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First report of Fusarium oxysporum causing root rot of garlic in China 国内首次报道尖孢镰刀菌引起大蒜根腐病
Pub Date : 2022-02-28 DOI: 10.5897/ajmr2021.9586
F. Guo, Jie Zhou, Chuandong Qi, Jiaping Fu, Jinping Wu
In the springs of 2020 and 2021, with a temperature of 15°C, root rot on garlic were widespread in Enshi, Hubei Province, China. Based on micro-morphological and cultural characteristics, the pathogen was identified as a Fusarium sp. Further, based on multilocus (ITS, EF-1α) phylogenic data, the strains were identified as Fusarium oxysporum. Koch’s postulates were thus fulfilled by pathogenicity tests on garlic seedlings cultured in vitro.
2020年和2021年春季,气温为15°C,大蒜根腐病在中国湖北省恩施市普遍存在。根据微观形态和培养特征,该病原体被鉴定为镰刀菌。此外,根据多点系统发育数据(ITS,EF-1α),该菌株被鉴定为尖孢镰刀菌(Fusarium oxysporum)。因此,通过对体外培养的大蒜幼苗进行致病性测试,满足了Koch的假设。
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引用次数: 0
Isolation of potentially pathogenic bacteria from Musca domestica captured in hospitals and slaughterhouses, Khartoum state, Sudan 从苏丹喀土穆州医院和屠宰场捕获的家蝇中分离出潜在致病菌
Pub Date : 2022-02-28 DOI: 10.5897/ajmr2021.9580
Itaype Ibrahim Bashir Isam-Eldeen, Yousri Muatsim Hamid AlaaEldin, A. I. Mohamed, H. A. Eltayib
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引用次数: 0
Impact of mycorrhization on transplanting stress and the juvenile growth of an Ivorian forest species Guibourtia ehie (Fabaceae, (A. Chev.) J. Leonard) 菌根化对科特迪瓦森林种紫檀移栽胁迫及幼苗生长的影响j·伦纳德)
Pub Date : 2022-01-31 DOI: 10.5897/ajmr2021.9542
Bi Rosin Voko Don-Rodrigue, C. K. Kouassi, Athanase Kouassi Kra, Konaté Ibrahim
Ivorian forest has been experiencing degradation for several decades despite reforestation efforts. The main cause of the failure of reforestation policies is an important mortality at the time of planting (transplanting stress). To remedy this problem, mycorrhization technology based on the beneficial effects of arbuscular mycorrhizal fungi (AMF) could provide a sustainable solution. The objective of this study was to evaluate the effects of AMF inocula (local and commercial inoculum) on the juvenile growth of a Côte d'Ivoire forest species ( Guibourtia ehie ). Vegetative growth parameters and mineral nutrition (N, P, K, and Ca) were evaluated. After 150 days of cultivation, the plants treated with the local inoculum had the highest mycorrhization frequencies (75%) and intensities (21.23%). Also for growth parameters (height, number of leaves, leaf area, and crown diameter) and for nitrogen and potassium contents, the plants treated with the local polyspecific inoculum had the highest values compared to the plants treated with the commercial inoculum and the control plants. Mycorrhization improved mineral nutrition as well as vegetative growth of G. ehie seedlings. The integration of mycorrhizal inoculation from local strains in reforestation policies could be a sustainable solution for the recolonization of degraded forests by endangered species.
