Surface irrigation, despite its relatively simple design and lower costs compared to pressurized systems, still faces challenges such as water loss and non-uniform moisture distribution. The SCS method, as one of the widely used surface irrigation design methods, has not yet benefited from the necessary improvements and adaptations to improve performance. In this study, a simulation–optimization model for the optimal design of basin irrigation was developed to improve hydraulic performance using the MATLAB programming software. In the simulation part of the model, the SCS method was modified, and in the optimization part, the Grey Wolf Optimizer (GWO) meta-heuristic algorithm was employed. By implementing changes in the inputs and outputs of the SCS method, and enhancing the calculations, more accurate and more coordinated optimization with real conditions was enabled. These modifications included converting the basin length into a decision variable during the optimization process, and improving calculations related to advance time, infiltrated water depth, cutoff, depletion and recession times, as well as infiltrated water volume, and deep percolation at different points of the basin. The results of optimization after simulation of basin irrigation design in the experimental field demonstrated positive effects of optimization on performance indicators such as Application Efficiency (Ea), Distribution Uniformity (DU), and Requirement Efficiency (Er). In the initial design, despite considerable deep percolation and relatively long advance time, the Ea was 61% and DU was 84%. However, after optimization, changes in the basin length and discharge variables led to reductions in advance time and cutoff time, resulting in a 27% decrease in the Deep Percolation Ratio (DPR), and a 13% increase in DU. Additionally, with reductions in water consumption volume and deep percolation, Ea improved by 27%. The objective function value decreased (improved) from 0.93 in the initial design to 0.22 in the optimized design, indicating a significant improvement in irrigation system efficiency. These changes were mainly achieved by reducing the basin length, and increasing discharge to reduce advance time, which proved to be the primary effective strategy in the optimized condition. The results also indicated that variations in basin length had a greater impact than discharge values in achieving the optimal state. Overall, the developed model was capable of providing a framework for the optimal design of basin irrigation.