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Influence of the breed and litter breed composition on the growth, survival, and health of rabbits
Pub Date : 2024-12-01 DOI: 10.1016/j.anopes.2024.100083
A. Bigot, D. Savietto, S. Combes, L. Fortun-Lamothe, M. Gunia
The aim of this work was to investigate the effect of the breed and the litter breed composition on the growth, survival, and health of rabbits. Two genetic types were compared: purebred INRA 1777 (INRA) and crossbreed ¾ Fauve-de-Bourgogne × ¼ INRA 1777 (Crossbreed). To study the effect of the litter breed composition, two cross-fostering strategies were used for suckled rabbits at birth: within-genetic type and between-genetic type, where the dam raised kits of the same or different genetic types. Litter composition was maintained after weaning. A total of 1 670 growing rabbits were monitored from birth to weaning (at 35 days of age), and then 1 030 rabbits were monitored from weaning to 64 days of age. Four cohorts were raised from September 2019 to April 2020. Health was evaluated using visual health scores and white blood cell counts. Crossbred rabbits had a higher survival rate in the preweaning period (+14.9% points; P < 0.001), and a higher percentage of healthy individuals at 64 days of age (+13.9% points; P < 0.001) than purebred rabbits, even though the survival rate was equivalent (92%) between the two genetic types in the postweaning period. Crossbred rabbits were lighter than INRA rabbits (−128 g at 64 days of age; P < 0.001). The between-genetic type cross-fostering strategy had a positive effect on survival in the preweaning period (+4.6% points for INRA and +13.3% points for Crossbreed; P < 0.001) compared to the within-genetic type cross-fostering strategy. No lasting effects of the litter breed composition on postweaning survival or health were observed. Mixing kits of different genetic types within litters may be a strategy to improve the overall herd health and help reduce the use of antibiotics in rabbit farming.
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引用次数: 0
The effect of age on D20, D40 and live foal rates in the Clydesdale mare 年龄对克莱德代母马D20、D40和活胎率的影响
Pub Date : 2024-11-26 DOI: 10.1016/j.anopes.2024.100082
J.B. Thomas , M.C.G. Davies Morel , B. Lancaster
Reproductive performance is an important aspect of the equine industry. Breeders ideally want to increase the number of successful or valuable horses, whether these horses are racehorses, eventers, or show horses. This is especially important for breeds like the Clydesdale given the significant decline in breed numbers over the last century from over 20 000 registered horses in the 1920 s to less than 5 000 worldwide today. Mare age is a factor which has been shown to influence reproductive success in Thoroughbreds. However, limited work has been done on other breeds to investigate whether a similar association exists. The aims of this study were to determine the effect of mare age on (1) Day 20 pregnancy rates, (2) Day 40 pregnancy rates, and (3) live foal rates. Breeding records (n = 441) for 135 Clydesdale mares (aged 3–22) were reviewed. Generalised linear mixed models were used to determine the Day 20, Day 40, and live foal rates. Rates for country and farm were determined for live foal rates only. Mare was added as a random effect in all models to account for the fact that mares had multiple pregnancies. Mare age was categorised into four age groups: 3–6 years, 7–10 years, 11–14 years, >14 years and included as a fixed effect to look for differences across the age groups. Of the 441 pregnancies, 26 involved the use of hormone treatment. As a result, all models were re-run excluding any pregnancies where hormones were used to ensure consistency of results. The overall foaling rate (mean ± ) was 71% (66–76%). There was considerable variation in overall foal rate across farms (35% (13–65%) to 87% (66–96%)) but there was no significant difference (P = 0.177). Country was significant (P = 0.029). Mare age had a significant (P = 0.021) effect on live foaling rates. Mares aged over 14 years had a decrease of 65% in the odds of having a successful pregnancy compared to a horse 3–6 years of age. In conclusion, age was a significant factor for reproductive success in Clydesdales, with mares 14 years of age or younger having the highest reproductive success.
