This study presents a comprehensive computational investigation of the adsorption and sensing potential of pristine and doped B12N12 nanocages B12N12, AlB11N12, and B12N11P toward cyanogen bromide (BrCN), a highly toxic gas. Equilibrium structures of the BrCN complexes are optimized at the ωB97XD/6-31 G (d, p) level, and adsorption energies, thermodynamic parameters (ΔH, ΔG), and electronic descriptors are calculated. Interaction analyses are performed using atoms in molecules, reduced density gradient, molecular electrostatic potential, and electron localization function approaches. The effects of solvents, nonlinear optical properties, and UV–visible spectra are examined under neutral conditions and external static electric fields (SEF, z + 0.01 to z + 0.04 au). Results reveal that BrCN adsorption is strongest on AlB11N12, exhibiting favorable thermodynamics in both gas and aqueous phases, highlighting its potential for realistic sensing applications. While increasing SEF generally reduces adsorption energies, the pristine B12N12 complex shows an exception. Reactivity and conductivity analyses indicate a superior electronic response for AlB11N12, with noncovalent interactions, primarily van der Waals forces, governing the binding. Overall, AlB11N12 is identified as a promising candidate for the design of selective and sensitive BrCN gas sensors.
本研究对原始和掺杂的B12N12纳米笼B12N12、AlB11N12和B12N11P对溴化氰(BrCN)的吸附和传感电位进行了全面的计算研究。在ωB97XD/6-31 G (d, p)水平上对BrCN配合物的平衡结构进行了优化,并计算了吸附能、热力学参数(ΔH, ΔG)和电子描述符。相互作用分析使用原子在分子中,减少密度梯度,分子静电势,和电子定位功能的方法进行。在中性条件和外加静电场(SEF, z + 0.01 ~ z + 0.04 au)下考察了溶剂、非线性光学性质和紫外可见光谱的影响。结果表明,BrCN在al11n12上的吸附最强,在气相和水相均表现出良好的热力学,突出了其在实际传感应用中的潜力。虽然增加SEF通常会降低吸附能,但原始的B12N12络合物却表现出例外。反应性和电导率分析表明,AlB11N12具有优异的电子响应,其非共价相互作用主要由范德华力控制。总的来说,AlB11N12被认为是设计选择性和敏感性BrCN气体传感器的有希望的候选者。
{"title":"Computational Study of Pristine, Al- and P-Doped B12N12 Nanocages for BrCN Adsorption and Detection under Electrostatic Fields Using Density Functional Theory, Time-Dependent-Density Functional Theory, and Reduced Density Gradient","authors":"Rezvan Alvand, Mahdi Rezaei-Sameti, Reza Rajaie Khorasani, Morteza Gharib","doi":"10.1002/cphc.202500611","DOIUrl":"10.1002/cphc.202500611","url":null,"abstract":"<p>This study presents a comprehensive computational investigation of the adsorption and sensing potential of pristine and doped B<sub>12</sub>N<sub>12</sub> nanocages B<sub>12</sub>N<sub>12</sub>, AlB<sub>11</sub>N<sub>12</sub>, and B<sub>12</sub>N<sub>11</sub>P toward cyanogen bromide (BrCN), a highly toxic gas. Equilibrium structures of the BrCN complexes are optimized at the <i>ω</i>B97XD/6-31 G (d, p) level, and adsorption energies, thermodynamic parameters (Δ<i>H</i>, Δ<i>G</i>), and electronic descriptors are calculated. Interaction analyses are performed using atoms in molecules, reduced density gradient, molecular electrostatic potential, and electron localization function approaches. The effects of solvents, nonlinear optical properties, and UV–visible spectra are examined under neutral conditions and external static electric fields (SEF, z + 0.01 to z + 0.04 au). Results reveal that BrCN adsorption is strongest on AlB<sub>11</sub>N<sub>12</sub>, exhibiting favorable thermodynamics in both gas and aqueous phases, highlighting its potential for realistic sensing applications. While increasing SEF generally reduces adsorption energies, the pristine B<sub>12</sub>N<sub>12</sub> complex shows an exception. Reactivity and conductivity analyses indicate a superior electronic response for AlB<sub>11</sub>N<sub>12</sub>, with noncovalent interactions, primarily van der Waals forces, governing the binding. Overall, AlB<sub>11</sub>N<sub>12</sub> is identified as a promising candidate for the design of selective and sensitive BrCN gas sensors.</p>","PeriodicalId":9819,"journal":{"name":"Chemphyschem","volume":"27 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2026-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146200481","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
