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Infectious diseases and millennium development goals (MDGs) 传染病与千年发展目标
Pub Date : 2018-11-13 DOI: 10.15406/BBIJ.2018.07.00252
S. Mishra
Efficient management of “infectious diseases” (Ids: caused by pathogenic microorganisms, such as bacteria, viruses, parasites or fungi; and spread, directly or indirectly, from one person to another) is an important aspects of achieving overall Millennium Development Goals (MDGs: eight goals with measurable targets and clear deadlines for improving the lives of the world’s poorest people).1 Emerging infectious diseases are “those infectious diseases whose incidence of occurrence in humans has increased within the recent past or threatens to increase in the near future”. Such diseases also include those infections that (a) “appear in new geographic areas”, and/or (b) “increase abruptly”. The new infectious diseases and those which are re-emerging after a period of quiescence are also grouped under emerging infectious diseases.
有效管理"传染病"(即:由细菌、病毒、寄生虫或真菌等病原微生物引起的传染病);并直接或间接地从一个人传播到另一个人)是实现总体千年发展目标的一个重要方面(千年发展目标:为改善世界上最贫困人口的生活而制定的八项目标,具有可衡量的具体目标和明确的最后期限)新发传染病是指"最近在人类中发病率增加或在不久的将来有增加危险的传染病"。这类疾病还包括:(a) "出现在新的地理区域"和/或(b) "突然增加"的感染。新发传染病和沉寂一段时间后重新出现的传染病也归为新发传染病。
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引用次数: 0
Construction and analysis of Sudoku square designs with rectangles 矩形数独方形设计的构造与分析
Pub Date : 2018-10-31 DOI: 10.15406/BBIJ.2018.07.00251
J. Subramani
The foremost and an important work to be completed immediately after the bed coffee in the morning by many is to solve a simple puzzle called Sudoku appeared in the newspapers and/or magazines. In fact millions of people from different parts of the world including from Japan, Great Britain, India and elsewhere become addict to tackle the latest edition of the Sudoku Puzzle. The puzzle typically consists of a nine–by–nine grid. Some of the grids contain numbers; most of the grids are blank. The goal is to fill in the blanks with digits from 1 to 9 so that each row, each column, and each of the nine three–by– three squares within the outer squares making up the grid contains just one of each of the nine digits. Here, the rules are very simple but the puzzles can be very challenging and highly addictive. It’s basically a logic puzzle; there’s no math involved in solving it. The digits could just as easily be nine different letters, shapes, or colors. There is mathematics and computer science, however, in analyzing the puzzles and creating efficient computer programs for generating and solving the Sudoku puzzles. A Sudoku grid is a special case of a mathematical object called a Latin square. A Latin square consists of n sets of numbers from 1 to n arranged in a square pattern so that no row or column contains the same number twice or more. The additional constraint is that a standard nine–by–nine sudoku puzzle has three– by–three squares within the Latin square that also contain each of the nine digits once and only once.
对许多人来说,早上喝完床上咖啡后马上要完成的最重要的工作是解决报纸和/或杂志上出现的一个简单的数独游戏。事实上,来自世界各地的数百万人,包括来自日本、英国、印度和其他地方的人,都沉迷于解决最新版本的数独难题。这个谜题通常由一个9乘9的格子组成。有些网格包含数字;大多数网格是空白的。目标是用从1到9的数字填充空格,这样每一行、每一列以及构成网格的外部正方形中的9个3乘3的正方形中的每一个都只包含9个数字中的一个。在这里,规则非常简单,但谜题可能非常具有挑战性,并且非常容易上瘾。这基本上是一个逻辑难题;解决这个问题不涉及数学。数字也可以是9个不同的字母、形状或颜色。然而,在分析谜题和创建有效的计算机程序来生成和解决数独谜题时,需要数学和计算机科学。数独网格是一种叫做拉丁方格的数学对象的特殊情况。拉丁方块由n组从1到n的数字组成,以正方形的方式排列,这样行或列就不会包含两次或两次以上相同的数字。额外的限制是,一个标准的9乘9数独谜题在拉丁方格中有3乘3的正方形,其中每个9位数字也只包含一次。
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引用次数: 2
Smoothing parameter estimation for first order discrete time infinite impulse response filters 一阶离散时间无限脉冲响应滤波器的平滑参数估计
Pub Date : 2018-10-22 DOI: 10.15406/BBIJ.2018.07.00250
L. Fenga
Among the many denoising methods and techniques successfully employed for univariate time series – e.g. based on regression,1 Kalman filter,2,3 decomposition,4 wavelet5,6 and non-linear method7– those based on algorithms of the type Infinite Impulse Response (IIR) exponential filters have been massively used, given their satisfactory performances (see, for example,8 and, more recently9). Such methods are useful for their ability to maximize the amount of relevant information that can be extracted from “real life” time series. In fact, regardless the scientific field time dependent data are collected for (e.g. engineering, economics, physics, environmental), they can never be error–free. In spite of all of the efforts and precautions one might take in order to provide clean data – e.g. robust data acquisition methods, reliable routine checks, sophisticated procedures for error correction, fail safe data storage and data communication lines – reality is way too complex for such procedures to be completely reliable.