繁殖性能是马业的一个重要方面。育种者的理想目标是增加成功或有价值马匹的数量,无论这些马匹是赛马、赛事用马还是表演用马。这对于像克莱德代尔这样的品种尤为重要,因为在上个世纪,该品种的数量大幅减少,从 20 世纪 20 年代的 20,000 多匹注册马减少到现在的全球不足 5,000 匹。母马年龄是影响纯血马繁殖成功率的一个因素。然而,对其他马种是否存在类似关联的研究还很有限。本研究旨在确定母马年龄对(1)第 20 天妊娠率、(2)第 40 天妊娠率和(3)活驹率的影响。研究回顾了 135 头克莱德代尔母马(年龄在 3-22 岁之间)的繁殖记录(n = 441)。采用广义线性混合模型确定第 20 天、第 40 天和活胎率。国家和农场的比率仅用于确定活胎率。在所有模型中,母马作为随机效应被加入,以考虑母马多次怀孕的情况。母马年龄分为四个年龄组:3-6 岁、7-10 岁、11-14 岁和 14 岁,并将其作为固定效应,以寻找不同年龄组之间的差异。在 441 例妊娠中,有 26 例使用了激素治疗。因此,为了确保结果的一致性,我们重新运行了所有模型,排除了所有使用激素的妊娠。总体受胎率(平均值 ± )为 71% (66-76%)。各牧场的总体受胎率差异很大(35%(13-65%)至 87%(66-96%)),但无显著差异(P = 0.177)。国家差异显著(P = 0.029)。母马年龄对活胎率有显著影响(P = 0.021)。与 3-6 岁的马相比,14 岁以上的母马成功怀孕的几率降低了 65%。总之,年龄是影响克莱德雌马繁殖成功率的一个重要因素,14 岁或以下的母马繁殖成功率最高。
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引用次数: 0
Impact of the amount of milk replacer offers to Holstein dairy heifers on pre- and postweaning growth 向荷斯坦奶牛小母牛提供的代乳品量对断奶前和断奶后生长的影响
Pub Date : 2024-11-12 DOI: 10.1016/j.anopes.2024.100081
J. Philion , L. Laflamme-Michaud , D.E. Santschi , É.R. Paquet , É. Charbonneau
The whole milk or milk replacer (MR) intake by dairy heifers during their preweaning period is known to have an impact on their early and long-term development, growth, and productivity. The objective of this study was to assess whether providing ad libitum access to MR in comparison to the Canadian milk feeding recommendation would impact growth performance during the preweaning period, and if those impacts would be maintained in the postweaning period, near puberty at around 11 months of age. On a commercial farm located in Quebec, Canada, 179 Holstein heifers were randomly assigned to two treatments where they were offered (1) ad libitum access to MR (AdLib, n = 93) or (2) a maximum amount of MR corresponding to 20% of their birth weights as currently recommended by the Canadian Code of Practice for the Care and Handling of Dairy Cattle (ReCan, n = 86). Weaning started at 52 and 64 d of age for AdLib and ReCan, respectively, and was completed at 76 d of age for both treatments. Milk replacer (28% CP, 16% fat, 15% DM) was offered using an automated feeding system, and the amount of MR was gradually reduced at weaning, over 24 and 12 d for AdLib and ReCan, respectively, with an identical program for the last 12 d. Data were collected for individual heifers to obtain live BW, heart girth circumference, withers height, hip height, and hip width during the preweaning (55 d) period and around puberty (around 11 mo). Mean MR intake at peak consumption between 46 d and 52 d was 11.8 L/d for AdLib vs 8.3 L/d for ReCan. Our results show that heifers on the AdLib treatment had significantly higher BW at 55 d of age and around puberty compared to heifers on the ReCan treatment. At weaning, no significant differences were observed for heart girth circumference, withers height, hip width, or average daily gain (ADG). Near puberty, the BW and hip height are significantly higher for the AdLib heifers and, when considering only heifers consuming a minimal amount of 7.5 L/d at the peak of consumption for the analysis, heart girth circumference, and ADG are significantly higher as well. Our results indicate that preweaning body conformation gains associated with an AdLib feeding program are maintained until puberty and this is even when compared to the current Canadian milk feeding recommendation of 20% of live weight in MR.
