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A microfluidic system for the cultivation of cyanobacteria with precise light intensity and CO2 control: Enabling growth data acquisition at single-cell resolution. 用于培养蓝藻的微流体系统,可精确控制光照强度和二氧化碳浓度:以单细胞分辨率获取生长数据。
IF 6.1 2区 工程技术 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-30 DOI: 10.1039/d4lc00567h
Lennart Witting, Johannes Seiffarth, Birgit Stute, Tim Schulze, Jan Matthis Hofer, Katharina Nöh, Marion Eisenhut, Andreas Weber, Eric von Lieres, Dietrich Kohlheyer
Quantification of cell growth is central to any study of photoautotrophic microorganisms. However, cellular self-shading and limited CO2 control in conventional photobioreactors lead to heterogeneous conditions that obscure distinct correlations between the environment and cellular physiology. Here we present a microfluidic cultivation platform that enables precise analysis of cyanobacterial growth with spatio-temporal resolution. Since cyanobacteria are cultivated in monolayers, cellular self-shading does not occur, allowing homogeneous illumination and precise knowledge of the photonflux density at single-cell resolution. A single chip contains multiple channels, each connected to several hundred growth chambers. In combination with an externally applied light gradient, this setup enables high-throughput multi-parameter analysis in short time. In addition, the multilayered microfluidic design allows continuous perfusion of defined gas mixtures. Transversal CO2 diffusion across the intermediate polydimethylsiloxane membrane results in homogeneous CO2 supply, with a unique exchange-surface to cultivation-volume ratio. Three cyanobacterial model strains were examined under various, static and dynamic environmental conditions. Phase-contrast and chlorophyllfluorescence images were recorded by automated time-lapse microscopy. Deep-learning trained cell segmentation was used to efficiently analyse large image stacks, thereby generating statistically reliable data. Cell division was highly synchronized, and growth was robust under continuous illumination but stopped rapidly upon initiating dark phases. CO2-limitation, often a limiting factor in photobioreactors, was only observed when the device was operated under reduced CO2 between 50 and 0 ppm. Here we provide comprehensive and precise data on cyanobacterial growth at single-cell resolution, accessible for further growth studies and modeling.
细胞生长的定量化是任何光自养微生物研究的核心。然而,在传统的光生物反应器中,细胞自遮光和有限的二氧化碳控制会导致条件不均,从而掩盖了环境与细胞生理之间的明显相关性。在这里,我们介绍了一种微流控培养平台,该平台能以时空分辨率对蓝藻的生长进行精确分析。由于蓝藻是单层培养的,因此不会出现细胞自遮光现象,从而实现了均匀光照,并能以单细胞分辨率精确了解光通量密度。单个芯片包含多个通道,每个通道连接数百个生长室。结合外部施加的光梯度,该装置可在短时间内进行高通量多参数分析。此外,多层微流体设计还允许连续灌注确定的混合气体。二氧化碳在中间聚二甲基硅氧烷膜上的横向扩散可实现均匀的二氧化碳供应,并具有独特的交换面与培养体积比。在各种静态和动态环境条件下,对三种蓝藻模式菌株进行了研究。通过自动延时显微镜记录了相位对比和叶绿素荧光图像。利用经过深度学习训练的细胞分割技术有效地分析了大量图像堆栈,从而生成了统计上可靠的数据。细胞分裂高度同步,在持续光照下生长旺盛,但在黑暗阶段开始时生长会迅速停止。二氧化碳限制通常是光生物反应器中的一个限制因素,但只有在二氧化碳浓度降低到 50 至 0 ppm 时才会观察到这一限制。我们在此提供了单细胞分辨率下蓝藻生长的全面而精确的数据,可用于进一步的生长研究和建模。
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引用次数: 0
Surface modification of paper-based microfluidic devices via initiated chemical vapor deposition 通过化学气相沉积对纸质微流控设备进行表面改性
IF 6.1 2区 工程技术 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-30 DOI: 10.1039/D4LC00414K
Stacey Bacheller and Malancha Gupta