In this study, carbon dots (C-dots) were synthesized from resorcinol and trisodium phosphate in ethylene glycol using a microwave-assisted method. The C-dots exhibited predominantly green photoluminescence when excited at 460 nm. Their absorption and emission spectra showed strong solvent-dependent variations, and the quantum yield varied between 45% and 62% depending on the solvent. Both absorption and emission maxima exhibited a noticeable red shift with increasing solvent polarity. Upon varying the excitation wavelength from 300 to 480 nm, two distinct emission bands blue and green emerged. However, no continuous spectral shift was observed in any solvent. Excitation spectra recorded at different emission wavelengths also revealed two well-defined excitation peaks. The blue emission originates from π→π* transitions within the CC sp2 domains at the core of the C-dots, whereas the green emission arises from surface states associated with phenolic –OH and phosphate functional groups. The absence of continuous spectral shift in emission suggests the absence of heterogeneity in CC sp2 domains in the structure. The pH-dependent study revealed two emissive states: a dark state at acidic pH due to protonation of surface groups, and a highly emissive state at higher pH due to their deprotonation. Time-resolved photoluminescence showed specific solvent effects on the emission originating from core and surface of the C-dots. These findings establish that the green emission is strongly governed by the surface functional groups, while the core-related blue emission remains distinct.
{"title":"Excitation-Dependent Two-State Photoluminescence of Microwave-Synthesized Carbon Dots: Solvent and pH Sensitive Behaviour","authors":"Puspal Mukherjee, Deblina Mallick, Suranjona Roy, Shovon Chatterjee, Sintu Ganai","doi":"10.1002/cphc.202500873","DOIUrl":"10.1002/cphc.202500873","url":null,"abstract":"<p>In this study, carbon dots (C-dots) were synthesized from resorcinol and trisodium phosphate in ethylene glycol using a microwave-assisted method. The C-dots exhibited predominantly green photoluminescence when excited at 460 nm. Their absorption and emission spectra showed strong solvent-dependent variations, and the quantum yield varied between 45% and 62% depending on the solvent. Both absorption and emission maxima exhibited a noticeable red shift with increasing solvent polarity. Upon varying the excitation wavelength from 300 to 480 nm, two distinct emission bands blue and green emerged. However, no continuous spectral shift was observed in any solvent. Excitation spectra recorded at different emission wavelengths also revealed two well-defined excitation peaks. The blue emission originates from <i>π</i>→<i>π</i>* transitions within the CC sp<sup>2</sup> domains at the core of the C-dots, whereas the green emission arises from surface states associated with phenolic –OH and phosphate functional groups. The absence of continuous spectral shift in emission suggests the absence of heterogeneity in CC sp<sup>2</sup> domains in the structure. The pH-dependent study revealed two emissive states: a dark state at acidic pH due to protonation of surface groups, and a highly emissive state at higher pH due to their deprotonation. Time-resolved photoluminescence showed specific solvent effects on the emission originating from core and surface of the C-dots. These findings establish that the green emission is strongly governed by the surface functional groups, while the core-related blue emission remains distinct.</p>","PeriodicalId":9819,"journal":{"name":"Chemphyschem","volume":"27 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2026-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146200418","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jarvin Mariadhas, Vinodhkumar Ganesan, Sudhan Narayanan, Sarojini Jeeva Panchu, Hendrik C. Swart, Nelson Y. Dzade, Savariroyan Stephen Rajkumar Inbanathan
Developing high-performing photocatalysts and composites generate synergetic effects in modern photocatalysis. Zinc oxide (ZnO) is a promising photocatalyst; however, its wide bandgap and high charge carrier recombination rate significantly limit its visible-light activity and overall photocatalytic efficiency. To overcome these challenges, this study focuses on the synthesis of Cu–Ag codoped ZnO/graphene nanocomposites using both hydrothermal and sonochemical methods, aiming to regulate the interfacial interaction and enhance charge separation. The hydrothermally synthesized (CAZ/Gr)H composite exhibited a lower bandgap, improved carrier transfer efficiency, and stronger Zn–O–C interfacial bonding compared to the sonochemically prepared (CAZ/Gr)S sample. Density functional theory (DFT) calculations confirmed the reduced work function and enhanced electron mobility in the hydrothermal system. Under natural sunlight, the (CAZ/Gr)H composite demonstrated superior photocatalytic degradation of organic dyes and excellent antibacterial activity against E. coli and S. aureus. These findings highlight the effectiveness of interface-regulated, green-synthesized ZnO-based nanocomposites in addressing the fundamental limitations of traditional ZnO photocatalysts.
