首页 > 最新文献

Cancer Communications最新文献

英文 中文
Deciphering metastatic route-specific signals and their microenvironment interactions in peritoneal metastasis of gastric cancer 解密胃癌腹膜转移的转移途径特异性信号及其微环境相互作用
IF 16.2 1区 医学 Q1 Medicine Pub Date : 2024-03-18 DOI: 10.1002/cac2.12533
Ki Tae Kim, Jae Eun Lee, Jae-Ho Cheong, In Cho, Yoon Young Choi

Gastric cancer (GC) is a pervasive global malignancy with high mortality rates due to distant metastasis [1]. GC metastasis can occur via hematogenous route, peritoneal route, and specifically through ovarian spread in females [2]. Among these, peritoneal metastasis is the most prevalent and challenging condition to treat [3]. The Cancer Genome Atlas (TCGA) has uncovered four molecular subtypes of GC: microsatellite instability, Epstein-Barr virus-related, chromosomal instability, and genomically stable [4]. These subtypes exhibit unique features and metastatic behaviors [5], providing valuable insights into the molecular characteristics of GC. Nevertheless, there remains a gap in understanding gene expression feature in metastatic GC compared to corresponding primary tumors, particularly regarding its biological and clinical relevance in different metastatic patterns.

A whole-transcriptome sequencing analysis was conducted to investigate the characteristics of metastatic GC. We examined 66 paired primary and metastatic tumors, categorized according to their sites (38 primary, 9 hematogenous, 6 peritoneal, and 13 ovarian metastases), collected from 14 patients with GC metastasis (Supplementary Tables S1-S2 and Supplementary Figure S1). To corroborate the biological and clinical relevance of the identified metastatic GC-specific signals, we utilized publicly available databases containing expression data on primary GC, including TCGA (n = 415) [4], Asian Cancer Research Group (ACRG, n = 300) [6], and Yonsei Cancer Center (YCC, n = 433) cohorts [7]. For in-depth analysis at the single-cell resolution, we accessed a public dataset comprising 5 primary GC samples [8] and performed a single-cell RNA sequencing (scRNA-seq) analysis on ascites obtained from 4 patients with GC (Supplementary Tables S3-S4). The flow of analysis is summarized in Supplementary Figure S2. Details of the patient demographics, samples, and data analysis methods used are outlined in the Supplementary Methods.

Through a differential expression analysis of the 66 paired primary and metastatic tumors, we identified 949 genes uniquely associated with metastatic GC tumors (Supplementary Figure S3). Subsequent over-representation analysis of these metastatic GC-specific genes indicated that hematogenous metastatic tumors exhibited an up-regulation of receptor tyrosine kinase-related signals, while simultaneously showing a down-regulation of pathways associated with epithelial-mesenchymal transition (EMT) (Supplementary Figure S4). Conversely, peritoneal/ovarian metastatic tumors demonstrated an upregulation of the Hedgehog pathway, a key player in EMT signaling. These findings suggest that the mechanisms underlying GC metastasis vary by route [5], thus underscoring the need for route-specific clinical considerations.

胃癌(GC)是一种普遍存在的全球性恶性肿瘤,其远处转移导致的死亡率很高[1]。胃癌转移可通过血源性途径、腹膜途径,特别是通过女性卵巢转移[2]。其中,腹膜转移最为常见,治疗起来也最具挑战性[3]。癌症基因组图谱(TCGA)发现了 GC 的四种分子亚型:微卫星不稳定型、Epstein-Barr 病毒相关型、染色体不稳定型和基因组稳定型 [4]。这些亚型表现出独特的特征和转移行为[5],为了解 GC 的分子特征提供了宝贵的信息。然而,与相应的原发肿瘤相比,人们对转移性 GC 基因表达特征的了解仍然存在差距,尤其是在不同转移模式下的生物学和临床相关性方面。我们研究了从 14 例 GC 转移患者中收集的 66 例配对原发和转移肿瘤,并根据其部位进行了分类(38 例原发、9 例血行转移、6 例腹膜转移和 13 例卵巢转移)(补充表 S1-S2 和补充图 S1)。为了证实所发现的转移性 GC 特异性信号的生物学和临床相关性,我们利用了包含原发性 GC 表达数据的公开数据库,包括 TCGA(n = 415)[4]、亚洲癌症研究组(ACRG,n = 300)[6]和延世癌症中心(YCC,n = 433)队列[7]。为了在单细胞分辨率上进行深入分析,我们访问了由 5 个原发性 GC 样本组成的公开数据集[8],并对 4 名 GC 患者的腹水进行了单细胞 RNA 测序(scRNA-seq)分析(补充表 S3-S4)。分析流程见补充图 S2。通过对 66 个配对的原发性和转移性肿瘤进行差异表达分析,我们确定了 949 个与转移性 GC 肿瘤独特相关的基因(补充图 S3)。随后对这些转移性 GC 特异性基因的过度表达分析表明,血源性转移性肿瘤表现出受体酪氨酸激酶相关信号的上调,同时表现出上皮-间质转化(EMT)相关通路的下调(补充图 S4)。相反,腹膜/卵巢转移性肿瘤则表现出刺猬(Hedgehog)通路的上调,而刺猬通路是 EMT 信号转导的关键参与者。这些研究结果表明,GC 转移的机制因途径而异[5],因此强调了临床上需要考虑特定途径。非负因式分解(NMF)算法根据GC特异性基因的表达将TCGA队列分为两个亚型,分别称为NMF-G1和NMF-G2。NMF-G2 亚型的特点是 GC 特异性基因表达上调,与基因组稳定亚型相关。该亚型经常出现粘连蛋白 1(CDH1)的体细胞突变,而且无论哪种分子亚型,其预后都较差(补充图 S5)。通过加权基因共表达网络分析,我们发现了一个由 122 个基因组成的模块,这些基因在 NMF-G1 和 NMF-G2 之间具有不同的表达模式。值得注意的是,这些基因表现出 EMT 相关信号的上调,因此被称为转移特异性 EMT(msEMT)基因(附图 S6)。这些 msEMT 基因是独特的,因为它们不同于 GC 生物学中的既定基因集和共识癌症驱动基因 [6,9]。此外,大多数 msEMT 基因在血行转移中表现出下调。为了验证msEMT基因在GC中的临床意义,我们分析了ACRG[6]和YCC[7]两个独立的原发性GC队列中这些基因的表达水平,这两个队列都有复发数据。通过对 msEMT 基因表达谱的评估,我们将每个队列分为两个不同的亚型,其中高表达组被指定为 msEMT 亚型。重要的是,在两个队列中,即使调整了临床因素,msEMT 亚型也与明显较差的预后相关(补充图 S7A-D)。此外,原发性肿瘤中的 msEMT 亚型与腹膜/卵巢复发的关系更为密切。机器学习分析表明,msEMT 基因对腹膜/卵巢转移有很强的预测能力,准确率很高(>0.
{"title":"Deciphering metastatic route-specific signals and their microenvironment interactions in peritoneal metastasis of gastric cancer","authors":"Ki Tae Kim, Jae Eun Lee, Jae-Ho Cheong, In Cho, Yoon Young Choi","doi":"10.1002/cac2.12533","DOIUrl":"https://doi.org/10.1002/cac2.12533","url":null,"abstract":"<p>Gastric cancer (GC) is a pervasive global malignancy with high mortality rates due to distant metastasis [<span>1</span>]. GC metastasis can occur via hematogenous route, peritoneal route, and specifically through ovarian spread in females [<span>2</span>]. Among these, peritoneal metastasis is the most prevalent and challenging condition to treat [<span>3</span>]. The Cancer Genome Atlas (TCGA) has uncovered four molecular subtypes of GC: microsatellite instability, Epstein-Barr virus-related, chromosomal instability, and genomically stable [<span>4</span>]. These subtypes exhibit unique features and metastatic behaviors [<span>5</span>], providing valuable insights into the molecular characteristics of GC. Nevertheless, there remains a gap in understanding gene expression feature in metastatic GC compared to corresponding primary tumors, particularly regarding its biological and clinical relevance in different metastatic patterns.</p>\u0000<p>A whole-transcriptome sequencing analysis was conducted to investigate the characteristics of metastatic GC. We examined 66 paired primary and metastatic tumors, categorized according to their sites (38 primary, 9 hematogenous, 6 peritoneal, and 13 ovarian metastases), collected from 14 patients with GC metastasis (Supplementary Tables S1-S2 and Supplementary Figure S1). To corroborate the biological and clinical relevance of the identified metastatic GC-specific signals, we utilized publicly available databases containing expression data on primary GC, including TCGA (<i>n</i> = 415) [<span>4</span>], Asian Cancer Research Group (ACRG, <i>n</i> = 300) [<span>6</span>], and Yonsei Cancer Center (YCC, <i>n</i> = 433) cohorts [<span>7</span>]. For in-depth analysis at the single-cell resolution, we accessed a public dataset comprising 5 primary GC samples [<span>8</span>] and performed a single-cell RNA sequencing (scRNA-seq) analysis on ascites obtained from 4 patients with GC (Supplementary Tables S3-S4). The flow of analysis is summarized in Supplementary Figure S2. Details of the patient demographics, samples, and data analysis methods used are outlined in the Supplementary Methods.</p>\u0000<p>Through a differential expression analysis of the 66 paired primary and metastatic tumors, we identified 949 genes uniquely associated with metastatic GC tumors (Supplementary Figure S3). Subsequent over-representation analysis of these metastatic GC-specific genes indicated that hematogenous metastatic tumors exhibited an up-regulation of receptor tyrosine kinase-related signals, while simultaneously showing a down-regulation of pathways associated with epithelial-mesenchymal transition (EMT) (Supplementary Figure S4). Conversely, peritoneal/ovarian metastatic tumors demonstrated an upregulation of the Hedgehog pathway, a key player in EMT signaling. These findings suggest that the mechanisms underlying GC metastasis vary by route [<span>5</span>], thus underscoring the need for route-specific clinical considerations.</","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":null,"pages":null},"PeriodicalIF":16.2,"publicationDate":"2024-03-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140148000","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Impact of pre-existing cardiometabolic diseases on metastatic cancer stage at diagnosis: a prospective multinational cohort study 原有心脏代谢疾病对诊断时转移性癌症分期的影响:一项前瞻性多国队列研究。
IF 16.2 1区 医学 Q1 Medicine Pub Date : 2024-03-15 DOI: 10.1002/cac2.12526
Anna Jansana, Aviane Auguste, Marina Kvaskoff, Agnès Fournier, Emma Fontvieille, Laia Peruchet-Noray, Carine Biessy, Reynalda Cordova, Kristina Elin Nielsen Petersen, Anne Tjønneland, Verena Katzke, Rudolf Kaaks, Fulvio Ricceri, Salvatore Panico, Paolo Contiero, Maria-Jose Sánchez, Jesus Castilla, Marta Crous-Bou, Alicia Heath, Elom Kouassivi Aglago, Elisabete Weiderpass, Marc James Gunter, Pietro Ferrari, Elio Riboli, Vivian Viallon, Heinz Freisling

Owing to shared risk factors between cardiometabolic diseases (CMDs) and cancer, coupled with population aging, the lifetime risk of an individual developing cancer after a CMD is increasing. Furthermore, biological mechanisms such as insulin resistance or inflammation may not only predispose individuals with CMD to an elevated risk of certain types of cancer but also to a diagnosis of cancer at an advanced stage [1, 2].

