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Redefining Pathobiology with Spatial Multi-Omics at the Intersection of Biology, Computation, and Histopathological Assessment. 在生物学、计算和组织病理学评估的交叉点用空间多组学重新定义病理生物学。
IF 3.6 2区 医学 Q1 PATHOLOGY Pub Date : 2026-02-11 DOI: 10.1016/j.ajpath.2026.01.007
Ankit Agrawal, Stefan Thomann

Spatial profiling technologies are transforming our understanding of tissue organization by enabling high-resolution mapping of molecular features in situ. Spatial multi-omics platforms ranging from spot-based to single-cell and subcellular resolution are increasingly being integrated into pathobiological workflows, offering unprecedented insights into novel cellular states, the tissue microenvironment, cell-cell communication, drug resistance niches, and disease heterogeneity. This article discusses recent experimental and computational advances in spatial biology, highlighting how multimodal integration enables a more comprehensive understanding of tissue function and its dysregulation. The challenges and opportunities that arise in three-dimensional spatial mapping, the impact on biomarker discovery, therapeutic decision-making, and the translational implications of large-scale pathology foundation models trained on spatial omics data are explored. Finally, it's highlighted that refined biological questions, combined with artificial intelligence, can unlock the full potential of spatial omics and reshape diagnostic workflows toward more precise clinical decision-making.

空间分析技术正在改变我们对组织组织的理解,使分子特征的高分辨率测绘成为可能。从基于点的到单细胞和亚细胞分辨率的空间多组学平台正越来越多地集成到病理生物学工作流程中,为新的细胞状态、组织微环境、细胞-细胞通信、耐药利基和疾病异质性提供了前所未有的见解。在本文中,我们讨论了空间生物学的最新实验和计算进展,强调了多模式整合如何使组织功能及其失调得到更全面的理解。我们探讨了3D空间制图中出现的挑战和机遇,对生物标志物发现的影响,治疗决策,以及基于空间组学数据训练的大规模病理基础模型的转化意义。最后,我们强调,精细化的生物学问题,结合人工智能,可以释放空间组学的全部潜力,重塑诊断工作流程,以实现更精确的临床决策。
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引用次数: 0
Central Role of MITF/TFE Family Transcription Factors in Diverse Clear and Granular Cell Tumors. MITF/TFE家族转录因子在多种透明细胞和颗粒细胞肿瘤中的核心作用。
IF 3.6 2区 医学 Q1 PATHOLOGY Pub Date : 2026-02-06 DOI: 10.1016/j.ajpath.2026.01.010
Dale Davis, John Hanna

Clear cell morphology is an uncommon finding in human tumors and reflects the distinctive appearance of the cytoplasm under standard histopathologic examination. Granular cell morphology appears to be a closely related phenomenon and reflects an abundant eosinophilic cytoplasm. Accumulating evidence suggests a central role for the MITF/TFE family of transcription factors in diverse clear cell and granular cell neoplasms. A principal function of these transcription factors concerns cytoplasmic organellar biogenesis: TFEB is the master regulator of lysosome biogenesis while MITF controls the biogenesis of lysosome-related organelles known as melanosomes, which are responsible for melanin pigment production. This article reviews the role of MITF/TFE pathway activation in a variety of benign and malignant tumors, with an emphasis on the diverse oncogenic mechanisms that activate this pathway and the resulting altered cell biology that contributes to the distinctive histomorphologic features.

