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Deciphering protective genomic factors of tumor development in pediatric Down syndrome via deep learning approach to whole genome and RNA sequencing 通过对全基因组和 RNA 测序的深度学习方法,破译小儿唐氏综合征肿瘤发生的保护性基因组因素。
IF 20.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-10-10 DOI: 10.1002/cac2.12612
Yichuan Liu, Hui-Qi Qu, Xiao Chang, Frank D Mentch, Haijun Qiu, Kenny Nguyen, Kayleigh Ostberg, Tiancheng Wang, Joseph Glessner, Hakon Hakonarson
<p>Childhood solid tumors represent a significant public health challenge worldwide, with approximately 15,000 new cases annually in the United States and an estimated 300,000 globally. Down syndrome (DS), a genetic disorder characterized by an extra full or partial copy of chromosome 21, results in distinctive developmental and physical features. Notably, individuals with DS exhibit a remarkable resilience against solid tumors compared to the general population, with an overall standardized incidence ratio (SIR) of 0.45, despite their increased susceptibility to hematologic malignancies [<span>1</span>]. This paradoxical observation has spurred extensive research aimed at uncovering the biological underpinnings of this natural resistance to solid cancers. Current theories suggest that the overexpression of specific genes on chromosome 21 may confer protective benefits (e.g. <i>RCAN1</i> contributes to antiangiogenic effects), and alterations in immune system function may enhance apoptosis and DNA repair pathways in individuals with trisomy 21 DS [<span>2</span>]. The well-established epigenetic effects of trisomy 21, which influence the entire genome, are another potential contributor to the reduced risk of solid tumors [<span>3</span>]. Nonetheless, these hypotheses face significant challenges, such as the potential oversimplification of complex genetic interactions and the lack of comprehensive genome-wide analyses. This study seeks to critically evaluate the correlations between genomic variants and cancer clinical phenotypes in patients with DS, and proposes directions for future research into the genetic and molecular mechanisms that confer cancer resistance in DS, potentially transforming our understanding and treatment of pediatric cancers.</p><p>We conducted an innovative unbiased data-driven analysis in 2,452 whole-genome sequencing (WGS) samples with both DS individuals (<i>n</i> = 635) and pediatric oncology cases (<i>n</i> = 280) within the Gabriella Miller Kids First program project (https://kidsfirstdrc.org/) housed at the Children's Hospital of Philadelphia (Supplementary Figure S1). Additionally, 284 RNA sequencing samples from human peripheral blood mononuclear cells (PBMCs), a subset of WGS samples, were also analyzed, offering unprecedented insights into the complex interplay of genetic and immunological factors influencing cancer resistance.</p><p>The importance of each variant was calculated using deep learning algorithms, and their corresponding weights to DS cancer were generated based on linear algebra models as described in the Supplementary Materials and Methods. There were 2,523 unique cancer protective variants identified based on deep learning algorithms combined with linear algebra models in exonic, intronic, non-coding RNA and 5’untranslated region (5’UTR) regions. The prevalence for cancer protective variants in the DS cancer group (89.2%) is significantly higher compared to non-DS cancer individuals (58.1%) (<i>P
儿童实体瘤是全球面临的一项重大公共卫生挑战,美国每年新增病例约 15,000 例,全球估计为 300,000 例。唐氏综合征(Down syndrome,DS)是一种遗传性疾病,其特征是21号染色体多了一个完整或部分拷贝,导致发育和身体特征与众不同。值得注意的是,尽管唐氏综合征患者对血液系统恶性肿瘤的易感性增加,但与普通人群相比,他们对实体瘤的抵抗力非常强,总体标准化发病率(SIR)为 0.45 [1]。这一自相矛盾的现象引发了广泛的研究,旨在揭示这种对实体瘤天然抵抗力的生物学基础。目前的理论认为,21 号染色体上特定基因的过度表达可能会带来保护性益处(如 RCAN1 有助于抗血管生成作用),免疫系统功能的改变可能会增强 21 三体 DS 患者的细胞凋亡和 DNA 修复途径 [2]。21 三体综合征的表观遗传效应对整个基因组都有影响,这是导致实体瘤风险降低的另一个潜在因素 [3]。然而,这些假说面临着巨大的挑战,如可能过度简化复杂的遗传相互作用,以及缺乏全面的全基因组分析。本研究旨在批判性地评估 DS 患者的基因组变异与癌症临床表型之间的相关性,并提出未来研究 DS 癌症耐药性的基因和分子机制的方向,从而有可能改变我们对儿科癌症的理解和治疗。我们对费城儿童医院加布里埃拉-米勒儿童第一计划项目(https://kidsfirstdrc.org/)中的2452份全基因组测序(WGS)样本进行了创新性的无偏数据驱动分析,其中既有DS患者(n = 635),也有儿科肿瘤病例(n = 280)(补充图S1)。此外,还分析了 284 份来自人类外周血单核细胞(PBMCs)的 RNA 测序样本(WGS 样本的一个子集),为了解影响癌症耐药性的遗传和免疫因素的复杂相互作用提供了前所未有的见解。如补充材料和方法所述,使用深度学习算法计算了每个变体的重要性,并根据线性代数模型生成了它们对 DS 癌症的相应权重。基于深度学习算法和线性代数模型,在外显子、内含子、非编码RNA和5'非翻译区(5'UTR)区域共鉴定出2,523个独特的癌症保护性变异。与非DS癌症个体(58.1%)相比,DS癌症群体中癌症保护性变异的发生率(89.2%)明显更高(P = 1.11 × 10-40),这表明本研究中发现的癌症保护性变异可能会保护DS个体免受实体瘤的侵袭。功能富集分析揭示了 WGS 发现的不同类别变异的癌症发展相关通路(补充图 S2)。值得注意的是,无论使用哪种数据库,包括基因本体(GO)、京都基因和基因组百科全书(KEGG)、进化关系蛋白质分析(PANTHER)、反应、通路和生物过程数据库(Reactome)以及基于维基的生物通路收集、维护和发布资源(WikiPath),保护性变异和易感性变异的功能术语都有所不同。共有 121 个基因在癌症保护变体和癌症易感变体及其相应基因之间出现重叠(补充表 S1-S2)。这种基因交叉的偶然性很低(P = 0.002),但在癌症重要通路(如 p53 通路)中却具有统计学意义(假发现率 [FDR] &lt; 0.001)(图 1A)。这些结果符合人们对基因在错综复杂的肿瘤发生过程中发挥多功能作用的预期[4]。变异类型分布揭示了这两类基因共有的 121 个基因中的独特模式(图 1B)。具体来说,癌症诱发变异在非同义或同义变异的外显子区域更为普遍,相比之下,癌症保护变异在非编码区域表现出更高的普遍性,这表明它们在肿瘤发生发展过程中起着调控作用。此外,与易感基因相比,癌症保护变异表现出更早的转录活性(图 1C)。这些发现表明,根据基因变异小等位基因的功能效应,重叠基因可能具有双重作用,既可能是癌症增强因子,也可能是癌症抑制因子。
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引用次数: 0
Genomic imprinting biomarkers for cervical cancer risk stratification. 用于宫颈癌风险分层的基因组印记生物标志物。
IF 20.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-10-10 DOI: 10.1002/cac2.12617
Xue Xiao, Wei Wang, Peng Bai, Ying Chen, Zhengwen Qin, Tong Cheng, Xing Li, John P Pineda, Panying Shi, Xiaonan Wang, Jianhong Wang, Lian Xu, Xuemei Gao, Huixian Zheng, Lulu Yang, Wenyi Lin, Wenbin Huang, Rulong Shen, Changjun Yue, Huixiong Xu, Felipe Batalini, Yang Liu, Ning Zhou, Yaoyao Zhang, Hanmin Liu
{"title":"Genomic imprinting biomarkers for cervical cancer risk stratification.","authors":"Xue Xiao, Wei Wang, Peng Bai, Ying Chen, Zhengwen Qin, Tong Cheng, Xing Li, John P Pineda, Panying Shi, Xiaonan Wang, Jianhong Wang, Lian Xu, Xuemei Gao, Huixian Zheng, Lulu Yang, Wenyi Lin, Wenbin Huang, Rulong Shen, Changjun Yue, Huixiong Xu, Felipe Batalini, Yang Liu, Ning Zhou, Yaoyao Zhang, Hanmin Liu","doi":"10.1002/cac2.12617","DOIUrl":"https://doi.org/10.1002/cac2.12617","url":null,"abstract":"","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":" ","pages":""},"PeriodicalIF":20.1,"publicationDate":"2024-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142399494","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Yap methylation-induced FGL1 expression suppresses anti-tumor immunity and promotes tumor progression in KRAS-driven lung adenocarcinoma Yap甲基化诱导的FGL1表达抑制了KRAS驱动的肺腺癌中的抗肿瘤免疫并促进了肿瘤进展。
IF 20.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-09-28 DOI: 10.1002/cac2.12609
Ji Jiang, Pengfei Ye, Ningning Sun, Weihua Zhu, Mei Yang, Manman Yu, Jingjing Yu, Hui Zhang, Zijie Gao, Ningjie Zhang, Shijie Guo, Yuru Ji, Siqi Li, Cuncun Zhang, Sainan Miao, Mengqi Chai, Wenmin Liu, Yue An, Jian Hong, Wei Wei, Shihao Zhang, Huan Qiu

Background

Despite significant strides in lung cancer immunotherapy, the response rates for Kirsten rat sarcoma viral oncogene homolog (KRAS)-driven lung adenocarcinoma (LUAD) patients remain limited. Fibrinogen-like protein 1 (FGL1) is a newly identified immune checkpoint target, and the study of related resistance mechanisms is crucial for improving the treatment outcomes of LUAD patients. This study aimed to elucidate the potential mechanism by which FGL1 regulates the tumor microenvironment in KRAS-mutated cancer.

