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Spatial attention-based CSR-Unet framework for subdural and epidural hemorrhage segmentation and classification using CT images. 基于空间注意力的 CSR-Unet 框架,用于利用 CT 图像对硬膜下和硬膜外出血进行分割和分类。
IF 2.9 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-10-22 DOI: 10.1186/s12880-024-01455-6
Nafees Ahmed S, Prakasam P

Background: Automatic diagnosis and brain hemorrhage segmentation in Computed Tomography (CT) may be helpful in assisting the neurosurgeon in developing treatment plans that improve the patient's chances of survival. Because medical segmentation of images is important and performing operations manually is challenging, many automated algorithms have been developed for this purpose, primarily focusing on certain image modalities. Whenever a blood vessel bursts, a dangerous medical condition known as intracranial hemorrhage (ICH) occurs. For best results, quick action is required. That being said, identifying subdural (SDH) and epidural haemorrhages (EDH) is a difficult task in this field and calls for a new, more precise detection method.

Methods: This work uses a head CT scan to detect cerebral bleeding and distinguish between two types of dural hemorrhages using deep learning techniques. This paper proposes a rich segmentation approach to segment both SDH and EDH by enhancing segmentation efficiency with a better feature extraction procedure. This method incorporates Spatial attention- based CSR (convolution-SE-residual) Unet, for rich segmentation and precise feature extraction.

Results: According to the study's findings, the CSR based Spatial network performs better than the other models, exhibiting impressive metrics for all assessed parameters with a mean dice coefficient of 0.970 and mean IoU of 0.718, while EDH and SDH dice scores are 0.983 and 0.969 respectively.

Conclusions: The CSR Spatial network experiment results show that it can perform well regarding dice coefficient. Furthermore, Spatial Unet based on CSR may effectively model the complicated in segmentations and rich feature extraction and improve the representation learning compared to alternative deep learning techniques, of illness and medical treatment, to enhance the meticulousness in predicting the fatality.

背景:计算机断层扫描(CT)中的自动诊断和脑出血分割可能有助于协助神经外科医生制定治疗方案,从而提高患者的生存机会。由于图像的医学分割非常重要,而人工操作又具有挑战性,因此许多自动算法已为此目的开发出来,主要集中在某些图像模式上。每当血管破裂时,就会出现一种危险的医疗状况,即颅内出血(ICH)。为了达到最佳效果,必须迅速采取行动。尽管如此,识别硬膜下出血(SDH)和硬膜外出血(EDH)是这一领域的一项艰巨任务,需要一种新的、更精确的检测方法:这项工作使用头部 CT 扫描检测脑出血,并利用深度学习技术区分两种类型的硬脑膜出血。本文提出了一种丰富的分割方法,通过更好的特征提取程序提高分割效率,从而分割出 SDH 和 EDH。该方法结合了基于空间注意力的 CSR(卷积-SE-残留)Unet,以实现丰富的分割和精确的特征提取:根据研究结果,基于 CSR 的空间网络比其他模型表现更好,在所有评估参数方面都表现出令人印象深刻的指标,平均骰子系数为 0.970,平均 IoU 为 0.718,而 EDH 和 SDH 骰子分数分别为 0.983 和 0.969:CSR 空间网络实验结果表明,它在骰子系数方面表现良好。此外,与其他深度学习技术相比,基于 CSR 的 Spatial Unet 可以有效地对复杂的分割和丰富的特征提取进行建模,并改进疾病和医疗的表征学习,从而提高预测死亡的精细度。
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引用次数: 0
Nomogram based on multimodal ultrasound features for evaluating breast nonmass lesions: a single center study. 基于多模态超声特征的乳腺非肿块病变评估提名图:一项单中心研究。
IF 2.9 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-10-21 DOI: 10.1186/s12880-024-01462-7
Li-Fang Yu, Luo-Xi Zhu, Chao-Chao Dai, Xiao-Jing Xu, Yan-Juan Tan, Hong-Ju Yan, Ling-Yun Bao

Background: It is challenging to correctly identify and diagnose breast nonmass lesions. This study aimed to explore the multimodal ultrasound features associated with malignant breast nonmass lesions (NMLs), and evaluate their combined diagnostic performance.

Methods: This retrospective analysis was conducted on 573 breast NMLs, including 309 were benign and 264 were malignant, their multimodal ultrasound features (B-mode, color Doppler and strain elastography) were assessed by two experienced radiologists. Univariate and multivariate logistic regression analysises were used to explore multimodal ultrasound features associated with malignancy, and a nomogram was developed. Diagnostic performance and clinical utility were evaluated and validated by the receiver operating characteristic (ROC) curve, calibration curve and decision curve in the training and validation cohorts.

Results: Multimodal ultrasound features including linear (odds ratio [OR] = 4.69) or segmental distribution (OR = 7.67), posterior shadowing (OR = 3.14), calcification (OR = 7.40), hypovascularity (OR = 0.38), elasticity scored 4 (OR = 7.00) and 5 (OR = 15.77) were independent factors associated with malignant breast NMLs. The nomogram based on these features exhibited diagnostic performance in the training and validation cohorts were comparable to that of experienced radiologists, with superior specificity (89.4%, 89.5% vs. 81.2%) and positive predictive value (PPV) (89.2%, 90.4% vs. 82.4%). The nomogram also demonstrated good calibration in both training and validation cohorts (all P > 0.05). Decision curve analysis indicated that interventions guided by the nomogram would be beneficial across a wide range of threshold probabilities (0.05-1 in the training cohort and 0.05-0.93 in the validation cohort).

