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Ab Initio Calculation of Energy Gap and Optical Gap of Organic Semiconductors PTCDA and PDI 有机半导体PTCDA和PDI的能隙和光隙的从头计算。
IF 2.2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-02-10 DOI: 10.1002/cphc.202500481
Chieh-Min Hsieh, Tanja Link, Michael Maas, Katharina Koschek, Tim Neudecker

We applied ab initio methods, including the GW approximation, the Koopmans functionals, range-separated hybrid functionals, and time-dependent density functional theory (TDDFT) to investigate the energy gap and optical gap of perylene-3,4,9,10-tetracarboxylic dianhydride (PTCDA) and perylene diimide (PDI) derivatives. A detailed comparison of our calculated results from all the methods with experimental values was made, with particular focus on the properties of single molecules versus molecular crystals. Single-molecule TDDFT with the polarizable continuum model (PCM) shows reasonable accuracy for the energy and optical gaps in molecular crystals but is less accurate in predicting ionization energy (IE) and electron affinity (EA) compared to GW calculations. These findings provide guidance for selecting reliable computational approaches for evaluating key electronic and optical properties of organic semiconductor systems.

本文应用从头算方法,包括GW近似、Koopmans泛函、距离分离杂化泛函和时变密度泛函理论(TDDFT)研究了苝-3,4,9,10-四羧基二酐(PTCDA)和苝二酰亚胺(PDI)衍生物的能隙和光隙。将所有方法的计算结果与实验值进行了详细的比较,特别关注了单分子与分子晶体的性质。单分子TDDFT与极化连续模型(PCM)对分子晶体的能量和光间隙具有合理的准确性,但在预测电离能(IE)和电子亲和能(EA)方面的准确性低于GW计算。这些发现为选择可靠的计算方法来评估有机半导体系统的关键电子和光学特性提供了指导。
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引用次数: 0
Mechanistic Insights Into CO2 Activation via Phosphorus–Boron Frustrated Lewis Pairs: A Density Functional Theory Study 通过磷-硼受挫刘易斯对对CO2活化的机制见解:密度泛函理论研究。
IF 2.2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-02-10 DOI: 10.1002/cphc.202500897
Swapan Sinha, Santanab Giri

This study investigates the reactivity of a novel intermolecular phosphine/borane (P/B) frustrated Lewis pair in the activation of CO2 via a push-pull mechanism. Detailed computational analyses, particularly intrinsic reaction coordinate calculations, reveal a single-step and concerted mechanism for CO2 activation. The reaction is characterized as exergonic, with notable efficiency in bromobenzene solvent. Furthermore, natural bond orbital analysis provides critical insights into the electron transfer processes, elucidating the roles of key donor–acceptor interactions in facilitating the reaction. These findings enhance the understanding of frustrated Lewis pair-mediated CO2 activation and highlight the potential of this system for catalytic applications.

本文研究了一种新型的分子间膦/硼烷(P/B)受挫Lewis对通过推拉机制在CO2活化中的反应性。详细的计算分析,特别是本构反应坐标计算,揭示了CO2活化的单步协调机制。该反应在溴苯溶剂中具有显着的效率。此外,自然键轨道分析为电子转移过程提供了重要的见解,阐明了关键的供体-受体相互作用在促进反应中的作用。这些发现增强了对受挫Lewis对介导的CO2活化的理解,并突出了该系统在催化应用方面的潜力。
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引用次数: 0
Coupling Aqueous Phase Chemical Actinometry with EPR Spectroscopy: An Approach for Probing Photochemical Processes at the Air–Sea Interface 耦合水相化学光光度法与EPR光谱法:一种探测海气界面光化学过程的方法。
IF 2.2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-02-10 DOI: 10.1002/cphc.202500734
Daniele Scheres Firak, Thomas Schaefer, Bochao Yang, Olenka Jibaja Valderrama, Manuela van Pinxteren, Hartmut Herrmann