在许多成功应用于单变量时间序列的去噪方法和技术中——例如基于回归、1卡尔曼滤波、2、3分解、4小波5、6和非线性方法7——那些基于无限脉冲响应(IIR)指数滤波器的算法已经被大量使用,因为它们具有令人满意的性能(例如,参见8和最近的9)。这样的方法是有用的,因为它们能够最大限度地从“现实生活”的时间序列中提取相关信息。事实上,无论科学领域的时间依赖数据被收集(例如工程、经济、物理、环境),它们都不可能是没有错误的。尽管为了提供干净的数据,人们可能采取了所有的努力和预防措施——例如,强大的数据采集方法、可靠的例行检查、复杂的纠错程序、故障安全的数据存储和数据通信线路——但现实情况太复杂,这些程序不可能完全可靠。
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引用次数: 0
Choosing statistical tests for survival analysis 为生存分析选择统计检验
Pub Date : 2018-10-17 DOI: 10.15406/BBIJ.2018.07.00249
I. Etikan, Kamila Bukirova, Meliz Yuvalı
Survival analysis is a very specific type of statistical analyses. Survival analysis is aimed to analyze not the event itself but the time lapsed to the event. This time of interest is also referred to as the failure time or survival time. The time used in survival analysis might be measured in different intervals: days, months, weeks, years, etc. The lengthy studies as a matter of course are preferred for being analyzed since they provide stronger evidence and more reliable results. However, it is practically unfeasible for some of the events to be observed over a long period of time. For example, in a study of the pancreatic cancer, one of the most lethal and rapidly growing type of cancer; researchers might get a very low median for survival time, which may indicate that half of the participants died within just a three month period. The studies, perhaps, would not be stopped at the moment of reaching three or six month period and may continue up until five years, but just on the miniscule, if any, number, of participants. The events in the survival analysis are usually deleterious in nature. The death is the prototypical event for the analysis, termed usually as a failure. Other events, such as an occurrence of a disease, relapse, smoking and drinking resumption, complication of the disease, might be of the research interest as well. The survival analysis methods can be used in other than medicine fields as well: in economics, political science, sociology, engineering.
生存分析是一种非常特殊的统计分析。生存分析的目的不是分析事件本身,而是分析到事件发生所经过的时间。这个相关时间也称为故障时间或生存时间。生存分析中使用的时间可能以不同的间隔测量:天、月、周、年等。冗长的研究当然更适合分析,因为它们提供了更有力的证据和更可靠的结果。然而,有些事件在很长一段时间内观察实际上是不可能的。例如,在一项关于胰腺癌的研究中,胰腺癌是最致命、增长最快的癌症之一;研究人员可能会得到一个非常低的生存时间中位数,这可能表明一半的参与者在三个月内死亡。这些研究也许不会在达到3个月或6个月的时候就停止,可能会持续到5年,但只是在极小的数量上,如果有的话,参与者。生存分析中的事件本质上通常是有害的。死亡是分析的典型事件,通常被称为失败。其他事件,如疾病的发生,复发,恢复吸烟和饮酒,疾病的并发症,也可能是研究的兴趣。生存分析方法不仅可以用于医学领域,还可以用于经济学、政治学、社会学、工程学等领域。
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引用次数: 10
Biometrical applications in biological sciences-A review on the agony for their practical efficiency-Problems and perspectives 生物识别技术在生物科学中的应用——对其实际应用效率问题的评述——问题与展望
Pub Date : 2018-10-05 DOI: 10.15406/BBIJ.2018.07.00248
S. Tzortzios
It is rather a very well known feeling in the teaching statistics rooms the common students’ anxiety for their inability to make clear the practical applications of the theoretical statistics on real biological research matters. Of course, it could be considered somehow reasonable some decades ago, as then there were not so many data available, neither computers in the lectures rooms and surely not any statistical software for the proper data organization, manipulation and analysis. Neither the students nor the researchers were of a diminished intelligence, but the lack of the proper tools available today was the reason of their inability to understand well the theory and make it applicable to practical matters. Frank Yates an enthusiastic user of computers writing used to say. to be a good theoretical statistician one must also compute, and must therefore have the best computing aids.
