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Foreword to the Astrobiology Primer 3.0. 天体生物学入门 3.0》前言。
IF 4.2 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-03-01 DOI: 10.1089/ast.2023.0116
Lucas Mix
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引用次数: 0
Life Is Uncertain: Inherent Variability Exhibited by Organisms, and at Higher Levels of Biological Organization. 生命是不确定的:生物体和更高层次生物组织固有的变异性。
IF 4.2 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-03-01 Epub Date: 2024-02-13 DOI: 10.1089/ast.2023.0094
Joseph W Bull

Organisms act stochastically. A not uncommon view in the ecological literature is that this is mainly due to the observer having insufficient information or a stochastic environment-and not partly because organisms themselves respond with inherent unpredictability. In this study, I compile the evidence that contradicts that view. Organisms generate uncertainty internally, which results in irreducible stochastic responses. I consider why: for instance, stochastic responses are associated with greater adaptability to changing environments and resource availability. Over longer timescales, biologically generated uncertainty influences behavior, evolution, and macroecological processes. Indeed, it could be stated that organisms are systems defined by the internal generation, magnification, and record-keeping of uncertainty as inputs to responses. Important practical implications arise if organisms can indeed be defined by an association with specific classes of inherent uncertainty: not least that isolating those signatures then provides a potential means for detecting life, for considering the forms that life could theoretically take, and for exploring the wider limits to how life might become distributed. These are all fundamental goals in astrobiology.

生物的行为是随机的。生态学文献中一种并不罕见的观点认为,这主要是由于观察者掌握的信息不足或环境随机所致,而不是部分由于生物本身的反应具有固有的不可预测性。在本研究中,我整理了与这一观点相悖的证据。生物体内部会产生不确定性,从而产生不可还原的随机反应。我考虑了其中的原因:例如,随机反应与对不断变化的环境和资源可用性的更强适应性有关。在更长的时间尺度上,生物产生的不确定性会影响行为、进化和宏观生态过程。事实上,可以说生物是由内部产生、放大和记录不确定性作为反应输入而定义的系统。如果生物体确实可以通过与特定类别的固有不确定性相关联来定义,那么就会产生重要的实际影响:尤其是,分离这些特征将为探测生命、考虑生命在理论上可能采取的形式以及探索生命如何分布的更广泛限制提供潜在的手段。这些都是天体生物学的基本目标。
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引用次数: 0
Considerations for Detecting Organic Indicators of Metabolism on Enceladus. 检测恩克拉多斯新陈代谢有机指标的考虑因素。
IF 4.2 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-03-01 DOI: 10.1089/ast.2023.0074
Laura M Barge, Gregory P Fournier

Enceladus is of interest to astrobiology and the search for life since it is thought to host active hydrothermal activity and habitable conditions. It is also possible that the organics detected on Enceladus may indicate an active prebiotic or biotic system; in particular, the conditions on Enceladus may favor mineral-driven protometabolic reactions. When including metabolism-related biosignatures in Enceladus mission concepts, it is necessary to base these in a clearer understanding of how these signatures could also be produced prebiotically. In addition, postulating which biological metabolisms to look for on Enceladus requires a non-Earth-centric approach since the details of biological metabolic pathways are heavily shaped by adaptation to geochemical conditions over the planet's history. Creating metabolism-related organic detection objectives for Enceladus missions, therefore, requires consideration of how metabolic systems may operate differently on another world, while basing these speculations on observed Earth-specific microbial processes. In addition, advances in origin-of-life research can play a critical role in distinguishing between interpretations of any future organic detections on Enceladus, and the discovery of an extant prebiotic system would be a transformative astrobiological event in its own right.