Conclusions: The combined use of linear or segmental distribution, posterior shadowing, calcification, hypervascularity and high elasticity score, displayed as a nomogram, demonstrated satisfied diagnostic performance for malignant breast NMLs, which may contribute to the imaging interpretation and clinical management of tumors.

背景:正确识别和诊断乳腺非肿块病变具有挑战性。本研究旨在探索与恶性乳腺非肿块病变(NMLs)相关的多模态超声特征,并评估其综合诊断性能:这项回顾性分析针对573例乳腺非肿块病变进行,其中309例为良性,264例为恶性,由两名经验丰富的放射科医生对其多模态超声特征(B型、彩色多普勒和应变弹性成像)进行评估。采用单变量和多变量逻辑回归分析探讨与恶性肿瘤相关的多模态超声特征,并绘制了提名图。在训练组和验证组中,通过接收器操作特征曲线(ROC)、校准曲线和决策曲线对诊断性能和临床实用性进行了评估和验证:结果:多模态超声特征包括线性(几率比 [OR] = 4.69)或节段性分布(OR = 7.67)、后部阴影(OR = 3.14)、钙化(OR = 7.40)、血管过少(OR = 0.38)、弹性评分 4(OR = 7.00)和 5(OR = 15.77),这些都是与恶性乳腺 NML 相关的独立因素。基于这些特征的提名图在训练组和验证组中的诊断性能与经验丰富的放射科医生相当,特异性(89.4%、89.5% vs. 81.2%)和阳性预测值(PPV)(89.2%、90.4% vs. 82.4%)均优于放射科医生。提名图在训练组和验证组中也显示出良好的校准性(所有 P > 0.05)。决策曲线分析表明,在广泛的阈值概率范围内(训练队列为 0.05-1,验证队列为 0.05-0.93),以提名图为指导的干预措施都是有益的:综合利用线性或节段性分布、后方阴影、钙化、高血管性和高弹性评分,以提名图的形式显示,对恶性乳腺 NML 的诊断效果令人满意,这可能有助于肿瘤的成像解释和临床管理。
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引用次数: 0
Comprehensive assessment of imaging quality of artificial intelligence-assisted compressed sensing-based MR images in routine clinical settings. 全面评估常规临床环境中基于人工智能辅助压缩传感的磁共振图像的成像质量。
IF 2.9 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-10-21 DOI: 10.1186/s12880-024-01463-6
Adiraju Karthik, Kamal Aggarwal, Aakaar Kapoor, Dharmesh Singh, Lingzhi Hu, Akash Gandhamal, Dileep Kumar

Background: Conventional MR acceleration techniques, such as compressed sensing, parallel imaging, and half Fourier often face limitations, including noise amplification, reduced signal-to-noise ratio (SNR) and increased susceptibility to artifacts, which can compromise image quality, especially in high-speed acquisitions. Artificial intelligence (AI)-assisted compressed sensing (ACS) has emerged as a novel approach that combines the conventional techniques with advanced AI algorithms. The objective of this study was to examine the imaging quality of the ACS approach by qualitative and quantitative analysis for brain, spine, kidney, liver, and knee MR imaging, as well as compare the performance of this method with conventional (non-ACS) MR imaging.

Methods: This study included 50 subjects. Three radiologists independently assessed the quality of MR images based on artefacts, image sharpness, overall image quality and diagnostic efficacy. SNR, contrast-to-noise ratio (CNR), edge content (EC), enhancement measure (EME), scanning time were used for quantitative evaluation. The Cohen's kappa correlation coefficient (k) was employed to measure radiologists' inter-observer agreement, and the Mann Whitney U-test used for comparison between non-ACS and ACS.

Results: The qualitative analysis of three radiologists demonstrated that ACS images showed superior clinical information than non-ACS images with a mean k of ~ 0.70. The images acquired with ACS approach showed statistically higher values (p < 0.05) for SNR, CNR, EC, and EME compared to the non-ACS images. Furthermore, the study's findings indicated that ACS-enabled images reduced scan time by more than 50% while maintaining high imaging quality.

Conclusion: Integrating ACS technology into routine clinical settings has the potential to speed up image acquisition, improve image quality, and enhance diagnostic procedures and patient throughput.

背景:传统的磁共振加速技术,如压缩传感、并行成像和半傅立叶,往往面临着各种限制,包括噪声放大、信噪比(SNR)降低和对伪影的敏感性增加,这些都会影响图像质量,尤其是在高速采集时。人工智能(AI)辅助压缩传感(ACS)是一种结合了传统技术和先进人工智能算法的新方法。本研究的目的是通过对脑、脊柱、肾脏、肝脏和膝关节磁共振成像的定性和定量分析,检验 ACS 方法的成像质量,并比较该方法与传统(非 ACS)磁共振成像的性能:本研究包括 50 名受试者。三名放射科医生根据伪影、图像清晰度、整体图像质量和诊断效果独立评估 MR 图像质量。信噪比(SNR)、对比-噪声比(CNR)、边缘内容(EC)、增强测量(EME)和扫描时间被用于定量评估。科恩卡帕相关系数(k)用于衡量放射科医生的观察者间一致性,曼-惠特尼U检验用于比较非ACS和ACS:结果:三位放射科医生的定性分析显示,ACS 图像比非 ACS 图像显示出更好的临床信息,平均 k 值约为 0.70。采用 ACS 方法获取的图像在统计学上显示出更高的值(p 结论:ACS 技术在临床常规检查中的应用将为临床医生提供更多的临床信息:将 ACS 技术整合到常规临床环境中,有可能加快图像采集速度、提高图像质量、改进诊断程序和病人吞吐量。
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引用次数: 0
Trends in CT examination utilization in the emergency department during and after the COVID-19 pandemic. COVID-19 大流行期间和之后急诊科使用 CT 检查的趋势。
IF 2.9 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-10-21 DOI: 10.1186/s12880-024-01457-4
Felix Kempter, Tobias Heye, Jan Vosshenrich, Benjamin Ceresa, Dominik Jäschke

Background: The increasing use of CT imaging in emergency departments, despite efforts of reducing low-value imaging, is not fully understood, especially during and after the COVID-19 pandemic. The aim of this study was to investigate the impact of COVID-19 pandemic related measures on trends and volume in CT examinations requested in the emergency department.