{"title":"Comparative Study of Hydrothermal and Sonochemical Preparation of Cu and Ag Codoped ZnO/Graphene Nanocomposites for Enhanced Catalytic and Inactivation of Pathogens","authors":"Jarvin Mariadhas, Vinodhkumar Ganesan, Sudhan Narayanan, Sarojini Jeeva Panchu, Hendrik C. Swart, Nelson Y. Dzade, Savariroyan Stephen Rajkumar Inbanathan","doi":"10.1002/cphc.202500256","DOIUrl":"10.1002/cphc.202500256","url":null,"abstract":"<p>Developing high-performing photocatalysts and composites generate synergetic effects in modern photocatalysis. Zinc oxide (ZnO) is a promising photocatalyst; however, its wide bandgap and high charge carrier recombination rate significantly limit its visible-light activity and overall photocatalytic efficiency. To overcome these challenges, this study focuses on the synthesis of Cu–Ag codoped ZnO/graphene nanocomposites using both hydrothermal and sonochemical methods, aiming to regulate the interfacial interaction and enhance charge separation. The hydrothermally synthesized (CAZ/Gr)<sub>H</sub> composite exhibited a lower bandgap, improved carrier transfer efficiency, and stronger Zn–O–C interfacial bonding compared to the sonochemically prepared (CAZ/Gr)<sub>S</sub> sample. Density functional theory (DFT) calculations confirmed the reduced work function and enhanced electron mobility in the hydrothermal system. Under natural sunlight, the (CAZ/Gr)<sub>H</sub> composite demonstrated superior photocatalytic degradation of organic dyes and excellent antibacterial activity against <i>E. coli</i> and <i>S. aureus</i>. These findings highlight the effectiveness of interface-regulated, green-synthesized ZnO-based nanocomposites in addressing the fundamental limitations of traditional ZnO photocatalysts.</p>","PeriodicalId":9819,"journal":{"name":"Chemphyschem","volume":"27 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2026-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12906927/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146200431","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Xi Bai, Jinxia Li, Yanbin He, Xiaoli Yang, Haishun Wu
In molecular spintronics, achieving precise control over the spin polarization direction of transported electrons at the single-molecule level remains a great challenge. This study addresses this challenge by leveraging the unique electronic structure of bipolar magnetic molecules (BMMs). By performing density functional theory (DFT) calculations, we designed and screened a series of transition metal complexes, identifying Cr(II)(BBM)2 (where BBM is the 2,2′-bibenzoimidazole anion) as a promising BMM candidate. Combining DFT with the non-equilibrium Green's function (NEGF) formalism, spin-polarized quantum transport calculations were carried out on a molecular junction where Cr(II)(BBM)2 was coupled to graphite electrodes. Our results demonstrate that the application of an external gate voltage enables reversible switching of the spin transport direction. A gate voltage of −5 V yields a 100% spin-polarized current in the spin-up channel. Conversely, a small positive gate voltage of +0.05 V results in a completely polarized spin-down current. This gate-controlled spin channel switching, achieved through rational molecular design, underscores the potential of BMMs as fundamental components for future ultra-dense, low-power spintronic devices.
