训练进行比较,并通过分析ROC曲线下面积(AUROC)确定最佳策略。SHAP (Shapley Additive explanatory)值用于评估变量对预测的贡献。此外,一项元特征分析检验了医院特征如何影响最佳策略的选择。研究发现,在ICU结果方面,14家医院中的11家(79%)采用本地培训策略是最有效的方法,而在MV方面,10家医院(71%)采用本地培训策略。元特征分析表明,与本地培训相比,样本量较小的医院通常在使用汇总数据策略时表现更好。我们的研究揭示了一个重要的问题,即来自不同医院的数据分组在预测机器学习模型中的影响。这些发现有助于在增加样本量和汇集异质情景之间进行权衡的持续辩论。
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引用次数: 0
A cluster randomized trial assessing the effect of a digital health algorithm on quality of care in Tanzania (DYNAMIC study). 一项评估坦桑尼亚数字健康算法对护理质量影响的聚类随机试验(DYNAMIC研究)。
Pub Date : 2024-12-23 eCollection Date: 2024-12-01 DOI: 10.1371/journal.pdig.0000694
Rainer Tan, Godfrey Kavishe, Alexandra V Kulinkina, Sabine Renggli, Lameck B Luwanda, Chacha Mangu, Geofrey Ashery, Margaret Jorram, Ibrahim Evans Mtebene, Peter Agrea, Humphrey Mhagama, Kristina Keitel, Marie-Annick Le Pogam, Nyanda Ntinginya, Honorati Masanja, Valérie D'Acremont

Digital clinical decision support tools have contributed to improved quality of care at primary care level health facilities. However, data from real-world randomized trials are lacking. We conducted a cluster randomized, open-label trial in Tanzania evaluating the use of a digital clinical decision support algorithm (CDSA), enhanced by point-of-care tests, training and mentorship, compared with usual care, among sick children 2 to 59 months old presenting to primary care facilities for an acute illness in Tanzania (ClinicalTrials.gov NCT05144763). The primary outcome was the mean proportion of 14 major Integrated Management of Childhood Illness (IMCI) symptoms and signs assessed by clinicians. Secondary outcomes included antibiotic prescription, counseling provided, and the appropriateness of antimalarial and antibiotic prescriptions. A total of 450 consultations were observed in 9 intervention and 9 control health facilities. The mean proportion of major symptoms and signs assessed in intervention health facilities was 46.4% (range 7.7% to 91.7%) compared to 26.3% (range 0% to 66.7%) in control health facilities, an adjusted difference of 15.1% (95% confidence interval [CI] 4.8% to 25.4%). Only weight, height, and pallor were assessed statistically more often when using the digital CDSA compared to controls. Observed antibiotic prescription was 37.3% in intervention facilities, and 76.4% in control facilities (adjusted risk ratio 0.5; 95% CI 0.4 to 0.7; p<0.001). Appropriate antibiotic prescription was 81.9% in intervention facilities and 51.4% in control facilities (adjusted risk ratio 1.5; 95% CI 1.2 to 1.8; p = 0.003). The implementation of a digital CDSA improved the mean proportion of IMCI symptoms and signs assessed in consultations with sick children, however most symptoms and signs were assessed infrequently. Nonetheless, antibiotics were prescribed less often, and more appropriately. Innovative approaches to overcome barriers related to clinicians' motivation and work environment are needed.