透明细胞形态在人类肿瘤中是一种罕见的发现,它反映了标准组织病理学检查下细胞质的独特外观。颗粒细胞形态似乎是一个密切相关的现象,反映了丰富的嗜酸性细胞质。越来越多的证据表明,MITF/TFE转录因子家族在各种透明细胞和颗粒细胞肿瘤中起着核心作用。这些转录因子的主要功能涉及细胞质细胞器的生物发生:TFEB是溶酶体生物发生的主要调节剂,而MITF控制溶酶体相关细胞器的生物发生,即负责黑色素色素产生的黑素体。在这里,我们回顾了MITF/TFE通路激活在各种良性和恶性肿瘤中的作用,重点是激活该通路的多种致癌机制以及由此导致的细胞生物学改变,这些改变有助于形成独特的组织形态学特征。
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引用次数: 0
Non-Cell-Autonomous Mechanisms and Systemic Interactions in Spinal Muscular Atrophy. 脊髓性肌萎缩的非细胞自主机制和系统相互作用。
IF 3.6 2区 医学 Q1 PATHOLOGY Pub Date : 2026-02-06 DOI: 10.1016/j.ajpath.2026.01.011
Junjie Sun, Weitong Wang, Chengye Liu, Guicai Li, Luzhong Zhang, Lingyan Xing, Liucheng Wu

Spinal muscular atrophy (SMA) is an inherited neurodegenerative disorder caused by a deficiency of the survival motor neuron (SMN) protein. Traditionally, it has been classified as a motor neuron disease. Over the past decade, however, numerous nonmotor neuronal and nonneural pathologies reported in both patients with SMA and mouse models have led to its redefinition as a systemic disorder. Although SMN protein expression outside the central nervous system is well established, it remains controversial whether its functional loss in nonneuronal cells/tissues merely represents a comorbidity or actively contributes to driving motor neuron degeneration. This review summarizes key evidence supporting the non-cell-autonomous death of motor neurons in SMA. On the basis of these lines of evidence, three potential pathways for pathologic transmission are proposed: i) neuroinflammatory and neurotoxicity signaling mediated by glial cells, ii) aberrant retrograde signaling from the neuromuscular junction, and iii) modulation of the central nervous system by peripheral factors via the circulatory system. Future studies should focus on identifying critical peripheral tissues involved in SMA pathogenesis, elucidating the molecular mechanisms by which SMN deficiency leads to dysfunction in these tissues, and characterizing key mediators that influence motor neuron survival. In the current era where SMN-enhancing therapies have significantly improved patient survival, a deeper understanding of non-cell-autonomous mechanisms, and targeting them, represents a crucial step toward achieving curative strategies for SMA.

脊髓性肌萎缩症(SMA)是一种由存活运动神经元(SMN)蛋白缺乏引起的遗传性神经退行性疾病。传统上,它被归类为运动神经元疾病。然而,在过去的十年中,在SMA患者和小鼠模型中报道的许多非运动神经元和非神经病变导致其被重新定义为一种全身性疾病。尽管SMN蛋白在中枢神经系统(CNS)外的表达已得到证实,但其在非神经元细胞/组织中的功能丧失是否仅仅是一种共病,还是积极促进了运动神经元的退化,仍存在争议。本文综述了支持SMA中运动神经元非细胞自主死亡的关键证据。基于这些证据,我们提出了三种潜在的病理传递途径:(1)神经胶质细胞介导的神经炎症和神经毒性信号,(2)神经肌肉连接处的异常逆行信号,以及(3)外周因子通过循环系统调节中枢神经系统。未来的研究应侧重于识别参与SMA发病的关键外周组织,阐明SMN缺乏导致这些组织功能障碍的分子机制,并确定影响运动神经元存活的关键介质。在当前时代,smn增强疗法显著提高了患者的生存率,深入了解非细胞自主机制,并针对它们,是实现SMA治疗策略的关键一步。
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引用次数: 0
Dermal Microvascular Responses of Human Induced Pluripotent Stem Cell-Derived Skin Organoids to Inflammation and Injury. 人ipsc衍生的皮肤类器官对炎症和损伤的皮肤微血管反应。
IF 3.6 2区 医学 Q1 PATHOLOGY Pub Date : 2026-02-02 DOI: 10.1016/j.ajpath.2026.01.005
Anthony R Sheets, Shannon M McNamee, Christine G Lian, George F Murphy

Cutaneous dermal microvascular responses are critical to common inflammatory skin conditions and effective wound healing. However, few laboratory models effectively recreate the spatially intact microenvironment essential for genesis and function of the human dermal microcirculation. Recently, stem cell-derived skin organoids (SKOs) have been developed that possess many microanatomic and cellular features of native human skin, including hair-forming epidermis and an underlying dermal layer containing endothelial-lined channels. Here, temporal dynamics of human SKO vasculogenesis are profiled and organoid responses to inflammatory and traumatic stimuli are interrogated. SKOs generated from induced pluripotent stem cells expressing endothelial-specific green fluorescent protein develop vasculogenic foci by post-differentiation day 6 that evolved into extensive microvascular networks that persisted beyond 4 months in culture. Multiplex antibody arrays provided mechanistic insight into secreted effectors supporting early events in SKO vasculogenesis. Over time, SKO microvasculature became ensheathed by mural cells producing collagen IV-rich basement membranes, whereas endothelium retained signatures of proliferative activity/immaturity. Functionally, SKOs treated with proinflammatory cytokines expressed markers of endothelial and perivascular vascular activation, with concomitant release of endogenous inflammatory mediators. Finally, wounding of SKOs via sharp dissection provided the first demonstration of angiogenic healing responses that were further augmented by exogenous vascular endothelial growth factor. Overall, this advanced human culture system represents a highly relevant model for understanding biological responses by the dermal microvasculature.