尽管进行了重新造林的努力,科特迪瓦的森林几十年来一直在退化。重新造林政策失败的主要原因是种植时的重要死亡率(移植压力)。为了解决这个问题,基于丛枝菌根真菌(AMF)有益效果的菌根技术可以提供一个可持续的解决方案。本研究的目的是评估AMF接种物(当地和商业接种物)对科特迪瓦森林物种(Guibourtia ehie)幼龄生长的影响。对营养生长参数和矿物质营养(N、P、K和Ca)进行了评估。培养150天后,用局部接种物处理的植物具有最高的菌根频率(75%)和强度(21.23%)。此外,在生长参数(高度、叶数、叶面积和冠径)以及氮和钾含量方面,与用商业接种物处理的植物和对照植物相比,用本地多特异性接种物处理过的植物具有最高的值。菌根改善了葛苗的矿质营养和营养生长。将当地菌株的菌根接种纳入重新造林政策可能是濒危物种对退化森林重新定居的可持续解决方案。
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引用次数: 0
Characterization of culturable microbial community in oil contaminated soils in Greater Port Harcourt Area, Nigeria 尼日利亚大哈科特港地区石油污染土壤中可培养微生物群落特征
Pub Date : 2022-01-31 DOI: 10.5897/ajmr2020.9398
M. Wanjala, L. Odokuma, I. Etela, R. Ramkat, B. Odogwu
1 Department of Microbiology, Faculty of Science, University of Port Harcourt, Nigeria. 2 Department of Animal Science, Faculty of Agriculture, University of Port Harcourt, Nigeria. 3 Center of Excellence in Phytochemicals, Textiles and Renewable Energy, Faculty of Science, Moi University, Eldoret, Kenya. 4 Department of Plant Science and Biochemistry, Faculty of Science, University of Port Harcourt, Nigeria. 5 Department of Physical and Biological Sciences, Faculty of Science, Bomet University College, Kenya.
1尼日利亚哈科特港大学理学院微生物学系。2尼日利亚哈科特港大学农业学院动物科学系。3肯尼亚埃尔多雷特莫伊大学理学院植物化学物质、纺织品和可再生能源卓越中心。4尼日利亚哈科特港大学理学院植物科学和生物化学系。5肯尼亚博梅特大学学院理学院物理和生物科学系。
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引用次数: 0
Antibiotic-producing bacteria isolated from some natural habitats in the Federal Capital Territory (FCT), Nigeria 从尼日利亚联邦首都地区(FCT)的一些自然栖息地分离出的产抗生素细菌
Pub Date : 2022-01-31 DOI: 10.5897/ajmr2021.9587
Olumuyiwa Balogun Olasinbo, C. Sylvanus, O. Peters
High global prevalence of multidrug-resistant bacteria due to antibiotics misuse has prompted the need for novel antibacterial compounds to replace the failing antibiotics. This study investigated some natural habitats in Abuja, Nigeria, for antibiotics-producing bacteria. Thirty-six soil samples from termite mounds, river banks and rhizospheres of Anacardium occidentale L. (cashew tree), Gmelina arborea Roxb. ex Sm. (beechwood), Ageratum conyzoides L. (goat weed) including Cymbopogon citratus (DC) Stapf. (lemon grass) were cultured on nutrient media. Twelve potential antibiotic-producing isolates were identified by crowded plates method and characterized using Bergey’s manual. The antimicrobial activities of the filtrates from the isolates against some pathogenic strains namely Streptococcus pneumonia, Salmonella typhi, Escherichia coli (ATCC 25922), Proteus mirabilis, Staphylococcus aureus (ATCC 25923), Candida albicans, Bacillus subtilis and Pseudomonas aeruginosa (ATCC 27853) were determined by agar-well diffusion method. Only 5 eventually inhibited at least 1 test microorganism; 4 showed activities against both Gram-positive and Gram-negative bacteria (broad spectrum) and 2 among the 4 also inhibited Candida albicans , while the remaining 1 inhibited only 1 Gram-positive bacterium (narrow spectrum). The 5 potent antibiotics-producers were Bacillus spp. In conclusion, some natural habitats in the FCT are important sources of antibiotic-producing bacteria. Their antimicrobial lead compounds could be extracted and developed locally for pharmaceutical applications.
