Pub Date : 2024-09-30eCollection Date: 2024-01-01DOI: 10.5114/bta.2024.141804
Syeda Rubaiya Afrin, Mohammad Rashedul Islam, Md Ashraful Alam, Ummah Tasnim Nisat, Bakul Akter, Mohammed Kamrul Hossain
Background and objective: Since plant-based natural drugs are widely accepted in modern times and possess numerous pharmacological effects with an extensive therapeutic range, an ethnomedicinal plant native to Bangladesh was selected to investigate for investigation of its various pharmacological effects. Macropanax dispermus has been traditionally used and has demonstrated numerous pharmacological effects in preclinical investigations. Therefore, this research aimed to assess the central nervous system (CNS) depressant and antioxidant activities of the crude methanol extracts of the stem barks (MDMS), leaves (MDML), and their different fractions.
Methods: The CNS depressant activity was assessed using the hole cross, rota-rod, and elevated plus maze tests on Swiss Albino mice, while the antioxidant activity was evaluated using the 2,2-diphenyl-1-picrylhydrazyl free radical, hydrogen peroxide (H2O2) nonradical scavenging, and ferric reducing power assays.
Results: The conducted assays successfully demonstrated that the chloroform fraction of MDML is a significantly (P < 0.001) effective CNS depressant, muscle relaxant, and anxiolytic agent with excellent antioxidative effects compared to standard and control. The aqueous fraction of MDML also acted as a significantly (P < 0.001) active CNS depressant and muscle relaxant, and it was a highly active ferric-reducing agent. All effects were dose and concentration-dependent.
Conclusion: The presence of various phytochemicals might contribute to these activities. However, further research is suggested to isolate their active compounds and evaluate their mechanisms of action.
{"title":"Investigation of CNS depressant and muscle relaxant effects of the ethnomedicinal plant <i>Macropanax dispermus</i> on Swiss Albino mice and its effect against oxidative stress.","authors":"Syeda Rubaiya Afrin, Mohammad Rashedul Islam, Md Ashraful Alam, Ummah Tasnim Nisat, Bakul Akter, Mohammed Kamrul Hossain","doi":"10.5114/bta.2024.141804","DOIUrl":"https://doi.org/10.5114/bta.2024.141804","url":null,"abstract":"<p><strong>Background and objective: </strong>Since plant-based natural drugs are widely accepted in modern times and possess numerous pharmacological effects with an extensive therapeutic range, an ethnomedicinal plant native to Bangladesh was selected to investigate for investigation of its various pharmacological effects. <i>Macropanax dispermus</i> has been traditionally used and has demonstrated numerous pharmacological effects in preclinical investigations. Therefore, this research aimed to assess the central nervous system (CNS) depressant and antioxidant activities of the crude methanol extracts of the stem barks (MDMS), leaves (MDML), and their different fractions.</p><p><strong>Methods: </strong>The CNS depressant activity was assessed using the hole cross, rota-rod, and elevated plus maze tests on Swiss Albino mice, while the antioxidant activity was evaluated using the 2,2-diphenyl-1-picrylhydrazyl free radical, hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>) nonradical scavenging, and ferric reducing power assays.</p><p><strong>Results: </strong>The conducted assays successfully demonstrated that the chloroform fraction of MDML is a significantly (<i>P</i> < 0.001) effective CNS depressant, muscle relaxant, and anxiolytic agent with excellent antioxidative effects compared to standard and control. The aqueous fraction of MDML also acted as a significantly (<i>P</i> < 0.001) active CNS depressant and muscle relaxant, and it was a highly active ferric-reducing agent. All effects were dose and concentration-dependent.</p><p><strong>Conclusion: </strong>The presence of various phytochemicals might contribute to these activities. However, further research is suggested to isolate their active compounds and evaluate their mechanisms of action.</p>","PeriodicalId":94371,"journal":{"name":"Biotechnologia","volume":"105 3","pages":"249-261"},"PeriodicalIF":0.0,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11492893/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142515776","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Background: Recombinant plasminogen activator (r-PA) consists of the Kringle-2 and protease domains of human tissue-type plasminogen. It is used clinically to treat coronary artery thrombosis and acute myocardial infarction. However, the expression and production of reteplase (r-PA) are limited due to its susceptibility to proteolysis during manufacturing processes. Therefore, efforts have been made to address this limitation.
Materials and methods: To enhance the conformational stability of r-PA and increase its resistance to proteolysis, we used Gly 6 Ala substitutions in the Kringle-2 domain through in silico . We created an in silico mutant collection with eight structures, incorporating four designated mutations (R103S, G39A, G53A, and G55A). Using MODELLER software and homology modeling, we developed three-dimensional structures for two Kringle-2 and tissue plasminogen activator protease domains, including the wild noncleavable form (R103S) and mutants with all four designated mutations. We assessed protein stability using a dynamic cross-correlation matrix by extracting global properties such as Root Mean Square Deviation (RMSD) and Root Mean Square Fluctuation (RMSF) from trajectory files.
Results: The findings revealed that a single glycine-alanine substitution (G39A) enhanced the conformational stability of r-PA, as evidenced by improvements in RMSD, RMSF, radius of gyration, surface accessibility, hydrogen bond formation, eigenvector projection, and density analysis.