皮肤真皮微血管反应对常见的炎症性皮肤状况和有效的伤口愈合至关重要。然而,很少有实验室模型能有效地重现人体皮肤微循环发生和功能所必需的空间完整的微环境。最近,干细胞衍生的皮肤类器官(SKOs)已经被开发出来,具有许多人体皮肤的微观解剖和细胞特征,包括形成毛发的表皮和含有内皮细胞通道的真皮。在这里,我们描述了人类SKO血管发生的时间动态,并询问了类器官对炎症和创伤刺激的反应。由表达内皮特异性GFP的IPSCs产生的sko在分化后第6天形成血管源性灶,并演变成广泛的微血管网络,在培养中持续4个月以上。多重抗体阵列提供了支持SKO血管发生早期事件的分泌效应物的机制,包括VEGFA和胎盘生长因子。随着时间的推移,SKO微血管被α sma阳性(+)、PDGFRβ+的壁细胞所包裹,产生富含iv型胶原的基底膜,而内皮保留了增殖激活/不成熟的标志物,包括巢蛋白。功能上,SKOs用内皮和血管周围表达VCAM1和ICAM1的促炎细胞因子处理,同时释放内源性炎症介质。最后,通过尖锐解剖损伤SKOs首次证明了血管生成愈合反应,外源性VEGF进一步增强了血管生成愈合反应。总的来说,这种先进的人类培养系统代表了一个高度相关的模型,用于理解皮肤微血管的生物反应。
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引用次数: 0
Increased Meflin Expression in Cancer-Associated Fibroblasts Restrains Tumor Cell Proliferation and Shapes Vessel-Rich Stroma in Triple-Negative Breast Cancer. 在三阴性乳腺癌中,癌症相关成纤维细胞中Meflin表达的增加抑制肿瘤细胞增殖和形成富含血管的基质。
IF 3.6 2区 医学 Q1 PATHOLOGY Pub Date : 2026-02-02 DOI: 10.1016/j.ajpath.2026.01.006
Akihiro Sakai, Yuki Miyai, Yukihiro Shiraki, Ryota Ando, Nobutoshi Esaki, Tadashi Iida, Takahiro Sugie, Masahiro Shibata, Toyone Kikumori, Norikazu Masuda, Hiroyoshi Y Tanaka, Mitsunobu R Kano, Atsushi Enomoto, Shinji Mii

Recent studies have shown that cancer-associated fibroblasts (CAFs), a key component of the tumor microenvironment, are heterogeneous and can be divided into distinct subsets. Although all CAFs were believed to promote tumor progression, recent studies have identified a distinguished subset of tumor-restraining CAFs (rCAFs). It was previously demonstrated that the up-regulation of Meflin (immunoglobulin superfamily containing leucine-rich repeat) expression confers a tumor-restraining role on CAFs in pancreatic, colon, urothelial, and lung cancers. Triple-negative breast cancer (TNBC) is an aggressive type of breast cancer with a poor prognosis. In this study, it was shown that Meflin can be a candidate marker for rCAFs in TNBC. In co-culture experiments with tumor cells and fibroblasts, Meflin overexpression in fibroblasts inhibited tumor cell growth in a three-dimensional culture model and shifted their gene expression profile toward that characteristic of universal or normal fibroblasts. Meflin overexpression in fibroblasts significantly reduced the expression of the chemokine receptor ACKR3 and enhanced that of the prostaglandin synthase PTGDS. This is suggestive of the involvement of these proteins in tumor microenvironment regulation. Furthermore, Meflin deficiency reduced the area of tumor vessels in a TNBC mouse model, highlighting its role in CAF-mediated inhibition of TNBC progression and improvement of drug delivery. Accordingly, Meflin plays a role as a potential functional marker of rCAFs in TNBC.