{"title":"Gate-Controlled Spin Channel Switching in Single-Molecule Magnets in Molecular Junction","authors":"Xi Bai, Jinxia Li, Yanbin He, Xiaoli Yang, Haishun Wu","doi":"10.1002/cphc.202500774","DOIUrl":"10.1002/cphc.202500774","url":null,"abstract":"<p>In molecular spintronics, achieving precise control over the spin polarization direction of transported electrons at the single-molecule level remains a great challenge. This study addresses this challenge by leveraging the unique electronic structure of bipolar magnetic molecules (BMMs). By performing density functional theory (DFT) calculations, we designed and screened a series of transition metal complexes, identifying Cr(II)(BBM)<sub>2</sub> (where BBM is the 2,2′-bibenzoimidazole anion) as a promising BMM candidate. Combining DFT with the non-equilibrium Green's function (NEGF) formalism, spin-polarized quantum transport calculations were carried out on a molecular junction where Cr(II)(BBM)<sub>2</sub> was coupled to graphite electrodes. Our results demonstrate that the application of an external gate voltage enables reversible switching of the spin transport direction. A gate voltage of −5 V yields a 100% spin-polarized current in the spin-up channel. Conversely, a small positive gate voltage of +0.05 V results in a completely polarized spin-down current. This gate-controlled spin channel switching, achieved through rational molecular design, underscores the potential of BMMs as fundamental components for future ultra-dense, low-power spintronic devices.</p>","PeriodicalId":9819,"journal":{"name":"Chemphyschem","volume":"27 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146154848","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Machine learning (ML)-enabled high-throughput screening to predict potential electrocatalysts for the CO2 reduction reaction (CO2RR) offers new insights for energy conversion and environmental remediation. In this work, for the first time, we established a comprehensive electrocatalytic database containing ≈400 entries of CO2RR catalysts. Through decision tree analysis, correlation heatmaps, and feature importance ranking, we systematically decoded structure-property relationships. Among the tested algorithms, the nonlinear tree-ensemble method Random Forest Regression demonstrated superior predictive performance for CO2RR systems. Subsequent screening of 500 000 catalyst configurations generated by the the sequential model-based algorithm configuration method, using Expected Improvement as the evaluation metric, identified promising multinary alloy catalysts for C1 molecule production. Notably, BiSb-based alloys emerged as high-potential candidates for CO2RR applications. This ML-driven paradigm highlights the growing significance of artificial intelligence in materials discovery, synergistically combining screening efficiency, prediction accuracy, and proficiency in big data processing.
{"title":"Electrocatalysis Informatics Driven Design of Formic Acid-Producing Alloy Catalysts for CO2 Electroreduction","authors":"Qianzhuo Lei, Yihan Zhang, Pengcheng Liu, Xihui Bian, Xijun Liu, Jia He","doi":"10.1002/cphc.202500591","DOIUrl":"10.1002/cphc.202500591","url":null,"abstract":"<p>Machine learning (ML)-enabled high-throughput screening to predict potential electrocatalysts for the CO<sub>2</sub> reduction reaction (CO<sub>2</sub>RR) offers new insights for energy conversion and environmental remediation. In this work, for the first time, we established a comprehensive electrocatalytic database containing ≈400 entries of CO<sub>2</sub>RR catalysts. Through decision tree analysis, correlation heatmaps, and feature importance ranking, we systematically decoded structure-property relationships. Among the tested algorithms, the nonlinear tree-ensemble method Random Forest Regression demonstrated superior predictive performance for CO<sub>2</sub>RR systems. Subsequent screening of 500 000 catalyst configurations generated by the the sequential model-based algorithm configuration method, using Expected Improvement as the evaluation metric, identified promising multinary alloy catalysts for C1 molecule production. Notably, BiSb-based alloys emerged as high-potential candidates for CO<sub>2</sub>RR applications. This ML-driven paradigm highlights the growing significance of artificial intelligence in materials discovery, synergistically combining screening efficiency, prediction accuracy, and proficiency in big data processing.