Conclusion: The conformational stability of r-PA conferred by glycine replacement with alanine may decrease the propensity for proteolysis in protease - rich environments across various recombinant systems and potentially enhance its production and expression levels.
{"title":"Investigation of the new substitution glycine to alanine within the Kringle-2 domain of reteplase: a molecular dynamics study.","authors":"Kaveh Haji-Allahverdipoor, Habib Eslami, Koosha Rokhzadi, Mokhtar Jalali Javaran, Sajad Rashidi Monfared, Mohamad Bagher Khademerfan","doi":"10.5114/bta.2024.141801","DOIUrl":"https://doi.org/10.5114/bta.2024.141801","url":null,"abstract":"<p><strong>Background: </strong>Recombinant plasminogen activator (r-PA) consists of the Kringle-2 and protease domains of human tissue-type plasminogen. It is used clinically to treat coronary artery thrombosis and acute myocardial infarction. However, the expression and production of reteplase (r-PA) are limited due to its susceptibility to proteolysis during manufacturing processes. Therefore, efforts have been made to address this limitation.</p><p><strong>Materials and methods: </strong>To enhance the conformational stability of r-PA and increase its resistance to proteolysis, we used Gly 6 Ala substitutions in the Kringle-2 domain through <i>in silico</i> . We created an <i>in silico</i> mutant collection with eight structures, incorporating four designated mutations (R103S, G39A, G53A, and G55A). Using MODELLER software and homology modeling, we developed three-dimensional structures for two Kringle-2 and tissue plasminogen activator protease domains, including the wild noncleavable form (R103S) and mutants with all four designated mutations. We assessed protein stability using a dynamic cross-correlation matrix by extracting global properties such as Root Mean Square Deviation (RMSD) and Root Mean Square Fluctuation (RMSF) from trajectory files.</p><p><strong>Results: </strong>The findings revealed that a single glycine-alanine substitution (G39A) enhanced the conformational stability of r-PA, as evidenced by improvements in RMSD, RMSF, radius of gyration, surface accessibility, hydrogen bond formation, eigenvector projection, and density analysis.</p><p><strong>Conclusion: </strong>The conformational stability of r-PA conferred by glycine replacement with alanine may decrease the propensity for proteolysis in protease - rich environments across various recombinant systems and potentially enhance its production and expression levels.</p>","PeriodicalId":94371,"journal":{"name":"Biotechnologia","volume":"105 3","pages":"201-213"},"PeriodicalIF":0.0,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11492890/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142515777","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Nanotechnology presents an exciting opportunity in cancer research by offering significant advancements in therapies, diagnosis, and management. It possesses unparalleled potential to enhance the accuracy and effectiveness of cancer therapy while simultaneously reducing adverse effects, owing to its distinctive capability to manipulate matter at a molecular level. Using nanoparticle carriers has facilitated the precise administration of therapeutic agents to afflicted areas within the human body through customized drug delivery systems, resulting in improved treatment accuracy and efficacy while reducing adverse effects. These techniques improve drug solubility and stability, leading to elevated levels of biochemical availability and improved efficacy outcomes for patients with minimal negative effects during treatment cycles. Another use case for nanoparticles includes tumor imaging; functionalized with targeting ligands containing diagnostic agents, they foster early detection, making quicker remedial action plans possible. Overall, the incorporation of nanotechnology ensures a promising future, although it stresses the need to address regulatory hurdles and safety concerns before widespread clinical implementation. Despite the complexity of cancer research and patient care, nanotechnology shows promise in transforming both fields.
{"title":"Nanotechnology in cancer therapeutics, diagnosis, and management.","authors":"Disha Hazarika, Sumit Sarma, Priyanka Shankarishan","doi":"10.5114/bta.2024.141807","DOIUrl":"https://doi.org/10.5114/bta.2024.141807","url":null,"abstract":"<p><p>Nanotechnology presents an exciting opportunity in cancer research by offering significant advancements in therapies, diagnosis, and management. It possesses unparalleled potential to enhance the accuracy and effectiveness of cancer therapy while simultaneously reducing adverse effects, owing to its distinctive capability to manipulate matter at a molecular level. Using nanoparticle carriers has facilitated the precise administration of therapeutic agents to afflicted areas within the human body through customized drug delivery systems, resulting in improved treatment accuracy and efficacy while reducing adverse effects. These techniques improve drug solubility and stability, leading to elevated levels of biochemical availability and improved efficacy outcomes for patients with minimal negative effects during treatment cycles. Another use case for nanoparticles includes tumor imaging; functionalized with targeting ligands containing diagnostic agents, they foster early detection, making quicker remedial action plans possible. Overall, the incorporation of nanotechnology ensures a promising future, although it stresses the need to address regulatory hurdles and safety concerns before widespread clinical implementation. Despite the complexity of cancer research and patient care, nanotechnology shows promise in transforming both fields.</p>","PeriodicalId":94371,"journal":{"name":"Biotechnologia","volume":"105 3","pages":"287-303"},"PeriodicalIF":0.0,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11492894/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142515778","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Screening for effective vaccines requires broad studies on their immunogenicity in vitro and ex vivo . We used a PBMC-based system to assess changes in CD4+ T cells, CD8+ T cells, and CD19+ B cells upon stimulation with different combinations of antigens and adjuvants. We studied the activation mechanism using flow cytometry and two different adenoviral adjuvants characterized by the presence or absence of costimulatory ligands for the ICOS and CD40 receptors. Our studies identified the cellular targets and molecular mechanisms driving ongoing switched-antibody diversification. Class-switched memory B cells were the main precursor cells (95.03% ± 0.38 vs. mock 82.33% ± 0.45, P < 0.05) after treatment with the immunogenic formula: adenovirus armed (MIX1) or not (MIX2) with the ICOS and CD40 ligand, the recombinant receptor binding domain (rRBD), and Lentifect™ SARS-CoV-2 spike-pseudotyped lentivirus (GeneCopoeia, USA). Bcell class-switching towards the IgG+IgM+- positive phenotypes was noted (~50-fold increase vs. mock, P < 0.05). A significant increase was observed in the CD8+TEM population of the MIX1 (~2-fold, P < 0.05) and MIX2 (~4.7-fold, P < 0.05) treated samples. CD8+TEMRA increased when PBMCs were treated with MIX2 (9.63% ± 0.90, P < 0.05) vs. mock (2.63% ± 1.96). Class-switched memory B cells were the dominant antigen-specific cells in primary reactions. We indicated a correlation between the protection offered by vaccine regimens and their ability to induce high frequencies of multifunctional T cells.