Methods: CT examinations of the head, chest, and/or abdomen-pelvis (n = 161,008), and chest radiographs (n = 113,240) performed at our tertiary care hospital between 01/2014 and 12/2023 were retrospectively analyzed. CT examinations (head, chest, abdomen, dual-region and polytrauma) and chest radiographs requested by the emergency department during (03/2020-03/2022) and after the COVID-19 pandemic (04/2022-12/2023) were compared to a pre-pandemic control period (02/2018-02/2020). Analyses included CT examinations per emergency department visit, and prediction models based on pre-pandemic trends and inpatient data. A regular expressions text search algorithm determined the most common clinical questions.

Results: The usage of dual-region and chest CT examinations were higher during (+ 116,4% and + 115.8%, respectively; p < .001) and after the COVID-19 pandemic (+ 88,4% and + 70.7%, respectively; p < .001), compared to the control period. Chest radiograph usage decreased (-54.1% and - 36.4%, respectively; p < .001). The post-pandemic overall CT examination rate per emergency department visit increased by 4.7%. The prediction model underestimated (p < .001) the growth (dual-region CT: 22.3%, chest CT: 26.7%, chest radiographs: -30.4%), and the rise (p < .001) was higher compared to inpatient data (dual-region CT: 54.8%, chest CT: 52.0%, CR: -32.3%). Post-pandemic, the number of clinical questions to rule out "pulmonary infiltrates", "abdominal pain" and "infection focus" increased up to 235.7% compared to the control period.

Conclusions: Following the COVID-19 pandemic, chest CT and dual-region CT usage in the emergency department experienced a disproportionate and sustained surge compared to pre-pandemic growth.

背景:尽管急诊科在努力减少低价值成像,但 CT 成像的使用仍在不断增加,尤其是在 COVID-19 大流行期间和之后。本研究旨在调查 COVID-19 大流行相关措施对急诊科要求进行 CT 检查的趋势和数量的影响:方法:回顾性分析了 2014 年 1 月 1 日至 2023 年 12 月 12 日期间在我院三级医院进行的头部、胸部和/或腹部骨盆 CT 检查(n = 161 008)和胸部 X 光片检查(n = 113 240)。将 COVID-19 大流行期间(2020 年 3 月至 2022 年 3 月)和之后(2022 年 4 月至 2023 年 12 月)急诊科申请的 CT 检查(头部、胸部、腹部、双区域和多创伤)和胸部 X 光片与大流行前对照期(2018 年 2 月至 2020 年 2 月)进行了比较。分析包括每次急诊就诊的 CT 检查,以及基于大流行前趋势和住院患者数据的预测模型。正则表达式文本搜索算法确定了最常见的临床问题:结果:在大流行期间,双区域 CT 和胸部 CT 检查的使用率较高(分别为 + 116.4% 和 + 115.8%;P 结论:在 COVID-19 大流行之后,CT 检查的使用率有所下降:COVID-19 大流行后,急诊科胸部 CT 和双区域 CT 的使用率与大流行前相比出现了不成比例的持续激增。
{"title":"Trends in CT examination utilization in the emergency department during and after the COVID-19 pandemic.","authors":"Felix Kempter, Tobias Heye, Jan Vosshenrich, Benjamin Ceresa, Dominik Jäschke","doi":"10.1186/s12880-024-01457-4","DOIUrl":"10.1186/s12880-024-01457-4","url":null,"abstract":"<p><strong>Background: </strong>The increasing use of CT imaging in emergency departments, despite efforts of reducing low-value imaging, is not fully understood, especially during and after the COVID-19 pandemic. The aim of this study was to investigate the impact of COVID-19 pandemic related measures on trends and volume in CT examinations requested in the emergency department.</p><p><strong>Methods: </strong>CT examinations of the head, chest, and/or abdomen-pelvis (n = 161,008), and chest radiographs (n = 113,240) performed at our tertiary care hospital between 01/2014 and 12/2023 were retrospectively analyzed. CT examinations (head, chest, abdomen, dual-region and polytrauma) and chest radiographs requested by the emergency department during (03/2020-03/2022) and after the COVID-19 pandemic (04/2022-12/2023) were compared to a pre-pandemic control period (02/2018-02/2020). Analyses included CT examinations per emergency department visit, and prediction models based on pre-pandemic trends and inpatient data. A regular expressions text search algorithm determined the most common clinical questions.</p><p><strong>Results: </strong>The usage of dual-region and chest CT examinations were higher during (+ 116,4% and + 115.8%, respectively; p < .001) and after the COVID-19 pandemic (+ 88,4% and + 70.7%, respectively; p < .001), compared to the control period. Chest radiograph usage decreased (-54.1% and - 36.4%, respectively; p < .001). The post-pandemic overall CT examination rate per emergency department visit increased by 4.7%. The prediction model underestimated (p < .001) the growth (dual-region CT: 22.3%, chest CT: 26.7%, chest radiographs: -30.4%), and the rise (p < .001) was higher compared to inpatient data (dual-region CT: 54.8%, chest CT: 52.0%, CR: -32.3%). Post-pandemic, the number of clinical questions to rule out \"pulmonary infiltrates\", \"abdominal pain\" and \"infection focus\" increased up to 235.7% compared to the control period.</p><p><strong>Conclusions: </strong>Following the COVID-19 pandemic, chest CT and dual-region CT usage in the emergency department experienced a disproportionate and sustained surge compared to pre-pandemic growth.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"24 1","pages":"283"},"PeriodicalIF":2.9,"publicationDate":"2024-10-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11492618/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142457389","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Feasibility of an artificial intelligence system for tumor response evaluation. 肿瘤反应评估人工智能系统的可行性。
IF 2.9 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-10-18 DOI: 10.1186/s12880-024-01460-9
Nie Xiuli, Chen Hua, Gao Peng, Yu Hairong, Sun Meili, Yan Peng

Purpose: The objective of this study was to evaluate the feasibility of using Artificial Intelligence (AI) to measure the long-diameter of tumors for evaluating treatment response.