Methods

The expression levels of FGL1 and SET1 histone methyltransferase (SET1A) in lung cancer were assessed using public databases and clinical samples. Lentiviruses were constructed for transduction to overexpress or silence FGL1 in lung cancer cells and mouse models. The effects of FGL1 and Yes-associated protein (Yap) on the immunoreactivity of cytotoxic T cells in tumor tissues were evaluated using immunofluorescence staining and flow cytometry. Chromatin immunoprecipitation and dual luciferase reporter assays were used to study the SET1A-directed transcriptional program.

Results

Upregulation of FGL1 expression in KRAS-mutated cancer was inversely correlated with the infiltration of CD8+ T cells. Mechanistically, KRAS activated extracellular signal-regulated kinase 1/2 (ERK1/2), which subsequently phosphorylated SET1A and increased its stability and nuclear localization. SET1A-mediated methylation of Yap led to Yap sequestration in the nucleus, thereby promoting Yap-induced transcription of FGL1 and immune evasion in KRAS-driven LUAD. Notably, dual blockade of programmed cell death-1 (PD-1) and FGL1 further increased the therapeutic efficacy of anti-PD-1 immunotherapy in LUAD patients.

Conclusion

FGL1 could be used as a diagnostic biomarker of KRAS-mutated lung cancer, and targeting the Yap-FGL1 axis could increase the efficacy of anti-PD-1 immunotherapy.

