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Transcriptomic Heterogeneity of Human Mesenchymal Stem Cells Derived from Bone Marrow, Dental Pulp, Adipose Tissue, and Umbilical Cord. 来自骨髓、牙髓、脂肪组织和脐带的人间充质干细胞转录组异质性。
IF 1.6 4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-08-01 DOI: 10.1089/cell.2023.0019
Xiaoxiao Zhu, Xinchen Xu, Mengyuan Shen, Yingying Wang, Tao Zheng, Huitao Li, Xing Wang, Jian Meng

Compared with mesenchymal stem cells (MSCs) obtained from other tissue sources, those derived from umbilical cord (UC) tissue exhibit numerous advantages and vast potential for therapeutic applications. However, MSCs from different tissue sources are heterogeneous, and therefore, the therapeutic efficacy of UC-derived MSCs as a replacement for other tissue-derived MSCs needs to be studied. To better understand the distinctions between UC-derived MSCs and MSCs derived from other tissues, we conducted a transcriptome analysis of MSCs obtained from UC and three other tissues. Correlation analysis revealed the strongest correlation between UC-MSCs (UC-MSCs) and bone marrow-MSCs (BM-MSCs). Compared with UC-MSCs, the lower differentially expressed genes of BM-MSCs, dental pulp-MSCs (DP-MSCs), and adipose tissue-MSCs (AP-MSCs) were predominantly enriched in actin-related terms, while higher differentially expressed genes were predominantly enriched in immunological processes. We also analyzed the distribution of 34 frequently or highly expressed cell characterization molecules in BM-MSCs, DP-MSCs, AP-MSCs, and UC-MSCs. CD200 (FPKM >10) was only detected in UC-MSCs, while CD106 was detected in AD-MSCs and DP-MSCs (FPKM >10). The reliability of transcriptomic data analysis was verified by quantitative real-time PCR. Finally, we recommend the use of CD200, CD106, and other similar markers with unstable expression as benchmark molecules to monitor the proliferation and differentiation potential of MSCs. This study provides comprehensive insights into the heterogeneity between UC-MSCs and MSCs derived from other tissues, which can guide the therapeutic application of UC-MSCs.

与从其他组织来源获得的间充质干细胞(MSCs)相比,来自脐带(UC)组织的间充质干细胞(MSCs)具有许多优点和巨大的治疗应用潜力。然而,来自不同组织来源的间充质干细胞是异质性的,因此,uc来源的间充质干细胞替代其他组织来源的间充质干细胞的治疗效果需要研究。为了更好地理解UC来源的间充质干细胞和其他组织来源的间充质干细胞之间的区别,我们对UC和其他三种组织获得的间充质干细胞进行了转录组分析。相关性分析显示UC-MSCs (UC-MSCs)与骨髓间充质干细胞(BM-MSCs)相关性最强。与UC-MSCs相比,BM-MSCs、牙髓- mscs (DP-MSCs)和脂肪组织- mscs (AP-MSCs)的低差异表达基因主要富集于肌动蛋白相关方面,而高差异表达基因主要富集于免疫过程。我们还分析了34个频繁或高表达的细胞表征分子在BM-MSCs、DP-MSCs、AP-MSCs和UC-MSCs中的分布。CD200仅在UC-MSCs中检测到(FPKM >10),而CD106在AD-MSCs和DP-MSCs中检测到(FPKM >10)。通过实时荧光定量PCR验证转录组数据分析的可靠性。最后,我们推荐使用CD200、CD106和其他类似的不稳定表达标记作为基准分子来监测MSCs的增殖和分化潜能。本研究全面揭示了UC-MSCs与来源于其他组织的MSCs之间的异质性,为UC-MSCs的治疗应用提供指导。
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引用次数: 2
Cell Reprogramming Techniques: Contributions to Cancer Therapy. 细胞重编程技术:对癌症治疗的贡献。
IF 1.6 4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-08-01 DOI: 10.1089/cell.2023.0011
Tongtong Guo, Qi Wei