土卫二对天体生物学和生命探索具有重要意义,因为它被认为具有活跃的热液活动和适宜居住的条件。在恩克拉多斯上探测到的有机物也有可能预示着一个活跃的前生物或生物系统;特别是,恩克拉多斯上的条件可能有利于矿物驱动的原代谢反应。在将与新陈代谢有关的生物特征纳入恩克拉多斯飞行任务概念时,有必要在更清楚地了解这些特征如何也能通过前生物产生的基础上进行。此外,由于生物新陈代谢途径的细节在很大程度上取决于对地球历史上地球化学条件的适应情况,因此要在恩克拉多斯星球上寻找哪些生物新陈代谢需要一种非地球中心的方法。因此,要为土卫六飞行任务制定与新陈代谢有关的有机物探测目标,就需要考虑新陈代谢系统在另一个世界的运行方式可能会有所不同,同时将这些推测建立在观测到的地球特有微生物过程的基础上。此外,生命起源研究的进展可以在区分对今后在恩克拉多斯上探测到的任何有机物的解释方面发挥关键作用,发现一个现存的前生物系统本身就是一个变革性的天体生物学事件。
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引用次数: 0
Fluorescence Microscopy with Deep UV, Near UV, and Visible Excitation for In Situ Detection of Microorganisms. 利用深紫外、近紫外和可见光激发的荧光显微镜对微生物进行现场检测。
IF 4.2 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-03-01 DOI: 10.1089/ast.2023.0020
Noel Case, Nikki Johnston, Jay Nadeau

We report a simple, inexpensive design of a fluorescence microscope with light-emitting diode (LED) excitation for detection of labeled and unlabeled microorganisms in mineral substrates. The use of deep UV (DUV) excitation with visible emission requires no specialized optics or slides and can be implemented easily and inexpensively using an oblique illumination geometry. DUV excitation (<280 nm) is preferable to near UV (365 nm) for avoidance of mineral autofluorescence. When excited with DUV, unpigmented bacteria show two emission peaks: one in the near UV ∼320 nm, corresponding to proteins, and another peak in the blue to green range, corresponding to flavins and/or reduced nicotinamide adenine dinucleotide (NADH). Many commonly used dyes also show secondary excitation peaks in the DUV, with identical emission spectra and quantum yields as their primary peak. However, DUV fails to excite key biosignature molecules, especially chlorophyll in cyanobacteria. Visible excitation (violet to blue) also results in less mineral autofluorescence than near UV, and most autofluorescence in the minerals seen here is green, so that red dyes and red autofluorescence of chlorophyll and porphyrins are readily distinguished. The pairing of DUV and near UV or visible excitation, with emission across the visible, represents the most thorough approach to detection of labeled and unlabeled bacteria in soil and rock.

我们报告了一种设计简单、成本低廉的发光二极管(LED)激发荧光显微镜,用于检测矿物基质中已标记和未标记的微生物。使用深紫外(DUV)激发和可见光发射不需要专门的光学器件或载玻片,而且可以使用斜照明几何结构轻松实现,成本低廉。DUV 激发 (
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引用次数: 0
Chapter 1: The Astrobiology Primer 3.0. 第 1 章:天体生物学入门 3.0。
IF 4.2 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-03-01 DOI: 10.1089/ast.2021.0129
Micah J Schaible, Nadia Szeinbaum, G Ozan Bozdag, Luoth Chou, Natalie Grefenstette, Stephanie Colón-Santos, Laura E Rodriguez, M J Styczinski, Jennifer L Thweatt, Zoe R Todd, Alberto Vázquez-Salazar, Alyssa Adams, M N Araújo, Thiago Altair, Schuyler Borges, Dana Burton, José Alberto Campillo-Balderas, Eryn M Cangi, Tristan Caro, Enrico Catalano, Kimberly Chen, Peter L Conlin, Z S Cooper, Theresa M Fisher, Santiago Mestre Fos, Amanda Garcia, D M Glaser, Chester E Harman, Ninos Y Hermis, M Hooks, K Johnson-Finn, Owen Lehmer, Ricardo Hernández-Morales, Kynan H G Hughson, Rodrigo Jácome, Tony Z Jia, Jeffrey J Marlow, Jordan McKaig, Veronica Mierzejewski, Israel Muñoz-Velasco, Ceren Nural, Gina C Oliver, Petar I Penev, Chinmayee Govinda Raj, Tyler P Roche, Mary C Sabuda, George A Schaible, Serhat Sevgen, Pritvik Sinhadc, Luke H Steller, Kamil Stelmach, J Tarnas, Frank Tavares, Gareth Trubl, Monica Vidaurri, Lena Vincent, Jessica M Weber, Maggie Meiqi Weng, Regina L Wilpiszeki, Amber Young

The Astrobiology Primer 3.0 (ABP3.0) is a concise introduction to the field of astrobiology for students and others who are new to the field of astrobiology. It provides an entry into the broader materials in this supplementary issue of Astrobiology and an overview of the investigations and driving hypotheses that make up this interdisciplinary field. The content of this chapter was adapted from the other 10 articles in this supplementary issue and thus represents the contribution of all the authors who worked on these introductory articles. The content of this chapter is not exhaustive and represents the topics that the authors found to be the most important and compelling in a dynamic and changing field.