Coupling investigations of the photochemistry of ambient samples with the detection of photoproduced radicals is a field of ongoing interest. Herein, we investigated the use of chemical actinometers to account for the photon flux in in situ electron paramagnetic resonance (EPR) spectroscopy experiments (IEPR) and correct it for solar light exposure. The developed method is based on the production of singlet oxygen (1O2) and its detection in spin-trapping with TEMP-OH in the photosensitization of Protoporphyrin IX (PPIX) and rose bengal (RB). Similar IEPR values were achieved in both PPIX and RB systems, with values ranging from (1.3 ± 0.2) × 10−8IEPR ≤ (1.6 ± 0.3) × 10−8 mol photons L−1 s−1. TEMP-OH protonation was shown to interfere with the results at pH < 2. The aggregation effects of PPIX were investigated, and solutions were shown to be stabilized by the presence of TEMP-OH. The photochemical activity of the sea-surface microlayer (SML) samples was subsequently probed in in situ EPR experiments for the first time and corrected for the equivalent solar photochemical activity. The average results of the sunlight-induced oxidant formation rate were (3.8 ± 0.5) 10−8 M s−1, demonstrating the pronounced photochemical activity present in SML samples.

环境样品的光化学与检测光产生的自由基的耦合研究是一个持续的兴趣领域。本文研究了在原位电子顺磁共振(EPR)光谱学实验(IEPR)中使用化学光照度计计算光子通量的方法,并根据太阳光照对其进行校正。该方法是基于单线态氧(1O2)的产生和在自旋捕获中用温度- oh检测原卟啉IX (PPIX)和玫瑰红(RB)的光敏反应。PPIX和RB系统的IEPR值相似,值范围为(1.3±0.2)× 10-8≤IEPR≤(1.6±0.3)× 10-8 mol光子L-1 s-1。结果显示,在pH -8 M s-1时,温度- oh质子化会干扰结果,表明SML样品中存在明显的光化学活性。
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引用次数: 0
Robust Control of Enantioselective State Transfer in Chiral Molecules 手性分子中对映选择性状态转移的鲁棒控制。
IF 2.2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-02-10 DOI: 10.1002/cphc.202500705
Qian-Qian Hong, Xin-Jiao Song, Lei Xu, Chuan-Cun Shu

A robust coherent control strategy for enantioselective excitation in chiral molecules is presented. This approach employs a cyclic three-state rotational manifold, driven by three linearly polarized microwave fields, enabling analytical determination of the amplitude and phase requirements for enantioselective state transfer. To further enhance resilience against pulse-area errors, a composite pulse is introduced at a critical stage of the excitation process. This composite pulse minimizes pulse-area errors while maintaining enantioselectivity by precisely optimizing the subpulses’ phases. As a demonstration, the scheme is applied to cyclohexylmethanol, a model chiral molecule. Numerical simulations reveal that the tailored microwave fields reliably steer the two enantiomers into distinct target states, and that the composite pulse markedly improves robustness. Importantly, the population of the enantiomer-specific target state remains above 0.99 even for pulse-area deviations of up to ±30%, representing a substantial improvement over single pulse protocols. These results highlight the potential of this method to achieve high fidelity enantioselective control, even in the presence of practical uncertainties in the control field.

提出了一种用于手性分子对映选择性激发的鲁棒相干控制策略。该方法采用循环三态旋转流形,由三个线性极化微波场驱动,能够分析确定对映选择性状态转移的幅度和相位要求。为了进一步增强抗脉冲面积误差的弹性,在激励过程的关键阶段引入复合脉冲。该复合脉冲通过精确优化子脉冲的相位使脉冲面积误差最小化,同时保持对映体选择性。将该方法应用于典型手性分子环己基甲醇中进行了验证。数值模拟结果表明,定制的微波场可以可靠地将两种对映体引导到不同的目标态,并且复合脉冲显著提高了鲁棒性。重要的是,即使脉冲面积偏差高达±30%,对映体特异性靶态的总体仍保持在0.99以上,这比单脉冲方案有了实质性的改进。这些结果突出了该方法实现高保真对映选择控制的潜力,即使在控制领域存在实际的不确定性。
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引用次数: 0
Comparison of Adsorption Behaviour of Activated Carbons From Low-Rank Coals for Rhodamine B 低阶煤活性炭对罗丹明B吸附性能的比较。
IF 2.2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-01-30 DOI: 10.1002/cphc.202500493
Aleksandra Bazan-Wozniak