Methods: Our study included 48 patients with lung-specific target lesions and conducted 277 measurements. The radiologists recorded the long-diameter in axial imaging plane of the target lesions for each measurement. Meanwhile, AI software was utilized to measure the long-diameter in both the axial imaging plane and in three dimensions (3D). Statistical analyses including the Bland-Altman plot, Spearman correlation analysis, and paired t-test to ascertain the accuracy and reliability of our findings.

Results: The Bland-Altman plot showed that the AI measurements had a bias of -0.28 mm and had limits of agreement ranging from - 13.78 to 13.22 mm (P = 0.497), indicating agreement with the manual measurements. However, there was no agreement between the 3D measurements and the manual measurements, with P < 0.001. The paired t-test revealed no statistically significant difference between the manual measurements and AI measurements (P = 0.497), whereas a statistically significant difference was observed between the manual measurements and 3D measurements (P < 0.001).

Conclusions: The application of AI in measuring the long-diameter of tumors had significantly improved efficiency and reduced the incidence of subjective measurement errors. This advancement facilitated more convenient and accurate tumor response evaluation.

目的:本研究旨在评估使用人工智能(AI)测量肿瘤长径以评估治疗反应的可行性:我们的研究纳入了48例肺特异性靶病变患者,进行了277次测量。放射科医生记录了每次测量的靶病灶轴向成像平面长径。同时,利用人工智能软件测量轴向成像平面和三维(3D)的长径。统计分析包括 Bland-Altman 图、Spearman 相关性分析和配对 t 检验,以确定研究结果的准确性和可靠性:布兰德-阿尔特曼图显示,人工智能测量结果的偏差为-0.28毫米,一致性范围为-13.78至13.22毫米(P=0.497),表明与人工测量结果一致。然而,三维测量结果与人工测量结果不一致,P 结论:人工智能在肿瘤长径测量中的应用大大提高了效率,减少了主观测量误差的发生。这一进步有助于更方便、更准确地评估肿瘤反应。
{"title":"Feasibility of an artificial intelligence system for tumor response evaluation.","authors":"Nie Xiuli, Chen Hua, Gao Peng, Yu Hairong, Sun Meili, Yan Peng","doi":"10.1186/s12880-024-01460-9","DOIUrl":"https://doi.org/10.1186/s12880-024-01460-9","url":null,"abstract":"<p><strong>Purpose: </strong>The objective of this study was to evaluate the feasibility of using Artificial Intelligence (AI) to measure the long-diameter of tumors for evaluating treatment response.</p><p><strong>Methods: </strong>Our study included 48 patients with lung-specific target lesions and conducted 277 measurements. The radiologists recorded the long-diameter in axial imaging plane of the target lesions for each measurement. Meanwhile, AI software was utilized to measure the long-diameter in both the axial imaging plane and in three dimensions (3D). Statistical analyses including the Bland-Altman plot, Spearman correlation analysis, and paired t-test to ascertain the accuracy and reliability of our findings.</p><p><strong>Results: </strong>The Bland-Altman plot showed that the AI measurements had a bias of -0.28 mm and had limits of agreement ranging from - 13.78 to 13.22 mm (P = 0.497), indicating agreement with the manual measurements. However, there was no agreement between the 3D measurements and the manual measurements, with P < 0.001. The paired t-test revealed no statistically significant difference between the manual measurements and AI measurements (P = 0.497), whereas a statistically significant difference was observed between the manual measurements and 3D measurements (P < 0.001).</p><p><strong>Conclusions: </strong>The application of AI in measuring the long-diameter of tumors had significantly improved efficiency and reduced the incidence of subjective measurement errors. This advancement facilitated more convenient and accurate tumor response evaluation.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"24 1","pages":"280"},"PeriodicalIF":2.9,"publicationDate":"2024-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11488245/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142457375","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Segmentation of choroidal area in optical coherence tomography images using a transfer learning-based conventional neural network: a focus on diabetic retinopathy and a literature review. 使用基于迁移学习的传统神经网络分割光学相干断层扫描图像中的脉络膜区域:聚焦糖尿病视网膜病变及文献综述。
IF 2.9 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-10-18 DOI: 10.1186/s12880-024-01459-2
Jamshid Saeidian, Hossein Azimi, Zohre Azimi, Parnia Pouya, Hassan Asadigandomani, Hamid Riazi-Esfahani, Alireza Hayati, Kimia Daneshvar, Elias Khalili Pour

Background: This study aimed to evaluate the effectiveness of DeepLabv3+with Squeeze-and-Excitation (DeepLabv3+SE) architectures for segmenting the choroid in optical coherence tomography (OCT) images of patients with diabetic retinopathy.