</p>","PeriodicalId":9819,"journal":{"name":"Chemphyschem","volume":"27 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146154715","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The TaNn+ cationic clusters were generated via laser ablation and analyzed using time-of-flight (TOF) mass spectrometry. The mass spectrometry experiment identified the TaN12+ cluster as the dominant TaN compound, exhibiting the most intense peak. Photodissociation experiments on the TaN12+ clusters with 266 nm (4.66 eV) photons revealed that the photodissociation fragment ion TaN4+ was dominant in the spectrum. Density functional theory calculations revealed that TaN12+ has an octahedral D4h geometry symmetry with six N2 ligands. The cluster features two distinct TaN bond lengths of 2.16 and 2.22 Å. Orbital analysis uncovers the origin of this asymmetry: the four coplanar N2 ligands are strongly σ-bound and activated, whereas the two axial ones engage via weaker π-interactions. Photodissociation pathway analysis established a reversible relationship between TaN2n+ (n = 1 − 6) clusters growth-dissociation processes. Quantitative Hirshfeld charge and charge transfer analyses confirm Ta as a Lewis acid center with N2 ligands functioning as Lewis bases. The spin-density population indicates the presence of antiparallel coupling within the TaN12+ cluster, leading to ferrimagnetism. Interaction region indicator analysis confirms the presence of well-defined coordination bonds between the Ta atom and its ligands.
{"title":"Octahedral Coordinated Cluster TaN12+: Mass Spectrometry Detection, Photodissociation Observation, and Theoretical Exploration","authors":"Jia-Ming Zhang, Hao Zheng, Peng Wang, Huai-Qian Wang, Hui-Fang Li, Hong-Guang Xu, Wei-Jun Zheng","doi":"10.1002/cphc.202500833","DOIUrl":"10.1002/cphc.202500833","url":null,"abstract":"<p>The TaN<sub><i>n</i></sub><sup>+</sup> cationic clusters were generated via laser ablation and analyzed using time-of-flight (TOF) mass spectrometry. The mass spectrometry experiment identified the TaN<sub>12</sub><sup>+</sup> cluster as the dominant Ta<span></span>N compound, exhibiting the most intense peak. Photodissociation experiments on the TaN<sub>12</sub><sup>+</sup> clusters with 266 nm (4.66 eV) photons revealed that the photodissociation fragment ion TaN<sub>4</sub><sup>+</sup> was dominant in the spectrum. Density functional theory calculations revealed that TaN<sub>12</sub><sup>+</sup> has an octahedral D<sub>4h</sub> geometry symmetry with six N<sub>2</sub> ligands. The cluster features two distinct Ta<span></span>N bond lengths of 2.16 and 2.22 Å. Orbital analysis uncovers the origin of this asymmetry: the four coplanar N<sub>2</sub> ligands are strongly <i>σ</i>-bound and activated, whereas the two axial ones engage via weaker π-interactions. Photodissociation pathway analysis established a reversible relationship between TaN<sub>2<i>n</i></sub><sup>+</sup> (<i>n</i> = 1 − 6) clusters growth-dissociation processes. Quantitative Hirshfeld charge and charge transfer analyses confirm Ta as a Lewis acid center with N<sub>2</sub> ligands functioning as Lewis bases. The spin-density population indicates the presence of antiparallel coupling within the TaN<sub>12</sub><sup>+</sup> cluster, leading to ferrimagnetism. Interaction region indicator analysis confirms the presence of well-defined coordination bonds between the Ta atom and its ligands.</p>","PeriodicalId":9819,"journal":{"name":"Chemphyschem","volume":"27 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146156064","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This study investigates the Bi(III) ions electroreduction in aqueous chlorate(VII) and aqueous-ethanolic chlorate(VII)-supporting electrolytes (SE) in the presence of the anionic surfactant sodium 1-octanesulfonate (1OSASS) over a range of temperatures. Electrochemical techniques, including direct current (DC) polarography, cyclic voltammetry (CV), and square-wave voltammetry (SWV), were used to evaluate both kinetic and thermodynamic parameters. Increasing ethanol concentration led to a decrease in the standard heterogeneous electron transfer rate constant (ks), despite an increase in the diffusion coefficient of the oxidised species (Dox). Rising temperature and surfactant concentration caused a shift in the formal potential (Ef0) and an increase in redox peak separation (ΔE), indicating reduced process reversibility. Activation parameters, including activation energy (Ea), enthalpy (ΔH0), entropy (ΔS0), and Gibbs free energy (ΔG0), were determined using the Arrhenius and Eyring equations. The results confirm that 1OSASS exhibits a ‘cap-pair’ effect, likely due to competitive adsorption and complexation, significantly affecting redox kinetics. Overall, the study highlights the complex influence of the solvent–surfactant system on the structure of the electrical double layer (EDL) and on the kinetics and mechanism of the Bi(III) ions electroreduction process.