在统计教学教室中,学生们普遍感到焦虑,因为他们无法明确理论统计在实际生物研究问题上的实际应用。当然,这在几十年前可能被认为是合理的,因为当时没有那么多的数据,教室里没有电脑,当然也没有任何统计软件来进行适当的数据组织、操作和分析。这些学生和研究人员的智力都没有下降,但缺乏今天可用的适当工具是他们无法很好地理解理论并将其应用于实际问题的原因。弗兰克·耶茨是一位热衷电脑写作的用户。要成为一名优秀的理论统计学家,还必须进行计算,因此必须有最好的计算辅助工具。
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引用次数: 2
Seroprevalence of brucella infection among pregnant women in Sana’a city, Yemen 也门萨那市孕妇布氏菌感染的血清流行率
Pub Date : 2018-09-28 DOI: 10.15406/JEID.2017.1.00001
Q. Abdullah, Salwa H. Alkhyat, Anas A Almahbashi, Mofeed Al-Nowihi, Assem Al-Thobahni, Mohammed N Q Al-Bana, Saad Al-Arnoot
Brucellosis, commonly known as “undulant fever”, “Mediterranean fever” or “Malta fever” is a leading cause of zoonosis worldwide caused by the bacterial genus brucella.1 Brucella is an aerobic, gram-negative, non-fermenting, facultative intracellular, non-motile, non-spore-forming, cocci, cocobacilli or short rods based on DNA homology and represent a single species.2,3 It is transmitted to humans by direct or indirect contact with infected animals or their products.1–5 The entry of the organism is the conjunctiva, respiratory mucosa and damaged skin.6 Generally the transmission from person to person is uncommon, however the human sources of infection may occur in the following ways: vertical transmission with placental circulation, breast feeding, sexual contact, blood transfusion and bone marrow transplantation.7
布鲁氏菌病,俗称“波状热”、“地中海热”或“马耳他热”,是由布鲁氏菌属细菌引起的全球人畜共患病的主要原因布鲁氏菌是一种需氧、革兰氏阴性、非发酵、兼性细胞内、非运动、非孢子形成、基于DNA同源性的球菌、可可杆菌或短杆状菌,代表单一物种。2,3它通过直接或间接接触受感染的动物或其产品传播给人类。有机体的入口是结膜、呼吸粘膜和受损的皮肤一般来说,人与人之间的传播并不常见,但人类感染可能通过以下途径发生:胎盘循环垂直传播、母乳喂养、性接触、输血和骨髓移植
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引用次数: 4
Review on epidemiological features of Mycobaterium bovis at the human, cattle and wildlife interface in Ethiopia 埃塞俄比亚人、牛和野生动物交界面牛分枝杆菌流行病学特征综述
Pub Date : 2018-09-28 DOI: 10.15406/bbij.2018.07.00247
Gebawo Tibesso
Mycobaterium bovis is among a pathogenic species which belongs to the Mycobacterium tuberculosis complex (MTBC), a group of genetically closely related mycobacteria.1 Mycobaterium bovis (M. bovis) is an intracellular, non-motile, facultative, weakly Gram-positive acid-fast bacillus.2 The MTBC sub-group also comprises M. tuberculosis, M. africanum, M. canettii, M. pinnipedii, M. microti and M. caprae that are generally regarded as host adapted but with the ability to spill over into other species. Mycobaterium bovis is the primary cause of bovine tuberculosis (BTB). M. tuberculosis, M. africanum, M. caprae and M. canettii are human pathogens. M. caprae which causes infection in goats has been initially classified as subspecies of M. bovis but was recently recognized as a species on its own. M. microti affects rodents and M. pinnipedii have been isolated from seals.2 Mycobaterium bovis has an exceptionally wide range of mammalian hosts and affects all age groups of susceptible hosts of domestic, wild animals and human.2 Cattle are the most common maintenance host for M. bovis infection from which transmission can occur to wildlife, or people animals.3
牛分枝杆菌属于结核分枝杆菌复合体(MTBC),是一组遗传上密切相关的分枝杆菌牛分枝杆菌(M. bovis)是一种细胞内、不运动、兼性、弱革兰氏阳性抗酸杆菌MTBC亚群还包括结核分枝杆菌、非洲支原体、卡内蒂支原体、平尼蒂支原体、微支原体和caprae支原体,这些分枝原体通常被认为是适应宿主的,但具有向其他物种扩散的能力。牛分枝杆菌是牛结核(BTB)的主要病因。结核分枝杆菌、非洲分枝杆菌、卡普拉分枝杆菌和卡奈蒂分枝杆菌是人类病原体。引起山羊感染的山羊分枝杆菌最初被归类为牛分枝杆菌的亚种,但最近被认为是一个独立的物种。microti感染啮齿类动物,pinnipedii从海豹中分离出来牛分枝杆菌具有非常广泛的哺乳动物宿主,影响所有年龄段的家畜、野生动物和人类易感宿主牛是牛支原体感染最常见的维持宿主,这种感染可传播给野生动物或人类动物
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引用次数: 1
How influenza a causes ‘‘epidemics and pandemics’’ among the population: novel targets for anti-influenza molecules 甲型流感如何在人群中引起“流行病和大流行”:抗流感分子的新靶点