背景:尽管肺癌免疫疗法取得了长足进步,但克氏鼠肉瘤病毒癌基因同源物(KRAS)驱动的肺腺癌(LUAD)患者的应答率仍然有限。纤维蛋白原样蛋白1(FGL1)是新发现的免疫检查点靶点,研究相关的耐药机制对于改善LUAD患者的治疗效果至关重要。本研究旨在阐明FGL1调控KRAS突变癌症肿瘤微环境的潜在机制:方法:利用公共数据库和临床样本评估了FGL1和SET1组蛋白甲基转移酶(SET1A)在肺癌中的表达水平。构建了慢病毒,用于在肺癌细胞和小鼠模型中转导过表达或沉默FGL1。利用免疫荧光染色和流式细胞术评估了FGL1和Yes相关蛋白(Yap)对肿瘤组织中细胞毒性T细胞免疫活性的影响。染色质免疫沉淀和双荧光素酶报告实验用于研究 SET1A 引导的转录程序:结果:KRAS突变癌症中FGL1表达的上调与CD8+ T细胞的浸润成反比。从机理上讲,KRAS激活了细胞外信号调节激酶1/2(ERK1/2),ERK1/2随后磷酸化了SET1A,增加了其稳定性和核定位。SET1A 介导的 Yap 甲基化导致 Yap 封存在细胞核中,从而促进 Yap 诱导的 FGL1 转录和 KRAS 驱动的 LUAD 的免疫逃避。值得注意的是,程序性细胞死亡-1(PD-1)和FGL1的双重阻断进一步提高了抗PD-1免疫疗法对LUAD患者的疗效:结论:FGL1可作为KRAS突变肺癌的诊断生物标记物,靶向Yap-FGL1轴可提高抗PD-1免疫疗法的疗效。
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引用次数: 0
Single-cell transcriptomic atlas reveals immune and metabolism perturbation of depression in the pathogenesis of breast cancer 单细胞转录组图谱揭示了乳腺癌发病机制中免疫和代谢对抑郁症的干扰
IF 20.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-09-19 DOI: 10.1002/cac2.12603
Lingling Wu, Junwei Liu, Yimeng Geng, Jianwen Fang, Xingle Gao, Jianbo Lai, Minya Yao, Shaojia Lu, Weiwei Yin, Peifen Fu, Wei Chen, Shaohua Hu
<p>Epidemiological evidence indicates that major depressive disorder (MDD) may predispose the development and prognosis of breast cancer (BC) in females [<span>1</span>]. However, the mechanisms linking these phenotypes are not fully understood. Chronic stress, a hallmark of depression, has been underscored to affect anti-tumor immunity, tumor metabolic reprogramming, hormone synthesis in BC [<span>2, 3</span>], and increase tumor metastasis [<span>4</span>], but there is a lack of detailed cellular-level characterization of how MDD history affects the tumorigenesis of BC. This study explored the single-cell atlas of multiple tissues from BC patients with and without a history of MDD for characterizing the potential molecular alternations in their tumorigenesis (Figure 1A).</p><p>Paired primary tumor tissues (<i>n</i> = 10), adjacent normal tissues (<i>n</i> = 7), and peripheral blood samples (<i>n</i> = 10) were collected from a cohort of 10 BC patients, 5 of whom had a history of MDD (Supplementary Table S1). All BC patients had estrogen receptor (ER)-positive tumors and were further predicted as Luminal A (<i>n</i> = 9) and B subtypes (<i>n</i> = 1) (Supplementary Table S2). Further details on patient recruitment, sample handling, and single-cell data analysis are provided in Supplementary Methods. In total, we obtained 224,557 single cells and further annotated them into major cell subsets based on lineage markers and copy number variations [<span>5</span>] (Figure 1B, Supplementary Figure S1A-B). Aneuploid cells in primary tumor tissues were obtained (Supplementary Table S3) to characterize their phenotypic differences in BC patients with MDD history (BC-MDD) or not (BC-Ctrl). The Uniform Manifold Approximation and Projection (UMAP) of unintegrated aneuploid cells revealed intrinsic differences across individual patients (Supplementary Figure S1C). Downstream functional profiling analysis identified distinct immune response pathways in BC-MDD and BC-Ctrl groups and enrichment of the oxidative phosphorylation (OXPHOS) pathway in BC-Ctrl tumors (Supplementary Figure S1D-E). Cellular Gene Set Variation Analysis (GSVA) [<span>6</span>] confirmed the distinct metabolic phenotypes between BC-MDD and BC-Ctrl groups (Figure 1C). Additionally, utilizing predefined gene module (GM) signatures of BC tumor cells [<span>7</span>], we observed specific restraint of GM4 and GM6 in BC-MDD (Supplementary Figure S1F-G). GM6 encompasses various antigen presentation genes, aligning with the observed downregulation of major histocompatibility complex class I (MHC-I) class genes in BC-MDD tumor cells (Supplementary Figure S1H).</p><p>Upon re-clustering 12,371 normal epithelial cells within primary breast tumor and adjacent normal tissues from the 10 patients, we identified 9 cell clusters, including luminal hormone-responsive (LumHR), luminal secretory (LumSec), and myoepithelial cells [<span>8</span>] (Supplementary Figure S2A-B). Distribution analysis suggested
流行病学证据表明,重度抑郁障碍(MDD)可能导致女性乳腺癌(BC)的发生和预后[1]。然而,这些表型之间的关联机制尚不完全清楚。慢性应激是抑郁症的特征之一,已被强调会影响抗肿瘤免疫、肿瘤代谢重编程、乳腺癌激素合成[2, 3],并增加肿瘤转移[4],但目前还缺乏关于MDD病史如何影响乳腺癌肿瘤发生的详细细胞水平表征。本研究探索了有和无 MDD 史的 BC 患者多个组织的单细胞图谱,以表征其肿瘤发生过程中的潜在分子变化(图 1A)。(A)本研究中单细胞分析的实验设计。(B) 肿瘤组织、邻近正常组织和外周血样本单细胞的 UMAP 图,按主要细胞类型着色。(C) BC-Ctrl 组和 BC-MDD 组非整倍体细胞中 OXPHOS(左)和糖酵解(右)通路的富集比较。(D) LumSec-2(左)和 LumSec-3(右)簇前 50 个高表达基因特征对 TCGA-BRCA 队列中雌激素受体阳性患者预后预测贡献的总生存率分析。(E) BC-Ctrl和BC-MDD样本组之间内皮细胞、成纤维细胞和周细胞的上调差异表达基因重叠的维恩图(左)以及共享上调基因的通路富集分析(右)。(F)BC-Ctrl 和 BC-MDD 患者原发肿瘤组织中 CD8+ T 细胞(左)和巨噬细胞(右)差异表达基因的通路富集分析。(G)BC-Ctrl(左)和 BC-MDD(右)样本中主要细胞亚型的配体和受体相互作用的数量。(H)BC-MDD 和 BC-Ctrl 原发性肿瘤组织中各主要细胞亚型的传入和传出相互作用的变化。缩写:SCRNA-seq,单细胞 RNA 测序;BC,乳腺癌;MDD,重度抑郁症;UMAP,均匀流形近似和投影;OXPHOS,氧化磷酸化;GSVA,基因组变异分析;LumSec,管腔分泌细胞;DEGs,差异表达基因。研究人员收集了10名BC患者的配对原发肿瘤组织(n = 10)、邻近正常组织(n = 7)和外周血样本(n = 10),其中5名患者有MDD病史(补充表S1)。所有 BC 患者的肿瘤均为雌激素受体(ER)阳性,并被进一步预测为腔隙 A 亚型(9 例)和 B 亚型(1 例)(补充表 S2)。关于患者招募、样本处理和单细胞数据分析的更多详情,请参阅补充方法。我们总共获得了 224,557 个单细胞,并根据系谱标记和拷贝数变异[5]将它们进一步注释为主要的细胞亚群(图 1B,补充图 S1A-B)。我们还获得了原发肿瘤组织中的非整倍体细胞(补充表 S3),以确定它们在有 MDD 病史(BC-MDD)或无 MDD 病史(BC-Ctrl)的 BC 患者中的表型差异。未整合的非整倍体细胞的均匀簇逼近和投影(UMAP)显示了不同患者的内在差异(补充图 S1C)。下游功能谱分析发现,BC-MDD 组和 BC-Ctrl 组的免疫反应通路截然不同,氧化磷酸化(OXPHOS)通路在 BC-Ctrl 肿瘤中富集(补充图 S1D-E)。细胞基因组变异分析(GSVA)[6] 证实了 BC-MDD 组和 BC-Ctrl 组之间不同的代谢表型(图 1C)。此外,利用预定义的 BC 肿瘤细胞基因模块(GM)特征[7],我们观察到 BC-MDD 中 GM4 和 GM6 的特异性抑制(补充图 S1F-G)。GM6包括各种抗原递呈基因,与在BC-MDD肿瘤细胞中观察到的主要组织相容性复合体I类(MHC-I)类基因的下调相一致(补充图S1H)。在对 10 名患者的原发性乳腺肿瘤和邻近正常组织中的 12,371 个正常上皮细胞重新聚类后,我们发现了 9 个细胞群,包括管腔激素反应性细胞(LumHR)、管腔分泌性细胞(LumSec)和肌上皮细胞[8](补充图 S2A-B)。分布分析表明,LumSec-2 和 -3 簇可能在 BC-Ctrl 患者的原发肿瘤组织中富集(补充图 S2C-E)。随后,我们研究了这些 BC-Ctrl 富集的肿瘤上皮细胞在肿瘤发生和预后中的潜在作用。我们利用癌症基因组图谱--乳腺浸润性癌(TCGA-BRCA)数据集[9],对这些细胞集群的前 50 个差异表达基因(DEGs)进行了评估。
{"title":"Single-cell transcriptomic atlas reveals immune and metabolism perturbation of depression in the pathogenesis of breast cancer","authors":"Lingling Wu,&nbsp;Junwei Liu,&nbsp;Yimeng Geng,&nbsp;Jianwen Fang,&nbsp;Xingle Gao,&nbsp;Jianbo Lai,&nbsp;Minya Yao,&nbsp;Shaojia Lu,&nbsp;Weiwei Yin,&nbsp;Peifen Fu,&nbsp;Wei Chen,&nbsp;Shaohua Hu","doi":"10.1002/cac2.12603","DOIUrl":"10.1002/cac2.12603","url":null,"abstract":"&lt;p&gt;Epidemiological evidence indicates that major depressive disorder (MDD) may predispose the development and prognosis of breast cancer (BC) in females [&lt;span&gt;1&lt;/span&gt;]. However, the mechanisms linking these phenotypes are not fully understood. Chronic stress, a hallmark of depression, has been underscored to affect anti-tumor immunity, tumor metabolic reprogramming, hormone synthesis in BC [&lt;span&gt;2, 3&lt;/span&gt;], and increase tumor metastasis [&lt;span&gt;4&lt;/span&gt;], but there is a lack of detailed cellular-level characterization of how MDD history affects the tumorigenesis of BC. This study explored the single-cell atlas of multiple tissues from BC patients with and without a history of MDD for characterizing the potential molecular alternations in their tumorigenesis (Figure 1A).&lt;/p&gt;&lt;p&gt;Paired primary tumor tissues (&lt;i&gt;n&lt;/i&gt; = 10), adjacent normal tissues (&lt;i&gt;n&lt;/i&gt; = 7), and peripheral blood samples (&lt;i&gt;n&lt;/i&gt; = 10) were collected from a cohort of 10 BC patients, 5 of whom had a history of MDD (Supplementary Table S1). All BC patients had estrogen receptor (ER)-positive tumors and were further predicted as Luminal A (&lt;i&gt;n&lt;/i&gt; = 9) and B subtypes (&lt;i&gt;n&lt;/i&gt; = 1) (Supplementary Table S2). Further details on patient recruitment, sample handling, and single-cell data analysis are provided in Supplementary Methods. In total, we obtained 224,557 single cells and further annotated them into major cell subsets based on lineage markers and copy number variations [&lt;span&gt;5&lt;/span&gt;] (Figure 1B, Supplementary Figure S1A-B). Aneuploid cells in primary tumor tissues were obtained (Supplementary Table S3) to characterize their phenotypic differences in BC patients with MDD history (BC-MDD) or not (BC-Ctrl). The Uniform Manifold Approximation and Projection (UMAP) of unintegrated aneuploid cells revealed intrinsic differences across individual patients (Supplementary Figure S1C). Downstream functional profiling analysis identified distinct immune response pathways in BC-MDD and BC-Ctrl groups and enrichment of the oxidative phosphorylation (OXPHOS) pathway in BC-Ctrl tumors (Supplementary Figure S1D-E). Cellular Gene Set Variation Analysis (GSVA) [&lt;span&gt;6&lt;/span&gt;] confirmed the distinct metabolic phenotypes between BC-MDD and BC-Ctrl groups (Figure 1C). Additionally, utilizing predefined gene module (GM) signatures of BC tumor cells [&lt;span&gt;7&lt;/span&gt;], we observed specific restraint of GM4 and GM6 in BC-MDD (Supplementary Figure S1F-G). GM6 encompasses various antigen presentation genes, aligning with the observed downregulation of major histocompatibility complex class I (MHC-I) class genes in BC-MDD tumor cells (Supplementary Figure S1H).&lt;/p&gt;&lt;p&gt;Upon re-clustering 12,371 normal epithelial cells within primary breast tumor and adjacent normal tissues from the 10 patients, we identified 9 cell clusters, including luminal hormone-responsive (LumHR), luminal secretory (LumSec), and myoepithelial cells [&lt;span&gt;8&lt;/span&gt;] (Supplementary Figure S2A-B). Distribution analysis suggested","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":"44 11","pages":"1311-1315"},"PeriodicalIF":20.1,"publicationDate":"2024-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cac2.12603","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142269900","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Local TSH/TSHR signaling promotes CD8+ T cell exhaustion and immune evasion in colorectal carcinoma 局部 TSH/TSHR 信号促进结直肠癌 CD8+ T 细胞衰竭和免疫逃避
IF 20.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-09-16 DOI: 10.1002/cac2.12605
Sisi Zeng, Huiling Hu, Zhiyang Li, Qi Hu, Rong Shen, Mingzhou Li, Yunshi Liang, Zuokang Mao, Yandong Zhang, Wanqi Zhan, Qin Zhu, Feifei Wang, Jianbiao Xiao, Bohan Xu, Guanglong Liu, Yanan Wang, Bingsong Li, Shaowan Xu, Zhaowen Zhang, Ceng Zhang, Zhizhang Wang, Li Liang

Background

Dysfunction of CD8+ T cells in the tumor microenvironment (TME) contributes to tumor immune escape and immunotherapy tolerance. The effects of hormones such as leptin, steroid hormones, and glucocorticoids on T cell function have been reported previously. However, the mechanism underlying thyroid-stimulating hormone (TSH)/thyroid-stimulating hormone receptor (TSHR) signaling in CD8+ T cell exhaustion and tumor immune evasion remain poorly understood. This study was aimed at investigating the effects of TSH/TSHR signaling on the function of CD8+ T cells and immune evasion in colorectal cancer (CRC).

Methods

TSHR expression levels in CD8+ T cells were assessed with immunofluorescence and flow cytometry. Functional investigations involved manipulation of TSHR expression in cellular and mouse models to study its role in CD8+ T cells. Mechanistic insights were mainly gained through RNA-sequencing, Western blotting, chromatin immunoprecipitation and luciferase activity assay. Immunofluorescence, flow cytometry and Western blotting were used to investigate the source of TSH and TSHR in CRC tissues.