{"title":"Bi(III) Ion Electroreduction in the Presence of Ethanol and Sodium 1-Octanesulfonate at a Thin-Layer Amalgam Electrode (Renewable Liquid Silver Amalgam Film Electrode); Kinetic and Thermodynamic Aspects","authors":"Alicja Natalia Pawlak, Agnieszka Nosal-Wiercińska","doi":"10.1002/cphc.202500518","DOIUrl":"10.1002/cphc.202500518","url":null,"abstract":"<p>This study investigates the Bi(III) ions electroreduction in aqueous chlorate(VII) and aqueous-ethanolic chlorate(VII)-supporting electrolytes (SE) in the presence of the anionic surfactant sodium 1-octanesulfonate (1OSASS) over a range of temperatures. Electrochemical techniques, including direct current (DC) polarography, cyclic voltammetry (CV), and square-wave voltammetry (SWV), were used to evaluate both kinetic and thermodynamic parameters. Increasing ethanol concentration led to a decrease in the standard heterogeneous electron transfer rate constant (<i>k</i><sub>s</sub>), despite an increase in the diffusion coefficient of the oxidised species (<i>D</i><sub>ox</sub>). Rising temperature and surfactant concentration caused a shift in the formal potential (<i>E</i><sub>f</sub><sup>0</sup>) and an increase in redox peak separation (Δ<i>E</i>), indicating reduced process reversibility. Activation parameters, including activation energy (<i>E</i><sub>a</sub>), enthalpy (Δ<i>H</i><sup>0</sup>), entropy (Δ<i>S</i><sup>0</sup>), and Gibbs free energy (Δ<i>G</i><sup>0</sup>), were determined using the Arrhenius and Eyring equations. The results confirm that 1OSASS exhibits a ‘cap-pair’ effect, likely due to competitive adsorption and complexation, significantly affecting redox kinetics. Overall, the study highlights the complex influence of the solvent–surfactant system on the structure of the electrical double layer (EDL) and on the kinetics and mechanism of the Bi(III) ions electroreduction process.</p>","PeriodicalId":9819,"journal":{"name":"Chemphyschem","volume":"27 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146156123","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Vinicius Piccoli, Ander F. Pereira, Lina Rivillas-Acevedo, Nina Pastor, Ángel E. Peláez-Aguilar, Leandro Martínez
The N-terminal domain of the Drosophilamelanogaster Escargot transcription factor (Esg) is an intrinsically disordered region (IDR) that complements the DNA-binding activity of its C-terminal zinc fingers. Within this IDR, the S2 segment (residues 120–152) is predicted to form an α-helical molecular recognition feature, a transient structural element implicated in protein–protein interactions. We examined the conformational equilibrium of the S2 peptide in water and in helix-promoting 2,2,2-trifluoroethanol (TFE)/water solutions using replica exchange with solute tempering 2 (REST2) simulations and circular dichroism measurements. We show that the peptide can display substantial ellipticity, with TFE nearly doubling the helix population at 40% v/v compared to pure water. Minimum-distance distribution functions and the Kirkwood–Buff theory of solvation show that TFE preferentially accumulates on the peptide domain. This effect primarily arises from nonspecific contacts between TFE and uncharged polar and nonpolar side chains of the peptide. These findings support the view that the S2 region's structural plasticity is critical for modulating the function of Esg and provide further insights into TFE-induced helix stabilization.