Cancer stage at diagnosis strongly correlates with cancer survival rates and impacts treatment decisions. Early cancer detection is key to improving cancer outcomes, especially for cancers with poor prognosis. Factors associated with a higher risk of an advanced-stage diagnosis may differ from those associated with cancer incidence. Previous studies support an association between advanced-stage cancer at diagnosis and certain patient characteristics, such as higher body mass index (BMI), older age, smoking, comorbidities, and cancer type. Studies examining the influence of comorbidities on cancer stage at diagnosis have suggested that a CMD requiring regular medical follow-up is associated with earlier cancer detection [3, 4]. However, studies have also suggested that overall participation rates in cancer screening programs may be lower among individuals with type 2 diabetes (T2D) or cardiovascular diseases (CVD), which may lead to later cancer detection and a more advanced stage at diagnosis [5].

A better understanding of how CMDs prior to cancer are associated with stage at cancer diagnosis may inform cancer screening recommendations. This study aimed to investigate whether having a pre-existing CMD is associated with late-stage cancer diagnosis and to identify potential modifiers of this association in the European Prospective Investigation into Cancer and Nutrition study (EPIC).

This multinational prospective cohort study included 11,945 individuals diagnosed with first primary cancer between 1992 and 2012. Of all the diagnosed cancers, 64.9% were localized, 35.1% were metastatic, 53.6% were diagnosed in women, and 4.8%, a, 7.1%, and 1.3% had a history of CVD, of T2D, and of both CVD and T2D, respectively (Supplementary Figure S1, Supplementary Table S1). In addition to overall cancer, breast and colorectal cancers (38.1% of all cancers) were also investigated separately because of the well-established population-based cancer screening programs for these two cancers at the time of cancer diagnosis in the countries included in this study (i.e., Denmark, Germany, Italy, Spain, Sweden, and the UK). Detailed methods are described in Supplementary Materials.

We found that the adjusted odds ratios (ORs) of developing metastatic cancer (vs. localized) comparing individuals with pre-existing CVD, T2D or both to those without a CMD prior to cancer were 0.92 (95% confidence interval [CI] = 0.65-1.01), 1.04 (95% CI = 0.83-1.18) and 1.06 (95% CI = 0.60-1.36), respectively

首先,T2D与晚期诊断之间的正相关仅限于人群筛查计划未涵盖的癌症。此外,在不对癌症类型进行调整的情况下,这种关联变得更强,这一观察结果表明,患有 T2D 的成年人患上更常在转移阶段确诊的癌症的风险更高。与此相反,心血管疾病与晚期诊断之间的提示性反向关联仅限于进行全民筛查的癌症(即我们研究中的乳腺癌和结直肠癌)。其次,有证据表明,年龄组和吸烟状况会改变这些关联的效应。慢性疾病可能会干扰癌症及时诊断的机制包括竞争性需求,即具有高护理复杂性的慢性疾病可能会因症状被掩盖或未被发现而延误癌症诊断。也有观点认为,频繁就医的患者可能不愿意接受医疗专业人员的额外诊断检测。最后,影响癌症进展的生物机制,如高胰岛素血症、炎症途径或共同风险因素,可能解释了 CMD 与晚期癌症诊断之间的关系[1, 8]。与此相反,促进癌症及时诊断的机制包括:更频繁地接触医疗服务,从而提供监测机会以讨论可能的癌症症状;其次,一些慢性疾病的治疗方法可降低进展为转移性疾病的风险(如阿司匹林与结直肠癌)[1,9]。然而,新诊断出的 T2D 或高胰岛素血症患者已被推荐进行胰腺癌和肝癌筛查,因为原有疾病的存在可能会掩盖其他疾病,从而导致癌症晚期发病[10]。我们的研究结果支持这些筛查建议。对于其他部位的癌症,如呼吸系统癌症或血液系统癌症,研究并未显示原有 CMD 对诊断时癌症分期的影响[7]。此外,我们还获得了有关各种饮食和生活方式变量的数据,因此能够对混杂因素进行全面调整。我们研究的局限性包括缺乏心血管疾病/T2D管理数据、缺乏对混杂因素(如生活方式因素)的重复评估,以及样本量有限,无法对不太常见的癌症进行分析(补充表S3)。除了意大利和西班牙的一些研究中心(献血者)、乌得勒支和佛罗伦萨的一些研究中心(受邀参加当地人群乳腺癌筛查项目的妇女)以及牛津的一些研究中心(半数受试者不吃肉)外,大多数研究中心的受试者都来自普通成年人。在这项前瞻性多国队列研究中,患有心血管疾病、糖尿病或同时患有这两种疾病的癌症患者被确诊为晚期癌症的可能性总体上并不大。在这项前瞻性多国队列研究中,患有心血管疾病的癌症患者或同时患有心血管疾病的癌症患者被确诊为晚期癌症的几率总体上并不高。还需要进一步的研究来证实,在未纳入人群筛查的癌症患者中,T2D与无心血管疾病和晚期癌症之间存在提示性的正相关:海因茨-弗雷斯林(Heinz Freisling)。分析数据:Anna Jansana.支持数据分析:Carine Biessy、Vivian Viallon。撰写手稿Anna Jansana、Heinz Freisling。对手稿的最终内容负主要责任:Heinz Freisling。严格审阅手稿的重要思想内容并批准最终版本:Anna Jansana、Aviane Auguste、Marina Kvaskoff、Carine Biessy、Agnès Fournier、Emma Fontvieille、Laia Peruchet-Noray、Reynalda Cordova、Kristina Elin Nielsen Petersen、Anne Tjønneland、Verena Katzke、Rudolf Kaaks、Fulvio Riccieri、Salvatore Panico、Paolo Contiero、Maria-Jose Sánchez、Jesus Castilla、Marta Crous-Bou、Alicia Heath、Elom Kouassivi Aglago、Elisabete Weiderpass、Marc James Gunter、Pietro Ferrari、Elio Riboli、Vivian Viallon、Heinz Freisling。本研究由法国国家癌症研究所(INCA_N°2018-123)资助,并得到法兰西岛癌症协会(N°2018-1-PL SHS-06-CIRC-1)的支持。EPIC的协调工作得到了国际癌症研究机构(IARC)和伦敦帝国学院公共卫生学院流行病学与生物统计学系的资助,该系还得到了NIHR帝国生物医学研究中心(BRC)提供的基础设施支持。
{"title":"Impact of pre-existing cardiometabolic diseases on metastatic cancer stage at diagnosis: a prospective multinational cohort study","authors":"Anna Jansana,&nbsp;Aviane Auguste,&nbsp;Marina Kvaskoff,&nbsp;Agnès Fournier,&nbsp;Emma Fontvieille,&nbsp;Laia Peruchet-Noray,&nbsp;Carine Biessy,&nbsp;Reynalda Cordova,&nbsp;Kristina Elin Nielsen Petersen,&nbsp;Anne Tjønneland,&nbsp;Verena Katzke,&nbsp;Rudolf Kaaks,&nbsp;Fulvio Ricceri,&nbsp;Salvatore Panico,&nbsp;Paolo Contiero,&nbsp;Maria-Jose Sánchez,&nbsp;Jesus Castilla,&nbsp;Marta Crous-Bou,&nbsp;Alicia Heath,&nbsp;Elom Kouassivi Aglago,&nbsp;Elisabete Weiderpass,&nbsp;Marc James Gunter,&nbsp;Pietro Ferrari,&nbsp;Elio Riboli,&nbsp;Vivian Viallon,&nbsp;Heinz Freisling","doi":"10.1002/cac2.12526","DOIUrl":"10.1002/cac2.12526","url":null,"abstract":"<p>Owing to shared risk factors between cardiometabolic diseases (CMDs) and cancer, coupled with population aging, the lifetime risk of an individual developing cancer after a CMD is increasing. Furthermore, biological mechanisms such as insulin resistance or inflammation may not only predispose individuals with CMD to an elevated risk of certain types of cancer but also to a diagnosis of cancer at an advanced stage [<span>1, 2</span>].</p><p>Cancer stage at diagnosis strongly correlates with cancer survival rates and impacts treatment decisions. Early cancer detection is key to improving cancer outcomes, especially for cancers with poor prognosis. Factors associated with a higher risk of an advanced-stage diagnosis may differ from those associated with cancer incidence. Previous studies support an association between advanced-stage cancer at diagnosis and certain patient characteristics, such as higher body mass index (BMI), older age, smoking, comorbidities, and cancer type. Studies examining the influence of comorbidities on cancer stage at diagnosis have suggested that a CMD requiring regular medical follow-up is associated with earlier cancer detection [<span>3, 4</span>]. However, studies have also suggested that overall participation rates in cancer screening programs may be lower among individuals with type 2 diabetes (T2D) or cardiovascular diseases (CVD), which may lead to later cancer detection and a more advanced stage at diagnosis [<span>5</span>].</p><p>A better understanding of how CMDs prior to cancer are associated with stage at cancer diagnosis may inform cancer screening recommendations. This study aimed to investigate whether having a pre-existing CMD is associated with late-stage cancer diagnosis and to identify potential modifiers of this association in the European Prospective Investigation into Cancer and Nutrition study (EPIC).</p><p>This multinational prospective cohort study included 11,945 individuals diagnosed with first primary cancer between 1992 and 2012. Of all the diagnosed cancers, 64.9% were localized, 35.1% were metastatic, 53.6% were diagnosed in women, and 4.8%, a, 7.1%, and 1.3% had a history of CVD, of T2D, and of both CVD and T2D, respectively (Supplementary Figure S1, Supplementary Table S1). In addition to overall cancer, breast and colorectal cancers (38.1% of all cancers) were also investigated separately because of the well-established population-based cancer screening programs for these two cancers at the time of cancer diagnosis in the countries included in this study (i.e., Denmark, Germany, Italy, Spain, Sweden, and the UK). Detailed methods are described in Supplementary Materials.</p><p>We found that the adjusted odds ratios (ORs) of developing metastatic cancer (vs. localized) comparing individuals with pre-existing CVD, T2D or both to those without a CMD prior to cancer were 0.92 (95% confidence interval [CI] = 0.65-1.01), 1.04 (95% CI = 0.83-1.18) and 1.06 (95% CI = 0.60-1.36), respectively ","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":null,"pages":null},"PeriodicalIF":16.2,"publicationDate":"2024-03-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cac2.12526","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140130795","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The mechanism of resistance to CDK4/6 inhibition and novel combination therapy with RNR inhibition for chemo-resistant bladder cancer CDK4/6 抑制剂的耐药机制以及与 RNR 抑制剂联合治疗化疗耐药膀胱癌的新方法。
IF 20.1 1区 医学 Q1 ONCOLOGY Pub Date : 2024-03-11 DOI: 10.1002/cac2.12532
Zhichao Tong, Yubo Zhao, Shiyu Bai, Benedikt Ebner, Lou Lienhard, Yuling Zhao, Ziqi Wang, Qi Pan, Pengyu Guo, Thilo Bracht, Barbara Sitek, Jürgen E. Gschwend, Wanhai Xu, Roman Nawroth