众所周知,奶牛小母牛在断奶前的全脂奶或代乳粉(MR)摄入量会对其早期和长期发育、生长和生产性能产生影响。本研究的目的是评估与加拿大牛奶饲喂建议相比,自由摄入 MR 是否会影响断奶前的生长性能,以及这些影响是否会在断奶后接近 11 月龄青春期时持续。在加拿大魁北克省的一个商业农场中,179 头荷斯坦小母牛被随机分配到两种处理中:(1) 自由摄入 MR(AdLib,n = 93)或 (2) 按照《加拿大奶牛饲养和处理操作规范》(ReCan,n = 86)目前的建议,摄入相当于出生体重 20% 的最大 MR 量。AdLib 和 ReCan 分别于 52 和 64 日龄开始断奶,两种处理均于 76 日龄完成断奶。使用自动饲喂系统提供代乳粉(28% CP、16% 脂肪、15% DM),在断奶时逐渐减少 MR 的用量,AdLib 和 ReCan 分别在 24 天和 12 天内减少 MR 的用量,最后 12 天采用相同的程序。在断奶前(55 天)和青春期前后(约 11 个月)收集母牛个体的数据,以获得活体体重、心围、肩高、臀高和臀宽。在 46 日龄至 52 日龄期间,AdLib 和 ReCan 在高峰期的平均 MR 采食量分别为 11.8 升/日和 8.3 升/日。我们的结果表明,与使用 ReCan 处理的母牛相比,使用 AdLib 处理的母牛在 55 日龄和青春期前后的体重明显较高。断奶时,心围、肩高、臀宽和平均日增重(ADG)均无明显差异。在接近青春期时,AdLib 母牛的体重和臀高明显高于其他母牛,而且,如果只考虑分析母牛在消耗高峰期的最低消耗量 7.5 升/天,则心周长和平均日增重也明显高于其他母牛。我们的研究结果表明,与 AdLib 饲喂计划相关的断奶前体形增重可保持到青春期,即使与目前加拿大推荐的 20% 的活重(MR)牛奶饲喂量相比也是如此。
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引用次数: 0
Corrigendum to “The role of anti-E. coli antibody from maternal colostrum on the colonization of newborn dairy calves gut with Escherichia coli and the development of clinical diarrhea” [Animal Open Space 2 (2023) 100037] 来自母体初乳的抗大肠杆菌抗体对新生乳牛肠道大肠杆菌定植和临床腹泻发生的作用》[动物开放空间 2 (2023) 100037]更正
Pub Date : 2024-10-12 DOI: 10.1016/j.anopes.2024.100080
V. Gomes , B.P. Barros , D.I. Castro-Tardón , C.C. Martin , F.C.R. Santos , T. Knöbl , B.P. Santarosa , L.M. Padilha , D.J. Hurley
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引用次数: 0
Method: Body composition assessment of sows using dual-energy X-ray absorptiometry 方法:方法:使用双能 X 射线吸收测定法评估母猪的身体成分
Pub Date : 2024-10-04 DOI: 10.1016/j.anopes.2024.100079
J. Heurtault , G. Maïkoff , M.P. Létourneau-Montminy , P. Schlegel
For about 30 years, the introduction of dual X-ray absorptiometry (DXA) scanners in swine research has enabled the non-invasive study of body composition kinetics in animals. So far, the use of DXA technology in swine was focused on piglets, growing pigs up to about 140 kg of BW, as well as carcasses. Due to their size and weight, measuring a sow’s body composition is beyond the technical limits of the device. Furthermore, the chemical composition derived from DXA values is based on equations developed for pigs weighing between 20 and 100 kg. The present aim was to focus on the sow to (1) present a standard operation procedure to obtain the body composition of sows by DXA, and (2) assess the ability of available equations to predict a sow’s chemical body composition. For (1), a study investigated the effect of the animal’s position on DXA body composition. A total of 58 DXA acquisitions of sows were obtained on the standard ventral position (front and back legs extended) and on the lateral position (on left flank with right legs placed inward and left legs placed outward). The predicted BW, lean tissue mass, fat tissue mass, bone mineral content, bone area, and bone mineral density of the standard ventral position from the obtained lateral position resulted in root mean square prediction errors expressed as a percentage of the observed mean value of 0.5, 1.9, 5.0, 2.7, 3.1 and 3.5%, respectively. For (2), 3 sows were scanned alive and then slaughtered to measure chemical composition, then, these results were compared with equations based on growing pig data. The chemical composition of the carcass was predicted more accurately than that of the empty body. Regarding minerals, the Ca and P contents of the empty body were overestimated (12 and 3% respectively), as with the Ca content of the carcass (6%), while the P content of the carcass was underestimated (5%). In conclusion, the proposed material and operation procedure enables the scanning of sows which exceed the maximal specification of a DXA device. Furthermore, before concluding the accuracy of the chemical body composition prediction equations based on DXA data for pigs weighing between 20 and 100 kg, additional data are required to determine their applicability to sows.