Results

TSHR was highly expressed in cancer cells and CD8+ T cells in CRC tissues. TSH/TSHR signaling was identified as the intrinsic pathway promoting CD8+ T cell exhaustion. Conditional deletion of TSHR in CD8+ tumor-infiltrating lymphocytes (TILs) improved effector differentiation and suppressed the expression of immune checkpoint receptors such as programmed cell death 1 (PD-1) and hepatitis A virus cellular receptor 2 (HAVCR2 or TIM3) through the protein kinase A (PKA)/cAMP-response element binding protein (CREB) signaling pathway. CRC cells secreted TSHR via exosomes to increase the TSHR level in CD8+ T cells, resulting in immunosuppression in the TME. Myeloid-derived suppressor cells (MDSCs) was the main source of TSH within the TME. Low expression of TSHR in CRC was a predictor of immunotherapy response.

Conclusions

The present findings highlighted the role of endogenous TSH/TSHR signaling in CD8+ T cell exhaustion and immune evasion in CRC. TSHR may be suitable as a predictive and therapeutic biomarker in CRC immunotherapy.

肿瘤微环境(TME)中的 CD8+ T 细胞功能失调会导致肿瘤免疫逃逸和免疫治疗耐受。瘦素、类固醇激素和糖皮质激素等激素对T细胞功能的影响已有报道。然而,促甲状腺激素(TSH)/促甲状腺激素受体(TSHR)信号在CD8+ T细胞衰竭和肿瘤免疫逃避中的作用机制仍不甚明了。本研究旨在探讨TSH/TSHR信号对CD8+ T细胞功能和结直肠癌(CRC)免疫逃避的影响。
{"title":"Local TSH/TSHR signaling promotes CD8+ T cell exhaustion and immune evasion in colorectal carcinoma","authors":"Sisi Zeng,&nbsp;Huiling Hu,&nbsp;Zhiyang Li,&nbsp;Qi Hu,&nbsp;Rong Shen,&nbsp;Mingzhou Li,&nbsp;Yunshi Liang,&nbsp;Zuokang Mao,&nbsp;Yandong Zhang,&nbsp;Wanqi Zhan,&nbsp;Qin Zhu,&nbsp;Feifei Wang,&nbsp;Jianbiao Xiao,&nbsp;Bohan Xu,&nbsp;Guanglong Liu,&nbsp;Yanan Wang,&nbsp;Bingsong Li,&nbsp;Shaowan Xu,&nbsp;Zhaowen Zhang,&nbsp;Ceng Zhang,&nbsp;Zhizhang Wang,&nbsp;Li Liang","doi":"10.1002/cac2.12605","DOIUrl":"10.1002/cac2.12605","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background</h3>\u0000 \u0000 <p>Dysfunction of CD8<sup>+</sup> T cells in the tumor microenvironment (TME) contributes to tumor immune escape and immunotherapy tolerance. The effects of hormones such as leptin, steroid hormones, and glucocorticoids on T cell function have been reported previously. However, the mechanism underlying thyroid-stimulating hormone (TSH)/thyroid-stimulating hormone receptor (TSHR) signaling in CD8<sup>+</sup> T cell exhaustion and tumor immune evasion remain poorly understood. This study was aimed at investigating the effects of TSH/TSHR signaling on the function of CD8<sup>+</sup> T cells and immune evasion in colorectal cancer (CRC).</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>TSHR expression levels in CD8<sup>+</sup> T cells were assessed with immunofluorescence and flow cytometry. Functional investigations involved manipulation of TSHR expression in cellular and mouse models to study its role in CD8<sup>+</sup> T cells. Mechanistic insights were mainly gained through RNA-sequencing, Western blotting, chromatin immunoprecipitation and luciferase activity assay. Immunofluorescence, flow cytometry and Western blotting were used to investigate the source of TSH and TSHR in CRC tissues.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>TSHR was highly expressed in cancer cells and CD8<sup>+</sup> T cells in CRC tissues. TSH/TSHR signaling was identified as the intrinsic pathway promoting CD8<sup>+</sup> T cell exhaustion. Conditional deletion of TSHR in CD8<sup>+</sup> tumor-infiltrating lymphocytes (TILs) improved effector differentiation and suppressed the expression of immune checkpoint receptors such as programmed cell death 1 (PD-1) and hepatitis A virus cellular receptor 2 (HAVCR2 or TIM3) through the protein kinase A (PKA)/cAMP-response element binding protein (CREB) signaling pathway. CRC cells secreted TSHR via exosomes to increase the TSHR level in CD8<sup>+</sup> T cells, resulting in immunosuppression in the TME. Myeloid-derived suppressor cells (MDSCs) was the main source of TSH within the TME. Low expression of TSHR in CRC was a predictor of immunotherapy response.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>The present findings highlighted the role of endogenous TSH/TSHR signaling in CD8<sup>+</sup> T cell exhaustion and immune evasion in CRC. TSHR may be suitable as a predictive and therapeutic biomarker in CRC immunotherapy.</p>\u0000 </section>\u0000 </div>","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":"44 11","pages":"1287-1310"},"PeriodicalIF":20.1,"publicationDate":"2024-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cac2.12605","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142269897","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Perioperative toripalimab plus neoadjuvant chemotherapy might improve outcomes in resectable esophageal cancer: an interim analysis of a phase III randomized clinical trial 围手术期托利帕利单抗加新辅助化疗可改善可切除食管癌的预后:一项III期随机临床试验的中期分析。
IF 20.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-09-02 DOI: 10.1002/cac2.12604
Yan Zheng, Guanghui Liang, Dongfeng Yuan, Xianben Liu, Yufeng Ba, Zimin Qin, Sining Shen, Zhenxuan Li, Haibo Sun, Baoxing Liu, Quanli Gao, Peng Li, Zongfei Wang, Shilei Liu, Jianping Zhu, Haoran Wang, Haibo Ma, Zhenzhen Liu, Fei Zhao, Jun Zhang, He Zhang, Daoyuan Wu, Jinrong Qu, Jie Ma, Peng Zhang, Wenjie Ma, Ming Yan, Yongkui Yu, Qing Li, Jiangong Zhang, Wenqun Xing

Background

In the era of immunotherapy, neoadjuvant immunochemotherapy (NAIC) for the treatment of locally advanced esophageal squamous cell carcinoma (ESCC) is used clinically but lacks of high-level clinical evidence. This study aimed to compare the safety and long-term efficacy of NAIC followed by minimally invasive esophagectomy (MIE) with those of neoadjuvant chemotherapy (NAC) followed by MIE.

Methods

A prospective, single-center, open-label, randomized phase III clinical trial was conducted at Henan Cancer Hospital, Zhengzhou, China. Patients were randomly assigned to receive either neoadjuvant toripalimab (240 mg) plus paclitaxel (175 mg/m2) + cisplatin (75 mg/m2) (toripalimab group) or paclitaxel + cisplatin alone (chemotherapy group) every 3 weeks for 2 cycles. After surgery, the toripalimab group received toripalimab (240 mg every 3 weeks for up to 6 months). The primary endpoint was event-free survival (EFS). The pathological complete response (pCR) and overall survival (OS) were key secondary endpoints. Adverse events (AEs) and quality of life were also assessed.

Results

Between May 15, 2020 and August 13, 2021, 252 ESCC patients ranging from T1N1-3M0 to T2-3N0-3M0 were enrolled for interim analysis, with 127 in the toripalimab group and 125 in the chemotherapy group. The 1-year EFS rate was 77.9% in the toripalimab group compared to 64.3% in the chemotherapy group (hazard ratio [HR] = 0.62; 95% confidence interval [CI] = 0.39 to 1.00; P = 0.05). The 1-year OS rates were 94.1% and 83.0% in the toripalimab and chemotherapy groups, respectively (HR = 0.48; 95% CI = 0.24 to 0.97; P = 0.037). The patients in the toripalimab group had a higher pCR rate (18.6% vs. 4.6%; P = 0.001). The rates of postoperative Clavien-Dindo grade IIIb or higher morbidity were 9.8% in the toripalimab group and 6.8% in the chemotherapy group, with no significant difference observed (P = 0.460). The rates of grade 3 or 4 treatment-related AEs did not differ between the two groups (12.5% versus 12.4%).

Conclusions

The interim results of this ongoing trial showed that in resectable ESCC, the addition of perioperative toripalimab to NAC is safe, may improve OS and might change the standard treatment in the future.