Bladder cancer (BCa) is the most prevalent urological cancer worldwide [1]. A significant proportion of BCa (89%) exhibits molecular alterations in the cell cycle pathway, and targeting cyclin-dependent kinases 4 and 6 (CDK4/6) is deemed as a promising therapeutic strategy [2]. Selective inhibitors of CDK4/6 (CDK4/6is) have been approved by the US Food and Drug Administration (FDA) [3]. They could induce cell cycle arrest in BCa immediately, and after this “sensitive stage”, unknown compensatory mechanism may cause acquired resistance [4, 5]. To address this issue, our study employed multi-omics and identified ribonucleotide reductase regulatory subunit M2 (RRM2), a crucial component of the ribonucleotide reductase (RNR) complex [6], as a key mediator in conferring acquired resistance. We further investigated whether Palbociclib activates proteolysis of RRM2 by the ubiquitin-proteasome system (UPS) and the ubiquitin-like proteins (UBLs) during the sensitive stage. Additionally, we explored whether RRM2 is controlled by E2F transcription factor 3 (E2F3) when acquired resistance is established. Interestingly, upregulation of RRM2 may also cause chemotherapy resistance [7]. Thus, we verified if concurrent inhibition of RNR and CDK4/6 holds promise as a novel therapeutic strategy for BCa patients, especially those exhibit resistance to chemotherapy. All the study designs and methods are described in the Supplementary file.

Retinoblastoma (RB)-positive BCa elicits a sequential progression from sensitivity to resistance to Palbociclib [8]. We utilized multi-omics to identify key regulators of this process (Figure 1A, Supplementary Tables S1-S5). The only candidate matching all three high-throughput screening approaches was RRM2, and pathway analysis further demonstrated related mechanisms (Supplementary Figures S1-S2). To validate this finding, we examined the cell cycle distribution and expression levels of the other RNR subunit RRM1 and RRM2 in a time kinetic (Figure 1B-C, Supplementary Figure S3A-D). Transcript levels were initially downregulated, followed by a partial recovery, while the decline and recovery pattern of proteins mirrored this. We then transduced single-guide RNAs of RRM1 and RRM2 into T24 synergistic activation mediator (SAM) cells and confirmed partial resistance (Figure 1D-E, Supplementary Figure S3E). However, degradation of RRM2 was still observed at early time points (Supplementary Figure S3F), indicating that proteolysis might be essential for therapy response. We then applied the proteasome inhibitors Epoxomicin/MG-132 in combination with Palbociclib. As shown, protein degradation of RRM2 was effectively blocked, but only partially for RRM1 (Figure 1F, Supplementary Figure S4A-B). We next tested the combination of Palbociclib with ubiquitin-like proteins (UBLs) inhibitor MLN4924 and proved that the initial degradation of RRM1/2

此外,使用活细胞监测系统也观察到了组合组的协同作用和衰老形态(补充图 S7A)。然而,无法观察到通过 Caspase3/7 发生的细胞凋亡(补充图 S7B)。随后,在鸡绒毛膜(CAM)和小鼠皮下异种移植模型这两种模型中对联合疗法进行了测试。两种单一疗法都能抑制肿瘤生长,而联合疗法的效果更强(图 1M,补充图 S8A-E)。通过基因表达谱交互分析(GEPIA),我们发现 RRM2 在肿瘤组织中显著上调,而 RRM1 和 RB 则没有差异(图 1N,补充图 S9A)。它们的高表达与较差的无病生存期(DFS)有关(补充图 S9B)。我们还从康奈尔/特伦托队列[10]中发现了 4 例原发性和配对晚期肿瘤并接受化疗的患者。其中,2 例患者(WCM088 和 WCM117)仅在转移瘤中出现 RRM2 扩增(补充图 S9C),提示 RRM2 扩增可能导致化疗耐药。此外,我们回顾性地从接受根治性膀胱切除术的患者中收集了20份肌肉浸润性BCa标本(补充表S7)。根据化疗反应将这些标本分为三个亚组。我们观察到化疗反应组的 RRM2 水平低于化疗未反应组,但化疗耐受组的 RRM2 水平有所升高(补充图 S9D-E)。我们在化疗耐药的BCa细胞系中测试了联合疗法,发现它们具有协同反应(图1O,补充图S9F-L)。总之,我们发现RRM2是BCa对Palbociclib产生获得性耐药性的关键介质(图1P)。RNR和CDK4/6的双重抑制可有效克服这种获得性耐药,有望成为化疗耐药BCa的潜在治疗策略。童志超、赵玉波、Lou Lienhard、白诗雨、王梓琪、赵玉玲、Thilo Bracht、Barbara Sitek设计研究并撰写手稿,潘琦、郭鹏宇、Benedikt Ebner分析数据。本研究得到了国家自然科学基金(82002688;U20A20385)、中国博士后科学基金(2021M693828)、黑龙江省博士后科研发展基金(LBH-Z22030)、国家重点研发计划(2021YFB3801000)的资助,研究程序得到了哈尔滨医科大学伦理审查委员会(2022-DWSYLLCZ-38;KY2023-62)的批准。
{"title":"The mechanism of resistance to CDK4/6 inhibition and novel combination therapy with RNR inhibition for chemo-resistant bladder cancer","authors":"Zhichao Tong,&nbsp;Yubo Zhao,&nbsp;Shiyu Bai,&nbsp;Benedikt Ebner,&nbsp;Lou Lienhard,&nbsp;Yuling Zhao,&nbsp;Ziqi Wang,&nbsp;Qi Pan,&nbsp;Pengyu Guo,&nbsp;Thilo Bracht,&nbsp;Barbara Sitek,&nbsp;Jürgen E. Gschwend,&nbsp;Wanhai Xu,&nbsp;Roman Nawroth","doi":"10.1002/cac2.12532","DOIUrl":"10.1002/cac2.12532","url":null,"abstract":"<p>Bladder cancer (BCa) is the most prevalent urological cancer worldwide [<span>1</span>]. A significant proportion of BCa (89%) exhibits molecular alterations in the cell cycle pathway, and targeting cyclin-dependent kinases 4 and 6 (CDK4/6) is deemed as a promising therapeutic strategy [<span>2</span>]. Selective inhibitors of CDK4/6 (CDK4/6is) have been approved by the US Food and Drug Administration (FDA) [<span>3</span>]. They could induce cell cycle arrest in BCa immediately, and after this “sensitive stage”, unknown compensatory mechanism may cause acquired resistance [<span>4, 5</span>]. To address this issue, our study employed multi-omics and identified ribonucleotide reductase regulatory subunit M2 (RRM2), a crucial component of the ribonucleotide reductase (RNR) complex [<span>6</span>], as a key mediator in conferring acquired resistance. We further investigated whether Palbociclib activates proteolysis of RRM2 by the ubiquitin-proteasome system (UPS) and the ubiquitin-like proteins (UBLs) during the sensitive stage. Additionally, we explored whether RRM2 is controlled by E2F transcription factor 3 (E2F3) when acquired resistance is established. Interestingly, upregulation of RRM2 may also cause chemotherapy resistance [<span>7</span>]. Thus, we verified if concurrent inhibition of RNR and CDK4/6 holds promise as a novel therapeutic strategy for BCa patients, especially those exhibit resistance to chemotherapy. All the study designs and methods are described in the Supplementary file.</p><p>Retinoblastoma (RB)-positive BCa elicits a sequential progression from sensitivity to resistance to Palbociclib [<span>8</span>]. We utilized multi-omics to identify key regulators of this process (Figure 1A, Supplementary Tables S1-S5). The only candidate matching all three high-throughput screening approaches was RRM2, and pathway analysis further demonstrated related mechanisms (Supplementary Figures S1-S2). To validate this finding, we examined the cell cycle distribution and expression levels of the other RNR subunit RRM1 and RRM2 in a time kinetic (Figure 1B-C, Supplementary Figure S3A-D). Transcript levels were initially downregulated, followed by a partial recovery, while the decline and recovery pattern of proteins mirrored this. We then transduced single-guide RNAs of RRM1 and RRM2 into T24 synergistic activation mediator (SAM) cells and confirmed partial resistance (Figure 1D-E, Supplementary Figure S3E). However, degradation of RRM2 was still observed at early time points (Supplementary Figure S3F), indicating that proteolysis might be essential for therapy response. We then applied the proteasome inhibitors Epoxomicin/MG-132 in combination with Palbociclib. As shown, protein degradation of RRM2 was effectively blocked, but only partially for RRM1 (Figure 1F, Supplementary Figure S4A-B). We next tested the combination of Palbociclib with ubiquitin-like proteins (UBLs) inhibitor MLN4924 and proved that the initial degradation of RRM1/2","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":null,"pages":null},"PeriodicalIF":20.1,"publicationDate":"2024-03-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11194448/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140101078","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Revealing the secret behind Epstein-Barr virus-specific tumor immune contexture. 揭示 Epstein-Barr 病毒特异性肿瘤免疫背景背后的秘密。
IF 16.2 1区 医学 Q1 Medicine Pub Date : 2024-03-06 DOI: 10.1002/cac2.12529
Chu-Xia Deng
{"title":"Revealing the secret behind Epstein-Barr virus-specific tumor immune contexture.","authors":"Chu-Xia Deng","doi":"10.1002/cac2.12529","DOIUrl":"https://doi.org/10.1002/cac2.12529","url":null,"abstract":"","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":null,"pages":null},"PeriodicalIF":16.2,"publicationDate":"2024-03-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140038740","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unveiling quality of clinical trial in China: from concern to confirmation 揭开中国临床试验质量的面纱:从关注到肯定。
IF 16.2 1区 医学 Q1 Medicine Pub Date : 2024-03-06 DOI: 10.1002/cac2.12528
Huiyao Huang, Yiru Hou, Hong Fang, Ling Xu, Yue Yu, Huifang Zhang, Jing Zhang, Yu Tang, Gongtao Lan, Wenbao Zhang, Ning Li