最近的研究表明,癌症相关成纤维细胞(CAFs)是肿瘤微环境的关键组成部分,是异质的,可以分为不同的亚群。虽然所有的CAFs都被认为能促进肿瘤进展,但最近的研究已经确定了肿瘤抑制CAFs (rCAFs)的一个特殊子集。我们之前已经证明,Meflin(免疫球蛋白超家族含有丰富亮氨酸重复序列)表达的上调对胰腺癌、结肠癌、尿路上皮和肺癌的CAFs具有肿瘤抑制作用。三阴性乳腺癌(TNBC)是一种侵袭性乳腺癌,预后较差。在这项研究中,我们发现Meflin可以作为TNBC中rcas的候选标记物。在肿瘤细胞和成纤维细胞的共培养实验中,在三维培养模型中,成纤维细胞中Meflin的过表达抑制了肿瘤细胞的生长,并将其基因表达谱转向了通用或正常成纤维细胞的特征。Meflin在成纤维细胞中的过表达显著降低趋化因子受体ACKR3的表达,增强前列腺素合成酶PTGDS的表达。这提示这些蛋白参与肿瘤微环境调节。此外,在TNBC小鼠模型中,Meflin缺乏减少了肿瘤血管的面积,突出了其在cafc介导的TNBC进展抑制和改善药物传递中的作用。因此,Meflin在TNBC中作为rcas的潜在功能标记物发挥作用。
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引用次数: 0
Specialized Pro-Resolving Mediators MaR1 and LXA4 Resolve Inflammation During Acute Chemical Lung Injury in the Absence of Neutrophils 特殊的促溶解介质MaR1和LXA4可在中性粒细胞缺乏的急性化学性肺损伤中缓解炎症。
IF 3.6 2区 医学 Q1 PATHOLOGY Pub Date : 2026-02-01 Epub Date: 2025-10-16 DOI: 10.1016/j.ajpath.2025.09.013
Maureen E. Haynes, Vivienne Fang, Meital Gewirtz, David P. Sullivan, William A. Muller
Gastric aspiration pneumonia involves chemical injury to the alveoli of the lungs with inflammation, tissue damage, and recruitment of polymorphonuclear leukocytes (PMNs). PMNs are also known to be involved in the production of specialized pro-resolving mediators (SPMs), small lipid molecules that contribute to the resolution of inflammation. This study aimed to identify target PMN-produced SPMs and interrogate their actions and potential use for therapeutic treatment after chemical injury. The data revealed that maresin 1 (MaR1), lipoxin A4, and 18-HEPE are produced after chemical injury in the lungs, and that exogenous treatment with these SPMs reduces the acute influx of PMNs into the airspace. In a chemical lung injury model in which neutropenic mice all die within 48 hours, treatment with MaR1 or LXA4 rescued survival of neutropenic mice to the levels of immunologically intact mice, and reduced CD11b expression, a proinflammatory marker, on recruited PMNs. Exogenous treatment with MaR1 or LXA4 reduced the concentration of proinflammatory cytokines TNF⍺, IL6, and MCP-1 in the airspace at 24 hours after injury. These data show that exogenous treatment with MaR1 or LXA4 ameliorates acute inflammation after chemical lung injury and contributes to survival of severe murine aspiration pneumonia in neutropenic animals. These data have implications for treatment of sterile lung injury in immunocompromised patients.