筛选有效的疫苗需要对其体外和体内免疫原性进行广泛的研究。我们使用基于 PBMC 的系统来评估 CD4+ T 细胞、CD8+ T 细胞和 CD19+ B 细胞在不同抗原和佐剂组合刺激下的变化。我们使用流式细胞术和两种不同的腺病毒佐剂研究了活化机制,这两种佐剂的特点是存在或不存在 ICOS 和 CD40 受体的成本刺激配体。我们的研究确定了细胞靶点和分子机制,这些靶点和机制驱动着正在进行的切换-抗体多样化。经免疫原性配方处理后,类调换记忆B细胞是主要的前体细胞(95.03% ± 0.38 vs. 模拟 82.33% ± 0.45,P < 0.05),免疫原性配方包括:带有或不带有ICOS和CD40配体的腺病毒(MIX1)、重组受体结合域(rRBD)和Lentifect™ SARS-CoV-2尖峰伪型慢病毒(GeneCopoeia,美国)。结果发现,B细胞向IgG+IgM+-阳性表型转变(与模拟相比增加了约50倍,P < 0.05)。经 MIX1(~2 倍,P < 0.05)和 MIX2(~4.7 倍,P < 0.05)处理的样本中 CD8+TEM 群体明显增加。用 MIX2(9.63% ± 0.90,P < 0.05)与模拟(2.63% ± 1.96)处理 PBMCs 时,CD8+TEMRA 增加。类调换记忆 B 细胞是原发反应中最主要的抗原特异性细胞。我们发现疫苗方案提供的保护与它们诱导高频率多功能 T 细胞的能力之间存在相关性。
{"title":"Induction of an immune response by a nonreplicating adenoviruses-based formulation versus a commercial pseudo-SARS-CoV-2 vaccine.","authors":"Joanna Baran, Łukasz Kuryk, Mariangela Garofalo, Katarzyna Pancer, Magdalena Wieczorek, Michalina Kazek, Monika Staniszewska","doi":"10.5114/bta.2024.141805","DOIUrl":"https://doi.org/10.5114/bta.2024.141805","url":null,"abstract":"<p><p>Screening for effective vaccines requires broad studies on their immunogenicity <i>in vitro</i> and <i>ex vivo</i> . We used a PBMC-based system to assess changes in CD4<sup>+</sup> T cells, CD8<sup>+</sup> T cells, and CD19<sup>+</sup> B cells upon stimulation with different combinations of antigens and adjuvants. We studied the activation mechanism using flow cytometry and two different adenoviral adjuvants characterized by the presence or absence of costimulatory ligands for the ICOS and CD40 receptors. Our studies identified the cellular targets and molecular mechanisms driving ongoing switched-antibody diversification. Class-switched memory B cells were the main precursor cells (95.03% ± 0.38 vs. mock 82.33% ± 0.45, <i>P</i> < 0.05) after treatment with the immunogenic formula: adenovirus armed (MIX1) or not (MIX2) with the ICOS and CD40 ligand, the recombinant receptor binding domain (rRBD), and Lentifect™ SARS-CoV-2 spike-pseudotyped lentivirus (GeneCopoeia, USA). Bcell class-switching towards the IgG<sup>+</sup>IgM<sup>+</sup>- positive phenotypes was noted (~50-fold increase vs. mock, <i>P</i> < 0.05). A significant increase was observed in the CD8<sup>+</sup>T<sub>EM</sub> population of the MIX1 (~2-fold, <i>P</i> < 0.05) and MIX2 (~4.7-fold, <i>P</i> < 0.05) treated samples. CD8<sup>+</sup>T<sub>EMRA</sub> increased when PBMCs were treated with MIX2 (9.63% ± 0.90, <i>P</i> < 0.05) vs. mock (2.63% ± 1.96). Class-switched memory B cells were the dominant antigen-specific cells in primary reactions. We indicated a correlation between the protection offered by vaccine regimens and their ability to induce high frequencies of multifunctional T cells.</p>","PeriodicalId":94371,"journal":{"name":"Biotechnologia","volume":"105 3","pages":"263-272"},"PeriodicalIF":0.0,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11492889/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142515775","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-30eCollection Date: 2024-01-01DOI: 10.5114/bta.2024.141803
Anjana Kumari, Avinash K Nagpal, Jatinder K Katnoria
Plant growth regulators (PGRs) control signaling networks and developmental processes involved in plant responses to various biotic and abiotic stresses, making it crucial to study PGRs in vitro. The protocol for micropropagation of Solanum lycopersicum L., following callus induction and regeneration through explants such as internodal segments, leaves, and nodal segments, was established during the present study. Explants were inoculated on Murashige and Skoog (MS) medium supplemented with different plant growth regulators like BA (6-benzylaminopurine), 2,4-D (2,4-dichlorophenoxyacetic acid), BA + 2,4-D, IAA (Indoleacetic acid), IBA (Indolebutyric acid), and NAA (Naphthaleneacetic acid). It was observed that among all explants, the nodal segment showed maximum callus induction (83.33%) and multiplication (86.67%) at 0.25 mg/l of 2,4-D; the highest shoot number (3.33) at 0.5 mg/l of IAA + 0.5 mg/l of BA; the greatest shoot length (7.57 cm) at 0.75 mg/l of BA; root induction (80.95%), root number (21.88), and root length (10.62 cm) at 1 mg/l of IAA. Additionally, the maximum fresh weight (2.448 g) was observed at 0.5 mg/l of BA, while the highest dry weight (0.172 g) and dry matter content (14.25%) were noted at 1 mg/l of BA + 1 mg/l of 2,4-D for the internodal segment. Results of the present study revealed that among different explants, the best response was given by nodal segments, followed by internodal segments. Among the different PGRs, 2,4-D resulted in the highest callus induction and multiplication percentage.