Methods: A total of 300 B-scans were selected from 21 patients with mild to moderate diabetic retinopathy. Six DeepLabv3+SE variants, each utilizing a different pre-trained convolutional neural network (CNN) for feature extraction, were compared. Segmentation performance was assessed using the Jaccard index, Dice score (DSC), precision, recall, and F1-score. Binarization and Bland-Altman analysis were employed to evaluate the agreement between automated and manual measurements of choroidal area, luminal area (LA), and Choroidal Vascularity Index (CVI).

Results: DeepLabv3+SE with EfficientNetB0 achieved the highest segmentation performance, with a Jaccard index of 95.47, DSC of 98.29, precision of 98.80, recall of 97.41, and F1-score of 98.10 on the validation set. Bland-Altman analysis indicated good agreement between automated and manual measurements of LA and CVI.

Conclusions: DeepLabv3+SE with EfficientNetB0 demonstrates promise for accurate choroid segmentation in OCT images. This approach offers a potential solution for automated CVI calculation in diabetic retinopathy patients. Further evaluation of the proposed method on a larger and more diverse dataset can strengthen its generalizability and clinical applicability.

研究背景本研究旨在评估 DeepLabv3+ with Squeeze-and-Excitation (DeepLabv3+SE) 架构在糖尿病视网膜病变患者的光学相干断层扫描(OCT)图像中分割脉络膜的效果:从 21 名轻度至中度糖尿病视网膜病变患者中选取了共计 300 张 B 扫描图像。对六种 DeepLabv3+SE 变体进行了比较,每种变体都使用不同的预训练卷积神经网络(CNN)进行特征提取。分段性能使用 Jaccard 指数、Dice 分数 (DSC)、精确度、召回率和 F1 分数进行评估。采用二值化和Bland-Altman分析来评估脉络膜面积、管腔面积(LA)和脉络膜血管指数(CVI)的自动测量与人工测量之间的一致性:在验证集上,DeepLabv3+SE 与 EfficientNetB0 的分割性能最高,Jaccard 指数为 95.47,DSC 为 98.29,精确度为 98.80,召回率为 97.41,F1 分数为 98.10。Bland-Altman分析表明,LA和CVI的自动测量与手动测量之间具有良好的一致性:DeepLabv3+SE和EfficientNetB0有望在OCT图像中实现准确的脉络膜分割。这种方法为自动计算糖尿病视网膜病变患者的 CVI 提供了一种潜在的解决方案。在更大和更多样化的数据集上对所提出的方法进行进一步评估,可以增强其通用性和临床适用性。
{"title":"Segmentation of choroidal area in optical coherence tomography images using a transfer learning-based conventional neural network: a focus on diabetic retinopathy and a literature review.","authors":"Jamshid Saeidian, Hossein Azimi, Zohre Azimi, Parnia Pouya, Hassan Asadigandomani, Hamid Riazi-Esfahani, Alireza Hayati, Kimia Daneshvar, Elias Khalili Pour","doi":"10.1186/s12880-024-01459-2","DOIUrl":"10.1186/s12880-024-01459-2","url":null,"abstract":"<p><strong>Background: </strong>This study aimed to evaluate the effectiveness of DeepLabv3+with Squeeze-and-Excitation (DeepLabv3+SE) architectures for segmenting the choroid in optical coherence tomography (OCT) images of patients with diabetic retinopathy.</p><p><strong>Methods: </strong>A total of 300 B-scans were selected from 21 patients with mild to moderate diabetic retinopathy. Six DeepLabv3+SE variants, each utilizing a different pre-trained convolutional neural network (CNN) for feature extraction, were compared. Segmentation performance was assessed using the Jaccard index, Dice score (DSC), precision, recall, and F1-score. Binarization and Bland-Altman analysis were employed to evaluate the agreement between automated and manual measurements of choroidal area, luminal area (LA), and Choroidal Vascularity Index (CVI).</p><p><strong>Results: </strong>DeepLabv3+SE with EfficientNetB0 achieved the highest segmentation performance, with a Jaccard index of 95.47, DSC of 98.29, precision of 98.80, recall of 97.41, and F1-score of 98.10 on the validation set. Bland-Altman analysis indicated good agreement between automated and manual measurements of LA and CVI.</p><p><strong>Conclusions: </strong>DeepLabv3+SE with EfficientNetB0 demonstrates promise for accurate choroid segmentation in OCT images. This approach offers a potential solution for automated CVI calculation in diabetic retinopathy patients. Further evaluation of the proposed method on a larger and more diverse dataset can strengthen its generalizability and clinical applicability.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"24 1","pages":"281"},"PeriodicalIF":2.9,"publicationDate":"2024-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11488256/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142457388","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparison of different iterative reconstruction algorithms with contrast-enhancement boost technique on the image quality of CT pulmonary angiography for obese patients. 不同迭代重建算法与造影剂增强技术对肥胖患者 CT 肺血管造影图像质量的比较。
IF 2.9 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-10-18 DOI: 10.1186/s12880-024-01447-6
Mei Ye, Li Wang, Yan Xing, Yuxiang Li, Zicheng Zhao, Min Xu, Wenya Liu

Objective: To evaluate the effect of the contrast-enhancement-boost (CE-boost) postprocessing technique on improving the image quality of obese patients in computed tomography pulmonary angiography (CTPA) compared to hybrid iterative reconstruction (HIR) and model-based iterative reconstruction (MBIR) algorithms.

Methods: This prospective study was conducted on 100 patients who underwent CTPA for suspected pulmonary embolism. Non-obese patients with a body mass index (BMI) under 25 were designated as group 1, while obese patients (group 2) had a BMI exceeding 25. The CE-boost images were generated by subtracting non-contrast HIR images from contrast-enhanced HIR images to improve the visibility of pulmonary arteries further. The CT value, image noise, signal-to-noise ratio (SNR), and contrast-to-noise ratio (CNR) were quantitatively assessed. Two chest radiologists independently reviewed the CT images (5, best; 1, worst) across three subjective characteristics including diagnostic confidence, subjective image noise, and vascular contrast. The Friedman test and Dunn-Bonferroni correction were used for statistical analysis.