In this study, six activated carbons were synthesised using low-rank coal from Labin and Spitsbergen through single- and two-step KOH activation methods. The materials were evaluated for their ability to adsorb rhodamine B from aqueous solutions. The method of activation and impregnation ratio significantly affected the structural and sorption properties of the carbons. BET surface areas ranged from 602 to 855 m2/g. Surface functional groups varied depending on the precursor used. Adsorption experiments explored the effects of initial dye concentration, contact time, adsorbent mass, shaking speed and pH. Kinetic and isotherm models were applied to understand the adsorption mechanism. The linear Langmuir isotherm best fit the data, indicating uniform adsorption sites, while the process followed a pseudo-second-order kinetic model. Maximum adsorption capacities ranged from 100 to 294 mg/g. One adsorbent demonstrated excellent reusability, achieving up to 90% desorption efficiency after three cycles. These results highlight the material's strong potential for removing organic pollutants from water.

本研究以拉宾和斯匹次卑尔根低阶煤为原料,通过单步和两步KOH活化法合成了6种活性炭。评价了材料对水溶液中罗丹明B的吸附能力。活化方法和浸渍比对炭的结构和吸附性能有显著影响。BET表面积范围为602 ~ 855 m2/g。表面官能团的变化取决于所使用的前体。吸附实验探讨了初始染料浓度、接触时间、吸附剂质量、摇动速度和ph对吸附的影响,并应用动力学模型和等温模型研究了吸附机理。线性Langmuir等温线最符合数据,表明吸附位置均匀,而过程遵循伪二级动力学模型。最大吸附量为100 ~ 294 mg/g。一种吸附剂表现出优异的可重复使用性,在三个循环后达到高达90%的脱附效率。这些结果突出了这种材料在去除水中有机污染物方面的强大潜力。
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引用次数: 0
Optical Properties of 1D Plasmonic Polymers 一维等离子体聚合物的光学性质。
IF 2.2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-01-30 DOI: 10.1002/cphc.202500862
Sudip Kumar Pal, Debarun Sen, Dorothy Bardhan, Prithish Halder, Sujit Kumar Ghosh

The precise positioning and manipulation of individual nanoclusters in ordered arrangements are essential prerequisites for both comprehensive understanding and mathematical formulation to generalize the intrinsic optical characteristics for the advent of nanoscale applications. In analogy with our long-standing understanding of molecular polymers, linear chains of metallic nanostructures have been coined as plasmonic polymers, where the individual particles can be considered as the monomeric building units. The possibility of plasmonic waveguiding in these well-defined strongly coupled plasmonic nanostructures has motivated their investigation as prototypical model systems to fulfill the modern demand of applications in photonics miniaturized at the nanoscale dimensions. 1D chain-like assemblies of nanostructures, because of their high symmetry, represent particular spatial arrangements for propagating surface plasmon polaritons that can venture directed energy transfer along the chain and to unravel short- and long-range electromagnetic coupling mechanisms in these oriented assemblies. The optical properties of these plasmonic polymers are dependent upon the structural characteristics, such as the aggregation number, interparticle distances, and mutual orientations that explicitly correlate with the degree of polymerization, bond lengths, and bond angles, respectively, in these lattice architectures. Moreover, the morphological characteristics, such as size, and geometry of the individual building blocks, are of paramount significance to the critical condensation of the intriguing optical features in these polymeric configurations. The cumulative effect of all these intrinsic physical observables associated with the polymeric configurations can reckon the complete story towards the observed plasmonic properties. As to the first initiative to distill this complex relationship, a theoretical formulation has been devised in simple intuitive terminologies to correlate the chain length dependence on the plasmonic characteristics and electric field distribution patterns in 1D aggregation of size-selective gold nanostructures. The complementarity of theoretical, experimental, and numerical simulation approaches has been adopted in bridging the interrelation between the associated physical parameters and optical characteristics of the periodic assemblies with varying chain lengths comprised of size-selective gold nanoparticles. The unique ability of plasmonic waveguiding and coherent exchange of near electric fields along these 1D chain-like assemblies can endow newer perspectives towards their potential applications in light-trapping in photovoltaic devices, nanoscale photonics, optical circuitry, chemical and biological sensing, and surface enhanced spectroscopies.