The reprogramming of terminally differentiated cells over the past few years has become important for induced pluripotent stem cells (iPSCs) in the field of regenerative medicine and disease drug modeling. At the same time, iPSCs have also played an important role in human cancer research. iPSCs derived from cancer patients can be used to simulate the early progression of cancer, for drug testing, and to study the molecular mechanism of cancer occurrence. In recent years, with the application of cellular immunotherapy in cancer therapy, patient-derived iPSC-induced immune cells (T, natural killer, and macrophage cells) solve the problem of immune rejection and have higher immunogenicity, which greatly improves the therapeutic efficiency of immune cell therapy. With the continuous progress of cancer differentiation therapy, iPSC technology can reprogram cancer cells to a more primitive pluripotent undifferentiated state, and successfully reverse cancer cells to a benign phenotype by changing the epigenetic inheritance of cancer cells. This article reviews the recent progress of cell reprogramming technology in human cancer research, focuses on the application of reprogramming technology in cancer immunotherapy and the problems solved, and summarizes the malignant phenotype changes of cancer cells in the process of reprogramming and subsequent differentiation.

近年来,终末分化细胞的重编程已成为诱导多能干细胞(iPSCs)在再生医学和疾病药物建模领域的重要研究方向。同时,iPSCs在人类癌症研究中也发挥了重要作用。来源于癌症患者的iPSCs可用于模拟癌症的早期进展,用于药物测试,以及研究癌症发生的分子机制。近年来,随着细胞免疫治疗在癌症治疗中的应用,患者源性ipsc诱导的免疫细胞(T细胞、自然杀伤细胞、巨噬细胞)解决了免疫排斥问题,具有更高的免疫原性,极大地提高了免疫细胞治疗的治疗效率。随着癌症分化治疗的不断进展,iPSC技术可以将癌细胞重编程为更原始的多能未分化状态,并通过改变癌细胞的表观遗传成功将癌细胞逆转为良性表型。本文综述了细胞重编程技术在人类癌症研究中的最新进展,重点介绍了重编程技术在癌症免疫治疗中的应用及解决的问题,并总结了癌细胞在重编程及随后分化过程中的恶性表型变化。
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引用次数: 0
Rosalind Franklin Society Proudly Announces the 2022 Award Recipient for Cellular Reprogramming. 罗莎琳德·富兰克林协会自豪地宣布了2022年细胞重编程奖获得者。
IF 1.6 4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-08-01 DOI: 10.1089/cell.2023.29097.rfs2022
Cristiana F Pires
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引用次数: 0
A Novel Method for Human Adipose-Derived Stem Cell Isolation and Cryopreservation. 一种分离和冷冻保存人脂肪干细胞的新方法
IF 1.6 4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-08-01 DOI: 10.1089/cell.2023.0017
Young-Cheol Lim, Jung-Il Jung, In-Kee Hong

Adipose-derived stem cells (ADSCs) are isolated from abundant adipose tissue and have the capacity to differentiate into multiple cell lineages. ADSCs have raised big interest in therapeutic applications in regenerative medicine and demonstrated to fulfill the criteria for a successful cell therapy. There are several methods for isolation of ADSCs from adipose tissue and cryopreservation of ADSCs. Here, novel methods for the isolation and cryopreservation of ADSCs are presented and focused. Microscopic pieces of adipose tissue were placed on transwell inserts, and the ADSCs were induced to migrate to the lower wells for 1 week. We compared the properties of our ADSCs with those isolated by enzymatic digestion and enzyme-free method of culture plate, and our ADSCs were found to be more stable and healthier. In addition, we proposed a novel cryoprotectant solution (FNCP) containing pectin and L-alanine, which was compared with standard cryoprotectant solution. Overall, our methods proved more useful for ADSCs isolation than other methods and did not require consideration of "minimal manipulation" by the U.S. Food and Drug Administration (FDA). Furthermore, our FNCP did not contain dimethyl sulfoxide and fetal bovine serum, therefore stable storage is possible in xeno-free and animal-free cryopreservation solutions.