Paper-based microfluidic devices offer an ideal platform for biological and environmental detection because they are low-cost, small, disposable, and fill by natural capillary action. In this tutorial review, we discuss the surface modification of paper-based microfluidic devices with functional polymers using the initiated chemical vapor deposition (iCVD) process. The iCVD process is solventless and therefore ideal for coating cellulose paper because there are no surface tension effects or solvent compatibility issues. The process can also be scaled up for roll-to-roll manufacturing. The chemical functionality of the iCVD coating can be tuned by varying the monomer and the structure of the coating can be tuned by varying the processing parameters.

纸基微流体设备成本低、体积小、可一次性使用,并可通过自然毛细作用进行填充,因此为生物和环境检测提供了理想的平台。在这篇教程综述中,我们将讨论利用引发化学气相沉积(iCVD)工艺用功能聚合物对纸基微流控设备进行表面改性的问题。iCVD 工艺无溶剂,因此是纤维素纸涂层的理想选择,因为它不存在表面张力效应或溶剂兼容性问题。该工艺还可以放大,用于卷对卷生产。iCVD 涂层的化学功能可通过改变单体来调整,涂层的结构可通过改变加工参数来调整。
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引用次数: 0
High-throughput selection of sperm with improved DNA integrity and rapidly progressive motility using a butterfly-shaped chip compared to the swim-up method† 与游动法相比,使用蝶形芯片高通量筛选出的精子具有更好的 DNA 完整性和快速的运动能力。
IF 6.1 2区 工程技术 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-24 DOI: 10.1039/D4LC00506F
Ali Sharafatdoust Asl, Mohammad Zabetian Targhi, Soroush Zeaei, Iman Halvaei and Reza Nosrati

Microfluidics provides unique opportunities for the high throughput selection of motile sperm with improved DNA integrity for assisted reproductive technologies (ARTs). Here, through a parametric study on dimensions and geometrical angles, a butterfly-shaped chip (BSC) is presented to isolate sperm with high progressive motility and intact DNA at a separation rate of 1125 sperm per minute. Using finite element simulations, the flow field and shear rates in the device were optimized to leverage the inherent motility characteristics of sperm for maximum selection throughput. The device incorporates a triple selection mechanism in series, initially activating sperm rheotaxis by rotation against the semen flow, penetrating the counter buffer flow and swimming against the direction of the buffer flow, leaving dead cells and debris behind, and subsequently leveraging boundary-following behavior to direct progressively motile sperm to swim along the walls and reach the device outlet. The device selects over 4.1 million sperm per mL within 20 minutes, with 29.2%, 68.2%, and 57.3% improvement in total motility, DNA integrity, and velocity parameter (VCL), as compared with the conventional swim-up method, respectively. Overall, the performance of the device to separate sperm with approximately 95.9% total motility, 97.8% viability, and 96.6% DNA integrity at high concentrations demonstrates its potential for enhancing the efficiency of conventional treatment methods.