Results: The CE-boost had significantly higher CT values than HIR and MBIR in both groups (all p < 0.001). The MBIR yielded the lowest image noise compared with HIR and CE-boost (all p < 0.001). The SNR and CNR of main pulmonary artery (MPA) were significantly higher in CE-boost than in MBIR (all p < 0.05), with HIR showing the lowest values (all p < 0.001). Group 2 MBIR received significantly better subjective image noise scores, while the diagnostic confidence and vascular contrast scored highest with the group 2 CE-boost (all p < 0.05).

Conclusion: Compared to the HIR algorithm, both the CE-boost technique and the MBIR algorithm can improve the image quality of CTPA in obese patients. CE-boost had the greatest potential in increasing the visualization of pulmonary artery and its branches.

目的与混合迭代重建(HIR)和基于模型的迭代重建(MBIR)算法相比,评估对比度增强增强(CE-boost)后处理技术对改善肥胖患者计算机断层扫描肺动脉造影(CTPA)图像质量的影响:这项前瞻性研究的对象是 100 名因疑似肺栓塞而接受 CTPA 检查的患者。体重指数(BMI)低于 25 的非肥胖患者被指定为第 1 组,而体重指数超过 25 的肥胖患者(第 2 组)被指定为第 2 组。CE 增强图像是通过从对比增强 HIR 图像中减去非对比 HIR 图像生成的,以进一步提高肺动脉的可见度。对 CT 值、图像噪声、信噪比(SNR)和对比度-噪声比(CNR)进行了定量评估。两名胸部放射科医生对 CT 图像(5 分,最佳;1 分,最差)的诊断信心、主观图像噪声和血管对比度等三个主观特征进行了独立审查。统计分析采用 Friedman 检验和 Dunn-Bonferroni 校正:在两组中,CE-boost 的 CT 值均明显高于 HIR 和 MBIR(均为 p 结论:CE-boost 的 CT 值明显高于 HIR 和 MBIR:与 HIR 算法相比,CE-boost 技术和 MBIR 算法均可改善肥胖患者 CTPA 的图像质量。CE-boost 在提高肺动脉及其分支的可视化方面潜力最大。
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引用次数: 0
Primary spinal epidural abscess: magnetic resonance imaging characteristics and diagnosis. 原发性脊髓硬膜外脓肿:磁共振成像特征与诊断。
IF 2.9 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-10-17 DOI: 10.1186/s12880-024-01458-3
Gang Jiang, Ling-Ling Sun, Zhi-Tao Yang, Jiu-Fa Cui, Qing-Yuan Zhang, Chuan-Ping Gao

Rationale and objective: To investigate the MR characteristics of phlegmonous stage and abscess stage primary spinal epidural abscess.

Materials and methods: This study retrospectively analyzed the clinical and imaging characteristics of 27 cases of pathologically confirmed primary spinal epidural abscess. Predisposing conditions of all patients were collected. All patients underwent conventional magnetic resonance imaging, while fifteen patients also underwent post-contrast magnetic resonance imaging.

Results: The initial symptoms included back pain in 25 patients, fever in 18, motor deficit in five, and sensory changes in 13. Underlying diseases included distant site of infection in seven, injection therapy in five, neoplasm in five, chronic inflammatory disease in five, diabetes mellitus in four, alcoholism in three, metabolic disorder in three, hepatopathy in three, and obesity in two. Abscess location was ventral epidural space in 15 patients (55.6%) and dorsal epidural space in 12 (44.4%). On T1-weighted image, the abscess was hypointense to the spinal cord in 23 patients (85%) and isointense in four (15%). All abscesses were hyperintense to the spinal cord on T2-weighted image. Among the 15 patients who underwent contrast-enhanced imaging, ring enhancement was present in 13 and homogeneous enhancement in two. Adjacent vertebrae body edema was present in four patients. The abscess was purely intraspinal in 25 patients (92.6%). Paraspinal extension was present in two (7.4%).

Conclusion: Primary spinal epidural abscess patients have one or more predisposing conditions. Phlegmonous stage primary spinal epidural abscess appears isointense on T1WI and hyperintense on T2WI and enhancement is homogeneous. Abscess stage primary spinal epidural abscess hyperintense on T2WI and hypointense on T1WI and ring enhancement. Presence of vertebral body edema is an important sign to help diagnose primary spinal epidural abscess.