The cornerstone of scientifically valid and ethically sound clinical trials is in compliance with established global quality requirements. Although China has made significant progress over the past 20 years in terms of the clinical trial quantity [1], quality and participation in multiregional trials [2], there still remain concerns regarding the trial quality, which could be associated with the self-inspection initiative in 2015 [3].

In fact, the clinical trial quality in China has improved significantly during the past decade, which is reflected in the harmonized development trends of industry quality systems and regulatory quality promotion systems (Figure 1). In 2003, the China Good Clinical Practice (GCP) guidelines have been released, which identified the subject protection and data integrity as two basic principles of clinical trials. Four rigorous management policies started to implement in 2015, which required sponsors to re-evaluate the authenticity, integrity, and compliance of trial data before new drug application [4]. A series of high-profile policies were subsequently announced by the National Medical Products Administration, to improve quality ecosystem [5]. The regulatory supervision of trial quality in China has been significantly strengthened since then. In the meantime, a vital shift occurred since the quality culture in the industry emerged, and the approaches and tools of quality management systems were launched through information exchange and training.

Another milestone of trial quality progress in China was that China officially joined the International Council for Harmonization of Technical Requirements for Pharmaceuticals for Human Use and began to integrate into the international drug regulatory system. This alliance initiated a proactive and harmonized process with China pledging to gradually transform its pharmaceutical regulatory authorities, industry and institutions to implement the international coalition's technical standards and guidelines [6]. Universal quality standard GCP guidelines and ideas, such as quality by design (QbD) and risk-based inspection, could be implemented almost simultaneously in China. Gradually, trial quality culture has been embedded in the full life cycle of drug research and development (R&D) in China.

All four regions, including China, the European Union (EU), the United States (US) and Japan, have a common consensus and harmonized standards to ensure the participants’ safety, data integrity and GCP compliance, and all have established similar regulatory frameworks for quality compliance (Supplementary Table S1). For example, local and international GCP standards and principles should be established, then inspection processes and checklists with key points for investigational drugs should be employed. In terms of inspection objects, types, requirements and disclosure, we observed cons

2009年1月1日至2023年7月20日,美国FDA对在中国开展的试验进行了45次检查。不合格比例从48.0%(2009-2015年)上升到85.0%(2016-2023年)(P=0.018)(图3),表明中国的试验质量有了显著提高。同时,我们也应看到,中国仍面临一些质量挑战。首先,中国尚未建立透明的核查结果公开制度[8]。核查结果的公开有助于行业聚焦主要问题,主动进行风险管理,并与监管机构密切合作,提高整体试验质量。此外,中国还有一些新兴机构缺乏足够的经验和完善的质量管理体系。最后,分散试验和新技术应用带来的质量挑战也值得关注。与世界其他国家一样,中国也需要实施 QbD 规则,将临床研究质量从被动管理全面转变为主动管理。应制定和采用现代化的法规。黄慧瑶、侯怡如和方红参与了框架规划和草案撰写,以及信息收集、质量控制、分析和解释。李宁、张文宝和蓝功涛领导了总体框架规划和数据解释。徐玲、于越、张慧芳、张静和唐宇参与了信息收集、质量控制和数据解读。所有作者均审阅并修改了手稿。所有作者均未披露任何利益冲突。
{"title":"Unveiling quality of clinical trial in China: from concern to confirmation","authors":"Huiyao Huang,&nbsp;Yiru Hou,&nbsp;Hong Fang,&nbsp;Ling Xu,&nbsp;Yue Yu,&nbsp;Huifang Zhang,&nbsp;Jing Zhang,&nbsp;Yu Tang,&nbsp;Gongtao Lan,&nbsp;Wenbao Zhang,&nbsp;Ning Li","doi":"10.1002/cac2.12528","DOIUrl":"10.1002/cac2.12528","url":null,"abstract":"<p>The cornerstone of scientifically valid and ethically sound clinical trials is in compliance with established global quality requirements. Although China has made significant progress over the past 20 years in terms of the clinical trial quantity [<span>1</span>], quality and participation in multiregional trials [<span>2</span>], there still remain concerns regarding the trial quality, which could be associated with the self-inspection initiative in 2015 [<span>3</span>].</p><p>In fact, the clinical trial quality in China has improved significantly during the past decade, which is reflected in the harmonized development trends of industry quality systems and regulatory quality promotion systems (Figure 1). In 2003, the China Good Clinical Practice (GCP) guidelines have been released, which identified the subject protection and data integrity as two basic principles of clinical trials. Four rigorous management policies started to implement in 2015, which required sponsors to re-evaluate the authenticity, integrity, and compliance of trial data before new drug application [<span>4</span>]. A series of high-profile policies were subsequently announced by the National Medical Products Administration, to improve quality ecosystem [<span>5</span>]. The regulatory supervision of trial quality in China has been significantly strengthened since then. In the meantime, a vital shift occurred since the quality culture in the industry emerged, and the approaches and tools of quality management systems were launched through information exchange and training.</p><p>Another milestone of trial quality progress in China was that China officially joined the International Council for Harmonization of Technical Requirements for Pharmaceuticals for Human Use and began to integrate into the international drug regulatory system. This alliance initiated a proactive and harmonized process with China pledging to gradually transform its pharmaceutical regulatory authorities, industry and institutions to implement the international coalition's technical standards and guidelines [<span>6</span>]. Universal quality standard GCP guidelines and ideas, such as quality by design (QbD) and risk-based inspection, could be implemented almost simultaneously in China. Gradually, trial quality culture has been embedded in the full life cycle of drug research and development (R&amp;D) in China.</p><p>All four regions, including China, the European Union (EU), the United States (US) and Japan, have a common consensus and harmonized standards to ensure the participants’ safety, data integrity and GCP compliance, and all have established similar regulatory frameworks for quality compliance (Supplementary Table S1). For example, local and international GCP standards and principles should be established, then inspection processes and checklists with key points for investigational drugs should be employed. In terms of inspection objects, types, requirements and disclosure, we observed cons","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":null,"pages":null},"PeriodicalIF":16.2,"publicationDate":"2024-03-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cac2.12528","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140038741","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Updated overall survival and circulating tumor DNA analysis of ensartinib for crizotinib-refractory ALK-positive NSCLC from a phase II study. 一项II期研究对恩沙替尼治疗克唑替尼难治性ALK阳性NSCLC的最新总生存期和循环肿瘤DNA分析。
IF 16.2 1区 医学 Q1 Medicine Pub Date : 2024-02-29 DOI: 10.1002/cac2.12524
Jing Zheng, Tao Wang, Yunpeng Yang, Jie Huang, Jifeng Feng, Wu Zhuang, Jianhua Chen, Jun Zhao, Wei Zhong, Yanqiu Zhao, Yiping Zhang, Yong Song, Yi Hu, Zhuang Yu, Youling Gong, Yuan Chen, Feng Ye, Shucai Zhang, Lejie Cao, Yun Fan, Gang Wu, Yubiao Guo, Chengzhi Zhou, Kewei Ma, Jian Fang, Weineng Feng, Yunpeng Liu, Zhendong Zheng, Gaofeng Li, Huijie Wang, Shundong Cang, Ning Wu, Wei Song, Xiaoqing Liu, Shijun Zhao, Lieming Ding, Giovanni Selvaggi, Yang Wang, Shanshan Xiao, Qian Wang, Zhilin Shen, Jianya Zhou, Jianying Zhou, Li Zhang

Background: The initial phase II stuty (NCT03215693) demonstrated that ensartinib has shown clinical activity in patients with advanced crizotinib-refractory, anaplastic lymphoma kinase (ALK)-positive non-small cell lung cancer (NSCLC). Herein, we reported the updated data on overall survival (OS) and molecular profiling from the initial phase II study.

Methods: In this study, 180 patients received 225 mg of ensartinib orally once daily until disease progression, death or withdrawal. OS was estimated by Kaplan-Meier methods with two-sided 95% confidence intervals (CIs). Next-generation sequencing was employed to explore prognostic biomarkers based on plasma samples collected at baseline and after initiating ensartinib. Circulating tumor DNA (ctDNA) was detected to dynamically monitor the genomic alternations during treatment and indicate the existence of molecular residual disease, facilitating improvement of clinical management.

Results: At the data cut-off date (August 31, 2022), with a median follow-up time of 53.2 months, 97 of 180 (53.9%) patients had died. The median OS was 42.8 months (95% CI: 29.3-53.2 months). A total of 333 plasma samples from 168 patients were included for ctDNA analysis. An inferior OS correlated significantly with baseline ALK or tumor protein 53 (TP53) mutation. In addition, patients with concurrent TP53 mutations had shorter OS than those without concurrent TP53 mutations. High ctDNA levels evaluated by variant allele frequency (VAF) and haploid genome equivalents per milliliter of plasma (hGE/mL) at baseline were associated with poor OS. Additionally, patients with ctDNA clearance at 6 weeks and slow ascent growth had dramatically longer OS than those with ctDNA residual and fast ascent growth, respectively. Furthermore, patients who had a lower tumor burden, as evaluated by the diameter of target lesions, had a longer OS. Multivariate Cox regression analysis further uncovered the independent prognostic values of bone metastases, higher hGE, and elevated ALK mutation abundance at 6 weeks.