数字临床决策支持工具有助于提高初级保健一级卫生设施的护理质量。然而,缺乏现实世界随机试验的数据。我们在坦桑尼亚进行了一项集群随机、开放标签试验,评估了在坦桑尼亚因急性疾病到初级保健机构就诊的2至59个月大的患病儿童中,通过护理点测试、培训和指导,与常规护理相比,数字临床决策支持算法(CDSA)的使用情况(ClinicalTrials.gov NCT05144763)。主要结局是临床医生评估的14种主要儿童疾病综合管理(IMCI)症状和体征的平均比例。次要结局包括抗生素处方、提供的咨询以及抗疟药和抗生素处方的适宜性。在9个干预保健设施和9个对照保健设施共观察了450次咨询。干预卫生机构评估的主要症状和体征平均比例为46.4%(范围7.7%至91.7%),而对照卫生机构评估的主要症状和体征平均比例为26.3%(范围0%至66.7%),调整后差异为15.1%(95%可信区间[CI] 4.8%至25.4%)。与对照组相比,使用数字CDSA时,只有体重、身高和苍白被统计地评估得更多。观察到干预机构的抗生素处方率为37.3%,对照机构为76.4%(调整风险比0.5;95% CI 0.4 ~ 0.7;p
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引用次数: 0
Measurement of breast artery calcification using an artificial intelligence detection model and its association with major adverse cardiovascular events. 使用人工智能检测模型测量乳房动脉钙化及其与主要不良心血管事件的关联。
Pub Date : 2024-12-23 eCollection Date: 2024-12-01 DOI: 10.1371/journal.pdig.0000698
Suzanne J Rose, Josette Hartnett, Zachary J Estep, Daniyal Ameen, Shweta Karki, Edward Schuster, Rebecca B Newman, David H Hsi

Breast artery calcification (BAC) obtained from standard mammographic images is currently under evaluation to stratify risk of major adverse cardiovascular events in women. Measuring BAC using artificial intelligence (AI) technology, we aimed to determine the relationship between BAC and coronary artery calcification (CAC) severity with Major Adverse Cardiac Events (MACE). This retrospective study included women who underwent chest computed tomography (CT) within one year of mammography. T-test assessed the associations between MACE and variables of interest (BAC versus MACE, CAC versus MACE). Risk differences were calculated to capture the difference in observed risk and reference groups. Chi-square tests and/or Fisher's exact tests were performed to assess age and ASCVD risk with MACE and to assess BAC and CAC association with atherosclerotic cardiovascular disease (ASCVD) risk as a secondary outcome. A logistic regression model was conducted to measure the odds ratio between explanatory variables (BAC and CAC) and the outcome variables (MACE). Out of the 99 patients included in the analysis, 49 patients (49.49%) were BAC positive, with 37 patients (37.37%) CAC positive, and 26 patients (26.26%) had MACE. One unit increase in BAC score resulted in a 6% increased odds of having a moderate to high ASCVD risk >7.5% (p = 0.01) and 2% increased odds of having MACE (p = 0.005). The odds of having a moderate-high ASCVD risk score in BAC positive patients was higher (OR = 4.27, 95% CI 1.58-11.56) than CAC positive (OR = 4.05, 95% CI 1.36-12.06) patients. In this study population, the presence of BAC is associated with MACE and useful in corroborating ASCVD risk. Our results provide evidence to support the potential utilization of AI generated BAC measurements from standard of care mammograms in addition to the widely adopted ASCVD and CAC scores, to identify and risk-stratify women who are at increased risk of CVD and may benefit from targeted prevention measures.

目前正在评估从标准乳房x线摄影图像获得的乳腺动脉钙化(BAC),以对女性主要不良心血管事件的风险进行分层。使用人工智能(AI)技术测量BAC,我们旨在确定BAC与冠状动脉钙化(CAC)严重程度和主要不良心脏事件(MACE)之间的关系。这项回顾性研究包括在一年内接受胸部计算机断层扫描(CT)的妇女。t检验评估MACE与相关变量(BAC与MACE、CAC与MACE)之间的相关性。计算风险差异以捕捉观察到的风险组和参照组之间的差异。采用卡方检验和/或Fisher精确检验来评估MACE患者的年龄和ASCVD风险,并评估BAC和CAC与动脉粥样硬化性心血管疾病(ASCVD)风险作为次要结局的相关性。采用logistic回归模型测量解释变量(BAC和CAC)与结果变量(MACE)之间的比值比。纳入分析的99例患者中,49例(49.49%)BAC阳性,37例(37.37%)CAC阳性,26例(26.26%)MACE。BAC评分每增加一个单位,患ASCVD中度至高度风险的几率增加6%,至7.5% (p = 0.01),患MACE的几率增加2% (p = 0.005)。BAC阳性患者中-高ASCVD风险评分的几率(OR = 4.27, 95% CI 1.58-11.56)高于CAC阳性患者(OR = 4.05, 95% CI 1.36-12.06)。在本研究人群中,BAC的存在与MACE相关,有助于证实ASCVD风险。我们的研究结果提供了证据,支持人工智能生成的BAC测量的潜在应用,这些测量来自标准护理乳房x线照片,以及广泛采用的ASCVD和CAC评分,以识别和风险分层CVD风险增加的女性,并可能从有针对性的预防措施中受益。
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引用次数: 0
Does providing atrial fibrillation patients, after pulmonary vein isolation, with a 1-lead ECG device relieve the emergency department?-A historically controlled prospective trial. 为肺静脉隔离后的心房颤动患者提供单导联心电图仪是否能减轻急诊科的负担?
Pub Date : 2024-12-20 eCollection Date: 2024-12-01 DOI: 10.1371/journal.pdig.0000688
Jasper L Selder, Mark J Mulder, Willem R van de Vijver, Philip M Croon, Leontine E Wentrup, Stéphanie L van der Pas, Jos W R Twisk, Igor I Tulevski, Albert C Van Rossum, Cornelis P Allaart