胃吸入性肺炎涉及肺部肺泡的化学损伤,伴有炎症、组织损伤和多形核白细胞(pmn)的募集。pmn还参与产生专门的促溶解介质(SPMs),这是一种有助于炎症消退的小脂质分子。本研究旨在确定目标pmn产生的SPMs,并探讨它们在化学损伤后的作用和潜在的治疗用途。我们的数据显示,肺化学损伤后产生Maresin 1 (MaR1; 7R, 14s -二羟基-二十二酸- 4z,8E,10E,12Z,16Z, 19z -己酸),Lipoxin A4 (LXA4, 5S,6R, 15s -三羟基- 7e,9E,11Z, 13e -二十碳四烯酸)和18-HEPE((±)-18-羟基- 5z,8Z,11Z,14Z, 16e -二十碳五烯酸),外源性处理这些SPMs可减少PMNs急性流入空气中。在化学肺损伤模型中,中性粒细胞减少小鼠在48小时内全部死亡,用MaR1或LXA4治疗使中性粒细胞减少小鼠的存活恢复到免疫完整小鼠的水平,并降低募集PMNs上促炎标志物CD11b的表达。用MaR1或LXA4外源性处理可在损伤后24小时降低空气中促炎细胞因子TNF、IL6和MCP-1的浓度。这些数据表明,用MaR1或LXA4外源性治疗可改善化学肺损伤后的急性炎症,并有助于中性粒细胞减少动物的严重小鼠吸入性肺炎的存活。这些数据对免疫功能低下患者无菌性肺损伤的治疗具有启示意义。
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引用次数: 0
YAP and TEAD Are Transcriptional Regulators of Neuroendocrine Differentiation and Growth in Carcinoid Cells Yap和tead是类癌细胞神经内分泌分化和生长的转录调节因子。
IF 3.6 2区 医学 Q1 PATHOLOGY Pub Date : 2026-02-01 Epub Date: 2025-11-20 DOI: 10.1016/j.ajpath.2025.10.012
Jina Nanayakkara , Xiaojing Yang , Simona Damiani , Tashifa Imtiaz , Xiantao Wang , Dimitrios G. Anastasakis , Girish M. Shah , Kathrin Tyryshkin , Markus Hafner , Xiaolong Yang , Neil Renwick
Molecular regulators of variably aggressive carcinoid tumors are unknown. Since carcinoids have low expression of Yes-associated protein (YAP), it was hypothesized that low YAP expression provides a molecular advantage to carcinoids by preventing YAP from binding its partner, TEA domain transcription factor (TEAD). To test this hypothesis, constitutively active YAP and a TEAD-binding defective form of YAP were overexpressed in lung (H727) and pancreatic (BON1) carcinoid cells. It was found that active YAP overexpression inhibited neuroendocrine markers, morphology, cell proliferation, and anchorage-independent cell growth, whereas TEAD-binding defective YAP recovered these features. Through integrated chromatin immunoprecipitation and RNA sequencing analyses, it was found that YAP-TEAD binding down-regulated neuroendocrine transcription factor genes and up-regulated select transforming growth factor (TGF-β) superfamily and Notch genes related to cell growth. It was concluded that low YAP expression permits neuroendocrine differentiation and growth in carcinoid cells by preventing YAP-TEAD binding and subsequent dysregulation of gene targets. These results identify unknown molecular mechanisms in carcinoid development that may apply to the broader family of neuroendocrine cancers.
不同侵袭性类癌的分子调节因子是未知的。由于类癌具有yes相关蛋白(YAP)的低表达,我们假设YAP的低表达通过阻止YAP与其伴侣TEA结构域转录因子(TEAD)结合而为类癌提供了分子优势。为了验证这一假设,我们在肺(H727)和胰腺(BON1)类癌细胞中过表达构成型活性YAP和tead结合缺陷型YAP。我们发现活跃的YAP过表达抑制神经内分泌标记物、形态学、细胞增殖和不依赖于锚定的细胞生长,而tead结合缺陷的YAP恢复了这些特征。通过ChIP-seq和RNA-seq综合分析,我们发现YAP-TEAD结合下调神经内分泌转录因子基因,上调与细胞生长相关的选择转化生长因子(TGFβ)超家族和Notch基因。我们得出结论,低YAP表达通过阻止YAP- tead结合和随后的基因靶点失调,允许类癌细胞的神经内分泌分化和生长。这些结果确定了类癌发展中未知的分子机制,可能适用于更广泛的神经内分泌癌家族。
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引用次数: 0
Cullin 2 Elevates the Warburg Effect to Accelerate the Development of Hypoxic Pulmonary Hypertension Cullin 2提高Warburg效应,加速低氧性肺动脉高压的发展。
IF 3.6 2区 医学 Q1 PATHOLOGY Pub Date : 2026-02-01 Epub Date: 2025-11-24 DOI: 10.1016/j.ajpath.2025.11.001
Qiufen Xun, Qing Yang, Guofeng Zhu, Wei Wang