Conclusion: Ensartinib led to a favorable OS in patients with advanced, crizotinib-resistant, and ALK-positive NSCLC. Quantification of ctDNA levels also provided valuable prognostic information for risk stratification.

研究背景最初的II期研究(NCT03215693)表明,恩沙替尼对克唑替尼难治性、无性淋巴瘤激酶(ALK)阳性的晚期非小细胞肺癌(NSCLC)患者具有临床活性。在此,我们报告了初始II期研究中有关总生存期(OS)和分子谱分析的最新数据:在这项研究中,180名患者每天一次口服225毫克恩沙替尼,直至疾病进展、死亡或停药。采用Kaplan-Meier方法估算OS,双侧95%置信区间(CI)。根据基线和开始服用恩沙替尼后收集的血浆样本,采用新一代测序技术探索预后生物标志物。检测循环肿瘤DNA(ctDNA)可动态监测治疗过程中的基因组变化,并显示是否存在分子残留疾病,从而有助于改善临床管理:截至数据截止日(2022年8月31日),中位随访时间为53.2个月,180例患者中有97例(53.9%)死亡。中位生存期为 42.8 个月(95% CI:29.3-53.2 个月)。ctDNA分析共纳入了168名患者的333份血浆样本。较差的OS与基线ALK或肿瘤蛋白53(TP53)突变密切相关。此外,与未同时发生TP53突变的患者相比,同时发生TP53突变的患者的OS更短。根据变异等位基因频率(VAF)和每毫升血浆单倍体基因组当量(hGE/mL)评估,基线ctDNA水平高与OS差相关。此外,与ctDNA残留和快速上升的患者相比,ctDNA在6周时清除和缓慢上升的患者的OS显著延长。此外,根据靶病灶直径评估的肿瘤负荷较低的患者的手术时间也较长。多变量考克斯回归分析进一步揭示了骨转移、较高的hGE和6周时ALK突变丰度升高的独立预后价值:结论:对于克唑替尼耐药和ALK阳性的晚期NSCLC患者,恩沙替尼可带来良好的OS。ctDNA水平的量化也为风险分层提供了有价值的预后信息。
{"title":"Updated overall survival and circulating tumor DNA analysis of ensartinib for crizotinib-refractory ALK-positive NSCLC from a phase II study.","authors":"Jing Zheng, Tao Wang, Yunpeng Yang, Jie Huang, Jifeng Feng, Wu Zhuang, Jianhua Chen, Jun Zhao, Wei Zhong, Yanqiu Zhao, Yiping Zhang, Yong Song, Yi Hu, Zhuang Yu, Youling Gong, Yuan Chen, Feng Ye, Shucai Zhang, Lejie Cao, Yun Fan, Gang Wu, Yubiao Guo, Chengzhi Zhou, Kewei Ma, Jian Fang, Weineng Feng, Yunpeng Liu, Zhendong Zheng, Gaofeng Li, Huijie Wang, Shundong Cang, Ning Wu, Wei Song, Xiaoqing Liu, Shijun Zhao, Lieming Ding, Giovanni Selvaggi, Yang Wang, Shanshan Xiao, Qian Wang, Zhilin Shen, Jianya Zhou, Jianying Zhou, Li Zhang","doi":"10.1002/cac2.12524","DOIUrl":"https://doi.org/10.1002/cac2.12524","url":null,"abstract":"<p><strong>Background: </strong>The initial phase II stuty (NCT03215693) demonstrated that ensartinib has shown clinical activity in patients with advanced crizotinib-refractory, anaplastic lymphoma kinase (ALK)-positive non-small cell lung cancer (NSCLC). Herein, we reported the updated data on overall survival (OS) and molecular profiling from the initial phase II study.</p><p><strong>Methods: </strong>In this study, 180 patients received 225 mg of ensartinib orally once daily until disease progression, death or withdrawal. OS was estimated by Kaplan-Meier methods with two-sided 95% confidence intervals (CIs). Next-generation sequencing was employed to explore prognostic biomarkers based on plasma samples collected at baseline and after initiating ensartinib. Circulating tumor DNA (ctDNA) was detected to dynamically monitor the genomic alternations during treatment and indicate the existence of molecular residual disease, facilitating improvement of clinical management.</p><p><strong>Results: </strong>At the data cut-off date (August 31, 2022), with a median follow-up time of 53.2 months, 97 of 180 (53.9%) patients had died. The median OS was 42.8 months (95% CI: 29.3-53.2 months). A total of 333 plasma samples from 168 patients were included for ctDNA analysis. An inferior OS correlated significantly with baseline ALK or tumor protein 53 (TP53) mutation. In addition, patients with concurrent TP53 mutations had shorter OS than those without concurrent TP53 mutations. High ctDNA levels evaluated by variant allele frequency (VAF) and haploid genome equivalents per milliliter of plasma (hGE/mL) at baseline were associated with poor OS. Additionally, patients with ctDNA clearance at 6 weeks and slow ascent growth had dramatically longer OS than those with ctDNA residual and fast ascent growth, respectively. Furthermore, patients who had a lower tumor burden, as evaluated by the diameter of target lesions, had a longer OS. Multivariate Cox regression analysis further uncovered the independent prognostic values of bone metastases, higher hGE, and elevated ALK mutation abundance at 6 weeks.</p><p><strong>Conclusion: </strong>Ensartinib led to a favorable OS in patients with advanced, crizotinib-resistant, and ALK-positive NSCLC. Quantification of ctDNA levels also provided valuable prognostic information for risk stratification.</p>","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":null,"pages":null},"PeriodicalIF":16.2,"publicationDate":"2024-02-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139995723","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Targeting autophagy overcomes cancer-intrinsic resistance to CAR-T immunotherapy in B-cell malignancies 以自噬为靶点克服B细胞恶性肿瘤对CAR-T免疫疗法的内在抗药性。
IF 16.2 1区 医学 Q1 Medicine Pub Date : 2024-02-26 DOI: 10.1002/cac2.12525
Lu Tang, Huan Zhang, Fen Zhou, Qiuzhe Wei, Mengyi Du, Jianghua Wu, Chenggong Li, Wenjing Luo, Jie Zhou, Xindi Wang, Zhaozhao Chen, Yinqiang Zhang, Zhongpei Huang, Zhuolin Wu, Yuxi Wen, Huiwen Jiang, Danying Liao, Haiming Kou, Wei Xiong, Heng Mei, Yu Hu

Background

Chimeric antigen receptor T (CAR-T) therapy has substantially revolutionized the clinical outcomes of patients with hematologic malignancies, but the cancer-intrinsic mechanisms underlying resistance to CAR-T cells remain yet to be fully understood. This study aims to explore the molecular determinants of cancer cell sensitivity to CAR-T cell-mediated killing and to provide a better understanding of the underlying mechanisms and potential modulation to improve clinical efficacy.

Methods

The human whole-genome CRISPR/Cas9-based knockout screening was conducted to identify key genes that enable cancer cells to evade CD19 CAR-T-cell-mediated killing. The in vitro cytotoxicity assays and evaluation of tumor tissue and bone marrow specimens were further conducted to confirm the role of the key genes in cancer cell susceptibility to CAR-T cells. In addition, the specific mechanisms influencing CAR-T cell-mediated cancer clearance were elucidated in mouse and cellular models.

Results

The CRISPR/Cas9-based knockout screening showed that the enrichment of autophagy-related genes (ATG3, BECN1, and RB1CC1) provided protection of cancer cells from CD19 CAR-T cell-mediated cytotoxicity. These findings were further validated by in vitro cytotoxicity assays in cells with genetic and pharmacological inhibition of autophagy. Notably, higher expression of the three autophagy-related proteins in tumor samples was correlated with poorer responsiveness and worse survival in patients with relapsed/refractory B-cell lymphoma after CD19 CAR-T therapy. Bulk RNA sequencing analysis of bone marrow samples from B-cell leukemia patients also suggested the clinical relevance of autophagy to the therapeutic response and relapse after CD19 CAR-T cell therapy. Pharmacological inhibition of autophagy and knockout of RB1CC1 could dramatically sensitize tumor cells to CD19 CAR-T cell-mediated killing in mouse models of both B-cell leukemia and lymphoma. Moreover, our study revealed that cancer-intrinsic autophagy mediates evasion of CAR-T cells via the TNF-α-TNFR1 axis-mediated apoptosis and STAT1/IRF1-induced chemokine signaling activation.

Conclusions

These findings confirm that autophagy signaling in B-cell malignancies is essential for the effective cytotoxic function of CAR-T cells and thereby pave the way for the development of autophagy-targeting strategies to improve the clinical efficacy of CAR-T cell i