天体生物学入门 3.0》(ABP3.0)是对天体生物学领域的简明介绍,适用于初涉天体生物学领域的学生和其他人。它提供了一个进入本期《天体生物学》增刊中更广泛材料的入口,并概述了构成这一跨学科领域的研究和驱动性假设。本章内容改编自本增刊的其他 10 篇文章,因此代表了所有参与这些介绍性文章的作者的贡献。本章内容并非详尽无遗,而是作者们认为在这个充满活力、不断变化的领域中最重要、最引人注目的主题。
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引用次数: 0
Chapter 11: Astrobiology Education, Engagement, and Resources. 第 11 章:天体生物学教育、参与和资源。
IF 4.2 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-03-01 DOI: 10.1089/ast.2021.0098
M J Styczinski, D M Glaser, M Hooks, T Z Jia, K Johnson-Finn, G A Schaible, M J Schaible

Although astrobiology is a relatively new field of science, the questions it seeks to answer (e.g., "What is life?" "What does life require?") have been investigated for millennia. In recent decades, formal programs dedicated specifically to the science of astrobiology have been organized at academic, governmental, and institutional scales. Constructing educational programs around this emerging science relies on input from broad expertise and backgrounds. Because of the interdisciplinary nature of this field, career pathways in astrobiology often begin in more specific fields such as astronomy, geology, or biology, and unlike many other sciences, typically involve substantial training outside one's primary discipline. The recent origin of astrobiology as a field of science has led to strong collaborations with education research in the development of astrobiology courses and offers a unique instructional laboratory for further pedagogical studies. This chapter is intended to support students, educators, and early career scientists by connecting them to materials and opportunities that the authors and colleagues have found advantageous. Annotated lists of relevant programs and resources are included as a series of appendices in the supplementary material.

虽然天体生物学是一个相对较新的科学领域,但它所要回答的问题(如 "什么是生命?""生命需要什么?")已经研究了几千年。近几十年来,学术界、政府和机构组织了专门针对天体生物学科学的正式项目。围绕这门新兴科学构建教育计划,有赖于广泛的专业知识和背景的投入。由于这一领域的跨学科性质,天体生物学的职业道路通常从天文学、地质学或生物学等更具体的领域开始,而且与许多其他科学不同,通常需要在个人的主要学科之外接受大量培训。最近,天体生物学作为一个科学领域的起源,导致了在开发天体生物学课程方面与教育研究的紧密合作,并为进一步的教学研究提供了一个独特的教学实验室。本章旨在为学生、教育工作者和早期职业科学家提供支持,将他们与作者及其同事认为有利的材料和机会联系起来。相关项目和资源的注释列表作为一系列附录载于补充材料中。
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引用次数: 0
Chapter 2: What Is Life? 第 2 章:生命是什么?
IF 4.2 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-03-01 DOI: 10.1089/ast.2021.0116
Stephanie Colón-Santos, Alberto Vázquez-Salazar, Alyssa Adams, José Alberto Campillo-Balderas, Ricardo Hernández-Morales, Rodrigo Jácome, Israel Muñoz-Velasco, Laura E Rodriguez, Micah J Schaible, George A Schaible, Nadia Szeinbaum, Jennifer L Thweatt, Gareth Trubl

The question "What is life?" has existed since the beginning of recorded history. However, the scientific and philosophical contexts of this question have changed and been refined as advancements in technology have revealed both fine details and broad connections in the network of life on Earth. Understanding the framework of the question "What is life?" is central to formulating other questions such as "Where else could life be?" and "How do we search for life elsewhere?" While many of these questions are addressed throughout the Astrobiology Primer 3.0, this chapter gives historical context for defining life, highlights conceptual characteristics shared by all life on Earth as well as key features used to describe it, discusses why it matters for astrobiology, and explores both challenges and opportunities for finding an informative operational definition.