{"title":"Preferential Solvation by Trifluoroethanol Drives α-Helical Folding in the Disordered S2 Region of the Escargot Protein","authors":"Vinicius Piccoli, Ander F. Pereira, Lina Rivillas-Acevedo, Nina Pastor, Ángel E. Peláez-Aguilar, Leandro Martínez","doi":"10.1002/cphc.202500668","DOIUrl":"10.1002/cphc.202500668","url":null,"abstract":"<p>The N-terminal domain of the <i>Drosophila</i> <i>melanogaster</i> Escargot transcription factor (Esg) is an intrinsically disordered region (IDR) that complements the DNA-binding activity of its C-terminal zinc fingers. Within this IDR, the S2 segment (residues 120–152) is predicted to form an <i>α</i>-helical molecular recognition feature, a transient structural element implicated in protein–protein interactions. We examined the conformational equilibrium of the S2 peptide in water and in helix-promoting 2,2,2-trifluoroethanol (TFE)/water solutions using replica exchange with solute tempering 2 (REST2) simulations and circular dichroism measurements. We show that the peptide can display substantial ellipticity, with TFE nearly doubling the helix population at 40% v/v compared to pure water. Minimum-distance distribution functions and the Kirkwood–Buff theory of solvation show that TFE preferentially accumulates on the peptide domain. This effect primarily arises from nonspecific contacts between TFE and uncharged polar and nonpolar side chains of the peptide. These findings support the view that the S2 region's structural plasticity is critical for modulating the function of Esg and provide further insights into TFE-induced helix stabilization.</p>","PeriodicalId":9819,"journal":{"name":"Chemphyschem","volume":"27 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://chemistry-europe.onlinelibrary.wiley.com/doi/epdf/10.1002/cphc.202500668","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146156120","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The function and properties of a transmembrane (TM) protein depend on the membrane composition. Consequently, the membrane adaptation to the inserted protein can also be influenced by the said membrane composition. This work examines the impact of cholesterol (Chol) composition on the Gramicidin A (gA)-induced membrane curvature and order parameter (|SCD|) of the lipids present in the membrane. The magnitude of the curvature was found to be dependent on the Chol concentration present in the membrane leaflet and resulted in countering the hydrophobic mismatch at the gA-membrane interface. Additionally, a minor reduction of the number of water molecules present in the channel and the formation of the previously proposed gA–Chol complex were noted. Using a four-region annular model, it was demonstrated that the bilayer thickness and |SCD| around the gA were affected by the Chol concentration in a distance-dependent manner. The paralipidome was enhanced in Chol and 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine lipids, which may have resulted in the reduction of energy cost associated with forming the gA conduction channel and removing the hydrophobic mismatch between the membrane and the gA dimer. This work will help better understand the role of Chol in the membrane adaptation in the presence of TM proteins.