由于抗生素滥用,全球多药耐药细菌的高流行率促使人们需要新的抗菌化合物来取代失效的抗生素。本研究调查了尼日利亚阿布贾一些产生抗生素的细菌的自然栖息地。从西方腰果树白蚁丘、河岸和根际采集36份土壤样品。Sm。(山毛榉),Ageratum conyzoides L.(山羊杂草)包括Cymbopogon citratus (DC) Stapf。(柠檬草)在营养培养基上培养。采用拥挤平板法鉴定了12株可能产生抗生素的分离株,并用Bergey手册对其进行了鉴定。采用琼脂孔扩散法测定了分离滤液对肺炎链球菌、伤寒沙门氏菌、大肠杆菌(ATCC 25922)、奇异变形杆菌、金黄色葡萄球菌(ATCC 25923)、白色念珠菌、枯草芽孢杆菌和铜绿假单胞菌(ATCC 27853)的抑菌活性。只有5个最终抑制了至少1种被试微生物;4株对革兰氏阳性菌和革兰氏阴性菌均有抑制作用(广谱),其中2株对白色念珠菌有抑制作用,其余1株仅对1株革兰氏阳性菌有抑制作用(窄谱)。综上所述,FCT的一些自然生境是产生抗生素细菌的重要来源。它们的抗菌先导化合物可以在当地提取和开发用于制药应用。
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引用次数: 1
Microbiological, nutritional and sensory evaluation of snack bars developed using Bambara groundnut (Vigna subterranean L.) and maize (Zea mays) 使用班巴拉花生(Vigna underground L.)和玉米(Zea mays)开发的小吃店的微生物学、营养和感官评估
Pub Date : 2022-01-31 DOI: 10.5897/ajmr2021.9583
Ahaotu Ihuoma, Okechukwu Ichendu Marvellous, Maduka Ndukwe
Over the years, snacking has become a regular habit for majority of the population with increasing need for food manufacturers to meet consumers’ demand through product development. In this study, snack bars were prepared using maize and Bambara nuts mixed in the following ratios: A, 100% maize; B, 100% Bambara nuts; C, 50% maize: 50% Bambara nuts; D, 75% maize: 25% Bambara nuts; E, 75% Bambara nuts: 25% maize. The total heterotrophic bacterial count of samples A to E was within the limit stipulated by International Commission on Microbiological Specification for Food. The frequency of occurrence of bacterial isolates from the samples include Bacillus species (24%), Staphylococcus species (24%), Lactobacillus species (24%), Escherichia coli (19%) and Serratia species (9%), while the fungal isolates include Aspergillus (33%), Penicillium (27%), Rhizopus (20%) and Saccharomyces species (20%). The moisture, ash, carbohydrate, crude protein, fat and fiber content of the samples were within the range of 11.47±0.99-17.45±1.01, 1.09±0.07-2.00±0.15, 56.05±0.65-70.37±0.71, 6.32±0.36-15.00±0.22, 4.60±0.50-7.00±0.30 and 2.60±0.25-3.10±0.31%, respectively. There was a significant difference (p<0.05) in the proximate composition among the samples except for crude fiber. The calorie value range between 347.20-367.69 kcal and acceptability of the samples compared favourably with a commercialized snack bar.