大约 30 年来,双 X 射线吸收仪(DXA)扫描仪在猪研究中的应用使得对动物体成分动力学的无创研究成为可能。迄今为止,DXA 技术在猪身上的应用主要集中在仔猪、体重不超过 140 千克的生长猪以及胴体上。由于母猪的体型和体重,测量母猪的身体成分超出了设备的技术极限。此外,根据 DXA 值得出的化学成分是基于为体重在 20 至 100 公斤之间的猪开发的方程。目前的目标是以母猪为重点,(1) 提出通过 DXA 获取母猪身体成分的标准操作程序,(2) 评估现有公式预测母猪身体化学成分的能力。对于(1),一项研究调查了动物位置对 DXA 体成分的影响。在标准腹位(前腿和后腿伸直)和侧位(左侧腹,右腿向内,左腿向外)上共采集了 58 头母猪的 DXA 图像。根据侧卧位对标准腹位的体重、瘦肉组织质量、脂肪组织质量、骨矿物质含量、骨面积和骨矿物质密度进行预测,得出的均方根预测误差(以占观测平均值的百分比表示)分别为 0.5%、1.9%、5.0%、2.7%、3.1% 和 3.5%。对于 (2),对 3 头母猪进行活体扫描,然后宰杀以测量化学成分,然后将这些结果与基于生长猪数据的方程进行比较。对胴体化学成分的预测比对空体化学成分的预测更准确。在矿物质方面,空体的钙和磷含量被高估了(分别为 12% 和 3%),胴体的钙含量被高估了(6%),而胴体的磷含量被低估了(5%)。总之,所建议的材料和操作程序可对超过 DXA 设备最大规格的母猪进行扫描。此外,在对基于 DXA 数据的体重在 20 至 100 公斤之间的猪的化学体成分预测方程的准确性得出结论之前,还需要更多数据来确定其对母猪的适用性。
{"title":"Method: Body composition assessment of sows using dual-energy X-ray absorptiometry","authors":"J. Heurtault ,&nbsp;G. Maïkoff ,&nbsp;M.P. Létourneau-Montminy ,&nbsp;P. Schlegel","doi":"10.1016/j.anopes.2024.100079","DOIUrl":"10.1016/j.anopes.2024.100079","url":null,"abstract":"<div><div>For about 30 years, the introduction of dual X-ray absorptiometry (<strong>DXA</strong>) scanners in swine research has enabled the non-invasive study of body composition kinetics in animals. So far, the use of DXA technology in swine was focused on piglets, growing pigs up to about 140 kg of BW, as well as carcasses. Due to their size and weight, measuring a sow’s body composition is beyond the technical limits of the device. Furthermore, the chemical composition derived from DXA values is based on equations developed for pigs weighing between 20 and 100 kg. The present aim was to focus on the sow to (1) present a standard operation procedure to obtain the body composition of sows by DXA, and (2) assess the ability of available equations to predict a sow’s chemical body composition. For (1), a study investigated the effect of the animal’s position on DXA body composition. A total of 58 DXA acquisitions of sows were obtained on the standard ventral position (front and back legs extended) and on the lateral position (on left flank with right legs placed inward and left legs placed outward). The predicted BW, lean tissue mass, fat tissue mass, bone mineral content, bone area, and bone mineral density of the standard ventral position from the obtained lateral position resulted in root mean square prediction errors expressed as a percentage of the observed mean value of 0.5, 1.9, 5.0, 2.7, 3.1 and 3.5%, respectively. For (2), 3 sows were scanned alive and then slaughtered to measure chemical composition, then, these results were compared with equations based on growing pig data. The chemical composition of the carcass was predicted more accurately than that of the empty body. Regarding minerals, the Ca and P contents of the empty body were overestimated (12 and 3% respectively), as with the Ca content of the carcass (6%), while the P content of the carcass was underestimated (5%). In conclusion, the proposed material and operation procedure enables the scanning of sows which exceed the maximal specification of a DXA device. Furthermore, before concluding the accuracy of the chemical body composition prediction equations based on DXA data for pigs weighing between 20 and 100 kg, additional data are required to determine their applicability to sows.</div></div>","PeriodicalId":100083,"journal":{"name":"Animal - Open Space","volume":"3 ","pages":"Article 100079"},"PeriodicalIF":0.0,"publicationDate":"2024-10-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142422072","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Method: Protocol for in-ovo stimulation with selected pro-/prophy-biotics to mitigate Campylobacter jejuni in broiler chickens 方法:使用特定原/原生物制剂进行体内刺激以减少肉鸡空肠弯曲菌感染的方案