Pulmonary arterial hypertension is a disease characterized by abnormally high pulmonary arterial blood pressures caused by a variety of heterogeneous diseases and different pathogenetic mechanisms. This study establishes a hypoxic pulmonary hypertension (HPH) mouse model, revealing cullin 2 (CUL2)'s critical role in disease pathogenesis. Hypoxia up-regulates CUL2 in HPH lungs, whereas CUL2 knockdown alleviates the Warburg effect, right ventricular dysfunction, and pulmonary fibrosis. In vitro, CUL2 depletion suppresses proliferation, adhesion, and tube formation in hypoxic pulmonary arterial endothelial cells. Mechanistically, CUL2 enhances glycolysis by up-regulating lactate dehydrogenase A (LDHA)/phosphofructokinase, liver type (PFKL), and their overexpression rescues CUL2-silencing effects. Furthermore, hypoxia-induced proline hydroxylase 2 (PHD2) down-regulation stabilizes hypoxia-inducible factor-1α (HIF-1α), which directly binds the CUL2 promoter to enhance its expression. These findings unveil a novel PHD2/HIF-1α/CUL2 axis that promotes vascular remodeling via glycolysis, offering a potential therapeutic target for pulmonary arterial hypertension. In conclusion, this work demonstrated that under hypoxia condition, PHD2-mediated hydroxylation of HIF-1α was blocked and the expression of HIF-1α was elevated in HPH mice. High levels of HIF-1α elevated the transcription and expression of CUL2 and increased the Warburg effect, thereby accelerating HPH development.
肺动脉高压(Pulmonary arterial hypertension, PAH)是一种以多种异质性疾病和不同发病机制引起的肺动脉血压异常高为特征的疾病。本研究建立了低氧性肺动脉高压(HPH)小鼠模型,揭示了Cullin 2 (CUL2)在疾病发病机制中的重要作用。缺氧可上调HPH肺中的CUL2,而CUL2下调可减轻Warburg效应、右室功能障碍和肺纤维化。在体外,CUL2缺失抑制缺氧肺动脉内皮细胞(PAECs)的增殖、粘附和管形成。从机制上讲,CUL2通过上调LDHA/PFKL来增强糖酵解,而它们的过表达可以恢复CUL2的沉默作用。此外,缺氧诱导的脯氨酸羟化酶2 (PHD2)下调稳定了缺氧诱导因子-1α (HIF-1α), HIF-1α直接结合CUL2启动子以增强其表达。我们的发现揭示了一个新的PHD2/HIF-1α/CUL2轴,通过糖酵解促进血管重塑,为PAH提供了一个潜在的治疗靶点。综上所述,在缺氧条件下,HPH小鼠中phd2介导的HIF-1α羟基化被阻断,HIF-1α表达升高。高水平的HIF-1α上调CUL2的转录和表达,增加Warburg效应,从而加速HPH的发展。
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引用次数: 0
Improving Colorectal Cancer Screening and Risk Assessment through Predictive Modeling on Medical Images and Records 基于医学影像和记录的预测建模改进结直肠癌筛查和风险评估。
IF 3.6 2区 医学 Q1 PATHOLOGY Pub Date : 2026-02-01 Epub Date: 2025-10-16 DOI: 10.1016/j.ajpath.2025.09.016
Shuai Jiang , Christina Robinson , Joseph Anderson , William Hisey , Lynn Butterly , Arief Suriawinata , Saeed Hassanpour
Colonoscopy screening effectively identifies and removes polyps before they progress to colorectal cancer (CRC), but current follow-up guidelines rely primarily on histopathologic features, overlooking other important CRC risk factors. Variability in polyp characterization among pathologists also hinders consistent surveillance decisions. Advances in digital pathology and deep learning enable the integration of pathology slides and medical records for more accurate progression risk prediction. Using data from the New Hampshire Colonoscopy Registry, including longitudinal follow-up, a transformer-based model for histopathology image analysis was adapted to predict 5-year progression risk. Multi-modal fusion strategies were further explored to combine clinical records with deep learning–derived image features. Training the model to predict intermediate clinical variables improved 5-year progression risk prediction [area under the receiver-operating characteristic curve (AUC), 0.630] compared with direct prediction (AUC, 0.615; P = 0.013). Integrating whole-slide imaging–based model predictions with nonimaging features further improved performance (AUC, 0.672), significantly outperforming the nonimaging-only approach (AUC, 0.666; P = 0.002). These results highlight the value of integrating diverse data modalities with computational methods to enhance progression risk stratification.