多年来,随着食品制造商越来越需要通过产品开发来满足消费者的需求,吃零食已成为大多数人的常规习惯。在这项研究中,小吃店是用玉米和班巴拉坚果按以下比例混合而成的:A,100%玉米;B、 100%班巴拉坚果;C、 50%玉米:50%班巴拉坚果;D、 75%的玉米:25%的班巴拉坚果;E、 75%的班巴拉坚果:25%的玉米。样品A至E的异养细菌总数在国际食品微生物规范委员会规定的限度内。从样品中分离出的细菌的出现频率包括芽孢杆菌(24%)、葡萄球菌(24%),乳酸杆菌(24%,大肠杆菌(19%)和沙雷氏菌(9%),而真菌分离物包括曲霉(33%)、青霉(27%)、根霉(20%)和酵母(20%)。样品的水分、灰分、碳水化合物、粗蛋白、脂肪和纤维含量分别在11.47±0.99-17.45±1.01、1.09±0.07-2.00±0.15、56.05±0.65-70.37±0.71、6.32±0.36-15.00±0.22、4.60±0.50-7.00±0.30和2.60±0.25-3.10±0.31%的范围内。除粗纤维外,各样品的近似成分差异显著(p<0.05)。热量值在347.20-367.69千卡之间,与商业化的小吃店相比,样品的可接受性良好。
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引用次数: 3
Isolation and identification of cellulose-degrading endophytic bacteria from Tomoceridae (springtails) 弹尾虫科纤维素降解内生细菌的分离与鉴定
Pub Date : 2022-01-31 DOI: 10.5897/ajmr2021.9582
D. Wei, Xiulian Miao, Yue Tian, Jing Du, Meng Wang
Springtails are considered as an important candidate bioindicator to assess soil quality spiked with trace metals, but little is known of their endophytic bacteria. In this study, a kind of Tomoceridae springtail was used, and a total of 45 effective sequences were obtained through the process of endophytic bacteria isolation, culture, polymerase chain reaction (PCR) amplification and sequencing. After NCBI-BLAST, the results showed that there were 20 bacterial colonies belonging to the genus Staphylococcus, 12 belonging to the genus Bacillus, 7 belonging to the genus Paenibacillus, 1 belonging to the genus Exiguobacterium and 5 belonging to Acinetobacter lwoffii. Furthermore, five bacterial strains from these five genera (named TomoRZH14, TomoRZH26, TomoRZH30, TomoRZH37, TomoRZH40) were selected for cellulose degradation analysis. The results showed that TomoRZH26 (Bacillus sp.) seemed to have a stronger cellulose degradation ability than those of the other four strains, while the three main components cellulase endo-β-glucanase, exo-β-glucanase and βglucosidase in TomoRZH26 showed significantly higher enzymatic activity than in the other strains. Viscosity analysis also showed that the TomoRZH26 bacterium degraded relatively quickly in cellulase fermentation medium. In general, in this study, we preliminarily revealed several endophytic bacteria of Tomoceridae springtails and found that they had potentially strong cellulose degradation activity, which may be one of the important reasons behind springtail adaptation to this kind of soil ecological environment.
弹跳虫被认为是评估土壤质量的重要候选生物指标,但对其内生细菌知之甚少。本研究以一种春尾绒尾虫为研究对象,通过内生细菌的分离、培养、聚合酶链反应(PCR)扩增和测序等过程,共获得45条有效序列。NCBI-BLAST分析结果显示,葡萄球菌属菌落20个,芽孢杆菌属菌落12个,芽孢杆菌属菌落7个,出革杆菌属菌落1个,伊氏不动杆菌属菌落5个。并从这5个属中选取5株菌株(命名为TomoRZH14、TomoRZH26、TomoRZH30、TomoRZH37、TomoRZH40)进行纤维素降解分析。结果表明,TomoRZH26 (Bacillus sp.)对纤维素的降解能力强于其他4株菌株,其纤维素酶内切-β-葡聚糖酶、外切-β-葡聚糖酶和β葡萄糖苷酶3个主要组分的酶活性均显著高于其他菌株。黏度分析还表明,TomoRZH26菌在纤维素酶发酵培养基中降解速度较快。总的来说,在本研究中,我们初步发现了几种弹尾Tomoceridae的内生细菌,发现它们具有潜在的较强的纤维素降解活性,这可能是弹尾适应这种土壤生态环境的重要原因之一。
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引用次数: 0
Antibody responses after Oxford AstraZeneca (Covishield) vaccine among healthcare workers in Dhaka Medical College, Dhaka, Bangladesh 孟加拉国达卡医学院医护人员接种牛津阿斯利康疫苗后的抗体反应
Pub Date : 2022-01-01 DOI: 10.5897/AJMR2021.9590
N. Tanni, M. Nesa, R. Kabir, F. Habib, R. Zaman, N. Tania, A. Haque, A. Chowdhury, N. Sharmin, K. Halder, M. Chowdhury, M. Rahman, S. Shahid, S. Nahar, S. Shamsuzzaman
Oxford AstraZeneca (Covishield) vaccine is the 1st vaccine administered in Bangladesh to prevent the spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The antibody response after 1st and 2nd doses of this vaccine was assessed in health care workers of Dhaka Medical College Hospital, Bangladesh. Blood sample was collected from healthcare workers (teachers, clinicians and medical staff) after 28 days of 1st vaccination and 14 days after 2nd vaccination. Quantitative post-vaccination antibody responses were measured using the chemiluminescent immunoassay, ADVIA Centaur (Siemens, Munich, Germany) SARS-CoV-2 IgG (COV2G) assay (output index was 1.00). Vaccine related antibody was found in 126 (41%) participants after 1st dose of AstraZeneca vaccine. After 2nd dose of vaccine, reactive level of antibody was found in 172 (93%) participants. Antibody responses were significantly higher in previously infected participants compared to participants who had no history of previous COVID-19 after 1st dose (51.92+or-50.85 vs 23.67+or-41.07, p=0.001) as well as 2nd dose of vaccine (64.12+or-97.76 vs 35.04+or-64.84, p=0.001). No difference in antibody response was observed among participants with or without comorbidities. Oxford AstraZeneca Covishield vaccine induces a strong immune response after two doses of vaccination.