Pub Date : 2024-09-25 DOI: 10.1016/j.anopes.2024.100077
R.N. Wishna-Kadawarage , R.M. Hickey , M. Siwek
Broiler chickens are a natural reservoir for Campylobacter which is largely responsible for the highest reported zoonotic infection within the Europe, Campylobacteriosis. However, despite extensive scientific investment, the broiler industry is still in need of effective intervention strategies to control this pathogen in broiler production. In-ovo modulation has been studied extensively as a method to positively modulate the gastrointestinal microflora in broiler chickens. However, the efficacy of an in-ovo method against Campylobacter has not been studied to date to the best of our knowledge. Therefore, the current study was conducted to validate the efficacy of a protocol for in-ovo stimulation of ROS308 broiler chicken eggs with Leuconostoc mesenteroides B/00288 strain alone (probiotic) and in combination with garlic aqueous extract (prophybiotic) in reducing the abundance of Campylobacter jejuni in ceca. On 12th day of incubation, the selected doses of the probiotic and prophybiotic were injected into the air cell of the eggs as treatments. Two control groups (Negative control: without injections and positive control injected with physiological saline) were also included in the experiment. The impact of the protocol on hatch parameters (hatchability, chick length, chick weight and Pasgar score), BWs and feed conversion ratio was recorded. When the chickens were 21 days old, an infection challenge with Campylobacter jejuni was performed. A quantitative PCR method was used to quantify the Campylobacter relative abundance in faeces (one week postinfection) and in the cecal content (at the age of 35 days). The probiotic treatment significantly (P-value = 0.0020) reduced the Campylobacter jejuni numbers in the ceca while the prophybiotic treatment resulted in a statistical tendency (P-value = 0.0691) in reducing the abundance of Campylobacter jejuni in ceca. Both treatments had no adverse effects on the hatch or production parameters studied. In conclusion, in-ovo stimulation with the probiotic Leuconostoc mesenteroides demonstrated potential in reducing Campylobacter jejuni colonisation in the ceca of ROSS308 broiler chickens infected at 3 weeks of age.
肉鸡是弯曲杆菌的天然贮存库,而弯曲杆菌病是欧洲报告的人畜共患传染病中发病率最高的一种。然而,尽管进行了大量的科学投资,肉鸡行业仍然需要有效的干预策略来控制肉鸡生产中的这种病原体。作为一种积极调节肉鸡胃肠道微生物菌群的方法,体内调控已被广泛研究。然而,据我们所知,迄今为止还没有研究过体内调节法对弯曲杆菌的功效。因此,本研究验证了在 ROS308 型肉鸡蛋中单独添加介尾白色念珠菌 B/00288 株(益生菌)和与大蒜水提取物联合添加(预防菌)对降低盲肠中空肠弯曲菌数量的效果。在孵化的第 12 天,将选定剂量的益生菌和预防性药物注入鸡蛋的气孔中作为处理。实验还包括两个对照组(阴性对照组:不注射;阳性对照组:注射生理盐水)。实验记录了方案对孵化参数(孵化率、雏鸡体长、雏鸡体重和 Pasgar 评分)、体重和饲料转化率的影响。鸡龄为 21 天时,进行空肠弯曲菌感染挑战。采用定量 PCR 方法量化粪便(感染后一周)和盲肠内容物(35 日龄)中弯曲杆菌的相对丰度。益生菌处理明显(P 值 = 0.0020)减少了盲肠中空肠弯曲菌的数量,而预防性处理在减少盲肠中空肠弯曲菌数量方面有统计学趋势(P 值 = 0.0691)。两种处理方法对所研究的孵化或生产参数均无不利影响。总之,在 3 周龄时感染的 ROSS308 肉鸡盲肠中使用益生菌中肠联念珠菌可减少空肠弯曲菌的定植。
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引用次数: 0
Data paper: Dataset describing the effects of environmental enrichment and sows’ characteristics on the peripheral blood mononuclear cell transcriptome 数据论文:描述环境富集和母猪特征对外周血单核细胞转录组影响的数据集
Pub Date : 2024-09-25 DOI: 10.1016/j.anopes.2024.100078
M.M. Lopes , A. Vincent , F. Thomas , C. Clouard , R. Comte , M. Brien , J. Chambeaud , F. Hérault , E. Guichoux , C. Boury , R. Resmond , E. Merlot