植物生长调节剂(PGRs)控制植物对各种生物和非生物胁迫的信号网络和发育过程,因此离体研究植物生长调节剂至关重要。本研究建立了茄果类植物(Solanum lycopersicum L.)的微繁殖方案,即通过节间段、叶片和节段等外植体进行胼胝体诱导和再生。将外植体接种到添加了不同植物生长调节剂(如 BA(6-苄基氨基嘌呤)、2,4-D(2,4-二氯苯氧乙酸)、BA + 2,4-D、IAA(吲哚乙酸)、IBA(吲哚丁酸)和 NAA(萘乙酸))的 Murashige and Skoog(MS)培养基上。据观察,在所有外植体中,节段在 2,4-D 浓度为 0.25 毫克/升时,胼胝体诱导率(83.33%)和繁殖率(86.67%)最高;在 IAA 浓度为 0.5 毫克/升 + BA 浓度为 0.5 毫克/升时,芽数(3.33)最高;在 BA 浓度为 0.75 毫克/升时,芽长(7.57 厘米)最大;在 IAA 浓度为 1 毫克/升时,根诱导率(80.95%)、根数(21.88)和根长(10.62 厘米)最大。此外,在使用 0.5 毫克/升 BA 时,鲜重(2.448 克)最大,而在使用 1 毫克/升 BA + 1 毫克/升 2,4-D 时,节间段的干重(0.172 克)和干物质含量(14.25%)最高。本研究结果表明,在不同的外植体中,节段的反应最好,其次是节间段。在不同的植物生长调节剂中,2,4-D 的胼胝体诱导率和繁殖率最高。
{"title":"Potential of some explants for callus induction and plantlet regeneration in <i>Solanum lycopersicum</i> L. under treatment of different plant growth regulators.","authors":"Anjana Kumari, Avinash K Nagpal, Jatinder K Katnoria","doi":"10.5114/bta.2024.141803","DOIUrl":"https://doi.org/10.5114/bta.2024.141803","url":null,"abstract":"<p><p>Plant growth regulators (PGRs) control signaling networks and developmental processes involved in plant responses to various biotic and abiotic stresses, making it crucial to study PGRs <i>in vitro</i>. The protocol for micropropagation of <i>Solanum lycopersicum</i> L., following callus induction and regeneration through explants such as internodal segments, leaves, and nodal segments, was established during the present study. Explants were inoculated on Murashige and Skoog (MS) medium supplemented with different plant growth regulators like BA (6-benzylaminopurine), 2,4-D (2,4-dichlorophenoxyacetic acid), BA + 2,4-D, IAA (Indoleacetic acid), IBA (Indolebutyric acid), and NAA (Naphthaleneacetic acid). It was observed that among all explants, the nodal segment showed maximum callus induction (83.33%) and multiplication (86.67%) at 0.25 mg/l of 2,4-D; the highest shoot number (3.33) at 0.5 mg/l of IAA + 0.5 mg/l of BA; the greatest shoot length (7.57 cm) at 0.75 mg/l of BA; root induction (80.95%), root number (21.88), and root length (10.62 cm) at 1 mg/l of IAA. Additionally, the maximum fresh weight (2.448 g) was observed at 0.5 mg/l of BA, while the highest dry weight (0.172 g) and dry matter content (14.25%) were noted at 1 mg/l of BA + 1 mg/l of 2,4-D for the internodal segment. Results of the present study revealed that among different explants, the best response was given by nodal segments, followed by internodal segments. Among the different PGRs, 2,4-D resulted in the highest callus induction and multiplication percentage.</p>","PeriodicalId":94371,"journal":{"name":"Biotechnologia","volume":"105 3","pages":"227-247"},"PeriodicalIF":0.0,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11492892/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142515779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-30eCollection Date: 2024-01-01DOI: 10.5114/bta.2024.141806
Tariku Abena, Addis Simachew
The utilization of hydrolytic enzymes in various industrial processes worldwide has gained more attention than chemical catalysts due to the high selectivity of enzymes, their ease of control, and their negligible environmental impact, as they produce very small amounts of byproducts. Xylanase is one such enzyme that catalyzes the breakdown of the β-1,4 linkage of xylan, the second most abundant renewable heteropolysaccharide and hemicellulosic constituent of the plant cell wall. Naturally, xylanase can be obtained from various sources such as mollusks, insects, plants, animals, and various microorganisms (bacteria, fungi, yeast, and algae). The utilization of xylanase could greatly improve the overall economics of processing lignocellulosic materials for the generation of monosaccharides, liquid fuels, and chemicals. Microbial xylanase is suitable for applications in food and feed, paper and pulp, textile, pharmaceutical, and biorefining industries. It has gained global attention due to its substrate specificities, biochemical properties, and various biotechnological applications. This review focuses on xylanase production, sources, fermentation processes, modes of action, purification methods, and applications in various industries.