结肠镜筛查可以有效地在息肉发展为结直肠癌(CRC)之前识别并切除息肉,但目前的随访指南主要依赖于组织病理学特征,忽略了其他重要的CRC危险因素。病理学家之间息肉特征的差异也阻碍了一致的监测决策。数字病理学和深度学习的进步使病理切片和医疗记录的整合能够更准确地预测进展风险。利用新罕布什尔结肠镜登记中心的数据,包括纵向随访,采用基于变压器的组织病理学图像分析模型来预测5年进展风险。进一步探索多模式融合策略,将临床记录与深度学习衍生的图像特征相结合。与直接预测(AUC = 0.615, p = 0.013)相比,训练模型预测中间临床变量可提高5年进展风险预测(AUC = 0.630)。将基于wsi的模型预测与非成像特征相结合进一步提高了性能(AUC = 0.672),显著优于仅非成像方法(AUC = 0.666, p = 0.002)。这些结果强调了将不同数据模式与计算方法相结合以增强进展风险分层的价值。
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引用次数: 0
Periostin Deletion Reduces Corneal Opacity and the Infiltration of Immune Cells 骨膜蛋白缺失可减少角膜混浊和免疫细胞浸润。
IF 3.6 2区 医学 Q1 PATHOLOGY Pub Date : 2026-02-01 Epub Date: 2025-09-30 DOI: 10.1016/j.ajpath.2025.09.007
Hyemin Seong , Chieun Song , Mingyo Kim , Woong-Sun Yoo , Mee-Young Choi , Réka Dorottya Varga , Yong-Ho Choe , Bina Lee , Seung Pil Yun , Young-Sik Yoo , Youngsub Eom , Choun-Ki Joo , Jinsung Yang , Seong-Jae Kim
Corneal opacity resulting from corneal injury is a leading cause of blindness. The interaction of extracellular matrix (ECM) proteins, cytokines, and immune cells induces corneal opacity after corneal injury. Periostin, which is secreted into the ECM, is involved in wound healing and is associated with immune cell infiltration. The function of periostin in corneal wound healing and in the development of corneal opacity was investigated. Wild-type (WT) and Postn knockout (KO) mice underwent central corneal incision. Periostin expression level was significantly increased after the incision in WT mice, correlating with higher levels of wound healing markers, such as fibronectin and α-smooth muscle actin, and increased corneal opacity. However, Postn KO mice showed reduced corneal opacity and immune cell infiltration, particularly from myeloid lineage cells after incision. In addition, pro-inflammatory cytokine levels (IL-1β, IL-6, and C1q) were not significantly changed in Postn KO mice. The results suggest that periostin deletion impairs corneal wound healing and reduces opacity by regulating cytokine expression and immune cell recruitment. The findings indicate that periostin can be a potential therapeutic target for reducing corneal opacity.
角膜损伤引起的角膜混浊是导致失明的主要原因。细胞外基质(ECM)蛋白、细胞因子和免疫细胞的相互作用诱导角膜损伤后角膜混浊。骨膜蛋白分泌到ECM中,参与伤口愈合并与免疫细胞浸润有关。探讨了骨膜素在角膜创面愈合和角膜混浊形成中的作用。野生型(WT)和Postn敲除(KO)小鼠进行角膜中央切口。WT小鼠切口后骨膜蛋白表达水平显著升高,与纤维连接蛋白、α-SMA等创面愈合标志物水平升高、角膜混浊增加相关。然而,术后KO小鼠显示角膜混浊和免疫细胞浸润减少,尤其是骨髓系细胞。此外,促炎细胞因子(IL-1β、IL-6、C1q)水平在KO后小鼠中没有显著变化。结果表明,骨膜蛋白缺失通过调节细胞因子表达和免疫细胞募集,影响角膜创面愈合,减少角膜不透明。研究结果表明,骨膜蛋白可作为降低角膜混浊的潜在治疗靶点。
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引用次数: 0
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American Journal of Pathology
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