Pub Date : 2018-09-28 DOI: 10.15406/BBIJ.2018.07.00246
Sirwan Sleman
Influenza or flu is a contagious respiratory disease of birds, human& many other mammals and it is caused by influenza viruses. The flu viruses are of three types A, B and C but only type A is mainly found to cause severe epidemics and pandemics among human population. This is because the influenza A virus is serologically having several different subtypes based on combination between their surface antigens known as Hemagglutinin (HA) and Neuraminidase (NA), which are 18 and 11 in number respectively [1,2]. This serological variation is thought to enable the virus to undergo a constant antigenic variation to evade host immune system by using different mechanisms and as a result new strains with partially or completely changed surface antigens will develop which cannot be recognized by the pre-existing immunity against the older strains, either leading to a seasonal epidemic or spread more extensively causing a rare pandemic [1]. Different kind of drugs and compounds with antiviral activities have been described at different stages and targets of viral life cycle, especially at the attachment and entry targets (e.g. HA, NA, and M2 inhibitors). This is; however, the emergence of drug resistance has been reported due to continuous antigenic variations at those targets. Therefore, other alternative targets of viral cycle are thought to be essential to control the viral replication and pandemic infections, and more recently nuclear export of NP is found to be an effective and alternative target for development of anti-influenza a compounds. Several compounds are described to be effective against this target and most common examples are leptomycin B, Verdinixor, RK424, DP2392-E10...etc.
流感是一种由流感病毒引起的鸟类、人类和许多其他哺乳动物的传染性呼吸道疾病。流感病毒有A、B、C三种类型,但只有A型主要在人群中引起严重的流行病和大流行。这是因为甲型流感病毒根据其表面抗原血凝素(HA)和神经氨酸酶(NA)的组合,在血清学上有几种不同的亚型,分别有18种和11种[1,2]。这种血清学变异被认为使病毒经历持续的抗原变异,通过不同的机制逃避宿主免疫系统,从而产生部分或完全改变表面抗原的新毒株,这些毒株无法被先前存在的针对旧毒株的免疫识别,要么导致季节性流行,要么更广泛地传播,导致罕见的大流行[1]。在病毒生命周期的不同阶段和靶点,特别是在附着和进入靶点(如HA、NA和M2抑制剂),已经描述了不同种类的具有抗病毒活性的药物和化合物。这是;然而,由于这些靶点的持续抗原变异,已经报道了耐药性的出现。因此,病毒周期的其他替代靶点被认为对控制病毒复制和大流行感染至关重要,最近发现NP的核输出是开发抗甲型流感化合物的有效和替代靶点。几种化合物被描述为对该靶点有效,最常见的例子是leptomycin B、Verdinixor、RK424、DP2392-E10等。
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引用次数: 3
Predisposing risk factors for community-associated methicillin-resistant staphylococcus aureus infection: a study in a teaching hospital 某教学医院社区相关耐甲氧西林金黄色葡萄球菌感染的易感危险因素研究
Pub Date : 2018-09-27 DOI: 10.15406/bbij.2018.Issue.00244
C. Ambrosi
Community-acquired (CA) Methicillin-resistant Staphylococcus aureus (MRSA) infections occurs among healthy people or individuals with no identifiable healthcare-related predisposing risk factors. Communities all over the world with social and material deprivation have been significantly affected by the emergence of the condition since the end of the 20th century [1-7]. While the first documented cases of CA-MRSA infections occurred among Australian and Canadian aborigines in the early 1990s, infections that sharing the same genetical features than these first cases spread throughout the world. Particularly, in Brazil, the first report of CA-MRSA was similar to the Oceanian clones: two young individuals (23-year-old male and 34-yearold female who presented respectively skinand soft tissueassociated infections, and a male, 56 years old, presenting with septic arthritis were first documented who came from a city in the south of the country Porto Alegre) [8]. Currently, CA-MRSA infections are increasing within outcare departments in large metropolitan cities [1,7,9-11].