"生命是什么?"这个问题自有史以来就一直存在。然而,随着技术的进步,这个问题的科学和哲学背景也在不断变化和完善,揭示了地球上生命网络的细枝末节和广泛联系。理解 "生命是什么?"这一问题的框架对于提出其他问题,如 "生命还可能存在于哪里?"和 "我们如何在其他地方寻找生命?"至关重要。虽然《天体生物学入门 3.0》通篇讨论了其中的许多问题,但本章介绍了生命定义的历史背景,强调了地球上所有生命共有的概念特征以及用于描述生命的关键特征,讨论了生命定义为何对天体生物学至关重要,并探讨了找到一个翔实的可操作定义所面临的挑战和机遇。
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引用次数: 0
Planetary Protection Knowledge Gap Closure Enabling Crewed Missions to Mars. 缩小行星保护知识差距,实现火星载人飞行任务。
IF 4.2 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-03-01 DOI: 10.1089/ast.2023.0092
James A Spry, Bette Siegel, Corien Bakermans, David W Beaty, Mary-Sue Bell, James N Benardini, Rosalba Bonaccorsi, Sarah L Castro-Wallace, David A Coil, Athena Coustenis, Peter T Doran, Lori Fenton, David P Fidler, Brian Glass, Stephen J Hoffman, Fathi Karouia, Joel S Levine, Mark L Lupisella, Javier Martin-Torres, Rakesh Mogul, Karen Olsson-Francis, Sandra Ortega-Ugalde, Manish R Patel, David A Pearce, Margaret S Race, Aaron B Regberg, Petra Rettberg, John D Rummel, Kevin Y Sato, Andrew C Schuerger, Elliot Sefton-Nash, Matthew Sharkey, Nitin K Singh, Silvio Sinibaldi, Perry Stabekis, Carol R Stoker, Kasthuri J Venkateswaran, Robert R Zimmerman, Maria-Paz Zorzano-Mier

As focus for exploration of Mars transitions from current robotic explorers to development of crewed missions, it remains important to protect the integrity of scientific investigations at Mars, as well as protect the Earth's biosphere from any potential harmful effects from returned martian material. This is the discipline of planetary protection, and the Committee on Space Research (COSPAR) maintains the consensus international policy and guidelines on how this is implemented. Based on National Aeronautics and Space Administration (NASA) and European Space Agency (ESA) studies that began in 2001, COSPAR adopted principles and guidelines for human missions to Mars in 2008. At that point, it was clear that to move from those qualitative provisions, a great deal of work and interaction with spacecraft designers would be necessary to generate meaningful quantitative recommendations that could embody the intent of the Outer Space Treaty (Article IX) in the design of such missions. Beginning in 2016, COSPAR then sponsored a multiyear interdisciplinary meeting series to address planetary protection "knowledge gaps" (KGs) with the intent of adapting and extending the current robotic mission-focused Planetary Protection Policy to support the design and implementation of crewed and hybrid exploration missions. This article describes the outcome of the interdisciplinary COSPAR meeting series, to describe and address these KGs, as well as identify potential paths to gap closure. It includes the background scientific basis for each topic area and knowledge updates since the meeting series ended. In particular, credible solutions for KG closure are described for the three topic areas of (1) microbial monitoring of spacecraft and crew health; (2) natural transport (and survival) of terrestrial microbial contamination at Mars, and (3) the technology and operation of spacecraft systems for contamination control. The article includes a KG data table on these topic areas, which is intended to be a point of departure for making future progress in developing an end-to-end planetary protection requirements implementation solution for a crewed mission to Mars. Overall, the workshop series has provided evidence of the feasibility of planetary protection implementation for a crewed Mars mission, given (1) the establishment of needed zoning, emission, transport, and survival parameters for terrestrial biological contamination and (2) the creation of an accepted risk-based compliance approach for adoption by spacefaring actors including national space agencies and commercial/nongovernment organizations.