精确定位和操纵有序排列的单个纳米团簇是全面理解和数学公式概括纳米级应用到来的内在光学特性的必要先决条件。与我们长期以来对分子聚合物的理解类似,金属纳米结构的线性链被创造为等离子体聚合物,其中单个粒子可以被认为是单体建筑单元。在这些定义良好的强耦合等离子体纳米结构中进行等离子体波导的可能性激发了它们作为原型模型系统的研究,以满足在纳米尺度上微型化光子学应用的现代需求。一维链状纳米结构组件,由于其高度对称性,代表了传播表面等离子激元的特定空间安排,可以沿着链进行定向能量转移,并在这些定向组件中解开短期和远程电磁耦合机制。这些等离子体聚合物的光学性质取决于其结构特征,如聚集数、粒子间距离和相互取向,这些结构特征分别与这些晶格结构中的聚合程度、键长和键角明确相关。此外,形态特征,如单个构建块的大小和几何形状,对于这些聚合物构型中有趣的光学特征的临界凝聚具有至关重要的意义。所有这些与聚合物构型相关的内在物理观测的累积效应可以计算出观测到的等离子体性质的完整故事。作为提炼这种复杂关系的第一个倡议,用简单直观的术语设计了一个理论公式,将链长度依赖于尺寸选择性金纳米结构一维聚集中的等离子体特性和电场分布模式联系起来。采用理论、实验和数值模拟方法的互补性,架起了由尺寸选择性金纳米颗粒组成的不同链长周期性组装体的相关物理参数和光学特性之间的相互关系。等离子体波导的独特能力和沿着这些一维链状组件的近电场相干交换可以为它们在光电器件、纳米级光子学、光学电路、化学和生物传感以及表面增强光谱中的潜在应用提供新的视角。
{"title":"Optical Properties of 1D Plasmonic Polymers","authors":"Sudip Kumar Pal,&nbsp;Debarun Sen,&nbsp;Dorothy Bardhan,&nbsp;Prithish Halder,&nbsp;Sujit Kumar Ghosh","doi":"10.1002/cphc.202500862","DOIUrl":"10.1002/cphc.202500862","url":null,"abstract":"<p>The precise positioning and manipulation of individual nanoclusters in ordered arrangements are essential prerequisites for both comprehensive understanding and mathematical formulation to generalize the intrinsic optical characteristics for the advent of nanoscale applications. In analogy with our long-standing understanding of molecular polymers, linear chains of metallic nanostructures have been coined as plasmonic polymers, where the individual particles can be considered as the monomeric building units. The possibility of plasmonic waveguiding in these well-defined strongly coupled plasmonic nanostructures has motivated their investigation as prototypical model systems to fulfill the modern demand of applications in photonics miniaturized at the nanoscale dimensions. 1D chain-like assemblies of nanostructures, because of their high symmetry, represent particular spatial arrangements for propagating surface plasmon polaritons that can venture directed energy transfer along the chain and to unravel short- and long-range electromagnetic coupling mechanisms in these oriented assemblies. The optical properties of these plasmonic polymers are dependent upon the structural characteristics, such as the aggregation number, interparticle distances, and mutual orientations that explicitly correlate with the degree of polymerization, bond lengths, and bond angles, respectively, in these lattice architectures. Moreover, the morphological characteristics, such as size, and geometry of the individual building blocks, are of paramount significance to the critical condensation of the intriguing optical features in these polymeric configurations. The cumulative effect of all these intrinsic physical observables associated with the polymeric configurations can reckon the complete story towards the observed plasmonic properties. As to the first initiative to distill this complex relationship, a theoretical formulation has been devised in simple intuitive terminologies to correlate the chain length dependence on the plasmonic characteristics and electric field distribution patterns in 1D aggregation of size-selective gold nanostructures. The complementarity of theoretical, experimental, and numerical simulation approaches has been adopted in bridging the interrelation between the associated physical parameters and optical characteristics of the periodic assemblies with varying chain lengths comprised of size-selective gold nanoparticles. The unique ability of plasmonic waveguiding and coherent exchange of near electric fields along these 1D chain-like assemblies can endow newer perspectives towards their potential applications in light-trapping in photovoltaic devices, nanoscale photonics, optical circuitry, chemical and biological sensing, and surface enhanced spectroscopies.</p>","PeriodicalId":9819,"journal":{"name":"Chemphyschem","volume":"27 2","pages":""},"PeriodicalIF":2.2,"publicationDate":"2026-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146084038","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unraveling Phase Stability and Distortion Mechanisms in RbGeX3 (X = I, Br, Cl) Perovskites via First-Principles Calculations 基于第一性原理计算的RbGeX3 (X = I, Br, Cl)钙钛矿解旋相稳定性和畸变机理
IF 2.2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-01-30 DOI: 10.1002/cphc.202500753
Haiyan Li, Fei Yuan, Yujia Gao, Jian Ma, Jingcheng Deng, Tingting Shi, Weiguang Xie