微流控技术为辅助生殖技术(ART)提供了独特的机会,可高通量筛选出具有更好 DNA 完整性的活力精子。本文通过对尺寸和几何角度的参数研究,介绍了一种蝶形芯片(BSC),它能以每分钟 1125 个精子的分离率分离出具有高渐进运动能力和完整 DNA 的精子。通过有限元模拟,对设备中的流场和剪切率进行了优化,以利用精子固有的运动特性实现最大的选择吞吐量。该装置采用了三重串联选择机制,最初通过逆精液流旋转激活精子流变性,穿透反向缓冲流并逆缓冲流方向游动,将死细胞和碎片留在后面,随后利用边界跟随行为引导逐渐活跃的精子沿装置壁游动并到达装置出口。在 20 分钟内,该装置每毫升可筛选出超过 410 万个精子,与传统的游动法相比,总活力、DNA 完整性和速度参数(VCL)分别提高了 29.2%、68.2% 和 57.3%。总体而言,该装置能在高浓度下分离出总活力约为 95.9%、存活率约为 97.8%、DNA 完整性约为 96.6% 的精子,这表明它具有提高传统治疗方法效率的潜力。
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引用次数: 0
Inertial co-focusing of heterogeneous particles in hybrid microfluidic channels with constantly variable cross-sections† 异质颗粒在横截面不断变化的混合微流体通道中的惯性共同聚焦
IF 6.1 2区 工程技术 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-24 DOI: 10.1039/D4LC00479E
Tianwei Zhao, Peng Zeng, Yuanting Zhang, Jinxia Li, Hui Sun, Imrich Gablech, Honglong Chang, Xichen Yuan, Pavel Neužil and Jianguo Feng

Heterogeneous particles co-focusing to a single stream is a vital prerequisite for cell counting and enumeration, playing an essential role in flow cytometry and single-cell analysis. Microfluidics-based inertial focusing holds great research prospects due to its simplicity of devices, ease of operation, high throughput, and freedom from external fields. Combining microfluidic channels with two or more different geometries has become a powerful tool for high-efficiency particle focusing. Here, we explored hybrid microfluidic channels for heterogeneous particle co-focusing. Four different annular channels with obstacles distributed on the inner wall were constructed and simulated, obtaining constantly variable secondary flows. Then we used four different fluorescent particles with the size of 10 μm, 12 μm 15 μm, and 20 μm as well as their mixture to perform the inertial focusing experiments of multi-sized particles. Theoretical simulation and experimental results demonstrated a focusing efficiency of >99%. Finally, we further utilized human white blood cells to estimate the co-focusing performance of our hybrid microfluidic channel, resulting in a high focusing efficiency of >92% and a high throughput of ≈8000 cell s−1. The hybrid microfluidic channels, capable of high-precision heterogeneous particle co-focusing, could pave a broad avenue for microfluidic flow cytometry and single-cell analysis.

将异质颗粒共同聚焦成单一流是细胞计数和枚举的重要先决条件,在流式细胞仪和单细胞分析中发挥着重要作用。基于微流控技术的惯性聚焦因其设备简单、操作方便、高通量和不受外部场干扰等优点而具有广阔的研究前景。结合两种或两种以上不同几何形状的微流体通道已成为高效粒子聚焦的有力工具。在这里,我们探索了用于异质粒子共聚焦的混合微流体通道。我们构建并模拟了由内壁分布有障碍物的环形通道组成的四种不同通道结构,获得了不断变化的二次流。然后,我们使用 10 μm、12 μm 15 μm、20 μm 四种不同尺寸的荧光颗粒及其混合物进行了多尺寸颗粒的惯性聚焦实验。理论模拟和实验结果表明,聚焦效率高达 99%。最后,我们利用人体白细胞进一步评估了混合微流控通道的协同聚焦性能,结果显示聚焦效率高达92%,通量≈8,000 cells-s-1。这种能够实现高精度异质颗粒共聚焦的混合微流控通道将为微流控流式细胞仪和单细胞分析开辟一条广阔的道路。
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引用次数: 0
3D printing of monolithic gravity-assisted step-emulsification device for scalable production of high viscosity emulsion droplets† 三维打印用于规模化生产高粘度乳液液滴的整体重力辅助阶跃乳化装置
IF 6.1 2区 工程技术 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-23 DOI: 10.1039/D4LC00650J
Yoon-Ho Hwang, Je Hyun Lee, Taewoong Um and Hyomin Lee