脂肪源性干细胞(ADSCs)是从丰富的脂肪组织中分离出来的,具有分化成多种细胞系的能力。ADSCs已经引起了人们对再生医学治疗应用的极大兴趣,并被证明能够满足成功细胞治疗的标准。从脂肪组织中分离ADSCs和冷冻保存ADSCs的方法有多种。本文重点介绍了分离和冷冻保存ADSCs的新方法。将显微脂肪组织片置于transwell插入物上,诱导ADSCs向下孔迁移1周。我们将我们的ADSCs与酶消化法和无酶培养板法分离的ADSCs的性能进行了比较,发现我们的ADSCs更稳定,更健康。此外,我们提出了一种含有果胶和l -丙氨酸的新型冷冻保护剂溶液(FNCP),并与标准冷冻保护剂溶液进行了比较。总的来说,我们的方法被证明对ADSCs的分离比其他方法更有用,并且不需要考虑美国食品和药物管理局(FDA)的“最小操作”。此外,我们的FNCP不含二甲亚砜和胎牛血清,因此可以在无xeno和无动物的冷冻保存溶液中稳定保存。
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引用次数: 0
Cell Transdifferentiation: A Challenging Strategy with Great Potential. 细胞转分化:一个具有巨大潜力的挑战策略。
IF 1.6 4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-08-01 DOI: 10.1089/cell.2023.0015
Fuping Wang, Runting Li, Limeng Zhang, Xiaoning Nie, Linqing Wang, Longxin Chen

With the discovery and development of somatic cell nuclear transfer, cell fusion, and induced pluripotent stem cells, cell transdifferentiation research has presented unique advantages and stimulated a heated discussion worldwide. Cell transdifferentiation is a phenomenon by which a cell changes its lineage and acquires the phenotype of other cell types when exposed to certain conditions. Indeed, many adult stem cells and differentiated cells were reported to change their phenotype and transform into other lineages. This article reviews the differentiation of stem cells and classification of transdifferentiation, as well as the advantages, challenges, and prospects of cell transdifferentiation. This review discusses new research directions and the main challenges in the use of transdifferentiation in human cells and molecular replacement therapy. Overall, such knowledge is expected to provide a deep understanding of cell fate and regulation, which can change through differentiation, dedifferentiation, and transdifferentiation, with multiple applications.

随着体细胞核移植、细胞融合和诱导多能干细胞的发现和发展,细胞转分化研究呈现出独特的优势,在世界范围内引起了热烈的讨论。细胞转分化是细胞在一定条件下改变其谱系并获得其他细胞类型表型的一种现象。事实上,据报道,许多成体干细胞和分化细胞改变其表型并转化为其他谱系。本文综述了干细胞的分化和转分化的分类,以及细胞转分化的优势、挑战和前景。本文综述了转分化在人类细胞和分子替代治疗中的新研究方向和面临的主要挑战。总的来说,这些知识有望提供对细胞命运和调控的深刻理解,细胞命运和调控可以通过分化、去分化和转分化发生变化,并具有多种应用。
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引用次数: 0
A Safer Path to Cellular Rejuvenation: Endogenous Oct4 Activation via CRISPR/dCas9 in Progeria Mouse Models. 细胞年轻化的更安全途径:在早衰小鼠模型中通过CRISPR/dCas9内源性Oct4激活
IF 1.6 4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-08-01 DOI: 10.1089/cell.2023.0057
Di Hu, Enora Le Borgne, Rico Meinl