{"title":"A review on xylanase sources, classification, mode of action, fermentation processes, and applications as a promising biocatalyst.","authors":"Tariku Abena, Addis Simachew","doi":"10.5114/bta.2024.141806","DOIUrl":"https://doi.org/10.5114/bta.2024.141806","url":null,"abstract":"<p><p>The utilization of hydrolytic enzymes in various industrial processes worldwide has gained more attention than chemical catalysts due to the high selectivity of enzymes, their ease of control, and their negligible environmental impact, as they produce very small amounts of byproducts. Xylanase is one such enzyme that catalyzes the breakdown of the β-1,4 linkage of xylan, the second most abundant renewable heteropolysaccharide and hemicellulosic constituent of the plant cell wall. Naturally, xylanase can be obtained from various sources such as mollusks, insects, plants, animals, and various microorganisms (bacteria, fungi, yeast, and algae). The utilization of xylanase could greatly improve the overall economics of processing lignocellulosic materials for the generation of monosaccharides, liquid fuels, and chemicals. Microbial xylanase is suitable for applications in food and feed, paper and pulp, textile, pharmaceutical, and biorefining industries. It has gained global attention due to its substrate specificities, biochemical properties, and various biotechnological applications. This review focuses on xylanase production, sources, fermentation processes, modes of action, purification methods, and applications in various industries.</p>","PeriodicalId":94371,"journal":{"name":"Biotechnologia","volume":"105 3","pages":"273-285"},"PeriodicalIF":0.0,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11492895/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142515773","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Probiotic bacteria are distinguished by their ability to produce various functional postbiotic metabolites. Therefore, this study aimed to explore the in vitro antioxidant, antidiabetic, and antibacterial properties of two postbiotics generated by Lactiplantibacillus plantarum O7S1 (Lpb. plantarum O7S1) during the fermentation process: cell-free supernatant (CFS) and exopolysaccharides (EPS). The antioxidant potential of these postbiotics was assessed using various radical scavenging assays and ferric-reducing antioxidant potential. The antidiabetic activity was evaluated through α-amylase inhibitory assays, while antibacterial activity was determined using agar well diffusion assays. The results of the present study revealed that CFS exhibited significant antioxidant and antidiabetic efficacy in contrast to EPS (P < 0.001). Specifically, CFS displayed remarkable scavenging ability against DPPH, hydroxyl, and superoxide radicals, with inhibition rates of 88.78, 78.91, and 34.85%, respectively, while EPS showed comparatively lower inhibition rates. Additionally, CFS demonstrated higher reducing activity (0.30 optical density units at 700 nm) and potent α-amylase inhibitory activity (95.87%) compared to EPS (67.17%) (P < 0.001). The agar well diffusion assay reported that CFS showed significant antimicrobial activity against both Gram-positive and Gram-negative pathogens, while no activity was observed with EPS. Furthermore, carbohydrate fermentation analysis indicated the strain's ability to metabolize various carbohydrates and their derivatives, potentially enhancing digestive health. These findings suggest that both CFS and EPS exhibit promising hypoglycemic, antioxidant, and antibacterial properties, making them potential candidates for incorporation into functional foods and pharmaceuticals aimed at preventing oxidative damage, diabetes, and pathogenic bacterial infections.