背景:在免疫疗法时代,新辅助免疫化疗(NAIC)被用于治疗局部晚期食管鳞状细胞癌(ESCC),但缺乏高水平的临床证据。本研究旨在比较新辅助化疗(NAC)后进行微创食管切除术(MIE)与新辅助化疗后进行微创食管切除术(MIE)的安全性和长期疗效:中国郑州市河南省肿瘤医院开展了一项前瞻性、单中心、开放标签、随机III期临床试验。患者被随机分配接受新辅助托瑞帕利单抗(240毫克)+紫杉醇(175毫克/平方米)+顺铂(75毫克/平方米)(托瑞帕利单抗组)或单独紫杉醇+顺铂(化疗组)治疗,每3周1次,共2个周期。手术后,托里帕利单抗组接受托里帕利单抗治疗(每3周240毫克,最长6个月)。主要终点是无事件生存期(EFS)。病理完全反应(pCR)和总生存期(OS)是次要终点。此外,还对不良事件(AEs)和生活质量进行了评估:2020年5月15日至2021年8月13日,252名T1N1-3M0至T2-3N0-3M0的ESCC患者入组进行中期分析,其中托利帕单抗组127人,化疗组125人。托利帕利单抗组的1年EFS率为77.9%,化疗组为64.3%(危险比[HR] = 0.62;95%置信区间[CI] = 0.39至1.00;P = 0.05)。托利帕利单抗组和化疗组的1年OS率分别为94.1%和83.0%(HR = 0.48;95% CI = 0.24至0.97;P = 0.037)。托利帕单抗组患者的 pCR 率更高(18.6% 对 4.6%;P = 0.001)。术后Clavien-Dindo IIIb级或更高的发病率在托利帕利单抗组为9.8%,在化疗组为6.8%,没有观察到显著差异(P = 0.460)。两组的3级或4级治疗相关AEs发生率没有差异(12.5%对12.4%):这项正在进行的试验的中期结果表明,对于可切除的 ESCC,在 NAC 的基础上加用围术期托利帕利单抗是安全的,可改善 OS,并有可能在未来改变标准治疗方法。
{"title":"Perioperative toripalimab plus neoadjuvant chemotherapy might improve outcomes in resectable esophageal cancer: an interim analysis of a phase III randomized clinical trial","authors":"Yan Zheng,&nbsp;Guanghui Liang,&nbsp;Dongfeng Yuan,&nbsp;Xianben Liu,&nbsp;Yufeng Ba,&nbsp;Zimin Qin,&nbsp;Sining Shen,&nbsp;Zhenxuan Li,&nbsp;Haibo Sun,&nbsp;Baoxing Liu,&nbsp;Quanli Gao,&nbsp;Peng Li,&nbsp;Zongfei Wang,&nbsp;Shilei Liu,&nbsp;Jianping Zhu,&nbsp;Haoran Wang,&nbsp;Haibo Ma,&nbsp;Zhenzhen Liu,&nbsp;Fei Zhao,&nbsp;Jun Zhang,&nbsp;He Zhang,&nbsp;Daoyuan Wu,&nbsp;Jinrong Qu,&nbsp;Jie Ma,&nbsp;Peng Zhang,&nbsp;Wenjie Ma,&nbsp;Ming Yan,&nbsp;Yongkui Yu,&nbsp;Qing Li,&nbsp;Jiangong Zhang,&nbsp;Wenqun Xing","doi":"10.1002/cac2.12604","DOIUrl":"10.1002/cac2.12604","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background</h3>\u0000 \u0000 <p>In the era of immunotherapy, neoadjuvant immunochemotherapy (NAIC) for the treatment of locally advanced esophageal squamous cell carcinoma (ESCC) is used clinically but lacks of high-level clinical evidence. This study aimed to compare the safety and long-term efficacy of NAIC followed by minimally invasive esophagectomy (MIE) with those of neoadjuvant chemotherapy (NAC) followed by MIE.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>A prospective, single-center, open-label, randomized phase III clinical trial was conducted at Henan Cancer Hospital, Zhengzhou, China. Patients were randomly assigned to receive either neoadjuvant toripalimab (240 mg) plus paclitaxel (175 mg/m<sup>2</sup>) + cisplatin (75 mg/m<sup>2</sup>) (toripalimab group) or paclitaxel + cisplatin alone (chemotherapy group) every 3 weeks for 2 cycles. After surgery, the toripalimab group received toripalimab (240 mg every 3 weeks for up to 6 months). The primary endpoint was event-free survival (EFS). The pathological complete response (pCR) and overall survival (OS) were key secondary endpoints. Adverse events (AEs) and quality of life were also assessed.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Between May 15, 2020 and August 13, 2021, 252 ESCC patients ranging from T1N1-3M0 to T2-3N0-3M0 were enrolled for interim analysis, with 127 in the toripalimab group and 125 in the chemotherapy group. The 1-year EFS rate was 77.9% in the toripalimab group compared to 64.3% in the chemotherapy group (hazard ratio [HR] = 0.62; 95% confidence interval [CI] = 0.39 to 1.00; <i>P</i> = 0.05). The 1-year OS rates were 94.1% and 83.0% in the toripalimab and chemotherapy groups, respectively (HR = 0.48; 95% CI = 0.24 to 0.97; <i>P =</i> 0.037). The patients in the toripalimab group had a higher pCR rate (18.6% vs. 4.6%; <i>P</i> = 0.001). The rates of postoperative Clavien-Dindo grade IIIb or higher morbidity were 9.8% in the toripalimab group and 6.8% in the chemotherapy group, with no significant difference observed (<i>P</i> = 0.460). The rates of grade 3 or 4 treatment-related AEs did not differ between the two groups (12.5% versus 12.4%).</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>The interim results of this ongoing trial showed that in resectable ESCC, the addition of perioperative toripalimab to NAC is safe, may improve OS and might change the standard treatment in the future.</p>\u0000 </section>\u0000 </div>","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":"44 10","pages":"1214-1227"},"PeriodicalIF":20.1,"publicationDate":"2024-09-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cac2.12604","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142104685","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unraveling the routes to distant metastases in colorectal cancer: Tumor deposits and lymph node metastases as the gateway 揭示结直肠癌远处转移的途径:以肿瘤沉积和淋巴结转移为入口。
IF 20.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-25 DOI: 10.1002/cac2.12598
Nelleke Pietronella Maria Brouwer, Ayse Selcen Oguz Erdogan, Shannon van Vliet, Natasja Rutgers, Nikki Knijn, Gesina van Lijnschoten, Jessica Juliana Tan, Johannes Hendrik Willem de Wilt, Niek Hugen, Gina Brown, Femke Simmer, Iris Dionne Nagtegaal
<p>Currently, lymph node metastases (LNM) are seen as the gateway to distant metastases in CRC and play a crucial role in the Tumor Node Metastasis (TNM) staging system [<span>1, 2</span>]. Tumor deposits (TD) have been identified as another histological feature with a strong prognostic impact but are currently only deemed clinically relevant in the absence of LNM [<span>2, 3</span>]. TD are clusters of tumor cells in the fat surrounding the bowel and are often associated with nerves, vessels and lymphatic tissue, giving the cancer cells access to multiple routes of spread [<span>4</span>].</p><p>To study whether TD could indeed form an alternative gateway to distant metastases, we have used polyG-based phylogenetics on formalin-fixed paraffin-embedded (FFPE) tissue to investigate the role of histologically defined TD and LNM in CRC evolution and distant metastatic spread to the liver and peritoneum.</p><p>We collected data from patients who were diagnosed with colorectal liver or peritoneal metastases between January 2015 and January 2022 and not previously treated with chemotherapy. DNA was isolated from the TD and LNM (Figure 1A), normal tissue (which was sampled at the edge of the resection specimen) and distant metastases. Three distinct tissue parts of the primary tumor were sampled to account for intra-tumor heterogeneity (Figure 1B), yielding a total of 480 samples (Supplementary Table S1). Polymerase chain reaction (PCR) was used to genotype up to 24 polyG regions for every sample (Supplementary Table S2). Sequentially, phylogenetic trees were constructed based on the peak distribution of all PCR results from the polyG regions using an analysis pipeline previously developed by Naxerova et al. in R software (version 4.3.1) [<span>5</span>]. Phylogenetic trees are graphical representations of the evolutionary relationship between biological entities, in this case, the different tissue samples. After quality control of PCR results (i.e., poor quality DNA), impurity (i.e., contamination of samples with non-tumorous cells, Supplementary Figure S1), and branching confidence (i.e., values < 50% were deemed unreliable), 47 CRC patients with a total of 43 individual liver metastases and 30 individual peritoneal metastases were included in the final results (Supplementary Table S3-S5). The distribution of origins (TD, LNM, primary tumor or a mix of these) was compared between the group of liver and the group of peritoneal metastases using Fisher's exact test. Potential confounding clinicopathological factors were analyzed using the Kruskal-Wallis of Fisher's exact test. <i>P</i> values < 0.05 were considered significant. Full descriptions of the materials and methods are provided in the Supplementary Materials.</p><p>Phylogenetic analysis showed that the primary tumor, TD, and LNM could be possible origins of liver metastases. An exemplary phylogenetic tree is shown in Figure 1C, where different subclones gave rise to different LNMs, and sev
在系统发育分析中,LNMs 和 TDs 都是肝转移的可能途径,并且有各自进入体循环的方式。对于淋巴结转移瘤,小鼠研究表明,肿瘤细胞既可以侵入淋巴结周围的小血管,也可以穿过淋巴系统,在胸导管处进入体循环[8]。尽管如此,关于其确切机制仍存在广泛争议,而在人类中,其机制仍不清楚。对于 TDs 而言,更广泛的看法是它们可以进入血液循环,因为这反映在它们的组织学中[4]。与文献一致,我们的研究显示 69% 的 TD 与肝转移有关,其中存在血管成分(补充图 S4)。对于腹膜转移瘤,有人提出了侵袭-转移级联的替代方案,即肿瘤细胞更直接地向腹膜迁移[7]。我们曾发现,与 LNM 相比,TD 中肿瘤细胞主动迁移至腹膜并侵入腹膜所需的分子表型表达过高[9]。因此,有能力形成TD的肿瘤细胞也有能力通过浆膜表面进一步迁移并侵入腹膜,这一点很可能比LNM中的肿瘤细胞更强。首先,虽然所有病例都符合每例 CRC 淋巴结取样超过 12 个的质量标准,而且 TD 由两名病理学家和一名专家研究员进行评分,但在切除标本取样过程中仍有可能漏掉一些 TD 或 LNM。其次,建议所有系统发育研究都使用不同的方法(如全基因组或外显子组测序)进行验证,以显示结果是否具有普遍性和稳健性[10]。第三,由于时间和经费的限制,本研究只包括了 CRC 最常见的转移部位--肝脏和腹膜。总之,通过系统发育分析,本研究表明 TDs 和 LNMs 都与 CRC 的肝脏或腹膜转移有关。此外,每个转移部位的转移来源也不同,肝脏转移与TDs和LNMs的关系相同,而腹膜转移与TDs的关系明显更多。因此,未来的研究应重点关注 TD 患者发生腹膜转移的风险是否会增加,因为这可能会影响随访和治疗决策。此外,由于我们发现大量肝转移灶和腹膜转移灶与 TDs 有关,因此应该质疑目前在对 CRC 患者进行分期时将 TDs 视为不如 LNM 重要的方法是否合理。我们建议,TDs 应得到更多关注,将其作为与 LNMs 同等重要的结节类别,并在未来的研究中继续登记:Gina Brown、Femke Simmer、Iris Dionne Nagtegaal。方法论:Nelleke Pietronella Maria Brouwer、Ayse Selcen Oguz Erdogan、Niek Hugen、Femke Simmer、Iris Dionne Nagtegaal。资金获取:Gina Brown、Iris Dionne Nagtegaal。数据采集与分析Nelleke Pietronella Maria Brouwer、Ayse Selcen Oguz Erdogan、Shannon van Vliet、Natasja Rutgers。统计分析:Nelleke Pietronella Maria Brouwer、Ayse Selcen Oguz Erdogan、Shannon van Vliet、Natasja Rutgers、Femke Simmer。材料支持Nikki Knijn、Gesina van Lijnschoten、Jessica Juliana Tan、Gina Brown。写作-原稿:Nelleke Pietronella Maria Brouwer、Ayse Selcen Oguz Erdogan、Niek Hugen、Femke Simmer、Iris Dionne Nagtegaal。撰稿-审稿-编辑Nelleke Pietronella Maria Brouwer、Ayse Selcen Oguz Erdogan、Shannon van Vliet、Natasja Rutgers、Nikki Knijn、Gesina van Lijnschoten、Jessica Juliana Tan、Johannes Hendrik Willem de Wilt、Niek Hugen、Gina Brown、Femke Simmer、Iris Dionne Nagtegaal。本研究得到了荷兰癌症协会(KUN 2019-12640)的支持。本研究根据荷兰 "人体组织和医学研究联合会"(Federa, Human Tissue and Medical Research:本研究根据荷兰《联邦人类组织和医学研究:负责任使用行为准则(2011)》的规定进行,无需患者知情同意。本研究已获得拉德布鲁德大学伦理委员会(CMO)的批准(批准号2020-7172)。
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引用次数: 0
Concurrent chemoradiotherapyof different radiation doses and different irradiation fields for locally advanced thoracic esophageal squamous cell carcinoma: A randomized, multicenter, phase III clinical trial 针对局部晚期胸腔食管鳞状细胞癌的不同放射剂量和不同照射野的同期化放疗:一项随机、多中心、III 期临床试验。
IF 20.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-19 DOI: 10.1002/cac2.12601
Jian Zhang, Minghao Li, Kaixian Zhang, Anping Zheng, Guang Li, Wei Huang, Shaoshui Chen, Xiangming Chen, Xiaomin Li, Yanxing Sheng, Xinchen Sun, Liping Liu, Xiaowei Liu, Jie Li, Jun Wang, Hong Ge, Shucheng Ye, Qingsong Pang, Xianwen Zhang, Shengbin Dai, Richard Yu, Wendong Gu, Mingming Dai, Gaowa Siqin, Yunwei Han, Xiaolin Ge, Xin Yuan, Yongjing Yang, Haiwen Zhu, Juan Pu, Lihua Dong, Xiangdong Sun, Jundong Zhou, Weidong Mao, Fei Gao, Haiqun Lin, Heyi Gong, Tao Zhou, Zhenjiang Li, Hongsheng Li, Zhongtang Wang, Baosheng Li