Microfluidic technology widely used in generating monodisperse emulsion droplets often suffers from complexity, scalability, applicability to practical fluids, as well as operation instability due to its susceptibility to flow perturbations, low clearance, and depletion of surfactants. Herein, we present a monolithic 3D-printed step-emulsification device (3D-PSD) for scalable and robust production of high viscosity emulsion droplets up to 208.16 mPa s, which cannot be fully addressed using conventional step-emulsification devices. By utilizing stereo-lithography (SLA), 24 triangular nozzles with a pair of 3D void flow distributors are integrated within the 3D-PSD to ensure uniform flow distribution followed by monodisperse droplet formation. The outlets positioned vertically downward enables gravity-assisted clearing to prevent droplet accumulation and thereby maintain size monodispersity. Deposition of silica nanoparticles (SiNP) within the device was also shown to alter the surface wettability from hydrophobic to hydrophilic, enabling the production of both water-in-oil (W/O) as well as oil-in-water (O/W) emulsion droplets, operated at a maximum production rate of up to 50 mL h−1. The utility of the device is further verified through continuous production of biodegradable polycaprolactone (PCL) microparticles using O/W emulsion as templates. We envision that the 3D-PSD presented in this work marks a significant leap in high-throughput production of high viscosity emulsion droplets as well as the particle analogs.

广泛用于生成单分散乳液液滴的微流体技术往往存在复杂性、可扩展性、对实际流体的适用性以及因易受流动扰动、低间隙和表面活性剂耗竭而导致的操作不稳定性等问题。在此,我们提出了一种整体三维打印阶跃乳化装置(3D-PSD),用于可扩展、稳健地生产高达 208.16 mPa-s 的高粘度乳液液滴,而传统的阶跃乳化装置无法完全解决这一问题。通过使用立体光刻技术(SLA),24 个三角形喷嘴与一对三维空隙流分配器集成在 3D-PSD 中,以确保均匀的流量分布和单分散液滴的形成。垂直向下设置的出口可在重力辅助下清除液滴,防止液滴堆积,从而保持尺寸的单分散性。在该装置中沉积二氧化硅纳米颗粒 (SiNP) 还可将表面润湿性从疏水性变为亲水性,从而能够产生油包水型 (W/O) 和水包油型 (O/W) 乳液液滴,最大生产率可达 50 mL/h-1。以 O/W 型乳液为模板连续生产可生物降解的聚己内酯(PCL)微粒,进一步验证了该装置的实用性。我们认为,这项工作中提出的 3D-PSD 标志着高粘度乳液液滴以及颗粒类似物的高通量生产方面的一次重大飞跃。
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引用次数: 0
Artificial intelligence performance in testing microfluidics for point-of-care† 人工智能在医疗点微流控测试中的表现
IF 6.1 2区 工程技术 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-20 DOI: 10.1039/D4LC00671B
Mert Tunca Doganay, Purbali Chakraborty, Sri Moukthika Bommakanti, Soujanya Jammalamadaka, Dheerendranath Battalapalli, Anant Madabhushi and Mohamed S. Draz

Artificial intelligence (AI) is revolutionizing medicine by automating tasks like image segmentation and pattern recognition. These AI approaches support seamless integration with existing platforms, enhancing diagnostics, treatment, and patient care. While recent advancements have demonstrated AI superiority in advancing microfluidics for point of care (POC) diagnostics, a gap remains in comparative evaluations of AI algorithms in testing microfluidics. We conducted a comparative evaluation of AI models specifically for the two-class classification problem of identifying the presence or absence of bubbles in microfluidic channels under various imaging conditions. Using a model microfluidic system with a single channel loaded with 3D transparent objects (bubbles), we challenged each of the tested machine learning (ML) (n = 6) and deep learning (DL) (n = 9) models across different background settings. Evaluation revealed that the random forest ML model achieved 95.52% sensitivity, 82.57% specificity, and 97% AUC, outperforming other ML algorithms. Among DL models suitable for mobile integration, DenseNet169 demonstrated superior performance, achieving 92.63% sensitivity, 92.22% specificity, and 92% AUC. Remarkably, DenseNet169 integration into a mobile POC system demonstrated exceptional accuracy (>0.84) in testing microfluidics at under challenging imaging settings. Our study confirms the transformative potential of AI in healthcare, emphasizing its capacity to revolutionize precision medicine through accurate and accessible diagnostics. The integration of AI into healthcare systems holds promise for enhancing patient outcomes and streamlining healthcare delivery.