A recent study in Aging Cell showed that transcriptional activation of endogenous Oct4 using the CRISPR/dCas9 activator system is sufficient for cellular rejuvenation and extending the lifespan of a progeria mouse model. Although transient expression of reprogramming factors Oct4, Sox2, Klf4, and c-Myc (OSKM) has been shown to ameliorate age-related phenotypes in vivo, oncogenic risk, for example, from c-Myc, has raised safety concerns for its use in therapeutics. The authors demonstrated that transient activation of endogenous Oct4 expression restored age-related epigenetic patterns, suppressed expression of mutant progerin, and reduced vascular pathological features associated with the disease. At the same time, the transient Oct4 overexpression resulted in lower incidence of cancer transformation compared with constituent OSKM overexpression. Successful activation of endogenous Oct4 by CRISPR/dCas9 paves the way for novel therapeutic approaches for the treatment of progeria and age-related diseases, with potential implications for the broader field of cellular reprogramming-based rejuvenation.

《Aging Cell》杂志最近的一项研究表明,使用CRISPR/dCas9激活器系统对内源性Oct4的转录激活足以使细胞年轻化并延长早衰小鼠模型的寿命。虽然重编程因子Oct4, Sox2, Klf4和c-Myc (OSKM)的短暂表达已被证明可以改善体内年龄相关表型,但致癌风险,例如c-Myc,已经引起了其在治疗中使用的安全性问题。作者证明,内源性Oct4表达的短暂激活恢复了与年龄相关的表观遗传模式,抑制了突变的progerin的表达,并减少了与该疾病相关的血管病理特征。同时,与OSKM组分过表达相比,Oct4过表达导致肿瘤转化的发生率较低。CRISPR/dCas9成功激活内源性Oct4为治疗早衰和年龄相关疾病开辟了新的治疗方法,对更广泛的基于细胞重编程的返老还童领域具有潜在的影响。
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引用次数: 0
The Emerging Role of B1 SINE in Pluripotent Reprogramming. B1 SINE 在多能性重编程中的新作用。
IF 1.6 4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-06-01 Epub Date: 2023-05-08 DOI: 10.1089/cell.2023.0037
Jere Weltner, Ras Trokovic

By screening a CRISPR knockout library for mouse pluripotent reprogramming roadblock genes, Kaemena et al. identify the KRAB-ZFP factor Zfp266 as a suppressor of efficient reprogramming. Furthermore, by analyzing DNA binding and chromatin openness, the authors found that ZFP266 has a role in suppressing reprogramming by targeting the B1 SINE sequences for silencing.

通过筛选小鼠多能重编程路障基因的CRISPR基因敲除文库,Kaemena等人发现KRAB-ZFP因子Zfp266是高效重编程的抑制因子。此外,通过分析 DNA 结合和染色质开放性,作者发现 ZFP266 可通过靶向 B1 SINE 序列沉默来抑制重编程。
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引用次数: 0
Functions of Key Enzymes of Glycolytic Metabolism in Tumor Microenvironment. 肿瘤微环境中糖酵解代谢关键酶的功能
IF 1.6 4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-06-01 Epub Date: 2023-05-12 DOI: 10.1089/cell.2023.0010
Wenxin Xu, Jialei Weng, Minghao Xu, Qiang Zhou, Shaoqing Liu, Zhiqiu Hu, Ning Ren, Chenhao Zhou, Yinghao Shen

The tumor microenvironment (TME) plays a crucial role in tumor initiation, growth and metastasis. Metabolic enzymes involved in tumor glycolytic reprogramming, including hexokinase, pyruvate kinase, and lactate dehydrogenase, not only play key roles in tumorigenesis and maintaining tumor cell survival, but also take part in the modulation of the TME. Many studies have been devoted to the role of key glycolytic enzymes in the TME over the past decades. We summarize the studies on the role of glycolytic enzymes in the TME of these years and found that glycolytic enzymes remodel the TME primarily through regulating immune escape, angiogenesis, and affecting stromal cells and exosomes. Notably, abnormal tumor vascular system, peritumoral stromal cells, and tumor immunosuppressive microenvironment are important contributors to the failure of antitumor therapy. Therefore, we discuss the mechanisms of regulation by key glycolytic enzymes that may contribute to a promising biomarker for therapeutic intervention. We argue that targeting key glycolytic enzymes in combination with antiprogrammed cell death ligand 1 or antivascular endothelial growth factor could emerge as the more integrated and comprehensive antitumor treatment strategy.