Background

Concurrent chemoradiotherapy (CCRT) is the standard treatment for locally advanced esophageal squamous cell carcinoma (ESCC). However, the optimal radiotherapy regimen, particularly in terms of total dose and planned range of irradiation field, remains unclear. This phase III clinical trial aimed to compare the survival benefits between different radiation doses and different target fields.

Methods

This trial compared two aspects of radiation treatment, total dose and field, using a two-by-two factorial design. The high-dose (HD) group received 59.4 Gy radiation, and the standard-dose (SD) group received 50.4 Gy. The involved field irradiation (IFI) group and elective nodal irradiation (ENI) group adopted different irradiation ranges. The participants were assigned to one of the four groups (HD+ENI, HD+IFI, SD+ENI and SD+IFI). The primary endpoint was overall survival (OS), and the secondary endpoints included progression-free survival (PFS). The synergy indexwas used to measure the interaction effect between dose and field.

Results

The interaction analysis did not reveal significant synergistic effects between the dose and irradiation field. In comparison to the target field, patients in IFI or ENI showed similar OS (hazard ratio [HR] = 0.99, 95% CI: 0.80-1.23, p = 0.930) and PFS (HR = 1.02, 95% CI: 0.82–1.25). The HD treatment did not show significantly prolonged OS compared with SD (HR = 0.90, 95% CI: 0.72–1.11, p = 0.318), but it suggested improved PFS (25.2 months to 18.0 months). Among the four groups, the HD+IFI group presented the best survival, while the SD+IFI group had the worst prognosis. No significant difference in the occurrence of severe adverse events was found in dose or field comparisons.

Conclusions

IFI demonstrated similar treatment efficacy to ENI in CCRT of ESCC. The HD demonstrated improved PFS, but did not significantly improve OS. The dose escalation based on IFI (HD+IFI) showed better therapeutic efficacy than the current recommendation (SD+ENI) and is worth further validation.