Atrial fibrillation (AF) is a prevalent and clinically significant cardiac arrhythmia, with a growing incidence. The primary objectives in AF management are symptom relief, stroke risk reduction, and prevention of tachycardia-induced cardiomyopathy. Two key strategies for rhythm control include antiarrhythmic drug therapy and pulmonary vein isolation (PVI), with PVI being recommended for selected patients. Even though PVI is effective, post procedural health care utilization is high, contributing to emergency department (ED) overcrowding, which is a global healthcare concern. The use of remote rhythm diagnostics, such as a 1-lead ECG device (KM), may mitigate this issue by reducing ED visits and facilitating more plannable AF care.

Objective: This study aimed to assess whether providing AF patients with a 1-lead ECG device for 1 year after PVI would reduce ED utilization compared to standard care. Additionally, the study assessed whether this intervention would render AF care more plannable by reducing the incidence of unplanned cardioversions.

Methods: A historically controlled, prospective clinical trial was conducted. The intervention group were patients undergoing PVI for AF between September 2018 and August 2020, all patients in this group received a 1-lead ECG device for 1 year for remote rhythm monitoring. The historical control group were patients undergoing PVI between January 2016 and December 2017; these patients did not receive a 1-lead ECG device. Data on ED visits, planned and unplanned cardioversions, and outpatient contacts in the year after the PVI were collected for both groups.

Results: The study included 204 patients, 123 in the 1-lead ECG group and 81 in the standard care group. There was no statistically significant difference in the number of all-cause ED visits (63 vs 68 per 100 pts, respectively, p = 0.72), ED visits for possible rhythm disorders, or ED visits for definite rhythm disorders between the two groups. However, the 1-lead ECG group demonstrated a higher proportion of planned cardioversions compared to unplanned ones (odds ratio 4.9 [1.57-15.85], p = 0.007).

Conclusion: Providing patients with AF following PVI with a 1-lead ECG device did not result in a statistically significant reduction in ED visits during the first year. However, it did improve the management of recurrent AF episodes by substituting unplanned cardioversions with scheduled ones. Clinical Trials Registration Number NCT06283654.