牛津阿斯利康(Covishield)疫苗是孟加拉国为防止严重急性呼吸综合征冠状病毒2 (SARS-CoV-2)传播而接种的第一种疫苗。在孟加拉国达卡医学院医院的卫生保健工作者中评估了该疫苗第一剂和第二剂后的抗体反应。卫生保健工作者(教师、临床医生和医务人员)在第一次接种疫苗28天后和第二次接种疫苗14天后采集血样。采用化学发光免疫分析法,ADVIA Centaur (Siemens, Munich, Germany) SARS-CoV-2 IgG (COV2G)测定法(输出指数为1.00),定量测定疫苗接种后抗体应答。126名(41%)参与者在第一次接种阿斯利康疫苗后发现疫苗相关抗体。在第2次接种后,172例(93%)参与者的抗体出现反应性水平。在第一次接种疫苗(51.92+or-50.85 vs 23.67+or-41.07, p=0.001)和第二次接种疫苗(64.12+or-97.76 vs 35.04+or-64.84, p=0.001)后,先前感染的参与者的抗体反应明显高于之前没有COVID-19病史的参与者。在有或没有合并症的参与者中,没有观察到抗体反应的差异。牛津阿斯利康Covishield疫苗诱导强烈的免疫反应后,两剂疫苗接种。
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引用次数: 0
Molecular characterization of high-risk infection vaginal bacteria isolated from pregnant women in CHU-MEL of Cotonou (Benin) 从科托努(贝宁)CHU-MEL孕妇身上分离的高危感染阴道细菌的分子特征
Pub Date : 2021-12-31 DOI: 10.5897/ajmr2021.9589
Sina Haziz, N. Christine, D. Durand, Gnama-Tchao Gnimdou, B. Bawa, Socohou Akim, Ramanou Alao Sanni Abdou, Baba-Moussa Farid, A. Adolphe, B. Lamine
The aim of this study is to determine the distribution of the genotypic pathogenicity traits of vaginal high-risk infectious bacteria (HRIB) collected in the CHU-MEL of Cotonou (Benin). To achieve this, a recto-vaginal swab of 42 pregnant women in the third trimester of pregnancy was collected. Species identification was carried out by specific biochemical tests. Antimicrobial susceptibility was tested according to the microbiology standard recommendation. Macrolide resistance genes in Gram-positive bacteria and virulence genes in Escherichia coli were investigated by polymerase chain reaction (PCR). E. coli is the most isolated species (14.7%) followed by Klebsiella pneumoniae (11.8%). Mono-microbial carriage was 55.9%. Gram-negative antibiotic susceptibility shows strong resistance to beta lactam. While Gram-positive bacteria showed strong resistance to beta-lactamine, tetracycline and macrolides with cMLS B (70.4%), iMLS B (3.7%) and M (25.9%) phenotypes. ErmB and ermTR were not detected in Gram-positive bacteria but mef(A/E) was detected at a high. Virulence genes in E. coli were detected and fimA was the most common (52.2%) followed by sfa/foc (30.4%) and cnf1 (13.0%). NeuC and ibeA have not been detected. The hvgA virulence gene was detected in S. agalactiae at a rate of 61.54%. These results demonstrate the importance of introducing antenatal screening for HRIB to improve obstetric and neonatal management in Benin.