背景:同期放化疗(CCRT)是局部晚期食管鳞状细胞癌(ESCC)的标准治疗方法。然而,最佳放疗方案,尤其是总剂量和计划照射野范围,仍不明确。这项III期临床试验旨在比较不同放射剂量和不同靶区对患者生存的益处:该试验采用二乘二的因子设计,比较了放射治疗的两个方面,即总剂量和照射野。高剂量(HD)组接受59.4 Gy的放射治疗,标准剂量(SD)组接受50.4 Gy的放射治疗。介入野照射(IFI)组和选择性结节照射(ENI)组采用不同的照射范围。参与者被分配到四组(HD+ENI组、HD+IFI组、SD+ENI组和SD+IFI组)中的一组。主要终点是总生存期(OS),次要终点包括无进展生存期(PFS)。协同作用指数用于衡量剂量和领域之间的交互作用:结果:交互作用分析并未显示剂量和照射野之间有明显的协同效应。与靶区相比,IFI 或 ENI 患者的 OS(危险比 [HR] = 0.99,95% CI:0.80-1.23,p = 0.930)和 PFS(HR = 1.02,95% CI:0.82-1.25)相似。与 SD 相比,HD 治疗并没有明显延长 OS(HR = 0.90,95% CI:0.72-1.11,p = 0.318),但却改善了 PFS(25.2 个月至 18.0 个月)。在四组患者中,HD+IFI 组的生存率最高,而 SD+IFI 组的预后最差。在剂量或病区比较中,严重不良事件的发生率无明显差异:结论:在ESCC的CCRT治疗中,IFI与ENI的疗效相似。结论:在 ESCC 的 CCRT 治疗中,IFI 的疗效与 ENI 相似,HD 改善了 PFS,但并未显著改善 OS。基于IFI的剂量升级(HD+IFI)比目前的推荐方案(SD+ENI)显示出更好的疗效,值得进一步验证。
{"title":"Concurrent chemoradiotherapyof different radiation doses and different irradiation fields for locally advanced thoracic esophageal squamous cell carcinoma: A randomized, multicenter, phase III clinical trial","authors":"Jian Zhang,&nbsp;Minghao Li,&nbsp;Kaixian Zhang,&nbsp;Anping Zheng,&nbsp;Guang Li,&nbsp;Wei Huang,&nbsp;Shaoshui Chen,&nbsp;Xiangming Chen,&nbsp;Xiaomin Li,&nbsp;Yanxing Sheng,&nbsp;Xinchen Sun,&nbsp;Liping Liu,&nbsp;Xiaowei Liu,&nbsp;Jie Li,&nbsp;Jun Wang,&nbsp;Hong Ge,&nbsp;Shucheng Ye,&nbsp;Qingsong Pang,&nbsp;Xianwen Zhang,&nbsp;Shengbin Dai,&nbsp;Richard Yu,&nbsp;Wendong Gu,&nbsp;Mingming Dai,&nbsp;Gaowa Siqin,&nbsp;Yunwei Han,&nbsp;Xiaolin Ge,&nbsp;Xin Yuan,&nbsp;Yongjing Yang,&nbsp;Haiwen Zhu,&nbsp;Juan Pu,&nbsp;Lihua Dong,&nbsp;Xiangdong Sun,&nbsp;Jundong Zhou,&nbsp;Weidong Mao,&nbsp;Fei Gao,&nbsp;Haiqun Lin,&nbsp;Heyi Gong,&nbsp;Tao Zhou,&nbsp;Zhenjiang Li,&nbsp;Hongsheng Li,&nbsp;Zhongtang Wang,&nbsp;Baosheng Li","doi":"10.1002/cac2.12601","DOIUrl":"10.1002/cac2.12601","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background</h3>\u0000 \u0000 <p>Concurrent chemoradiotherapy (CCRT) is the standard treatment for locally advanced esophageal squamous cell carcinoma (ESCC). However, the optimal radiotherapy regimen, particularly in terms of total dose and planned range of irradiation field, remains unclear. This phase III clinical trial aimed to compare the survival benefits between different radiation doses and different target fields.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>This trial compared two aspects of radiation treatment, total dose and field, using a two-by-two factorial design. The high-dose (HD) group received 59.4 Gy radiation, and the standard-dose (SD) group received 50.4 Gy. The involved field irradiation (IFI) group and elective nodal irradiation (ENI) group adopted different irradiation ranges. The participants were assigned to one of the four groups (HD+ENI, HD+IFI, SD+ENI and SD+IFI). The primary endpoint was overall survival (OS), and the secondary endpoints included progression-free survival (PFS). The synergy indexwas used to measure the interaction effect between dose and field.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>The interaction analysis did not reveal significant synergistic effects between the dose and irradiation field. In comparison to the target field, patients in IFI or ENI showed similar OS (hazard ratio [HR] = 0.99, 95% CI: 0.80-1.23, <i>p</i> = 0.930) and PFS (HR = 1.02, 95% CI: 0.82–1.25). The HD treatment did not show significantly prolonged OS compared with SD (HR = 0.90, 95% CI: 0.72–1.11, <i>p</i> = 0.318), but it suggested improved PFS (25.2 months to 18.0 months). Among the four groups, the HD+IFI group presented the best survival, while the SD+IFI group had the worst prognosis. No significant difference in the occurrence of severe adverse events was found in dose or field comparisons.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>IFI demonstrated similar treatment efficacy to ENI in CCRT of ESCC. The HD demonstrated improved PFS, but did not significantly improve OS. The dose escalation based on IFI (HD+IFI) showed better therapeutic efficacy than the current recommendation (SD+ENI) and is worth further validation.</p>\u0000 </section>\u0000 </div>","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":"44 10","pages":"1173-1188"},"PeriodicalIF":20.1,"publicationDate":"2024-08-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cac2.12601","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142003690","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
FGFR3 alterations in bladder cancer: Sensitivity and resistance to targeted therapies 膀胱癌中的 FGFR3 改变:靶向疗法的敏感性和耐药性。
IF 20.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-19 DOI: 10.1002/cac2.12602
Maxim Noeraparast, Katarina Krajina, Renate Pichler, Dora Niedersüß-Beke, Shahrokh F Shariat, Viktor Grünwald, Sascha Ahyai, Martin Pichler

In this review, we revisit the pivotal role of fibroblast growth factor receptor 3 (FGFR3) in bladder cancer (BLCA), underscoring its prevalence in both non-muscle-invasive and muscle-invasive forms of the disease. FGFR3 mutations in up to half of BLCAs play a well-established role in tumorigenesis, shaping distinct tumor initiation patterns and impacting the tumor microenvironment (TME). Emphasizing the importance of considering epithelial-mesenchymal transition profile and TME status, we revisit their relevance in predicting responses to immune checkpoint inhibitors in FGFR3-mutated BLCAs. This writing highlights the initially promising yet transient efficacy of the FGFR inhibitor Erdafitinib on FGFR3-mutated BLCA, stressing the pressing need to unravel resistance mechanisms and identify co-targets for future combinatorial studies. A thorough analysis of recent preclinical and clinical evidence reveals resistance mechanisms, including secondary mutations, epigenetic alterations in pathway effectors, phenotypic heterogeneity, and population-specific variations within FGFR3 mutational status. Lastly, we discuss the potential of combinatorial treatments and concepts like synthetic lethality for discovering more effective targeted therapies against FGFR3-mutated BLCA.