In this study, first-principles calculations were employed to systematically explore the stability and structural evolution of all-inorganic lead-free perovskites RbGeX3 (X = I, Br, Cl) in three optically active phases: Pmm, R3m, and Pna21. Total energy and phonon spectra indicate that Pna21 is the most stable phase, followed by R3m and Pmm. Ab initio molecular dynamics (AIMD) simulations at 300 and 500 K further confirm the thermal robustness of RbGeX3. The distortion parameters (D, σ2, ψ) indicate that the R3m and Pna21 phases exhibit varying degrees of symmetry breaking compared to the Pmm phase. Analysis of the soft phonon modes reveals that instability in Pmm originates from off-center displacements of Ge atoms coupled with halide vibrations, whereas in R3m it is driven by X-site-induced tilting of GeX6 octahedra. After AIMD simulations, the structures of both Pmm and R3m exhibit significant octahedral tilting, while the Pna21 phase shows minimal structural change, indicating greater thermal robustness. Finally, band structure calculations using the Heyd–Scuseria–Ernzerhof hybrid functional show a progressive bandgap increase with decreasing symmetry, offering theoretical guidance for the development of efficient lead-free perovskites.

在本研究中,采用第一性原理计算系统地探索了全无机无铅钙钛矿RbGeX3 (X = I, Br, Cl)在三种光活性相Pm 3¯$begin{equation*} overline{3} end{equation*}$ m, R3m和Pna21中的稳定性和结构演变。总能量和声子谱表明Pna21是最稳定的相,其次是R3m和Pm 3¯$begin{equation*} overline{3} end{equation*}$ m。300和500 K的从头算分子动力学(AIMD)模拟进一步证实了RbGeX3的热鲁稳性。变形参数(D, σ2, ψ)表明,与Pm 3¯$begin{equation*} overline{3} end{equation*}$ m相相比,R3m和Pna21相出现了不同程度的对称性破缺。软声子模式分析表明,Pm 3¯$begin{equation*} overline{3} end{equation*}$ m中的不稳定性源于Ge原子的偏心位移和卤化物振动,而R3m中的不稳定性是由x位诱导的GeX6八面体倾斜驱动的。经过AIMD模拟,Pm 3¯$begin{equation*} overline{3} end{equation*}$ m和R3m的结构都表现出明显的八面体倾斜,而Pna21相的结构变化最小,表明其具有更强的热鲁棒性。最后,利用Heyd-Scuseria-Ernzerhof杂化泛函数进行的能带结构计算表明,随着对称性的降低,带隙逐渐增大,这为高效无铅钙钛矿的开发提供了理论指导。
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引用次数: 0
Nuclear Magnetic Resonance Studies of Ionic Coordination and Interactions in NaF-LaF3 and LiF-LaF3 Mixed Salts NaF-LaF3和LiF-LaF3混合盐离子配位和相互作用的核磁共振研究。
IF 2.2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-01-30 DOI: 10.1002/cphc.202500741
Jianchao Sun, Jin Chai, Junheng Yingsu, Miao Shen, Xiaobin Fu, Yuan Qian