肿瘤微环境(TME)在肿瘤的发生、生长和转移过程中起着至关重要的作用。参与肿瘤糖酵解重编程的代谢酶,包括己糖激酶、丙酮酸激酶和乳酸脱氢酶,不仅在肿瘤发生和维持肿瘤细胞存活方面发挥着关键作用,而且还参与了对肿瘤微环境的调控。在过去的几十年中,许多研究都致力于探讨关键糖酵解酶在 TME 中的作用。我们总结了这些年来有关糖酵解酶在肿瘤组织生长环境中作用的研究,发现糖酵解酶主要通过调节免疫逃逸、血管生成以及影响基质细胞和外泌体来重塑肿瘤组织生长环境。值得注意的是,异常的肿瘤血管系统、瘤周基质细胞和肿瘤免疫抑制微环境是导致抗肿瘤治疗失败的重要原因。因此,我们讨论了关键糖酵解酶的调控机制,这可能有助于为治疗干预提供有前景的生物标志物。我们认为,靶向关键糖酵解酶与抗程序性细胞死亡配体 1 或抗血管内皮生长因子相结合,可能成为更综合、更全面的抗肿瘤治疗策略。
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引用次数: 0
Ameliorative Effects of Extracellular Vesicles Derived from Mesenchymal Stem Cells on Apoptosis and Differentiation of Osteoblasts Treated with CoCl2. 间充质干细胞衍生的细胞外囊泡对受 CoCl2 处理的成骨细胞凋亡和分化的改善作用
IF 1.2 4区 医学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2023-06-01 Epub Date: 2023-05-15 DOI: 10.1089/cell.2023.0001
Qicheng Li, Wei Zhang, Jin Deng, Qiuya Li, Xiaoyang Fu, Yuhui Kou, Na Han

Severe osteoporotic fracture occurring in sites with inadequate blood supply can cause irreversible damage to cells, particularly osteoblasts, with current drug and surgical interventions exhibiting limitations for elderly individuals. As participants mediating intercellular communication, extracellular vesicles (EVs) are rarely reported to play functional roles in osteoblasts under hypoxia. Our study mainly investigated the effects of bone marrow mesenchymal stem cells-derived EVs (BMSCs-EVs) on apoptosis and differentiation of osteoblasts treated with CoCl2. Primary rat BMSCs and osteoblasts were extracted as required for the following experiments. Cell counting kit 8 assay was used to explore the concentration of CoCl2 for treating osteoblasts, and we found that 100 μM CoCl2 was appropriate to treat osteoblasts for 48 hours. The analysis of flow cytometer showed that CoCl2-treated osteoblasts apoptosis can be ameliorated when cocultured with BMSCs-EVs. Further findings revealed that reactive oxygen species (ROS) was related to CoCl2-induced apoptosis. In addition, our results demonstrated that EVs exerted an important role in increasing expression levels of ALP, BMP-2, OCN, and OSTERIX under hypoxia. Similarly, the functional effects of BMSCs-EVs were observed on the osteoblasts mineralization. In summary, these findings provide insight that BMSCs-EVs might decrease the effect of CoCl2-induced apoptosis through inhibiting ROS, and promote osteogenic differentiation under hypoxia.