{"title":"Exploring the antioxidant, antidiabetic, and antibacterial potential of postbiotic compounds derived from <i>Lactiplantibacillus plantarum</i> O7S1.","authors":"Nadia Aliouche, Mohamed Sifour, Houria Ouled-Haddar","doi":"10.5114/bta.2024.141802","DOIUrl":"https://doi.org/10.5114/bta.2024.141802","url":null,"abstract":"<p><p>Probiotic bacteria are distinguished by their ability to produce various functional postbiotic metabolites. Therefore, this study aimed to explore the <i>in vitro</i> antioxidant, antidiabetic, and antibacterial properties of two postbiotics generated by <i>Lactiplantibacillus plantarum</i> O7S1 (<i>Lpb. plantarum</i> O7S1) during the fermentation process: cell-free supernatant (CFS) and exopolysaccharides (EPS). The antioxidant potential of these postbiotics was assessed using various radical scavenging assays and ferric-reducing antioxidant potential. The antidiabetic activity was evaluated through α-amylase inhibitory assays, while antibacterial activity was determined using agar well diffusion assays. The results of the present study revealed that CFS exhibited significant antioxidant and antidiabetic efficacy in contrast to EPS (<i>P</i> < 0.001). Specifically, CFS displayed remarkable scavenging ability against DPPH, hydroxyl, and superoxide radicals, with inhibition rates of 88.78, 78.91, and 34.85%, respectively, while EPS showed comparatively lower inhibition rates. Additionally, CFS demonstrated higher reducing activity (0.30 optical density units at 700 nm) and potent α-amylase inhibitory activity (95.87%) compared to EPS (67.17%) (<i>P</i> < 0.001). The agar well diffusion assay reported that CFS showed significant antimicrobial activity against both Gram-positive and Gram-negative pathogens, while no activity was observed with EPS. Furthermore, carbohydrate fermentation analysis indicated the strain's ability to metabolize various carbohydrates and their derivatives, potentially enhancing digestive health. These findings suggest that both CFS and EPS exhibit promising hypoglycemic, antioxidant, and antibacterial properties, making them potential candidates for incorporation into functional foods and pharmaceuticals aimed at preventing oxidative damage, diabetes, and pathogenic bacterial infections.</p>","PeriodicalId":94371,"journal":{"name":"Biotechnologia","volume":"105 3","pages":"215-225"},"PeriodicalIF":0.0,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11492891/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142515774","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-25eCollection Date: 2024-01-01DOI: 10.5114/bta.2024.139753
Doan Thien Thanh, Vo Kieu Oanh, Hoang Chinh Nguyen, Luong Thi My Ngan, Tran Trung Hieu
Cleistocalyx operculatus flower buds have been widely used in traditional medicine because of their rich content of bioactive constituents. In this study, we obtained seven solvent extracts from the flower buds and evaluated their total phenolic (TPC), flavonoid (TFC), tannin (TTC), triterpenoid saponin (TSC), and alkaloid (TAC) contents. We assessed antioxidant activities using the DPPH assay and also looked at antimicrobial and enzyme inhibitory effects. The water extract possessed the highest TPC (328.9 mg GAE/g extract), followed by ethanol, methanol, and hexane extracts (85.4-101.5 mg GAE/g extract). Chloroform, butanol, ethyl acetate, and ethanol extracts had high TSCs (245.4-287.2 mg OAE/g extract). The hexane extract was richest in TTC and TFC (32.7 mg CE/g extract and 81.1 mg QE/g extract, respectively). Ethanol and methanol extracts exhibited the strongest antioxidant activities (IC50 values of 25.2 and 30.3 μg/ml, respectively), followed by the water extract (IC50 of 40.2 μg/ml). The hexane extract displayed the most growth-inhibitory activity against Helicobacter pylori ATCC51932 and ATCC43504 strains and Salmonella enterica serovar Typhimurium ATCC13311 (MIC values of 0.06, 0.13, and 0.4 mg/ml, respectively). Moreover, the hexane extract revealed the strongest inhibition of H. pylori urease activity (IC50 of 4.51 μg/ml), whereas the water and methanol extracts had potent inhibitory effects on α-glucosidase activity (IC50 values of 9.9 and 15.1 μg/ml, respectively). These flower bud extracts could be used for health protection, especially in preventing bacterial infections and inhibiting enzymes associated with various human diseases. Further investigation into the application of C. operculatus flower buds in the food and pharmaceutical industries is necessary.