本研究的目的是确定在科托努(贝宁)的CHU-MEL中收集的阴道高危感染菌(HRIB)的基因型致病性特征的分布。为此,收集了42名妊娠晚期孕妇的直肠阴道拭子。物种鉴定是通过特定的生化测试进行的。根据微生物学标准的建议对抗菌药物的敏感性进行了测试。采用聚合酶链式反应(PCR)方法对革兰氏阳性菌大环内酯类耐药基因和大肠杆菌毒力基因进行了研究。大肠杆菌是分离最多的菌种(14.7%),其次是肺炎克雷伯菌(11.8%)。单菌携带率为55.9%。革兰氏阴性抗生素敏感性显示对β-内酰胺有很强的耐药性。而革兰氏阳性菌对β-内酰胺、四环素和大环内酯类药物表现出较强的耐药性,具有cMLS B(70.4%)、iMLS B和M(25.9%)表型。ErmB和ermTR在革兰氏阳性菌中未检测到,但mef(A/E)检测到较高。在大肠杆菌中检测到毒力基因,其中fimA最常见(52.2%),其次是sfa/foc(30.4%)和cnf1(13.0%),未检测到NeuC和ibeA。在无乳双歧杆菌中检测到hvgA毒力基因的比率为61.54%。这些结果表明,引入HRIB产前筛查对改善贝宁产科和新生儿管理的重要性。
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引用次数: 0
Taeniasis-cysticercosis complex and tuberculosis in food 食物中的带绦虫-囊尾蚴病与结核病
Pub Date : 2021-12-31 DOI: 10.5897/ajmr2021.9578
Milton Coutinho Salomão Maira, Santana Soares e Barros Ludmilla
Although in 2020 the country's Gross Domestic Product (GDP) declined 4.1% compared to the previous year, the participation of livestock in the same period increased its representation from 8.4 to 10%. It is estimated that Brazil's contribution to the world food market has grown from 20.6 billion to 100 billion and the prospects are for greater increases for the coming years. In terms of people fed, the numbers were 800 million people. Thus, it is important to avoid the occurrence of illnesses, especially those transmitted by food. Included in this group are zoonosis, defined as diseases transmitted by animals to humans, which can be bacterial, viral or parasitic. According to the World Organization for Animal Health, 60% of human infectious diseases are zoonotic and 75% of emerging infectious disease agents in man is of animal origin. Among the main ones are the taeniasis-cysticercosis complex and tuberculosis. They are a global public health problem and prevent the efficient production of food. This work is a literature review that aimed to discuss the causative agents of these diseases, as well as the characteristics, contamination in food and possible measures for its control.
尽管2020年该国的国内生产总值比前一年下降了4.1%,但同期牲畜的参与率从8.4%增加到了10%。据估计,巴西对世界粮食市场的贡献已从206亿增长到1000亿,未来几年的增长前景更大。就养活的人而言,这一数字为8亿人。因此,重要的是要避免疾病的发生,尤其是通过食物传播的疾病。这一类包括人畜共患病,定义为动物传播给人类的疾病,可以是细菌、病毒或寄生虫。根据世界动物卫生组织的数据,60%的人类传染病是人畜共患的,75%的人类新发传染病病原体是动物源性的。其中最主要的是带绦虫囊尾蚴病和肺结核。它们是一个全球性的公共卫生问题,阻碍了粮食的高效生产。这项工作是一篇文献综述,旨在讨论这些疾病的病原体,以及食品的特征、污染和可能的控制措施。
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引用次数: 0
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African Journal of Microbiology Research
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