社区获得性(CA)耐甲氧西林金黄色葡萄球菌(MRSA)感染发生在健康人群或没有可识别的卫生保健相关易感危险因素的个体中。自20世纪末以来,世界各地的社会和物质剥夺社区都受到了这种状况的显著影响[1-7]。虽然最早记录的CA-MRSA感染病例发生在20世纪90年代初的澳大利亚和加拿大土著居民中,但与这些病例具有相同遗传特征的感染已蔓延到世界各地。特别是,在巴西,CA-MRSA的首次报告与大洋洲的克隆相似:两名年轻个体(23岁男性和34岁女性,分别表现为皮肤和软组织相关感染,一名56岁男性,表现为感染性关节炎,来自该国南部城市阿雷格里港)[8]。目前,CA-MRSA感染在大城市的门诊部门呈上升趋势[1,7,9-11]。
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引用次数: 0
Cross– resistance between antiseptic agents and antimicrobial agents 抗菌剂和抗菌剂之间的交叉耐药性
Pub Date : 2018-09-24 DOI: 10.15406/bbij.2018.07.00242
Lavanya Gudapuri
Commonly, antiseptic agents are used as preventive agents while antimicrobial agents are used for therapeutic purposes. Cross-resistance of antiseptic agents and antimicrobial agents is not thoroughly studied. Theoretically, it is possible since antiseptic agents sometimes act at the same receptors or pathways as the antimicrobial agents to curtail the infections. Due to this, exposure to antiseptic agents can trigger mutations in the receptors or the pathways which can result in the development of antimicrobial resistance. The term “cross-resistance” in the field of antimicrobial resistance is poorly defined. Many authors use the term “crossresistance” to indicate the development of resistance to different classes of antimicrobials such as β-lactams, aminoglycosides, polymyxins etc. [3-5]. It is often used in the same context as multidrug resistance. For this paper, cross-resistance specifically refers to the development of resistance to both antiseptic agents and antimicrobial agents. Very few studies are available on the crossresistance between antiseptic agents and antimicrobial agents. Wand et al found that invitro exposure of Klebsiella pneumoniae cultures to chlorhexidine resulted in the development of colistin resistance [6]. They detected specific mutations in the PhoP/Q following the exposure to chlorhexidine that resulted in the development of resistance to both chlorhexidine and colistin.
通常,杀菌剂用作预防剂,而抗菌剂用于治疗目的。抗菌剂与抗菌剂的交叉耐药研究尚不深入。从理论上讲,这是可能的,因为抗菌剂有时作用于与抗菌剂相同的受体或途径,以减少感染。因此,暴露于抗菌剂可以触发受体或途径的突变,从而导致抗菌素耐药性的发展。在抗菌素耐药性领域,术语“交叉耐药性”定义不清。许多作者使用“交叉耐药”一词来表示对不同类别的抗菌素如β-内酰胺类、氨基糖苷类、多粘菌素等的耐药发展[3-5]。它通常与多药耐药在同一背景下使用。在本文中,交叉耐药性特指对抗菌剂和抗菌剂同时产生耐药性。关于抗菌剂与抗菌剂交叉耐药的研究很少。Wand等人发现,肺炎克雷伯菌培养物体外暴露于氯己定会导致粘菌素耐药性的发展[10]。他们在暴露于氯己定后检测到PhoP/Q的特定突变,导致对氯己定和粘菌素的耐药性发展。
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引用次数: 8
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