{"title":"Phytochemical composition, antioxidant, antibacterial, and enzyme inhibitory activities of organic extracts from flower buds of <i>Cleistocalyx operculatus</i> (Roxb.) Merr. et Perry.","authors":"Doan Thien Thanh, Vo Kieu Oanh, Hoang Chinh Nguyen, Luong Thi My Ngan, Tran Trung Hieu","doi":"10.5114/bta.2024.139753","DOIUrl":"10.5114/bta.2024.139753","url":null,"abstract":"<p><p><i>Cleistocalyx operculatus</i> flower buds have been widely used in traditional medicine because of their rich content of bioactive constituents. In this study, we obtained seven solvent extracts from the flower buds and evaluated their total phenolic (TPC), flavonoid (TFC), tannin (TTC), triterpenoid saponin (TSC), and alkaloid (TAC) contents. We assessed antioxidant activities using the DPPH assay and also looked at antimicrobial and enzyme inhibitory effects. The water extract possessed the highest TPC (328.9 mg GAE/g extract), followed by ethanol, methanol, and hexane extracts (85.4-101.5 mg GAE/g extract). Chloroform, butanol, ethyl acetate, and ethanol extracts had high TSCs (245.4-287.2 mg OAE/g extract). The hexane extract was richest in TTC and TFC (32.7 mg CE/g extract and 81.1 mg QE/g extract, respectively). Ethanol and methanol extracts exhibited the strongest antioxidant activities (IC<sub>50</sub> values of 25.2 and 30.3 μg/ml, respectively), followed by the water extract (IC<sub>50</sub> of 40.2 μg/ml). The hexane extract displayed the most growth-inhibitory activity against <i>Helicobacter pylori</i> ATCC51932 and ATCC43504 strains and <i>Salmonella enterica</i> serovar <i>Typhimurium</i> ATCC13311 (MIC values of 0.06, 0.13, and 0.4 mg/ml, respectively). Moreover, the hexane extract revealed the strongest inhibition of <i>H. pylori</i> urease activity (IC<sub>50</sub> of 4.51 μg/ml), whereas the water and methanol extracts had potent inhibitory effects on α-glucosidase activity (IC<sub>50</sub> values of 9.9 and 15.1 μg/ml, respectively). These flower bud extracts could be used for health protection, especially in preventing bacterial infections and inhibiting enzymes associated with various human diseases. Further investigation into the application of <i>C. operculatus</i> flower buds in the food and pharmaceutical industries is necessary.</p>","PeriodicalId":94371,"journal":{"name":"Biotechnologia","volume":"105 2","pages":"137-147"},"PeriodicalIF":0.0,"publicationDate":"2024-06-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11231999/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141581998","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-25eCollection Date: 2024-01-01DOI: 10.5114/bta.2024.139751
Ivo Ganchev
In this work, we evaluated the protective capacity of Spirulina platensis biomass in preserving Lactobacillus delbrueckii subsp. bulgaricus WDCM 00102. The L. bulgaricus strain was freeze-dried in the presence of S. platensis biomass and the freeze-dried samples were then stored at 5 and 25°C for varying periods. Subsequently, the samples were rehydrated and bacterial plate counts were determined. The results indicate that a concentration of 12% S. platensis biomass was highly effective in preserving L. bulgaricus. Commercial products with higher S. platensis biomass content exhibited greater protective capacity. While S. platensis biomass is well-known for its prebiotic properties, its protective role has not been previously reported or thoroughly explored. This study demonstrates the protective capacity of S. platensis biomass in preserving L. bulgaricus, a strain particularly sensitive to preservation processes.
在这项工作中,我们评估了蓝藻生物质在保存保加利亚乳杆菌 WDCM 00102 亚种方面的保护能力。保加利亚乳杆菌菌株在板蓝根螺旋藻生物质存在下被冷冻干燥,冷冻干燥后的样品分别在 5℃和 25℃下储存不同时间。随后,重新水化样品并测定细菌平板计数。结果表明,浓度为 12% 的 S. platensis 生物质对保加利亚乳杆菌的保存非常有效。S. platensis 生物质含量较高的商业产品具有更强的保护能力。虽然普氏金莎生物质因其益生元特性而闻名,但其保护作用以前还没有报道或深入探讨过。本研究证明了 S. platensis 生物质在保存保加利亚乳杆菌(一种对保存过程特别敏感的菌株)方面的保护能力。
{"title":"Impact of <i>Spirulina platensis</i> biomass on the viability of <i>Lactobacillus delbrueckii</i> subsp. <i>bulgaricus</i> strain during the freeze-drying process.","authors":"Ivo Ganchev","doi":"10.5114/bta.2024.139751","DOIUrl":"10.5114/bta.2024.139751","url":null,"abstract":"<p><p>In this work, we evaluated the protective capacity of <i>Spirulina platensis</i> biomass in preserving <i>Lactobacillus delbrueckii</i> subsp. <i>bulgaricus</i> WDCM 00102. The <i>L. bulgaricus</i> strain was freeze-dried in the presence of <i>S. platensis</i> biomass and the freeze-dried samples were then stored at 5 and 25°C for varying periods. Subsequently, the samples were rehydrated and bacterial plate counts were determined. The results indicate that a concentration of 12% <i>S. platensis</i> biomass was highly effective in preserving <i>L. bulgaricus</i>. Commercial products with higher <i>S. platensis</i> biomass content exhibited greater protective capacity. While <i>S. platensis</i> biomass is well-known for its prebiotic properties, its protective role has not been previously reported or thoroughly explored. This study demonstrates the protective capacity of <i>S. platensis</i> biomass in preserving <i>L. bulgaricus</i>, a strain particularly sensitive to preservation processes.</p>","PeriodicalId":94371,"journal":{"name":"Biotechnologia","volume":"105 2","pages":"109-119"},"PeriodicalIF":0.0,"publicationDate":"2024-06-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11231997/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141581996","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-25eCollection Date: 2024-01-01DOI: 10.5114/bta.2024.139752
Chinyere E Okafor, Ikechukwu K Ijoma, Chiamaka A Igboamalu, Chinaza E Ezebalu, Chukwuemeka F Eze, Jessica C Osita-Chikeze, Chisom E Uzor, Adaugo L Ekwuekwe
Oxidative stress-related pathologies have guided the scientific community into delving into natural product-based research on plant-based metabolites. Plant secondary metabolites serve as a valid alternative in managing oxidative stress-related pathologies. In this study, we present the secondary metabolite constituents of the polar extract (PE) and nonpolar extract (NPE) from the leaves of Bryophyllum pinnatum. These constituents were determined through qualitative and quantitative phytochemical screening. The functional groups and structures of these metabolites were determined based on FTIR and GC-MS experiments, respectively. Antioxidant and free radical scavenging (FRS) activities were determined using standard methods, including phosphomolybdenum, FRAP, DPPH, HRSA, and reducing power assays, with comparisons made to the ascorbic acid (AA) standard. Through Pearson correlation analysis, we estimated the relationship between antioxidant and FRS activities. The DPPH results revealed IC50s of 380.104 ± 0.001, 16.763 ± 0.001, and 7.684 ± 0.003 μg/ml for NPE, AA, and PE, respectively, indicating a trend of PE > AA > NPE. However, all other experiments showed a trend of AA > PE > NPE in antioxidant and FRS activities. These results showed the potential antioxidant and FRS properties of both PE and NPE. Additionally, the correlation analysis indicated a strong positive correlation between the antioxidant and FRS activities of PE and NPE. The research results suggest high antioxidant and FRS activities of PE and validate the use of B. pinnatum in managing free radical-related pathologies.