背景:嵌合抗原受体T(CAR-T)疗法极大地改变了血液恶性肿瘤患者的临床疗效,但CAR-T细胞耐药性的癌症内在机制仍有待全面了解。本研究旨在探索癌细胞对CAR-T细胞介导的杀伤敏感性的分子决定因素,从而更好地了解其潜在机制和可能的调控,以提高临床疗效:方法:通过基于CRISPR/Cas9的人类全基因组基因敲除筛选,找出使癌细胞逃避CD19 CAR-T细胞介导的杀伤的关键基因。通过体外细胞毒性实验以及对肿瘤组织和骨髓标本的评估,进一步证实了这些关键基因在癌细胞对 CAR-T 细胞易感性中的作用。此外,还在小鼠和细胞模型中阐明了影响CAR-T细胞介导的癌症清除的具体机制:结果:基于CRISPR/Cas9的基因敲除筛选显示,自噬相关基因(ATG3、BECN1和RB1CC1)的富集可保护癌细胞不受CD19 CAR-T细胞介导的细胞毒性的影响。对自噬进行基因和药物抑制的细胞进行体外细胞毒性实验进一步验证了这些发现。值得注意的是,三种自噬相关蛋白在肿瘤样本中的高表达与CD19 CAR-T疗法后复发/难治性B细胞淋巴瘤患者的较差反应性和较差存活率相关。对B细胞白血病患者骨髓样本的大量RNA测序分析也表明,自噬与CD19 CAR-T细胞疗法后的治疗反应和复发具有临床相关性。在B细胞白血病和淋巴瘤的小鼠模型中,药理抑制自噬和敲除RB1CC1可使肿瘤细胞对CD19 CAR-T细胞介导的杀伤显著敏感。此外,我们的研究还发现,癌症内在自噬通过 TNF-α-TNFR1 轴介导的细胞凋亡和 STAT1/IRF1 诱导的趋化因子信号激活,介导 CAR-T 细胞的逃避:这些发现证实了自噬信号在 B 细胞恶性肿瘤中对 CAR-T 细胞的有效细胞毒性功能至关重要,从而为开发自噬靶向策略以提高 CAR-T 细胞免疫疗法的临床疗效铺平了道路。
{"title":"Targeting autophagy overcomes cancer-intrinsic resistance to CAR-T immunotherapy in B-cell malignancies","authors":"Lu Tang,&nbsp;Huan Zhang,&nbsp;Fen Zhou,&nbsp;Qiuzhe Wei,&nbsp;Mengyi Du,&nbsp;Jianghua Wu,&nbsp;Chenggong Li,&nbsp;Wenjing Luo,&nbsp;Jie Zhou,&nbsp;Xindi Wang,&nbsp;Zhaozhao Chen,&nbsp;Yinqiang Zhang,&nbsp;Zhongpei Huang,&nbsp;Zhuolin Wu,&nbsp;Yuxi Wen,&nbsp;Huiwen Jiang,&nbsp;Danying Liao,&nbsp;Haiming Kou,&nbsp;Wei Xiong,&nbsp;Heng Mei,&nbsp;Yu Hu","doi":"10.1002/cac2.12525","DOIUrl":"10.1002/cac2.12525","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background</h3>\u0000 \u0000 <p>Chimeric antigen receptor T (CAR-T) therapy has substantially revolutionized the clinical outcomes of patients with hematologic malignancies, but the cancer-intrinsic mechanisms underlying resistance to CAR-T cells remain yet to be fully understood. This study aims to explore the molecular determinants of cancer cell sensitivity to CAR-T cell-mediated killing and to provide a better understanding of the underlying mechanisms and potential modulation to improve clinical efficacy.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>The human whole-genome CRISPR/Cas9-based knockout screening was conducted to identify key genes that enable cancer cells to evade CD19 CAR-T-cell-mediated killing. The in vitro cytotoxicity assays and evaluation of tumor tissue and bone marrow specimens were further conducted to confirm the role of the key genes in cancer cell susceptibility to CAR-T cells. In addition, the specific mechanisms influencing CAR-T cell-mediated cancer clearance were elucidated in mouse and cellular models.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>The CRISPR/Cas9-based knockout screening showed that the enrichment of autophagy-related genes (<i>ATG3</i>, <i>BECN1</i>, and <i>RB1CC1</i>) provided protection of cancer cells from CD19 CAR-T cell-mediated cytotoxicity. These findings were further validated by in vitro cytotoxicity assays in cells with genetic and pharmacological inhibition of autophagy. Notably, higher expression of the three autophagy-related proteins in tumor samples was correlated with poorer responsiveness and worse survival in patients with relapsed/refractory B-cell lymphoma after CD19 CAR-T therapy. Bulk RNA sequencing analysis of bone marrow samples from B-cell leukemia patients also suggested the clinical relevance of autophagy to the therapeutic response and relapse after CD19 CAR-T cell therapy. Pharmacological inhibition of autophagy and knockout of RB1CC1 could dramatically sensitize tumor cells to CD19 CAR-T cell-mediated killing in mouse models of both B-cell leukemia and lymphoma. Moreover, our study revealed that cancer-intrinsic autophagy mediates evasion of CAR-T cells via the TNF-α-TNFR1 axis-mediated apoptosis and STAT1/IRF1-induced chemokine signaling activation.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>These findings confirm that autophagy signaling in B-cell malignancies is essential for the effective cytotoxic function of CAR-T cells and thereby pave the way for the development of autophagy-targeting strategies to improve the clinical efficacy of CAR-T cell i","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":null,"pages":null},"PeriodicalIF":16.2,"publicationDate":"2024-02-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cac2.12525","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139970976","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
SERPINE2 promotes liver cancer metastasis by inhibiting c-Cbl-mediated EGFR ubiquitination and degradation SERPINE2 通过抑制 c-Cbl 介导的表皮生长因子受体泛素化和降解,促进肝癌转移。
IF 16.2 1区 医学 Q1 Medicine Pub Date : 2024-02-26 DOI: 10.1002/cac2.12527
Shiyu Zhang, Xing Jia, Haojiang Dai, Xingxin Zhu, Wenfeng Song, Suchen Bian, Hao Wu, Shinuo Chen, Yangbo Tang, Junran Chen, Cheng Jin, Mengqiao Zhou, Haiyang Xie, Shusen Zheng, Penghong Song

Background

Liver cancer is a malignancy with high morbidity and mortality rates. Serpin family E member 2 (SERPINE2) has been reported to play a key role in the metastasis of many tumors. In this study, we aimed to investigate the potential mechanism of SERPINE2 in liver cancer metastasis.

Methods

The Cancer Genome Atlas database (TCGA), including DNA methylation and transcriptome sequencing data, was utilized to identify the crucial oncogene associated with DNA methylation and cancer progression in liver cancer. Data from the TCGA and RNA sequencing for 94 pairs of liver cancer tissues were used to explore the correlation between SERPINE2 expression and clinical parameters of patients. DNA methylation sequencing was used to detect the DNA methylation levels in liver cancer tissues and cells. RNA sequencing, cytokine assays, immunoprecipitation (IP) and mass spectrometry (MS) assays, protein stability assays, and ubiquitination assays were performed to explore the regulatory mechanism of SERPINE2 in liver cancer metastasis. Patient-derived xenografts and tumor organoid models were established to determine the role of SERPINE2 in the treatment of liver cancer using sorafenib.

Results

Based on the public database screening, SERPINE2 was identified as a tumor promoter regulated by DNA methylation. SERPINE2 expression was significantly higher in liver cancer tissues and was associated with the dismal prognosis in patients with liver cancer. SERPINE2 promoted liver cancer metastasis by enhancing cell pseudopodia formation, cell adhesion, cancer-associated fibroblast activation, extracellular matrix remodeling, and angiogenesis. IP/MS assays confirmed that SERPINE2 activated epidermal growth factor receptor (EGFR) and its downstream signaling pathways by interacting with EGFR. Mechanistically, SERPINE2 inhibited EGFR ubiquitination and maintained its protein stability by competing with the E3 ubiquitin ligase, c-Cbl. Additionally, EGFR was activated in liver cancer cells after sorafenib treatment, and SERPINE2 knockdown-induced EGFR downregulation significantly enhanced the therapeutic efficacy of sorafenib against liver cancer. Furthermore, we found that SERPINE2 knockdown also had a sensitizing effect on lenvatinib treatment.

Conclusions

SERPINE2 promoted liver cancer metastasis by preventing EGFR degradation via c-Cbl-mediated ubiquitination, suggesting that inhibition of the SERPINE2-EGFR axis may be a potenti

背景:肝癌是一种发病率和死亡率都很高的恶性肿瘤。据报道,丝氨酸蛋白家族 E 成员 2(SERPINE2)在许多肿瘤的转移中起着关键作用。本研究旨在探讨SERPINE2在肝癌转移中的潜在机制:方法:利用癌症基因组图谱数据库(TCGA),包括DNA甲基化和转录组测序数据,确定肝癌中与DNA甲基化和癌症进展相关的关键癌基因。研究人员利用 TCGA 数据和 94 对肝癌组织的 RNA 测序数据,探讨了 SERPINE2 表达与患者临床参数之间的相关性。DNA甲基化测序用于检测肝癌组织和细胞中的DNA甲基化水平。通过RNA测序、细胞因子检测、免疫沉淀(IP)和质谱(MS)检测、蛋白质稳定性检测和泛素化检测来探讨SERPINE2在肝癌转移中的调控机制。建立了患者来源的异种移植和肿瘤类器官模型,以确定SERPINE2在索拉非尼治疗肝癌中的作用:根据公共数据库筛选,SERPINE2被确定为受DNA甲基化调控的肿瘤启动子。SERPINE2在肝癌组织中的表达明显升高,并与肝癌患者的预后不良有关。SERPINE2通过增强细胞伪足形成、细胞粘附、癌相关成纤维细胞活化、细胞外基质重塑和血管生成,促进肝癌转移。IP/MS测定证实,SERPINE2通过与表皮生长因子受体(EGFR)相互作用,激活了表皮生长因子受体(EGFR)及其下游信号通路。从机理上讲,SERPINE2 通过与 E3 泛素连接酶 c-Cbl 竞争,抑制了表皮生长因子受体的泛素化,并保持了其蛋白质的稳定性。此外,索拉非尼治疗后肝癌细胞中的表皮生长因子受体被激活,而 SERPINE2 敲除诱导的表皮生长因子受体下调能显著增强索拉非尼对肝癌的疗效。此外,我们还发现敲除SERPINE2对来伐替尼治疗也有增敏作用:结论:SERPINE2通过c-Cbl介导的泛素化阻止表皮生长因子受体(EGFR)降解,从而促进肝癌转移。
{"title":"SERPINE2 promotes liver cancer metastasis by inhibiting c-Cbl-mediated EGFR ubiquitination and degradation","authors":"Shiyu Zhang,&nbsp;Xing Jia,&nbsp;Haojiang Dai,&nbsp;Xingxin Zhu,&nbsp;Wenfeng Song,&nbsp;Suchen Bian,&nbsp;Hao Wu,&nbsp;Shinuo Chen,&nbsp;Yangbo Tang,&nbsp;Junran Chen,&nbsp;Cheng Jin,&nbsp;Mengqiao Zhou,&nbsp;Haiyang Xie,&nbsp;Shusen Zheng,&nbsp;Penghong Song","doi":"10.1002/cac2.12527","DOIUrl":"10.1002/cac2.12527","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background</h3>\u0000 \u0000 <p>Liver cancer is a malignancy with high morbidity and mortality rates. Serpin family E member 2 (SERPINE2) has been reported to play a key role in the metastasis of many tumors. In this study, we aimed to investigate the potential mechanism of SERPINE2 in liver cancer metastasis.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>The Cancer Genome Atlas database (TCGA), including DNA methylation and transcriptome sequencing data, was utilized to identify the crucial oncogene associated with DNA methylation and cancer progression in liver cancer. Data from the TCGA and RNA sequencing for 94 pairs of liver cancer tissues were used to explore the correlation between SERPINE2 expression and clinical parameters of patients. DNA methylation sequencing was used to detect the DNA methylation levels in liver cancer tissues and cells. RNA sequencing, cytokine assays, immunoprecipitation (IP) and mass spectrometry (MS) assays, protein stability assays, and ubiquitination assays were performed to explore the regulatory mechanism of SERPINE2 in liver cancer metastasis. Patient-derived xenografts and tumor organoid models were established to determine the role of SERPINE2 in the treatment of liver cancer using sorafenib.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Based on the public database screening, SERPINE2 was identified as a tumor promoter regulated by DNA methylation. SERPINE2 expression was significantly higher in liver cancer tissues and was associated with the dismal prognosis in patients with liver cancer. SERPINE2 promoted liver cancer metastasis by enhancing cell pseudopodia formation, cell adhesion, cancer-associated fibroblast activation, extracellular matrix remodeling, and angiogenesis. IP/MS assays confirmed that SERPINE2 activated epidermal growth factor receptor (EGFR) and its downstream signaling pathways by interacting with EGFR. Mechanistically, SERPINE2 inhibited EGFR ubiquitination and maintained its protein stability by competing with the E3 ubiquitin ligase, c-Cbl. Additionally, EGFR was activated in liver cancer cells after sorafenib treatment, and SERPINE2 knockdown-induced EGFR downregulation significantly enhanced the therapeutic efficacy of sorafenib against liver cancer. Furthermore, we found that SERPINE2 knockdown also had a sensitizing effect on lenvatinib treatment.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>SERPINE2 promoted liver cancer metastasis by preventing EGFR degradation via c-Cbl-mediated ubiquitination, suggesting that inhibition of the SERPINE2-EGFR axis may be a potenti","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":null,"pages":null},"PeriodicalIF":16.2,"publicationDate":"2024-02-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cac2.12527","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139970975","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
NAT10-mediated ac4C-modified ANKZF1 promotes tumor progression and lymphangiogenesis in clear-cell renal cell carcinoma by attenuating YWHAE-driven cytoplasmic retention of YAP1 NAT10 介导的 ac4 C 修饰的 ANKZF1 通过减弱 YWHAE 驱动的 YAP1 胞质滞留,促进透明细胞肾细胞癌的肿瘤进展和淋巴管生成。
IF 16.2 1区 医学 Q1 Medicine Pub Date : 2024-02-26 DOI: 10.1002/cac2.12523
Daojia Miao, Jian Shi, Qingyang Lv, Diaoyi Tan, Chuanyi Zhao, Zhiyong Xiong, Xiaoping Zhang