通过自动完成图像分割和模式识别等任务,人工智能(AI)正在彻底改变医学。这些人工智能方法支持与现有平台的无缝集成,增强了诊断、治疗和患者护理的能力。虽然最近的进步已经证明了人工智能在推动微流体技术用于医疗点诊断方面的优势,但在测试微流体技术的人工智能算法比较评估方面仍存在差距。我们对人工智能模型进行了比较评估,特别是针对在各种成像条件下识别微流体通道中是否存在气泡的两类分类问题。利用一个装有三维透明物体(气泡)的单通道模型微流控系统,我们在不同的背景设置下对每个测试过的机器学习(ML)(n = 6)和深度学习(DL)(n = 9)模型进行了挑战。评估结果显示,随机森林 ML 模型的灵敏度为 95.52%,特异度为 82.57%,AUC 为 97%,优于其他 ML 算法。在适用于移动集成的 DL 模型中,DenseNet169 表现出色,灵敏度达到 92.63%,特异度达到 92.22%,AUC 达到 92%。值得注意的是,DenseNet169 集成到移动 POC 系统后,在具有挑战性的成像环境下测试微流体时,表现出了极高的准确性(0.84)。我们的研究证实了人工智能在医疗保健领域的变革潜力,强调了其通过准确、便捷的诊断彻底改变精准医疗的能力。将人工智能融入医疗保健系统有望提高患者的治疗效果并简化医疗保健服务。
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引用次数: 0
Vibration mixing for enhanced paper-based recombinase polymerase amplification† 振动混合增强纸基重组酶聚合酶扩增。
IF 6.1 2区 工程技术 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-20 DOI: 10.1039/D4LC00592A
Kelli N. Shimazu, Andrew T. Bender, Per G. Reinhall and Jonathan D. Posner

Isothermal nucleic acid amplification tests (NAATs) are a vital tool for point-of-care (POC) diagnostics. These assays are well-suited for rapid, low-cost POC diagnostics for infectious diseases compared to traditional PCR tests conducted in central laboratories. There has been significant development of POC NAATs using paper-based diagnostic devices because they provide an affordable, user-friendly, and easy to store format; however, the difficulties in integrating separate liquid components, resuspending dried reagents, and achieving a low limit of detection hinder their use in commercial applications. Several studies report low assay efficiencies, poor detection output, and poorer limits of detection in porous membranes compared to traditional tube-based protocols. Recombinase polymerase amplification is a rapid, isothermal NAAT that is highly suited for POC applications, but requires viscous reaction conditions that has poor performance when amplifying in a porous paper membrane. In this work, we show that we can dramatically improve the performance of membrane-based recombinase polymerase amplification (RPA) of HIV-1 DNA and viral RNA by employing a coin cell-based vibration mixing platform. We achieve a limit of detection of 12 copies of DNA per reaction, nearly 50% reduction in time to threshold (from ∼10 minutes to ∼5 minutes), and an overall fluorescence output increase up to 16-fold when compared to unmixed experiments. This active mixing strategy enables reactions where the target and reaction cofactors are isolated from each other prior to the reaction. We also demonstrate amplification using a low-cost vibration motor for both temperature control and mixing, without the requirement of any additional heating components.