理由和目的:研究痰液期和脓肿期原发性脊髓硬膜外脓肿的磁共振特征:研究痰液期和脓肿期原发性脊髓硬膜外脓肿的磁共振特征:本研究回顾性分析了 27 例经病理证实的原发性脊髓硬膜外脓肿的临床和影像学特征。收集了所有患者的诱发因素。所有患者均接受了常规磁共振成像检查,15 例患者还接受了对比后磁共振成像检查:结果:25 名患者的最初症状包括背痛,18 名患者发热,5 名患者运动障碍,13 名患者感觉改变。基础疾病包括:7 例远处感染、5 例注射治疗、5 例肿瘤、5 例慢性炎症、4 例糖尿病、3 例酗酒、3 例代谢紊乱、3 例肝病和 2 例肥胖。15名患者(55.6%)的脓肿位于腹侧硬膜外腔,12名患者(44.4%)的脓肿位于背侧硬膜外腔。在T1加权图像上,23名患者(85%)的脓肿与脊髓呈低密度,4名患者(15%)的脓肿与脊髓呈等密度。在T2加权图像上,所有脓肿与脊髓呈高密度。在接受造影剂增强成像的15名患者中,13人出现环状增强,2人出现均质增强。四名患者出现邻近椎体水肿。25 名患者(92.6%)的脓肿完全位于椎管内。结论:结论:原发性脊柱硬膜外脓肿患者有一种或多种易患疾病。痰液期原发性脊髓硬膜外脓肿在 T1WI 上呈等密度,在 T2WI 上呈高密度,增强呈均匀性。脓肿期原发性脊髓硬膜外脓肿在 T2WI 上呈高密度,在 T1WI 上呈低密度,呈环状强化。椎体水肿是帮助诊断原发性脊髓硬膜外脓肿的重要标志。
{"title":"Primary spinal epidural abscess: magnetic resonance imaging characteristics and diagnosis.","authors":"Gang Jiang, Ling-Ling Sun, Zhi-Tao Yang, Jiu-Fa Cui, Qing-Yuan Zhang, Chuan-Ping Gao","doi":"10.1186/s12880-024-01458-3","DOIUrl":"https://doi.org/10.1186/s12880-024-01458-3","url":null,"abstract":"<p><strong>Rationale and objective: </strong>To investigate the MR characteristics of phlegmonous stage and abscess stage primary spinal epidural abscess.</p><p><strong>Materials and methods: </strong>This study retrospectively analyzed the clinical and imaging characteristics of 27 cases of pathologically confirmed primary spinal epidural abscess. Predisposing conditions of all patients were collected. All patients underwent conventional magnetic resonance imaging, while fifteen patients also underwent post-contrast magnetic resonance imaging.</p><p><strong>Results: </strong>The initial symptoms included back pain in 25 patients, fever in 18, motor deficit in five, and sensory changes in 13. Underlying diseases included distant site of infection in seven, injection therapy in five, neoplasm in five, chronic inflammatory disease in five, diabetes mellitus in four, alcoholism in three, metabolic disorder in three, hepatopathy in three, and obesity in two. Abscess location was ventral epidural space in 15 patients (55.6%) and dorsal epidural space in 12 (44.4%). On T1-weighted image, the abscess was hypointense to the spinal cord in 23 patients (85%) and isointense in four (15%). All abscesses were hyperintense to the spinal cord on T2-weighted image. Among the 15 patients who underwent contrast-enhanced imaging, ring enhancement was present in 13 and homogeneous enhancement in two. Adjacent vertebrae body edema was present in four patients. The abscess was purely intraspinal in 25 patients (92.6%). Paraspinal extension was present in two (7.4%).</p><p><strong>Conclusion: </strong>Primary spinal epidural abscess patients have one or more predisposing conditions. Phlegmonous stage primary spinal epidural abscess appears isointense on T1WI and hyperintense on T2WI and enhancement is homogeneous. Abscess stage primary spinal epidural abscess hyperintense on T2WI and hypointense on T1WI and ring enhancement. Presence of vertebral body edema is an important sign to help diagnose primary spinal epidural abscess.</p>","PeriodicalId":9020,"journal":{"name":"BMC Medical Imaging","volume":"24 1","pages":"278"},"PeriodicalIF":2.9,"publicationDate":"2024-10-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11487751/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142457387","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prediction of lymphovascular invasion in invasive breast cancer based on clinical-MRI radiomics features. 基于临床-磁共振成像放射组学特征预测浸润性乳腺癌的淋巴管侵犯
IF 2.9 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-10-16 DOI: 10.1186/s12880-024-01456-5
Chunling Zhang, Peng Zhou, Ruobing Li, Zhongyuan Li, Aimei Ouyang

Objective: We aim to develop a predictive model for lymphovascular invasion (LVI) in patients with invasive breast cancer (IBC), using magnetic resonance imaging (MRI)-based radiomics features.

Methods: A total of 204 patients with IBC admitted to our hospital were included in this retrospective study. The data was split into training and validation sets at a 7:3 ratio. Feature normalization was conducted, followed by feature selection using ANOVA, correlation analysis, and LASSO in the training set. The final step involved building a logistic regression model. The LVI prediction models were established by single sequence image and combined different sequence images as follows: A: prediction model based on the optimal sequence in the 7-phase enhanced MRI scans; B: prediction model based on the optimal sequences in the sequences T1WI, T2WI, and DWI; and C: the combined model based on the optimal sequences selected from A and B. Subjects' work characteristic curves (ROC) and decision curves (DCA) were plotted to determine the extent to which they predicted LVI performance in the training and validation sets. Simultaneously, nomogram models were constructed by integrating radiomics features and independent risk factors. In addition, an additional 16 patients from the center between January and August 2024 were collected as the Nomogram external validation set. The ROC and DCA were used to evaluate the performance of the model.

Results: In the enhanced images, Model A built based on the enhanced 2-phase achieved the best average AUC, with a validation set of 0.764. Model B built based on the T2WI had better results, with a validation set of 0.693. Model C built by combining enhanced 2-phase and T2WI sequences had a mean AUC of 0.705 in the validation set. In addition, the tumor size, whether the tumor boundary was clear or not, and whether there was a coelom in the tumor tissue had a statistically significant effect on the LVI of IBC, and a clinical-radiomics nomogram was established. DCAs as well as Nomogram also indicate that Model A has good clinical utility. The AUC of the nomogram in the training set, internal validation set, and external validation set were 0.703, 0.615, and 0.609, respectively. The DCA also showed that the radiomics nomogram combined with clinical factors had good predictive ability for LVI.

Conclusion: In IBC, MRI radiomics can serve as a noninvasive predictor of LVI. The clinical-MRI radiomics model, as an efficient visual prognostic tool, shows promise in forecasting LVI. This highlights the significant potential of pre-radiomics prediction in enhancing treatment strategies.