Heavy-metal fluoride (HMF) glasses exhibit a combination of broad infrared transparency, low phonon energy, and potential fluoride-ion conductivity, rendering them promising candidates for optical and electrochemical applications. However, the atomic-scale environment of La3+ ions, which governs these properties, remains inadequately characterized. In this work, we systematically examine NaF–LaF3 and LiF–LaF3 binary mixtures as model systems using a suite of solid-state nuclear magnetic resonance (NMR) techniques. Our findings reveal markedly distinct behaviors of the alkali cations. NaF readily reacts with LaF3 to form a crystalline NaLaF4 phase, as unambiguously confirmed by 19F and 23Na NMR, along with 2D 19F–23Na HETCOR and CP/MAS experiments. In contrast, LiF exhibits no evidence of forming Li–La–F coordination structures, instead persisting as a phase-separated LiF/ LaF3 composite. This divergence is attributed to the stronger Li–F bonding and the limited coordination flexibility of Li+, which hinders disruption of the LaF3 lattice. These mechanistic insights highlight the critical influence of alkali cation identity on the structural evolution in mixed fluoride systems and offer valuable design principles for ZBLAN and related HMF glasses.

重金属氟化物(HMF)玻璃具有广泛的红外透明度,低声子能量和潜在的氟离子电导率,使其成为光学和电化学应用的有希望的候选者。然而,控制这些性质的La3+离子的原子尺度环境仍然没有得到充分的表征。在这项工作中,我们使用一套固态核磁共振(NMR)技术系统地检查了NaF-LaF3和LiF-LaF3二元混合物作为模型系统。我们的发现揭示了碱阳离子明显不同的行为。通过19F和23Na NMR,以及2D 19F-23Na hetor和CP/MAS实验,NaF很容易与LaF3反应形成晶体NaLaF4相。相反,LiF没有形成Li-La-F配位结构的证据,而是以相分离的LiF/ LaF3复合材料的形式存在。这种发散归因于更强的Li- f键和Li+有限的配位灵活性,这阻碍了LaF3晶格的破坏。这些机制上的见解突出了碱阳离子同一性对混合氟化物体系结构演变的关键影响,并为ZBLAN和相关HMF玻璃的设计提供了有价值的原则。
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引用次数: 0
SH···S H-Bonded Ethanethiol Clusters in Cold Argon and Nitrogen Matrices: An IR Spectroscopic Study S H···S H键乙硫醇簇在冷氩和冷氮基质中的红外光谱研究
IF 2.2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-01-30 DOI: 10.1002/cphc.202500701
Ankita Kothari, Biman Bandyopadhyay

The conformational behavior of SH···S H-bonded ethanethiol (EtSH) dimer and trimer has been experimentally studied in cold and solid argon (Ar) and nitrogen (N2) matrices via analysis of the spectral region. Over 20 spectral bands were observed in both matrices exhibiting a wide range of spectral shifts (4.8–87.5 cm−1). Their spectral assignment was supported by normal mode frequencies calculated at the ωB97X-D/aug-cc-pV(D + d)Z level of theory, which displayed close match. Calculations predicted 24 (EtSH)2 conformers belonging to four classes (GG, GG′, GA, and AA) and 45 (EtSH)3 conformers from seven classes (GGG, GGG′, GG′G′, GGA, GG′A, GAA, and AAA) formed by gauche (G and G’) and anti (A) monomers. Experimentally, 16 dimers and 9 trimers were identified as the relative stability showed small variation; only 1.42 and 2.77 kcal mol−1 for dimer and trimer. However, no AA dimer as well as GAA and AAA trimer could be identified in any matrix, due to the presence of multiple lesser stable A monomers. The most stable conformers were found to possess weaker and longer SH···S H-bonds, while the lesser stable conformers possessed stronger and shorter SH···S H-bonds. When compared against SH···S H-bonds in H2S clusters, the ones in EtSH clusters showed markedly greater contribution of dispersion interaction.