等温核酸扩增检测(NAAT)是床旁诊断(POC)的重要工具。与在中心实验室进行的传统 PCR 检测相比,这些检测方法非常适合用于快速、低成本的 POC 诊断传染病。使用纸质诊断设备的 POC NAAT 已经得到了长足的发展,因为它们价格低廉、使用方便、易于储存;然而,在整合独立的液体成分、重新悬浮干燥试剂以及实现低检测限等方面存在的困难阻碍了它们在商业应用中的使用。一些研究报告称,与传统的管式方案相比,多孔膜的检测效率低、检测输出差、检测限也更低。重组酶聚合酶扩增是一种快速、等温的 NAAT,非常适合 POC 应用,但需要粘稠的反应条件,在多孔纸膜中扩增时性能较差。在这项工作中,我们展示了通过采用基于纽扣细胞的振动混合平台,我们可以显著提高基于膜的重组酶聚合酶扩增(RPA)对 HIV-1 DNA 和病毒 RNA 的性能。与未经混合的实验相比,我们实现了每个反应 12 个 DNA 拷贝的检测限,阈值时间缩短了近 50%(从 10 分钟到 5 分钟),整体荧光输出增加了 16 倍。这种主动混合策略使目标物和反应辅因子能够在反应前相互隔离。我们还展示了使用低成本振动电机进行温度控制和混合的放大效果,无需任何额外的加热元件。
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引用次数: 0
Label-free single-cell antimicrobial susceptibility testing in droplets with concentration gradient generation 利用浓度梯度生成技术在液滴中进行无标记单细胞抗菌药物敏感性测试
IF 6.1 2区 工程技术 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-20 DOI: 10.1039/d4lc00629a
Jae Seong Kim, Jingyeong Kim, Jae-Seok Kim, Wooseong Kim, Chang-Soo Lee
Bacterial communities exhibit significant heterogeneity, resulting in the emergence of specialized phenotypes that can withstand antibiotic exposure. Unfortunately, the existence of subpopulations resistant to antibiotics often goes unnoticed during treatment initiation. Thus, it is crucial to consider the concept of single-cell antibiotic susceptibility testing (AST) to tackle bacterial infections. Nevertheless, its practical application in clinical settings is hindered by its inability to conduct AST efficiently across a wide range of antibiotics and concentrations. This study introduces a droplet-based microfluidic platform designed for rapid single-cell AST by creating an antibiotic concentration gradient. The advantage of a microfluidic platform is achieved by executing bacteria and antibiotic mixing, cell encapsulation, incubation, and enumeration of bacteria in a seamless workflow, facilitating susceptibility testing of each antibiotic. Firstly, we demonstrate the rapid determination of minimum inhibitory concentration (MIC) of several antibiotics with Gram-negative E. coli and Gram-negative S. aureus, which enables us to bypass the time-consuming bacteria cultivation, speeding up the AST in 3 hrs from 1 – 2 days of conventional methods. Additionally, we assess 10 clinical isolates including methicillin-resistant Staphylococcus aureus (MRSA) and multidrug-resistant Staphylococcus aureus (MDRSA) against clinically important antibiotics for analyzing MIC, compared to the gold standard AST method from the United States Clinical and Laboratory Standards Institute (CLSI), which becomes available only after 48 h. Furthermore, by monitoring single cells within individual droplets, we have found a spectrum of resistance levels among genetically identical cells, revealing phenotypic heterogeneity within isogenic populations. This discovery not only advances clinical diagnostics and treatment strategies but also significantly contributes to the field of antibiotic stewardship, underlining the importance of our approach in addressing bacterial resistance.
细菌群落表现出明显的异质性,从而产生了能够耐受抗生素暴露的特化表型。不幸的是,对抗生素具有耐药性的亚群的存在往往在开始治疗时被忽视。因此,考虑用单细胞抗生素药敏试验(AST)的概念来解决细菌感染问题至关重要。然而,单细胞抗生素药敏试验无法在多种抗生素和浓度下有效进行,这阻碍了它在临床环境中的实际应用。本研究介绍了一种基于液滴的微流控平台,旨在通过创建抗生素浓度梯度来实现快速单细胞 AST。微流控平台的优势在于能在一个无缝的工作流程中完成细菌和抗生素的混合、细胞包被、培养和细菌计数,从而为每种抗生素的药敏试验提供便利。首先,我们演示了用革兰氏阴性大肠杆菌和革兰氏阴性金黄色葡萄球菌快速测定几种抗生素的最低抑菌浓度(MIC),这使我们能够绕过耗时的细菌培养,将传统方法需要 1-2 天的 AST 缩短到 3 小时。此外,与美国临床和实验室标准协会(CLSI)的金标准 AST 方法(48 小时后才可使用)相比,我们对 10 种临床分离物(包括耐甲氧西林金黄色葡萄球菌(MRSA)和耐多药金黄色葡萄球菌(MDRSA))进行了评估,以分析其对临床重要抗生素的 MIC。此外,通过监测单个液滴中的单细胞,我们发现了基因相同的细胞之间的耐药性水平谱,揭示了同源群体中的表型异质性。这一发现不仅推进了临床诊断和治疗策略,还极大地促进了抗生素管理领域的发展,凸显了我们的方法在解决细菌耐药性问题上的重要性。
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引用次数: 0
Dynamic sampling from ex vivo adipose tissue using droplet-based microfluidics supports separate mechanisms for glycerol and fatty acid secretion† 利用液滴微流控技术从体内外脂肪组织动态取样,支持甘油和脂肪酸的独立分泌机制
IF 6.1 2区 工程技术 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-20 DOI: 10.1039/D4LC00664J
Md Moniruzzaman, Andresa B. Bezerra, Md Mohibullah, Robert L. Judd, James G. Granneman and Christopher J. Easley