在这篇综述中,我们重新审视了成纤维细胞生长因子受体 3 (FGFR3) 在膀胱癌 (BLCA) 中的关键作用,强调了它在非肌肉浸润性和肌肉浸润性膀胱癌中的普遍性。多达半数的膀胱癌患者体内的 FGFR3 基因突变在肿瘤发生过程中发挥了公认的作用,形成了独特的肿瘤起始模式并影响了肿瘤微环境(TME)。我们强调了考虑上皮-间质转化特征和TME状态的重要性,并重新审视了它们在预测FGFR3突变BLCA对免疫检查点抑制剂的反应中的相关性。这篇文章强调了FGFR抑制剂Erdafitinib对FGFR3突变的BLCA最初具有良好但短暂的疗效,强调了揭示耐药机制并为未来的联合研究确定共同靶点的迫切需要。对近期临床前和临床证据的深入分析揭示了耐药机制,包括继发性突变、通路效应因子的表观遗传学改变、表型异质性以及 FGFR3 突变状态下的人群特异性变化。最后,我们讨论了组合疗法和合成致死等概念的潜力,以发现针对 FGFR3 突变的 BLCA 的更有效的靶向疗法。
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引用次数: 0
4-1BB transcriptomic expression patterns across malignancies: Implications for clinical trials of 4-1BB agonists 不同恶性肿瘤的 4-1BB 转录组表达模式:4-1BB 激动剂临床试验的意义。
IF 20.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-08-04 DOI: 10.1002/cac2.12592
Yuji Uehara, Shumei Kato, Daisuke Nishizaki, Hirotaka Miyashita, Suzanna Lee, Mary K. Nesline, Sarabjot Pabla, Jeffrey M. Conroy, Paul DePietro, Heidi Ko, Jason K. Sicklick, Razelle Kurzrock
<p>4-1BB, a member of the tumor necrosis factor receptor superfamily, is an important co-stimulatory molecule regulating the activity of immune cells across a range of physiological and pathological processes, which culminates in a potent immune response (Figure 1A and B) [<span>1, 2</span>]. Numerous clinical trials have been conducted utilizing 4–1BB agonists (Supplemental Table S1); however, previous and ongoing 4-1BB agonist trials are being conducted without biomarker selection, which potentially explains their modest efficacy. Interestingly, several studies suggest the potential value of utilizing transcriptomics in addition to genomics to identify the unique immunologic signature of individual tumors [<span>3-7</span>].</p><p>Herein, we explore the landscape of 4–1BB transcriptomic profiles in 514 patients, including 489 with advanced/metastatic cancers and clinical annotation, and we discuss the potential therapeutic implications of the observed patterns and heterogeneity. The study methods are provided in the Supplementary File.</p><p>There were 514 tumors reflecting 31 different cancer types evaluated (Supplemental Table S2). Their median age was 61 (range, 24-93) years; 310 (60.3%) were women. The most frequent tumor types assessed were colorectal cancer (<i>n</i> = 140 samples). Of the 514 patients, 489 had confirmed metastatic or locally advanced disease, but the dates of metastatic disease for 25 patients were not documented. Overall, 489 patients with advanced/metastatic disease had fully evaluable clinical correlative data (Figure 1C). In total, 217 patients received ICIs; 199 received anti-programmed cell death 1 (PD-1)/ programmed death-ligand 1 (PD-L1) monotherapy, 2 received anti-cytotoxic T-lymphocyte-associated protein 4 (CTLA-4) monotherapy, and 16 received a combination of anti-PD-1/PD-L1 and anti-CTLA-4. The remaining 272 patients never received immunotherapy.</p><p>Figure 1D demonstrates the variations in 4-1BB RNA expression across different cancer types: 4-1BB ribonucleic acid (RNA) expression was classified as “high” (75-100th percentile), “moderate” (25-74th percentile), and “low” (0-24th percentile). Among all cancers (<i>n</i> = 514), 77 (15.0%) had high, 268 (52.1%) had moderate, and 169 (32.9%) had low 4-1BB expression. Small intestine and ovarian cancers most frequently had high 4-1BB RNA expression (25.0% and 20.9% of tumors, respectively).</p><p>To identify the patient population who might theoretically benefit the most from 4-1BB agonism, the proportion of patients having high 4-1BB expression along with low/moderate 4-1BB ligand (4-1BBL) expression was assessed in malignancies that had more than 20 representative samples (from a biologic point of view, high receptor with low/moderate ligand might be most amenable to treatment with 4-1BB agonists in the clinic). Malignancies with the highest proportion of patients having both high 4-1BB expression and low/moderate 4-1BBL expression were ovarian and pancreatic
4-1BB是肿瘤坏死因子受体超家族的成员之一,它是一种重要的协同刺激分子,能调节免疫细胞在一系列生理和病理过程中的活性,最终产生强有力的免疫反应(图1A和B)[1, 2]。利用 4-1BB 激动剂进行的临床试验不胜枚举(补充表 S1);然而,以往和正在进行的 4-1BB 激动剂试验都是在未选择生物标记物的情况下进行的,这可能是其疗效一般的原因。有趣的是,一些研究表明,除了基因组学外,利用转录组学来识别个体肿瘤的独特免疫学特征也具有潜在价值[3-7]。在此,我们探讨了 514 例患者(包括 489 例晚期/转移性癌症患者和临床注释患者)的 4-1BB 转录组特征,并讨论了所观察到的模式和异质性的潜在治疗意义。研究方法见补充文件。514例肿瘤反映了31种不同的癌症类型(补充表S2)。中位年龄为 61 岁(24-93 岁不等),女性 310 人(60.3%)。最常评估的肿瘤类型是结直肠癌(n = 140 个样本)。在 514 名患者中,489 人已确诊为转移性或局部晚期疾病,但 25 名患者的转移性疾病发生日期没有记录。总体而言,489 名晚期/转移性疾病患者拥有完全可评估的临床相关数据(图 1C)。共有 217 名患者接受了 ICIs;其中 199 人接受了抗程序性细胞死亡 1(PD-1)/程序性死亡配体 1(PD-L1)单药治疗,2 人接受了抗细胞毒性 T 淋巴细胞相关蛋白 4(CTLA-4)单药治疗,16 人接受了抗 PD-1/PD-L1 和抗 CTLA-4 联合治疗。图1D显示了不同癌症类型中4-1BB RNA表达的变化:4-1BB核糖核酸(RNA)表达分为 "高"(75-100百分位数)、"中"(25-74百分位数)和 "低"(0-24百分位数)。在所有癌症(n = 514)中,77 例(15.0%)4-1BB 高表达,268 例(52.1%)中度表达,169 例(32.9%)低表达。小肠癌和卵巢癌最常出现 4-1BB RNA 高表达(分别占肿瘤的 25.0% 和 20.9%)。为了确定理论上可能从4-1BB激动剂中获益最多的患者人群,我们在有20个以上代表性样本的恶性肿瘤中评估了4-1BB高表达同时4-1BB配体(4-1BBL)低/中表达的患者比例(从生物学角度来看,高受体低/中配体可能最适合在临床上使用4-1BB激动剂治疗)。4-1BB高表达和4-1BBL低/中表达患者比例最高的恶性肿瘤是卵巢癌和胰腺癌,分别为18.6%(8/43)和14.5%(8/55),这两种恶性肿瘤中只有&gt;15%的患者具有这种表达特征(图1E)。此外,4-1BB高表达同时4-1BBL低/中度表达的患者比例分别为:肉瘤12.5%(3/24)、子宫癌12.5%(3/24)、肺癌10.0%(2/20)、胃癌8.0%(2/25)、结直肠癌7.9%(11/140)、乳腺癌0%(0/49)。肿瘤类型内部和之间的表达模式存在差异。我们研究了产生与 TNF 受体超家族相关的免疫调节分子或相互作用的共刺激分子的 12 个基因,以及与临床 ICIs 相关的标记物(补充表 S3)。单变量和随后的多变量逻辑回归结果见图 1F。4-1BB的高RNA表达与任何特定肿瘤类型无关。在免疫标记物中,4-1BB RNA高表达与PD-L2(几率比[OR]3.1,95%置信区间[CI]1.56-6.47,P = 0.018)、ICOS(OR 4.5,95% CI 2.03-10.36,P = 0.003)和CD27(OR 2.2,95% CI 1.12-4.81,P = 0.046)显著相关(均为多变量)。在分析来自 ICGC 和 TCGA 的泛癌症全基因组队列(n = 2,658)时,在 33,855 个基因中,ICOS RNA 表达与 4-1BB 表达的相关性最为显著(矛曼相关系数 (r):0.77, P &lt; 0.001; 图 1G)。虽然在我们的队列中,4-1BB 的高 RNA 表达与 PD-1/PD-L1 的高表达无关(图 1F),但如果将 4-1BB 的 RNA 表达作为线性变量进行研究,则其与 PD-1 的表达显著相关(spearman 相关系数:0.70,P &lt; 0.001;补充图 S1)。此外,PD-L2 和 CD27 的表达也与 4-1BB 的表达显著相关(矛人相关系数:0.69,P &lt;0.001;0.53,P &lt;0.001)。
{"title":"4-1BB transcriptomic expression patterns across malignancies: Implications for clinical trials of 4-1BB agonists","authors":"Yuji Uehara,&nbsp;Shumei Kato,&nbsp;Daisuke Nishizaki,&nbsp;Hirotaka Miyashita,&nbsp;Suzanna Lee,&nbsp;Mary K. Nesline,&nbsp;Sarabjot Pabla,&nbsp;Jeffrey M. Conroy,&nbsp;Paul DePietro,&nbsp;Heidi Ko,&nbsp;Jason K. Sicklick,&nbsp;Razelle Kurzrock","doi":"10.1002/cac2.12592","DOIUrl":"10.1002/cac2.12592","url":null,"abstract":"&lt;p&gt;4-1BB, a member of the tumor necrosis factor receptor superfamily, is an important co-stimulatory molecule regulating the activity of immune cells across a range of physiological and pathological processes, which culminates in a potent immune response (Figure 1A and B) [&lt;span&gt;1, 2&lt;/span&gt;]. Numerous clinical trials have been conducted utilizing 4–1BB agonists (Supplemental Table S1); however, previous and ongoing 4-1BB agonist trials are being conducted without biomarker selection, which potentially explains their modest efficacy. Interestingly, several studies suggest the potential value of utilizing transcriptomics in addition to genomics to identify the unique immunologic signature of individual tumors [&lt;span&gt;3-7&lt;/span&gt;].&lt;/p&gt;&lt;p&gt;Herein, we explore the landscape of 4–1BB transcriptomic profiles in 514 patients, including 489 with advanced/metastatic cancers and clinical annotation, and we discuss the potential therapeutic implications of the observed patterns and heterogeneity. The study methods are provided in the Supplementary File.&lt;/p&gt;&lt;p&gt;There were 514 tumors reflecting 31 different cancer types evaluated (Supplemental Table S2). Their median age was 61 (range, 24-93) years; 310 (60.3%) were women. The most frequent tumor types assessed were colorectal cancer (&lt;i&gt;n&lt;/i&gt; = 140 samples). Of the 514 patients, 489 had confirmed metastatic or locally advanced disease, but the dates of metastatic disease for 25 patients were not documented. Overall, 489 patients with advanced/metastatic disease had fully evaluable clinical correlative data (Figure 1C). In total, 217 patients received ICIs; 199 received anti-programmed cell death 1 (PD-1)/ programmed death-ligand 1 (PD-L1) monotherapy, 2 received anti-cytotoxic T-lymphocyte-associated protein 4 (CTLA-4) monotherapy, and 16 received a combination of anti-PD-1/PD-L1 and anti-CTLA-4. The remaining 272 patients never received immunotherapy.&lt;/p&gt;&lt;p&gt;Figure 1D demonstrates the variations in 4-1BB RNA expression across different cancer types: 4-1BB ribonucleic acid (RNA) expression was classified as “high” (75-100th percentile), “moderate” (25-74th percentile), and “low” (0-24th percentile). Among all cancers (&lt;i&gt;n&lt;/i&gt; = 514), 77 (15.0%) had high, 268 (52.1%) had moderate, and 169 (32.9%) had low 4-1BB expression. Small intestine and ovarian cancers most frequently had high 4-1BB RNA expression (25.0% and 20.9% of tumors, respectively).&lt;/p&gt;&lt;p&gt;To identify the patient population who might theoretically benefit the most from 4-1BB agonism, the proportion of patients having high 4-1BB expression along with low/moderate 4-1BB ligand (4-1BBL) expression was assessed in malignancies that had more than 20 representative samples (from a biologic point of view, high receptor with low/moderate ligand might be most amenable to treatment with 4-1BB agonists in the clinic). Malignancies with the highest proportion of patients having both high 4-1BB expression and low/moderate 4-1BBL expression were ovarian and pancreatic","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":"44 10","pages":"1168-1172"},"PeriodicalIF":20.1,"publicationDate":"2024-08-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cac2.12592","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141888502","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Cancer Communications
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