心房颤动(AF)是一种普遍存在且具有临床意义的心律失常,发病率不断上升。房颤治疗的主要目的是缓解症状,降低卒中风险,预防心动过速引起的心肌病。心律控制的两个关键策略包括抗心律失常药物治疗和肺静脉隔离(PVI), PVI被推荐用于选定的患者。尽管PVI是有效的,但术后卫生保健的利用率很高,导致急诊科(ED)人满为患,这是一个全球性的卫生保健问题。远程心律诊断的使用,如1导联心电图设备(KM),可以通过减少急诊科就诊和促进更可计划的房颤护理来缓解这一问题。目的:本研究旨在评估与标准治疗相比,为房颤患者提供PVI后1年的1导联ECG设备是否会降低ED利用率。此外,该研究还评估了这种干预是否会通过减少计划外心律转复的发生率而使房颤治疗更具计划性。方法:采用历史对照前瞻性临床试验。干预组为2018年9月至2020年8月期间因房颤接受PVI治疗的患者,该组所有患者均接受1导联ECG设备1年的远程心律监测。历史对照组为2016年1月至2017年12月期间接受PVI的患者;这些患者没有接受1导联心电图装置。收集两组患者在PVI后一年内的急诊科就诊、计划内和计划外心脏复律以及门诊就诊数据。结果:共纳入204例患者,1导联心电图组123例,标准治疗组81例。两组患者的全因急诊科就诊次数(63 vs 68 / 100名患者,p = 0.72)、可能出现节律障碍的急诊科就诊次数或明确出现节律障碍的急诊科就诊次数均无统计学差异。然而,1导联心电图组计划心律转复的比例高于非计划心律转复组(优势比为4.9 [1.57-15.85],p = 0.007)。结论:为PVI后房颤患者提供1导联ECG设备并没有导致第一年ED就诊次数的统计学显著减少。然而,它确实通过用计划心律转复代替计划外心律转复改善了反复发作的房颤的管理。临床试验注册号NCT06283654。
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引用次数: 0
A voice-based algorithm can predict type 2 diabetes status in USA adults: Findings from the Colive Voice study. 基于语音的算法可以预测美国成年人的2型糖尿病状态:来自Colive Voice研究的发现。
Pub Date : 2024-12-19 eCollection Date: 2024-12-01 DOI: 10.1371/journal.pdig.0000679
Abir Elbéji, Mégane Pizzimenti, Gloria Aguayo, Aurélie Fischer, Hanin Ayadi, Franck Mauvais-Jarvis, Jean-Pierre Riveline, Vladimir Despotovic, Guy Fagherazzi

The pressing need to reduce undiagnosed type 2 diabetes (T2D) globally calls for innovative screening approaches. This study investigates the potential of using a voice-based algorithm to predict T2D status in adults, as the first step towards developing a non-invasive and scalable screening method. We analyzed pre-specified text recordings from 607 US participants from the Colive Voice study registered on ClinicalTrials.gov (NCT04848623). Using hybrid BYOL-S/CvT embeddings, we constructed gender-specific algorithms to predict T2D status, evaluated through cross-validation based on accuracy, specificity, sensitivity, and Area Under the Curve (AUC). The best models were stratified by key factors such as age, BMI, and hypertension, and compared to the American Diabetes Association (ADA) score for T2D risk assessment using Bland-Altman analysis. The voice-based algorithms demonstrated good predictive capacity (AUC = 75% for males, 71% for females), correctly predicting 71% of male and 66% of female T2D cases. Performance improved in females aged 60 years or older (AUC = 74%) and individuals with hypertension (AUC = 75%), with an overall agreement above 93% with the ADA risk score. Our findings suggest that voice-based algorithms could serve as a more accessible, cost-effective, and noninvasive screening tool for T2D. While these results are promising, further validation is needed, particularly for early-stage T2D cases and more diverse populations.

在全球范围内减少未确诊的2型糖尿病(T2D)的迫切需要需要创新的筛查方法。本研究探讨了使用基于语音的算法预测成人T2D状态的潜力,作为开发非侵入性和可扩展筛查方法的第一步。我们分析了在ClinicalTrials.gov (NCT04848623)上注册的Colive Voice研究的607名美国参与者预先指定的文本录音。使用混合BYOL-S/CvT嵌入,我们构建了基于性别的算法来预测T2D状态,并通过基于准确性、特异性、敏感性和曲线下面积(AUC)的交叉验证进行评估。根据年龄、BMI和高血压等关键因素对最佳模型进行分层,并使用Bland-Altman分析与美国糖尿病协会(ADA)的T2D风险评估评分进行比较。基于语音的算法显示出良好的预测能力(男性AUC = 75%,女性AUC = 71%),正确预测了71%的男性和66%的女性T2D病例。60岁及以上女性(AUC = 74%)和高血压患者(AUC = 75%)的表现有所改善,与ADA风险评分的总体一致性高于93%。我们的研究结果表明,基于语音的算法可以作为一种更容易获得、更具成本效益和非侵入性的T2D筛查工具。虽然这些结果很有希望,但需要进一步的验证,特别是对于早期T2D病例和更多样化的人群。
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引用次数: 0
EXAM: Ex-vivo allograft monitoring dashboard for the analysis of hypothermic machine perfusion data in deceased-donor kidney transplantation. 检查:离体异体移植监测仪表板,用于分析死亡供体肾移植中低温机灌注数据。
Pub Date : 2024-12-18 eCollection Date: 2024-12-01 DOI: 10.1371/journal.pdig.0000691
Simon Schwab, Hélène Steck, Isabelle Binet, Andreas Elmer, Wolfgang Ender, Nicola Franscini, Fadi Haidar, Christian Kuhn, Daniel Sidler, Federico Storni, Nathalie Krügel, Franz Immer