Pathologies in adipose (fat) tissue function are linked with human diseases such as diabetes, obesity, metabolic syndrome, and cancer. Dynamic, rapid release of metabolites has been observed in adipocyte cells and tissue, yet higher temporal resolution is needed to adequately study this process. In this work, a microfluidic device with precise and regular valve-automated droplet sampling, termed a microfluidic analog-to-digital converter (μADC), was used to sample secretions from ∼0.75 mm diameter adipose explants from mice, and on-chip salt water electrodes were used to merge sampled droplets with reagent droplets from two different fluorometric coupled enzyme assays. By integrating sampling and assays on-chip, either glycerol or non-esterified fatty acids (NEFA), or both, were quantified optically within merged 12 nanoliter droplets using a fluorescence microscope with as high as 20 second temporal resolution. Limits of detection were 6 μM for glycerol (70 fmol) and 0.9 μM for NEFA (10 fmol). Multiple ex vivo adipose tissue explants were analyzed with this system, all showing clear increases in lipolytic function after switching from feeding to fasting conditions. Enabled by high temporal resolution, lipolytic oscillations of both glycerol and NEFA were observed for the first time in the range of 0.2 to 1.6 min−1. Continuous wavelet transform (CWT) spectrograms and burst analyses (0.1 to 4.0 pmol bursts) revealed complex dynamics, with multiplexed assays (duplex for glycerol and NEFA) from the same explants showing mostly discordant bursts. These data support separate mechanisms of NEFA and glycerol release, although the connection to intracellular metabolic oscillations remains unknown. Overall, this device allowed automated and highly precise temporal sampling of tissue explants at high resolution and programmable downstream merging with multiple assay reagents, revealing unique biological information. Such device features should be applicable to various other tissue or spheroid types and to other assay formats.