通过对ν S-H $nu _{S-H}$光谱区分析,实验研究了S-H··S氢键乙硫醇(EtSH)二聚体和三聚体在冷态和固态氩(Ar)和氮(N2)基质中的构象行为。在这两个矩阵中观测到20多个光谱带,ν S-H $nu _{S-H}$的光谱位移范围很广(4.8 ~ 87.5 cm-1)。在理论计算的ωB97X-D/aug-cc-pV(D + D)Z级的正态频率支持了它们的谱分配,显示出密切的匹配。计算预测了24个(EtSH)2构象属于4类(GG、GG’、GA和AA)和45个(EtSH)3构象来自7类(GGG、GGG’、GG’、GGA、GG’A、GAA和AAA),这些构象由间扭式(G和G’)和反(A)单体形成。实验鉴定出16种二聚体和9种三聚体,其相对稳定性变化不大;二聚体和三聚体分别为1.42和2.77 kcal mol-1。然而,由于存在多个稳定性较差的A单体,在任何基质中都无法鉴定出AA二聚体以及GAA和AAA三聚体。最稳定的构象具有较弱且较长的S - H··S氢键,而较不稳定的构象具有较强且较短的S - H··S氢键。与H2S簇中的S - H··S氢键相比,EtSH簇中的氢键对色散相互作用的贡献更大。
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引用次数: 0
Carbon-13 Centerband-Only Detection of EXchange with Dynamic Nuclear Polarization 碳-13仅中心带动态核极化交换检测。
IF 2.2 3区 化学 Q3 CHEMISTRY, PHYSICAL Pub Date : 2026-01-30 DOI: 10.1002/cphc.202500585
Abel Cherian Varkey, Kai Xue, Evgeny Nimerovsky, Stefan Becker, Loren B. Andreas

The magic-angle spinning NMR technique, Centerband-Only Detection of EXchange (CODEX), can be used to determine the oligomerization state of molecules when combined with site-specific labeling. Calibrated with amino acid crystals, the method is successfully applied to proteins, primarily combined with 19F labeling. The use of 13C spins for CODEX-based oligomer determination in proteins is hampered by limited sensitivity of 13C spins due to the low gyromagnetic ratio of 13C and the presence of natural abundance background spins which contribute to the observed CODEX decay. The use of CODEX is proposed in conjunction with dynamic nuclear polarization (DNP) at low temperature to increase sensitivity. It is necessary to correct for effects of 13C present at natural abundance. A (PDSD) proton driven spin diffusion-based correction is demonstrated to be effective when the isotropic chemical shifts of the natural abundance background are distinct from the labeled site. Using a 13C-ζ-phenylalanine-labeled GB1 sample, it is demonstrated that the autocorrelation peak decay observed in a series of PDSD spectra can be utilized to correct for the additional dephasing and recover the expected CODEX decay curve. With 13C-γ-phenylalanine labeling and 13C-depleted background, mixing times up to 1500 s are demonstrated.

魔角自旋核磁共振技术,仅中心带检测交换(CODEX),可用于确定分子的寡聚化状态时,结合位点特异性标记。用氨基酸晶体校准,该方法成功地应用于蛋白质,主要结合19F标记。由于13C的低回旋磁比和自然丰度的背景自旋的存在导致观察到的CODEX衰变,13C自旋的灵敏度有限,阻碍了13C自旋在蛋白质中用于基于CODEX的低聚物测定。建议将CODEX与低温下的动态核极化(DNP)结合使用,以提高灵敏度。有必要校正自然丰度中存在的13C的影响。当自然丰度背景的各向同性化学位移与标记位点不同时,PDSD质子驱动的自旋扩散校正是有效的。使用13C-ζ-苯丙氨酸标记的GB1样品,证明了在一系列PDSD光谱中观察到的自相关峰衰减可以用来校正额外的去相并恢复预期的CODEX衰减曲线。用13C-γ-苯丙氨酸标记和13C耗尽背景,混合时间可达1500 s。
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