Deceased-donor kidney allografts are exposed to ischemic injury during ex vivo transport due to the lack of blood oxygen supply. Hypothermic machine perfusion (HMP) effectively reduces the risk of delayed graft function in kidney transplant recipients compared to standard cold storage. However, no free software implementation is available to analyze HMP data for state-of-the-art visualization and quality control. We developed the tool EXAM (ex-vivo allograft monitoring) as an interactive analytics dashboard. We wrote functions in the R programming language to read, process, and analyze HMP data from the LifePort kidney transporter (Organ Recovery Systems, USA). Time series for pressure, flow rate, organ resistance, and temperature are visualized, and relevant statistical indicators have been developed. We explain how data were processed, and indicators were calculated, and we present summary statistics for N = 255 kidney allografts receiving machine perfusion in Switzerland between 2020 and 2023. Median (interdecile range, IDR) of the main indicators were as follows: perfusion duration 5.18 hours (2.29-11.2), flow rate 110 ml/min (52.9-167), ice temperature 1.97°C (1.53-3.07), and perfusate temperature 6.68°C (5.58-8.36). We implemented the dashboard to identify issues, such as atypical perfusion parameters, high ice, or high perfusate temperature to inform transplant centers for quality assurance. In conclusion, EXAM is a free tool that statisticians and data scientists can quickly deploy to enable quality control at transplant organizations that use LifePort kidney transporters. An online viewer is available at https://data.swisstransplant.org/exam/.

在离体运输过程中,由于缺乏血氧供应,死亡的同种异体肾移植暴露于缺血性损伤。与标准冷藏相比,低温机器灌注(HMP)有效地降低了肾移植受者移植功能延迟的风险。然而,目前还没有免费的软件实现来分析HMP数据,以实现最先进的可视化和质量控制。我们开发了工具EXAM(离体异体移植物监测)作为一个交互式分析仪表板。我们用R编程语言编写函数来读取、处理和分析来自LifePort肾脏转运器(美国器官恢复系统公司)的HMP数据。压力,流量,器官阻力和温度的时间序列是可视化的,并制定了相关的统计指标。我们解释了数据是如何处理的,指标是如何计算的,我们提供了2020年至2023年瑞士接受机器灌注的N = 255个同种异体肾移植的汇总统计数据。主要指标的中位数(十分位数范围,IDR)为:灌注时间5.18 h(2.29 ~ 11.2),流速110 ml/min(52.9 ~ 167),冰温1.97℃(1.53 ~ 3.07),灌注温度6.68℃(5.58 ~ 8.36)。我们实施了仪表板来识别问题,如非典型灌注参数、高冰或高灌注温度,以通知移植中心以保证质量。总之,EXAM是一个免费的工具,统计学家和数据科学家可以快速部署它,在使用LifePort肾脏转运蛋白的移植组织中实现质量控制。在线查看器可访问https://data.swisstransplant.org/exam/。
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引用次数: 0
The feasibility of a visuo-cognitive training intervention using a mobile application and exercise with stroboscopic glasses in Parkinson's: Findings from a pilot randomised controlled trial. 使用移动应用程序和频闪眼镜进行帕金森病视觉认知训练干预的可行性:一项试点随机对照试验的结果。
Pub Date : 2024-12-18 eCollection Date: 2024-12-01 DOI: 10.1371/journal.pdig.0000696
Julia Das, Gill Barry, Richard Walker, Rodrigo Vitorio, Yunus Celik, Claire McDonald, Bryony Storey, Paul Oman, Rosie Morris, Samuel Stuart

Background: There is currently no pharmacological treatment for visuo-cognitive impairments in Parkinson's disease. Alternative strategies are needed to address these non-motor symptoms given their impact on quality of life. Novel technologies have potential to deliver multimodal rehabilitation of visuo-cognitive dysfunction, but more research is required to determine their feasibility in Parkinson's.