脂肪组织功能的病变与糖尿病、肥胖症、代谢综合征和癌症等人类疾病有关。在脂肪细胞和组织中已观察到代谢物的动态快速释放,但要充分研究这一过程,还需要更高的时间分辨率。在这项工作中,我们使用了一种具有精确和规则阀门自动液滴采样功能的微流控装置(称为微流控模拟数字转换器(µADC)),对小鼠直径约 0.75 毫米的脂肪外植体的分泌物进行采样,并使用片上盐水电极将采样液滴与两种不同荧光耦合酶测定法的试剂液滴合并。通过在芯片上整合取样和检测,使用荧光显微镜对合并的 12 纳升液滴中的甘油或非酯化脂肪酸 (NEFA) 或两者进行光学定量,时间分辨率高达 20 秒。甘油(70 fmol)的检测限为 6 µM,NEFA(10 fmol)的检测限为 0.9 µM。利用该系统对多个体外脂肪组织外植体进行了分析,结果表明,从进食条件转换到禁食条件后,脂肪分解功能明显增强。通过高时间分辨率,首次观察到甘油和 NEFA 在 0.2 至 1.6 min-1 范围内的脂肪分解振荡。连续小波变换(CWT)频谱图和猝发分析(0.1 至 4.0 pmol 猝发)揭示了复杂的动态变化,来自同一外植体的多重检测(甘油和 NEFA 双重检测)显示出大部分不一致的猝发。这些数据支持 NEFA 和甘油释放的不同机制,但与细胞内代谢振荡的联系仍不清楚。总之,该装置能以高分辨率对组织外植体进行自动化、高精度的时间采样,并可编程地与多种检测试剂进行下游合并,从而揭示独特的生物信息。这种装置的特点应适用于其他各种组织或球体类型以及其他检测格式。
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引用次数: 0
Label-free high-throughput impedance-activated cell sorting† 无标记高通量阻抗激活细胞分拣技术
IF 6.1 2区 工程技术 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-20 DOI: 10.1039/D4LC00487F
Kui Zhang, Ziyang Xia, Yiming Wang, Lisheng Zheng, Baoqing Li and Jiaru Chu

Cell sorting holds broad applications in fields such as early cancer diagnosis, cell differentiation studies, drug screening, and single-cell sequencing. However, achieving high-throughput and high-purity in label-free single-cell sorting is challenging. To overcome this issue, we propose a label-free, high-throughput, and high-accuracy impedance-activated cell sorting system based on impedance detection and dual membrane pumps. Leveraging the low-latency characteristics of FPGA, the system facilitates real-time dual-frequency single-cell impedance detection with high-throughput (5 × 104 cells per s) for HeLa, MDA-MB-231, and Jurkat cells. Furthermore, the system accomplishes low-latency (less than 0.3 ms), label-free, high-throughput (1000 particles per s) and high-accuracy (almost 99%) single-particle sorting using FPGA-based high-precision sort-timing prediction. In experiments with Jurkat and MDA-MB-231 cells, the system achieved a throughput of up to 1000 cells per s, maintaining a pre-sorting purity of 28.57% and increasing post-sorting purity to 97.09%. These findings indicate that our system holds significant potential for applications in label-free, high-throughput cell sorting.

细胞分拣在早期癌症诊断、细胞分化研究、药物筛选和单细胞测序等领域有着广泛的应用。然而,在无标记单细胞分选中实现高通量和高纯度具有挑战性。为了克服这一问题,我们提出了一种基于阻抗检测和双膜泵的无标记、高通量和高精度阻抗激活细胞分拣系统。利用 FPGA 的低延迟特性,该系统可对 Hela、MDA-MB-231 和 Jurkat 细胞进行高通量(5 × 104 cells/s)的实时双频单细胞阻抗检测。此外,该系统还利用基于 FPGA 的高精度分拣时间预测,实现了低延迟(小于 0.3 毫秒)、无标记、高通量(1,000 颗粒/秒)和高准确度(近 99%)的单颗粒分拣。在对 Jurkat 和 MDA-MB-231 细胞的实验中,该系统实现了高达 1,000 cells/s 的吞吐量,分选前纯度保持在 28.57%,分选后纯度提高到 97.09%。这些研究结果表明,我们的系统在无标记、高通量细胞分选方面具有巨大的应用潜力。
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Lab on a Chip
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