在血液供应不足的部位发生的严重骨质疏松性骨折会对细胞,尤其是成骨细胞造成不可逆的损伤,而目前的药物和手术干预措施对老年人来说存在局限性。作为介导细胞间通讯的参与者,细胞外囊泡(EVs)在缺氧条件下对成骨细胞发挥功能性作用的报道很少。我们的研究主要探讨了骨髓间充质干细胞衍生的EVs(BMSCs-EVs)对CoCl2处理的成骨细胞凋亡和分化的影响。根据需要提取原代大鼠骨髓间充质干细胞和成骨细胞用于以下实验。使用细胞计数试剂盒8检测CoCl2处理成骨细胞的浓度,发现100 μM CoCl2处理成骨细胞48小时是合适的。流式细胞仪分析表明,CoCl2 处理的成骨细胞与 BMSCs-EVs 共同培养后,凋亡情况有所改善。进一步的研究发现,活性氧(ROS)与CoCl2诱导的细胞凋亡有关。此外,我们的研究结果表明,在缺氧条件下,EVs 在提高 ALP、BMP-2、OCN 和 OSTERIX 的表达水平方面发挥了重要作用。同样,我们也观察到了 BMSCs-EVs 对成骨细胞矿化的功能性影响。综上所述,这些研究结果表明,BMSCs-EVs 可通过抑制 ROS 减少 CoCl2 诱导的细胞凋亡,并促进缺氧条件下的成骨分化。
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引用次数: 0
Production of MSTN Gene-Edited Embryos of Buffalo Using the CRISPR/Cas9 System and SCNT. 利用 CRISPR/Cas9 系统和 SCNT 生产水牛 MSTN 基因编辑胚胎。
IF 1.6 4区 医学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-06-01 Epub Date: 2023-04-11 DOI: 10.1089/cell.2023.0003
Seema Dua, Sonu Bansal, Devika Gautam, Bosco Jose, Priyanka Singh, Manoj Kumar Singh, Sachinandan De, Dharmendra Kumar, Prem Singh Yadav, Wilfried Kues, Naresh L Selokar

The clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 system and somatic cell nuclear transfer (SCNT) have been used to produce genome-edited farm animal species for improved production and health traits; however, these tools are rarely used in the buffalo and can play a pivotal role in milk and meat production in tropical and subtropical countries. In this study, we aimed to produce myostatin (MSTN) gene-edited embryos of the Murrah buffalo using the CRISPR/Cas9 system and SCNT. For this, fibroblast cells were electroporated with sgRNAs carrying all-in-one CRISPR/Cas9 plasmids targeting the first exon of the MSTN gene. Following puromycin selection, single-cell clonal populations were established and screened using the TA cloning and Sanger sequencing methods. Of eight single-cell clonal populations, one with a monoallelic and another with a biallelic heterozygous gene editing event were identified. These two gene-edited clonal cell populations were successfully used to produce blastocyst-stage embryos using the handmade cloning method. This work establishes the technical foundation for generation of genome-edited cloned embryos in the buffalo.

聚类规则间隔短回文重复序列(CRISPR)/Cas9 系统和体细胞核移植(SCNT)已被用于生产基因组编辑的农场动物物种,以改善生产和健康性状;然而,这些工具很少用于水牛,而水牛在热带和亚热带国家的牛奶和肉类生产中可发挥关键作用。在这项研究中,我们的目标是利用 CRISPR/Cas9 系统和 SCNT 技术生产肌生长抑素(MSTN)基因编辑的穆拉水牛胚胎。为此,我们在成纤维细胞中电穿孔了携带靶向 MSTN 基因第一外显子的一体化 CRISPR/Cas9 质粒的 sgRNA。经过嘌呤霉素筛选后,建立了单细胞克隆群体,并使用TA克隆和Sanger测序方法进行了筛选。在八个单细胞克隆群体中,发现了一个单等位基因和一个双等位基因杂合基因编辑事件。这两个经过基因编辑的克隆细胞群被成功用于用手工克隆方法生产囊胚期胚胎。这项工作为水牛基因组编辑克隆胚胎的产生奠定了技术基础。
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引用次数: 0
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