Objective: To determine the feasibility and preliminary efficacy of a home-based, technological visuo-cognitive training (TVT) intervention using a mobile application and exercise with stroboscopic glasses compared to non-technological care in people with Parkinson's.

Methods: This 18-month, parallel, two-arm pilot trial took place between July 2021-December 2022. Participants were community-dwelling individuals with a diagnosis of Parkinson's, aged over 50 years. Participants were randomly allocated to one of two active four-week interventions, TVT (n = 20) or standard care (SC) (n = 20). A physiotherapist delivered 8 home visits over 4 weeks, lasting 45-60 mins. Participants were evaluated at baseline and then on completion of the intervention. Primary outcomes were feasibility of the study design and intervention (recruitment/retention, adherence, assessment time scale, equipment and safety). Exploratory outcomes included assessments of cognitive, visual, clinical and motor function. (Blinding of participants was not possible due to the nature of the intervention).

Results: The recruitment rate was 60% (40/67), and the retention rate was 98% (39/40). Adherence to both arms of the intervention was high, with participants attending 98% of visits in the TVT group and 96% of visits in the SC group. 35% (9/20) of participants in the TVT group experienced mild symptoms associated with use of the stroboscopic glasses which included dizziness, queasiness and unsteadiness. There were minimal between group differences, with both interventions having positive effects on a variety of clinical, cognitive, and physical performance outcomes.

Conclusions: Our findings suggest that home-based TVT with a physiotherapist is feasible in people with Parkinson's and could provide an alternative approach to addressing cognitive and motor dysfunction in this population. We make recommendations for future trials and invite ensuing studies to improve upon the design and utilise stroboscopic visual training and digital tools to investigate this emerging area of multimodal rehabilitation. This trial was prospectively registered at ISRCTN (registration number: ISRCTN46164906; https://doi.org/10.1186/ISRCTN46164906).

背景:目前还没有针对帕金森病视觉认知障碍的药物治疗。考虑到这些非运动症状对生活质量的影响,需要采取其他策略来解决这些问题。新技术有可能实现视觉认知功能障碍的多模式康复,但需要更多的研究来确定其在帕金森病中的可行性。目的:与非技术护理相比,确定基于家庭的、使用移动应用程序和带频闪眼镜运动的技术视觉认知训练(TVT)干预在帕金森病患者中的可行性和初步效果。方法:这项为期18个月的平行双臂试点试验于2021年7月至2022年12月进行。参与者是年龄在50岁以上的帕金森氏症患者。参与者被随机分配到两种积极的为期四周的干预措施之一,TVT (n = 20)或标准治疗(n = 20)。一名物理治疗师在4周内进行了8次家访,每次持续45-60分钟。参与者在基线进行评估,然后在干预完成时进行评估。主要结局是研究设计和干预的可行性(招募/保留、依从性、评估时间尺度、设备和安全性)。探索性结果包括认知、视觉、临床和运动功能的评估。(由于干预的性质,不可能对参与者进行盲法)。结果:入组率为60%(40/67),留用率为98%(39/40)。两组干预的依从性都很高,TVT组98%的参与者参加了就诊,SC组96%的参与者参加了就诊。TVT组中35%(9/20)的参与者经历了与使用频闪眼镜相关的轻微症状,包括头晕、恶心和不稳定。两组之间的差异很小,两种干预措施对各种临床、认知和身体表现结果都有积极影响。结论:我们的研究结果表明,在物理治疗师的指导下,以家庭为基础的TVT对帕金森病患者是可行的,并且可以为解决这一人群的认知和运动功能障碍提供另一种方法。我们对未来的试验提出建议,并邀请后续研究改进设计,利用频闪视觉训练和数字工具来研究这一新兴的多模式康复领域。该试验在ISRCTN前瞻性注册(注册号:ISRCTN46164906;https://doi.org/10.1186/ISRCTN46164906)。
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