Background

Lymphatic metastasis is one of the most common metastatic routes and indicates a poor prognosis in clear-cell renal cell carcinoma (ccRCC). N-acetyltransferase 10 (NAT10) is known to catalyze N4-acetylcytidine (ac4C) modification of mRNA and participate in many cellular processes. However, its role in the lymphangiogenic process of ccRCC has not been reported. This study aimed to elucidate the role of NAT10 in ccRCC lymphangiogenesis, providing valuable insights into potential therapeutic targets for intervention.

Methods

ac4C modification and NAT10 expression levels in ccRCC were assessed using public databases and clinical samples. Functional investigations involved manipulating NAT10 expression in cellular and mouse models to study its role in ccRCC. Mechanistic insights were gained through a combination of RNA sequencing, mass spectrometry, co-immunoprecipitation, RNA immunoprecipitation, immunofluorescence, and site-specific mutation analyses.

Results

We found that ac4C modification and NAT10 expression levels increased in ccRCC. NAT10 promoted tumor progression and lymphangiogenesis of ccRCC by enhancing the nuclear import of Yes1-associated transcriptional regulator (YAP1). Subsequently, we identified ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 (ANKZF1) as the functional target of NAT10, and its upregulation in ccRCC was caused by NAT10-mediated ac4C modification. Mechanistic analyses demonstrated that ANKZF1 interacted with tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon (YWHAE) to competitively inhibit cytoplasmic retention of YAP1, leading to transcriptional activation of pro-lymphangiogenic factors.

Conclusions

These results suggested a pro-cancer role of NAT10-mediated acetylation in ccRCC and identified the NAT10/ANKZF1/YAP1 axis as an under-reported pathway involving tumor progression and lymphangiogenesis in ccRCC.

背景:淋巴转移是最常见的转移途径之一,预示着透明细胞肾细胞癌(ccRCC)的不良预后。众所周知,N-乙酰转移酶 10(NAT10)可催化 mRNA 的 N4-乙酰胞苷(ac4 C)修饰,并参与许多细胞过程。然而,它在ccRCC淋巴管生成过程中的作用尚未见报道。本研究旨在阐明NAT10在ccRCC淋巴管生成过程中的作用,为潜在的治疗靶点提供有价值的见解。方法:利用公共数据库和临床样本评估ccRCC中ac4 C修饰和NAT10的表达水平。功能研究包括在细胞和小鼠模型中操纵 NAT10 的表达,以研究其在 ccRCC 中的作用。通过结合 RNA 测序、质谱分析、共免疫沉淀、RNA 免疫沉淀、免疫荧光和位点特异性突变分析,我们获得了对机理的深入了解:结果:我们发现ac4 C修饰和NAT10在ccRCC中的表达水平升高。NAT10通过增强Yes1相关转录调节因子(YAP1)的核导入促进了ccRCC的肿瘤进展和淋巴管生成。随后,我们发现杏仁蛋白重复和锌指肽基tRNA水解酶1(ANKZF1)是NAT10的功能靶标,其在ccRCC中的上调是由NAT10介导的ac4 C修饰引起的。机理分析表明,ANKZF1与酪氨酸3-单氧化酶/色氨酸5-单氧化酶活化蛋白epsilon(YWHAE)相互作用,竞争性抑制YAP1的细胞质滞留,导致促淋巴管生成因子的转录激活:这些结果表明了NAT10介导的乙酰化在ccRCC中的促癌作用,并确定了NAT10/ANKZF1/YAP1轴是ccRCC中涉及肿瘤进展和淋巴管生成的一个未被充分报道的通路。
{"title":"NAT10-mediated ac4C-modified ANKZF1 promotes tumor progression and lymphangiogenesis in clear-cell renal cell carcinoma by attenuating YWHAE-driven cytoplasmic retention of YAP1","authors":"Daojia Miao,&nbsp;Jian Shi,&nbsp;Qingyang Lv,&nbsp;Diaoyi Tan,&nbsp;Chuanyi Zhao,&nbsp;Zhiyong Xiong,&nbsp;Xiaoping Zhang","doi":"10.1002/cac2.12523","DOIUrl":"10.1002/cac2.12523","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background</h3>\u0000 \u0000 <p>Lymphatic metastasis is one of the most common metastatic routes and indicates a poor prognosis in clear-cell renal cell carcinoma (ccRCC). N-acetyltransferase 10 (NAT10) is known to catalyze N4-acetylcytidine (ac<sup>4</sup>C) modification of mRNA and participate in many cellular processes. However, its role in the lymphangiogenic process of ccRCC has not been reported. This study aimed to elucidate the role of NAT10 in ccRCC lymphangiogenesis, providing valuable insights into potential therapeutic targets for intervention.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>ac<sup>4</sup>C modification and NAT10 expression levels in ccRCC were assessed using public databases and clinical samples. Functional investigations involved manipulating NAT10 expression in cellular and mouse models to study its role in ccRCC. Mechanistic insights were gained through a combination of RNA sequencing, mass spectrometry, co-immunoprecipitation, RNA immunoprecipitation, immunofluorescence, and site-specific mutation analyses.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>We found that ac<sup>4</sup>C modification and NAT10 expression levels increased in ccRCC. NAT10 promoted tumor progression and lymphangiogenesis of ccRCC by enhancing the nuclear import of Yes1-associated transcriptional regulator (YAP1). Subsequently, we identified ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 (ANKZF1) as the functional target of NAT10, and its upregulation in ccRCC was caused by NAT10-mediated ac<sup>4</sup>C modification. Mechanistic analyses demonstrated that ANKZF1 interacted with tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon (YWHAE) to competitively inhibit cytoplasmic retention of YAP1, leading to transcriptional activation of pro-lymphangiogenic factors.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>These results suggested a pro-cancer role of NAT10-mediated acetylation in ccRCC and identified the NAT10/ANKZF1/YAP1 axis as an under-reported pathway involving tumor progression and lymphangiogenesis in ccRCC.</p>\u0000 </section>\u0000 </div>","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":null,"pages":null},"PeriodicalIF":16.2,"publicationDate":"2024-02-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cac2.12523","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139970974","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A novel strategy for treating oncogene-mutated tumors by targeting tumor microenvironment and synergistically enhancing anti-PD-1 immunotherapy 通过靶向肿瘤微环境和协同增强抗 PD-1 免疫疗法治疗癌基因突变肿瘤的新策略。
IF 16.2 1区 医学 Q1 Medicine Pub Date : 2024-02-09 DOI: 10.1002/cac2.12521
Yingqiang Liu, Linjiang Tong, Mengge Zhang, Qi Zhang, Qiupei Liu, Fang Feng, Yan Li, Mengzhen Lai, Haotian Tang, Yi Chen, Meiyu Geng, Wenhu Duan, Jian Ding, Hua Xie

Oncogenes are critical factors in tumorigenesis of diverse cancer types and play essential roles in tumor immune escape. Mutations in Kirsten rat sarcoma viral oncogene homolog (KRAS) and epidermal growth factor receptor (EGFR) are among the most frequent gain-of-function alterations [1]. After many years of in-depth research, inhibitors targeting EGFR or KRAS mutations have been successfully developed, however, their clinical benefit is relatively limited, and they will inevitably encounter the challenge of drug resistance. The emergence of resistance is attributed to secondary mutations in driver genes and other complicated factors. It is worth noting that approved treatment strategies are currently lacking for tumors with different types of KRAS or EGFR mutations, including KRASG12D, KRASG13D, and EGFRC797S mutations that are common in tumors [2]. Additionally, oncogene mutations could trigger a cascade of tumor microenvironment changes, ultimately resulting in tumor progression or resistance to programmed death-1 (PD-1) antibody therapy [3, 4]. SYHA1813, a novel vascular endothelial growth factor receptor (VEGFR) and colony-stimulating factor 1 receptor (CSF1R) dual inhibitor, exhibited potent preclinical anti-glioma activity by inhibiting angiogenesis and promoting tumor immunity and showed promising efficacy in an ongoing clinical study (ChiCTR2100045380) [5, 6]. Here, we determined SYHA1813's antitumor activity in tumor models bearing KRAS or EGFR mutations.