随着火星探索的重点从目前的机器人探测器过渡到载人飞行任务的开发,保护火星科学调查的完整性以及保护地球生物圈免受返回火星物质的任何潜在有害影响仍然十分重要。这就是行星保护学科,空间研究委员会(COSPAR)就如何实施这一学科制定了协商一致的国际政策和指导方针。根据美国国家航空航天局(NASA)和欧洲航天局(ESA)于 2001 年开始的研究,空间研究委员会于 2008 年通过了人类火星任务的原则和指导方针。当时,要从这些定性规定出发,显然需要与航天器设计者开展大量工作和互动,以提出有意义的量化建议,从而在此类任务的设计中体现《外层空间条约》(第九条)的意图。从 2016 年开始,COSPAR 发起了一个多年期跨学科系列会议,以解决行星保护 "知识差距"(KGs)问题,目的是调整和扩展当前以机器人任务为重点的行星保护政策,以支持载人和混合探索任务的设计和实施。本文介绍了跨学科 COSPAR 系列会议的成果,以描述和解决这些 KGs,并确定缩小差距的潜在途径。文章包括每个主题领域的背景科学基础以及系列会议结束后的知识更新。特别是针对以下三个主题领域描述了消除 KG 的可靠解决方案:(1) 航天器和乘员健康的微生物监测;(2) 火星上陆地微生物污染的自然迁移(和生存);(3) 航天器污染控制系统的技术和操作。文章包括一个关于这些主题领域的 KG 数据表,该表旨在作为一个出发点,以便今后在为载人火星飞行任务制定端到端行星保护要求实施方案方面取得进展。总之,系列讲习班为载人火星飞行任务实施行星保护的可行性提供了证据,因为(1)确定了地球生物污染所需的分区、排放、运输和生存参数,以及(2)创建了一种公认的基于风险的合规方法,供包括国家空间机构和商业/非政府组织在内的航天行为体采用。
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引用次数: 0
Hardware Development for Plant Cultivation Allowing In Situ Fluorescence Analysis of Calcium Fluxes in Plant Roots Under Microgravity and Ground-Control Conditions. 用于植物栽培的硬件开发,允许在微重力和地面控制条件下对植物根部的钙通量进行原位荧光分析。
IF 4.2 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-03-01 DOI: 10.1089/ast.2023.0038
Magnus Rath, Michaela Dümmer, Jens Hauslage, Christian Liemersdorf, Christoph Forreiter

Maintaining an optimal leaf and stem orientation to yield a maximum photosynthetic output is accomplished by terrestrial plants using sophisticated mechanisms to balance their orientation relative to the Earth's gravity vector and the direction of sunlight. Knowledge of the signal transduction chains of both gravity and light perception and how they influence each other is essential for understanding plant development on Earth and plant cultivation in space environments. However, in situ analyses of cellular signal transduction processes in weightlessness, such as live cell imaging of signaling molecules using confocal fluorescence microscopy, require an adapted experimental setup that meets the special requirements of a microgravity environment. In addition, investigations under prolonged microgravity conditions require extensive resources, are rarely accessible, and do not allow for immediate sample preparation for the actual microscopic analysis. Therefore, supply concepts are needed that ensure both the viability of the contained plants over a longer period of time and an unhindered microscopic analysis in microgravity. Here, we present a customized supply unit specifically designed to study gravity-induced Ca2+ mobilization in roots of Arabidopsis thaliana. The unit can be employed for ground-based experiments, in parabolic flights, on sounding rockets, and probably also aboard the International Space Station.

陆生植物利用复杂的机制来平衡其相对于地球重力矢量和阳光方向的方向,从而保持最佳的叶片和茎干方向,以获得最大的光合输出。了解重力和光感知的信号转导链以及它们如何相互影响,对于理解地球上的植物发育和太空环境中的植物栽培至关重要。然而,在失重状态下对细胞信号传导过程进行原位分析,如使用共焦荧光显微镜对信号分子进行活细胞成像,需要一个适应微重力环境特殊要求的实验装置。此外,在长期微重力条件下进行研究需要大量资源,很少有机会获得这些资源,也无法立即制备样品进行实际的显微分析。因此,需要既能确保所含植物在较长时间内存活,又能在微重力环境下顺利进行显微分析的供应概念。在此,我们介绍一种专门为研究拟南芥根中重力诱导的 Ca2+ 调动而设计的定制供应装置。该装置可用于地面实验、抛物线飞行、探空火箭,也可能用于国际空间站。
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引用次数: 0
In Memoriam: Wayne Lowell Nicholson, March 26, 1958-June 8, 2023. 悼念韦恩-洛厄尔-尼科尔森(Wayne Lowell Nicholson),1958 年 3 月 26 日至 2023 年 6 月 8 日。
IF 4.2 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-03-01 Epub Date: 2023-12-27 DOI: 10.1089/ast.2023.0100
Jamie S Foster, Tina M Henkin, Tony Romeo, Andrew C Schuerger, Peter Setlow, Robert J Ferl, Kelly C Rice, Eric W Triplett, Patricia Fajardo-Cavazos
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引用次数: 0
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