与氧化应激相关的病症引导科学界深入研究以天然产品为基础的植物代谢物。植物次生代谢物是控制氧化应激相关病症的有效替代品。在本研究中,我们介绍了从羽扇豆叶中提取的极性提取物(PE)和非极性提取物(NPE)中的次生代谢物成分。这些成分是通过定性和定量植物化学筛选确定的。根据傅立叶变换红外光谱(FTIR)和气相色谱-质谱(GC-MS)实验分别确定了这些代谢物的官能团和结构。抗氧化和自由基清除(FRS)活性采用标准方法测定,包括磷钼法、FRAP 法、DPPH 法、HRSA 法和还原力测定法,并与抗坏血酸(AA)标准进行比较。通过皮尔逊相关分析,我们估算了抗氧化活性与 FRS 活性之间的关系。DPPH 结果显示,NPE、AA 和 PE 的 IC50 分别为 380.104 ± 0.001、16.763 ± 0.001 和 7.684 ± 0.003 μg/ml,表明趋势是 PE > AA > NPE。然而,所有其他实验都表明,抗氧化和 FRS 活性的趋势是 AA > PE > NPE。这些结果表明 PE 和 NPE 都具有潜在的抗氧化和 FRS 特性。此外,相关分析表明 PE 和 NPE 的抗氧化和 FRS 活性之间存在很强的正相关性。研究结果表明 PE 具有较高的抗氧化和 FRS 活性,并验证了羽扇豆可用于治疗与自由基有关的病症。
{"title":"Secondary metabolites, spectra characterization, and antioxidant correlation analysis of the polar and nonpolar extracts of <i>Bryophyllum pinnatum</i> (Lam) Oken.","authors":"Chinyere E Okafor, Ikechukwu K Ijoma, Chiamaka A Igboamalu, Chinaza E Ezebalu, Chukwuemeka F Eze, Jessica C Osita-Chikeze, Chisom E Uzor, Adaugo L Ekwuekwe","doi":"10.5114/bta.2024.139752","DOIUrl":"10.5114/bta.2024.139752","url":null,"abstract":"<p><p>Oxidative stress-related pathologies have guided the scientific community into delving into natural product-based research on plant-based metabolites. Plant secondary metabolites serve as a valid alternative in managing oxidative stress-related pathologies. In this study, we present the secondary metabolite constituents of the polar extract (PE) and nonpolar extract (NPE) from the leaves of <i>Bryophyllum pinnatum</i>. These constituents were determined through qualitative and quantitative phytochemical screening. The functional groups and structures of these metabolites were determined based on FTIR and GC-MS experiments, respectively. Antioxidant and free radical scavenging (FRS) activities were determined using standard methods, including phosphomolybdenum, FRAP, DPPH, HRSA, and reducing power assays, with comparisons made to the ascorbic acid (AA) standard. Through Pearson correlation analysis, we estimated the relationship between antioxidant and FRS activities. The DPPH results revealed IC50s of 380.104 ± 0.001, 16.763 ± 0.001, and 7.684 ± 0.003 μg/ml for NPE, AA, and PE, respectively, indicating a trend of PE > AA > NPE. However, all other experiments showed a trend of AA > PE > NPE in antioxidant and FRS activities. These results showed the potential antioxidant and FRS properties of both PE and NPE. Additionally, the correlation analysis indicated a strong positive correlation between the antioxidant and FRS activities of PE and NPE. The research results suggest high antioxidant and FRS activities of PE and validate the use of <i>B. pinnatum</i> in managing free radical-related pathologies.</p>","PeriodicalId":94371,"journal":{"name":"Biotechnologia","volume":"105 2","pages":"121-136"},"PeriodicalIF":0.0,"publicationDate":"2024-06-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11232000/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141581999","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}