We first examined the effects of SYHA1813 against cell line-derived xenograft (CDX) tumor models containing KRASG12C mutation (NCI-H358 lung cancer), KRASG12D mutation (PANC-1 pancreatic cancer) and wild-type KRAS (KRASWT) (HT-29 colorectal cancer). The results demonstrated that oral administration of SYHA1813 at a dose of 10 mg/kg significantly reduced tumor growth in the NCI-H358 xenograft model, with comparable efficacy to the US Food and Drug Administration (FDA) approved KRASG12C inhibitor sotorasib (AMG510) (Figure 1A). SYHA1813 treatment also resulted in tumor regression in PANC-1 and HT-29 xenograft models (Figure 1B-C). No significant body weight loss was observed in all groups (Supplementary Figure S1). Moreover, considering the emergence of drug resistance as a significant challenge of AMG510, we established a drug resistance model of AMG510 (designated as AMG510R). We found that although AMG510 exhibited attenuated efficacy against the AMG510R model compared to the NCI-H358 model, SYHA1813 could still suppress the growth of drug-resistant tumors at the same dose (Figure 1D). Furthermore, SYHA1813 was evaluated in two patient-derived xenograft (PDX) models, including gastric tumor model GC-1-005 (KRASG13D) and colorect

癌基因是多种癌症类型肿瘤发生的关键因素,在肿瘤免疫逃逸中发挥着重要作用。Kirsten 大鼠肉瘤病毒癌基因同源物(KRAS)和表皮生长因子受体(EGFR)的突变是最常见的功能获得性改变[1]。经过多年的深入研究,针对表皮生长因子受体(EGFR)或 KRAS 突变的抑制剂已被成功开发出来,但其临床疗效相对有限,且不可避免地会遇到耐药性的挑战。耐药性的出现归因于驱动基因的二次突变和其他复杂因素。值得注意的是,对于不同类型的 KRAS 或 EGFR 突变的肿瘤,包括肿瘤中常见的 KRASG12D、KRASG13D 和 EGFRC797S 突变,目前尚缺乏获批的治疗策略[2]。此外,癌基因突变可能引发一连串的肿瘤微环境变化,最终导致肿瘤进展或对程序性死亡-1(PD-1)抗体疗法产生抗药性[3, 4]。SYHA1813是一种新型血管内皮生长因子受体(VEGFR)和集落刺激因子1受体(CSF1R)双重抑制剂,在临床前通过抑制血管生成和促进肿瘤免疫表现出强大的抗胶质瘤活性,并在一项正在进行的临床研究(ChiCTR2100045380)中显示出良好的疗效[5, 6]。我们首先研究了SYHA1813对含有KRASG12C突变(NCI-H358肺癌)、KRASG12D突变(PANC-1胰腺癌)和野生型KRAS(KRASWT)(HT-29结直肠癌)的细胞系衍生异种移植(CDX)肿瘤模型的作用。结果表明,在NCI-H358异种移植模型中,口服10毫克/千克剂量的SYHA1813可显著降低肿瘤生长,其疗效与美国食品药品管理局(FDA)批准的KRASG12C抑制剂索托拉西布(AMG510)相当(图1A)。SYHA1813治疗还导致PANC-1和HT-29异种移植模型中的肿瘤消退(图1B-C)。所有组均未观察到明显的体重下降(补充图 S1)。此外,考虑到耐药性的出现是 AMG510 面临的一个重大挑战,我们建立了 AMG510 的耐药模型(命名为 AMG510R)。我们发现,虽然与 NCI-H358 模型相比,AMG510 对 AMG510R 模型的疗效有所减弱,但 SYHA1813 仍能在相同剂量下抑制耐药肿瘤的生长(图 1D)。此外,SYHA1813还在两种患者来源异种移植(PDX)模型中进行了评估,包括胃肿瘤模型GC-1-005(KRASG13D)和结直肠肿瘤模型CRC-1-003(KRASWT)(图1E)。SYHA1813 在这些 PDX 模型中也表现出了强大的抗肿瘤活性(图 1F-G)。鉴于 SYHA1813 通过调节血管生成和巨噬细胞发挥抗肿瘤作用,我们进一步分析了 NCI-H358 和 HT-29 肿瘤组织中与血管生成、巨噬细胞和增殖相关的标记物的表达。免疫组化(IHC)结果显示,SYHA1813能显著降低血管生成标志物CD31、巨噬细胞标志物F4/80、M2型巨噬细胞标志物CD206和精氨酸酶-1(ARG1)以及肿瘤增殖标志物Ki67的表达(图1H和补充图S2)。总之,SYHA1813在一组基因和组织学异质性的KRAS突变肿瘤模型(包括对AMG510耐药的模型)中表现出强大的抗肿瘤活性。为了解决这个问题,我们首先采用了含有EGFRL858R/T790M突变的NCI-H1975模型,该模型对第一代表皮生长因子受体TKIs耐药,结果发现SYHA1813能显著抑制肿瘤的生长(图1I)。然后,我们评估了 SYHA1813 对携带 EGFRC797S 三重突变的肿瘤模型(PC-9-OR)的活性,该模型对第三代 EGFR TKIs 具有耐药性[7]。如图 1J 所示,美国 FDA 批准的第一种第三代 EGFR TKI--奥西替尼(AZD9291)即使剂量为 10 mg/kg,也无法抑制肿瘤生长。然而,我们观察到 SYHA1813 在 5 毫克/公斤和 10 毫克/公斤剂量下的肿瘤生长速度明显减慢(图 1J)。此外,我们还采用了奥希替尼耐药肿瘤(命名为 AZDR)[8],也观察到 SYHA1813 单药治疗后肿瘤生长速度明显下降(图 1K)。同样,在另一个对第三代表皮生长因子受体 TKI ASK120067 [8]耐药的模型(命名为 67R)中,SYHA1813 单药治疗也抑制了肿瘤生长(图 1L)。IHC 结果还显示,服用 SYHA1813 后,肿瘤组织中的血管生成标记物和巨噬细胞标记物减少(补充图 S3)。
{"title":"A novel strategy for treating oncogene-mutated tumors by targeting tumor microenvironment and synergistically enhancing anti-PD-1 immunotherapy","authors":"Yingqiang Liu,&nbsp;Linjiang Tong,&nbsp;Mengge Zhang,&nbsp;Qi Zhang,&nbsp;Qiupei Liu,&nbsp;Fang Feng,&nbsp;Yan Li,&nbsp;Mengzhen Lai,&nbsp;Haotian Tang,&nbsp;Yi Chen,&nbsp;Meiyu Geng,&nbsp;Wenhu Duan,&nbsp;Jian Ding,&nbsp;Hua Xie","doi":"10.1002/cac2.12521","DOIUrl":"10.1002/cac2.12521","url":null,"abstract":"<p>Oncogenes are critical factors in tumorigenesis of diverse cancer types and play essential roles in tumor immune escape. Mutations in Kirsten rat sarcoma viral oncogene homolog (<i>KRAS</i>) and epidermal growth factor receptor (<i>EGFR</i>) are among the most frequent gain-of-function alterations [<span>1</span>]. After many years of in-depth research, inhibitors targeting <i>EGFR</i> or <i>KRAS</i> mutations have been successfully developed, however, their clinical benefit is relatively limited, and they will inevitably encounter the challenge of drug resistance. The emergence of resistance is attributed to secondary mutations in driver genes and other complicated factors. It is worth noting that approved treatment strategies are currently lacking for tumors with different types of <i>KRAS</i> or <i>EGFR</i> mutations, including <i>KRAS<sup>G12D</sup></i>, <i>KRAS<sup>G13D</sup></i>, and <i>EGFR<sup>C797S</sup></i> mutations that are common in tumors [<span>2</span>]. Additionally, oncogene mutations could trigger a cascade of tumor microenvironment changes, ultimately resulting in tumor progression or resistance to programmed death-1 (PD-1) antibody therapy [<span>3, 4</span>]. SYHA1813, a novel vascular endothelial growth factor receptor (VEGFR) and colony-stimulating factor 1 receptor (CSF1R) dual inhibitor, exhibited potent preclinical anti-glioma activity by inhibiting angiogenesis and promoting tumor immunity and showed promising efficacy in an ongoing clinical study (ChiCTR2100045380) [<span>5, 6</span>]. Here, we determined SYHA1813's antitumor activity in tumor models bearing <i>KRAS</i> or <i>EGFR</i> mutations.</p><p>We first examined the effects of SYHA1813 against cell line-derived xenograft (CDX) tumor models containing <i>KRAS<sup>G12C</sup></i> mutation (NCI-H358 lung cancer), <i>KRAS<sup>G12D</sup></i> mutation (PANC-1 pancreatic cancer) and wild-type <i>KRAS</i> (<i>KRAS<sup>WT</sup></i>) (HT-29 colorectal cancer). The results demonstrated that oral administration of SYHA1813 at a dose of 10 mg/kg significantly reduced tumor growth in the NCI-H358 xenograft model, with comparable efficacy to the US Food and Drug Administration (FDA) approved KRAS<sup>G12C</sup> inhibitor sotorasib (AMG510) (Figure 1A). SYHA1813 treatment also resulted in tumor regression in PANC-1 and HT-29 xenograft models (Figure 1B-C). No significant body weight loss was observed in all groups (Supplementary Figure S1). Moreover, considering the emergence of drug resistance as a significant challenge of AMG510, we established a drug resistance model of AMG510 (designated as AMG510R). We found that although AMG510 exhibited attenuated efficacy against the AMG510R model compared to the NCI-H358 model, SYHA1813 could still suppress the growth of drug-resistant tumors at the same dose (Figure 1D). Furthermore, SYHA1813 was evaluated in two patient-derived xenograft (PDX) models, including gastric tumor model GC-1-005 (<i>KRAS<sup>G13D</sup></i>) and colorect","PeriodicalId":9495,"journal":{"name":"Cancer Communications","volume":null,"pages":null},"PeriodicalIF":16.2,"publicationDate":"2024-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/cac2.12521","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139711572","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Cancer Communications
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1