跨膜蛋白的功能和性质取决于膜的组成。因此,对插入蛋白的膜适应性也可以受到所述膜组成的影响。本研究考察了胆固醇(Chol)组成对Gramicidin A (gA)诱导的膜曲率和膜中脂质有序参数(|SCD|)的影响。发现曲率的大小取决于膜小叶中存在的Chol浓度,并导致在ga膜界面处对抗疏水失配。此外,还注意到通道中存在的水分子数量的轻微减少以及先前提出的gA-Chol复合物的形成。利用四区环形模型,证明了gA周围的双层厚度和|SCD|受Chol浓度的影响呈距离依赖关系。在Chol和1-棕榈酰-2-油酰- asn -甘油-3-磷脂胆碱脂质中,旁脂体增强,这可能导致与形成gA传导通道相关的能量成本降低,并消除了膜与gA二聚体之间的疏水失配。这项工作将有助于更好地了解在TM蛋白存在下Chol在膜适应中的作用。
{"title":"Effect of Cholesterol on the Gramicidin A Induced Membrane Curvature and Order Parameter","authors":"Diship Srivastava, Shreya Mukherjee, Muskan Begom, Niladri Patra","doi":"10.1002/cphc.202500755","DOIUrl":"10.1002/cphc.202500755","url":null,"abstract":"<p>The function and properties of a transmembrane (TM) protein depend on the membrane composition. Consequently, the membrane adaptation to the inserted protein can also be influenced by the said membrane composition. This work examines the impact of cholesterol (Chol) composition on the Gramicidin A (gA)-induced membrane curvature and order parameter (|<i>S</i><sub>CD</sub>|) of the lipids present in the membrane. The magnitude of the curvature was found to be dependent on the Chol concentration present in the membrane leaflet and resulted in countering the hydrophobic mismatch at the gA-membrane interface. Additionally, a minor reduction of the number of water molecules present in the channel and the formation of the previously proposed gA–Chol complex were noted. Using a four-region annular model, it was demonstrated that the bilayer thickness and |<i>S</i><sub>CD</sub>| around the gA were affected by the Chol concentration in a distance-dependent manner. The paralipidome was enhanced in Chol and 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine lipids, which may have resulted in the reduction of energy cost associated with forming the gA conduction channel and removing the hydrophobic mismatch between the membrane and the gA dimer. This work will help better understand the role of Chol in the membrane adaptation in the presence of TM proteins.</p>","PeriodicalId":9819,"journal":{"name":"Chemphyschem","volume":"27 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146156488","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Nonplanar hydrocarbon structures, such as corannulene and sumanene, are of particular interest due to their bowl-shaped structures. These molecules can be conceptualized as truncated versions of a bucky-ball C60, where the curvature is reduced and the boundary is hydrogenated. The ability to catalyze the inversion of these bowl-shaped structures using 2D materials like graphene has stimulated significant research into the interaction of these structures with graphene and the catalytic effect of graphene, reducing the energy barrier for bowl-to-bowl inversion. While it has been observed in simulations that the interaction with nonplanar structures can generate a dimple-shaped deformation in graphene sheet, no mathematical model has been formulated to determine such deformation profile. As such, this article proposes a model based on calculus of variational approach to study a dimple-shaped deformation in the graphene sheet induced by fullerenes and bowl-shaped structures. The dimple shapes are shown to depend on the orientations and configurations of fullerene, corannulene, and sumanene when facing graphene sheet. The results indicate that fullerene produces the deepest dimple profile in graphene, followed by corannulene and sumanene, respectively. These results are also consistent with findings found using density functional theory.
{"title":"Modeling Graphene Deformations Induced by Bucky-Ball and Bucky-Bowl Interactions","authors":"Barry J. Cox, Amir Karton, Ngamta Thamwattana","doi":"10.1002/cphc.202500767","DOIUrl":"10.1002/cphc.202500767","url":null,"abstract":"<p>Nonplanar hydrocarbon structures, such as corannulene and sumanene, are of particular interest due to their bowl-shaped structures. These molecules can be conceptualized as truncated versions of a bucky-ball C<sub>60</sub>, where the curvature is reduced and the boundary is hydrogenated. The ability to catalyze the inversion of these bowl-shaped structures using 2D materials like graphene has stimulated significant research into the interaction of these structures with graphene and the catalytic effect of graphene, reducing the energy barrier for bowl-to-bowl inversion. While it has been observed in simulations that the interaction with nonplanar structures can generate a dimple-shaped deformation in graphene sheet, no mathematical model has been formulated to determine such deformation profile. As such, this article proposes a model based on calculus of variational approach to study a dimple-shaped deformation in the graphene sheet induced by fullerenes and bowl-shaped structures. The dimple shapes are shown to depend on the orientations and configurations of fullerene, corannulene, and sumanene when facing graphene sheet. The results indicate that fullerene produces the deepest dimple profile in graphene, followed by corannulene and sumanene, respectively. These results are also consistent with findings found using density functional theory.</p>","PeriodicalId":9819,"journal":{"name":"Chemphyschem","volume":"27 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2026-02-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146155565","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}