目的:我们旨在利用基于磁共振成像(MRI)的放射组学特征,建立浸润性乳腺癌(IBC)患者淋巴管侵犯(LVI)的预测模型:这项回顾性研究共纳入了 204 名在本院住院的 IBC 患者。数据按 7:3 的比例分成训练集和验证集。对特征进行归一化处理,然后在训练集中使用方差分析、相关分析和 LASSO 进行特征选择。最后一步是建立逻辑回归模型。LVI 预测模型通过单序列图像和组合不同序列图像建立,具体如下:A:基于 7 相增强 MRI 扫描中最佳序列的预测模型;B:基于 T1WI、T2WI 和 DWI 序列中最佳序列的预测模型;C:基于从 A 和 B 中选择的最佳序列的组合模型。绘制受试者工作特征曲线 (ROC) 和决策曲线 (DCA),以确定它们在训练集和验证集中预测 LVI 表现的程度。同时,通过整合放射组学特征和独立风险因素,构建了提名图模型。此外,还从该中心收集了 2024 年 1 月至 8 月期间的另外 16 名患者作为 Nomogram 外部验证集。采用ROC和DCA评估模型的性能:在增强图像中,基于增强 2 相建立的模型 A 获得了最佳平均 AUC,验证集为 0.764。基于 T2WI 建立的模型 B 效果更好,验证集为 0.693。结合增强型 2 相和 T2WI 序列建立的模型 C 在验证集中的平均 AUC 为 0.705。此外,肿瘤大小、肿瘤边界是否清晰以及肿瘤组织中是否有包膜对 IBC 的 LVI 有显著的统计学影响,并建立了临床放射组学提名图。DCA和提名图也表明模型A具有良好的临床实用性。在训练集、内部验证集和外部验证集中,提名图的AUC分别为0.703、0.615和0.609。DCA还显示,放射组学提名图与临床因素相结合对LVI具有良好的预测能力:结论:在 IBC 中,MRI 放射组学可作为 LVI 的无创预测指标。临床-MRI 放射组学模型作为一种高效的可视化预后工具,在预测 LVI 方面大有可为。这凸显了放射组学前期预测在加强治疗策略方面的巨大潜力。
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引用次数: 0
Calculation of virtual 3D subtraction angiographies using conditional generative adversarial networks (cGANs). 利用条件生成对抗网络(cGANs)计算虚拟三维减影血管造影。
IF 2.9 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-10-15 DOI: 10.1186/s12880-024-01454-7
Sebastian Johannes Müller, Eric Einspänner, Stefan Klebingat, Seraphine Zubel, Roland Schwab, Erelle Fuchs, Elie Diamandis, Eya Khadhraoui, Daniel Behme

Objective: Subtraction angiographies are calculated using a native and a contrast-enhanced 3D angiography images. This minimizes both bone and metal artifacts and results in a pure image of the vessels. However, carrying out the examination twice means double the radiation dose for the patient. With the help of generative AI, it could be possible to simulate subtraction angiographies from contrast-enhanced 3D angiographies and thus reduce the need for another dose of radiation without a cutback in quality. We implemented this concept by using conditional generative adversarial networks.

Methods: We selected all 3D subtraction angiographies from our PACS system, which had performed between 01/01/2018 and 12/31/2022 and randomly divided them into training, validation, and test sets (66%:17%:17%). We adapted the pix2pix framework to work on 3D data and trained a conditional generative adversarial network with 621 data sets. Additionally, we used 158 data sets for validation and 164 for testing. We evaluated two test sets with (n = 72) and without artifacts (n = 92). Five (blinded) neuroradiologists compared these datasets with the original subtraction dataset. They assessed similarity, subjective image quality, and severity of artifacts.

Results: Image quality and subjective diagnostic accuracy of the virtual subtraction angiographies revealed no significant differences compared to the original 3D angiographies. While bone and movement artifact level were reduced, artifact level caused by metal implants differed from case to case between both angiographies without one group being significant superior to the other.

Conclusion: Conditional generative adversarial networks can be used to simulate subtraction angiographies in clinical practice, however, new artifacts can also appear as a result of this technology.

目的:减影血管造影使用原始和对比增强三维血管造影图像进行计算。这样可以最大限度地减少骨和金属伪影,获得纯净的血管图像。然而,进行两次检查意味着患者要承受双倍的辐射剂量。在生成式人工智能的帮助下,可以模拟对比增强三维血管造影中的减影血管造影,从而在不降低质量的情况下减少对另一剂量辐射的需求。我们利用条件生成对抗网络实现了这一概念:我们从 PACS 系统中选取了 2018 年 1 月 1 日至 2022 年 12 月 31 日期间进行的所有三维减影血管造影,并将其随机分为训练集、验证集和测试集(66%:17%:17%)。我们调整了 pix2pix 框架,使其适用于三维数据,并使用 621 个数据集训练了条件生成对抗网络。此外,我们使用 158 个数据集进行验证,使用 164 个数据集进行测试。我们评估了有伪影(n = 72)和无伪影(n = 92)的两个测试集。五位(盲人)神经放射学专家将这些数据集与原始减影数据集进行了比较。他们评估了相似性、主观图像质量和伪影的严重程度:结果:虚拟减影血管造影的图像质量和主观诊断准确性与原始三维血管造影相比没有显著差异。虽然骨和运动伪影水平有所降低,但金属植入物造成的伪影水平在两种血管造影中因病例而异,没有一组明显优于另一组:结论:条件生成对抗网络可用于在临床实践中模拟减影血管造影,但这项技术也会产生新的伪影。
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