Blood immune cells transcriptome can be used as a tool to investigate molecular mechanisms or identify biomarkers of several physiological processes. Factors such as reproductive status, age, or physical and mental states resulting from social and non-social environmental aspects can influence the activation and phenotype of immune cells. This data paper describes the gene expression levels in peripheral blood mononuclear cells (PBMCs) of multiparous sows, using RNA sequencing. Sows of various parity ranks were housed during gestation in a stable social group either in a conventional environment on a slatted concrete floor (C) or in an enriched environment with deep straw litter and a bigger space allowance (E). Videos were recorded between days 99 and 104 of gestation (G; G99 and G104) to determine the sows’ dominance status. Blood samples were collected at 98 days of gestation (G98) and 12 days of lactation (L12), and the PBMC fraction was isolated. Then, total RNA was extracted from PBMC and submitted to next-generation sequencing using the Illumina NextSeq 2000 system. Quality control, mapping, and annotation were performed using the Dragen RNA v3.8.4 software. The differential analysis was performed using the R package DESeq2. Differentially expressed genes (DEGs) were identified using a criterion of adjusted P-value (p-adj) cut-off <0.1 and fold-change >1.2 or <0.83 to identify up-regulated and down-regulated genes. For each time point (G98 and L12), the following contrasts were used for the differential analysis: sows housed in the enriched environment compared to the conventional environment [E vs C], dominant (Dom) sows compared to subordinate (Sub) sows [Dom vs Sub], and high parity sows (HP: 4th gestation or higher) compared to low parity sows (LP: 2nd and 3rd gestation) [HP vs LP]. The identified DEGs were used for functional analysis using the Database for Annotation, Visualisation, and Integrated Discovery software. To our knowledge, this is the first dataset allowing the investigation of the simultaneous effects of housing environment, dominance status, and parity on the PBMC transcriptome of adult sows. These data could also be used to compare the transcriptomes of pregnant and lactating females.
血液免疫细胞转录组可作为一种工具,用于研究多种生理过程的分子机制或确定生物标志物。生殖状况、年龄或社会和非社会环境导致的身体和精神状态等因素都会影响免疫细胞的活化和表型。本论文利用 RNA 测序技术描述了多胎母猪外周血单核细胞(PBMC)的基因表达水平。在妊娠期间,不同奇数等级的母猪被饲养在一个稳定的社会群体中,既可饲养在铺有板条的混凝土地板上的传统环境中(C),也可饲养在铺有深稻草垫层和更大空间的富集环境中(E)。在妊娠期第 99 天和 104 天(G;G99 和 G104)录制视频,以确定母猪的优势地位。在妊娠 98 天(G98)和哺乳 12 天(L12)采集血样,并分离出 PBMC 部分。然后,从 PBMC 中提取总 RNA,并使用 Illumina NextSeq 2000 系统进行下一代测序。使用Dragen RNA v3.8.4软件进行质量控制、图谱绘制和注释。差异分析使用 R 软件包 DESeq2 进行。差异表达基因(DEGs)的鉴定标准是调整P值(p-adj)截断值<0.1和折叠变化>1.2或<0.83,以确定上调和下调基因。在每个时间点(G98 和 L12),采用以下对比进行差异分析:饲养在富集环境中的母猪与饲养在常规环境中的母猪进行对比[E vs C];优势母猪(Dom)与劣势母猪(Sub)进行对比[Dom vs Sub];高胎次母猪(HP:第 4 胎或以上)与低胎次母猪(LP:第 2 胎和第 3 胎)进行对比[HP vs LP]。利用注释、可视化和综合发现数据库软件(Database for Annotation, Visualisation, and Integrated Discovery software)对确定的 DEGs 进行了功能分析。据我们所知,这是第一个可以同时研究饲养环境、优势地位和奇偶性对成年母猪PBMC转录组影响的数据集。这些数据还可用于比较怀孕母猪和哺乳母猪的转录组。
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引用次数: 0
Method: Standard operating procedure for the administration of swallowable devices to study pig’s gut content in a non-invasive way 方法:使用吞咽装置以非侵入方式研究猪肠道内容物的标准操作程序
Pub Date : 2024-09-12 DOI: 10.1016/j.anopes.2024.100076
I. García Viñado , G. Bee , P. Trevisi , C. Ollagnier

Due to the evolution of welfare laws and the search for novel methods to study pig microbiota, the development of precise and non-invasive sampling methods is key to studying the microbial communities that inhabit the guts of pigs. Administering swallowable devices to pigs is always a challenge due to factors such as anatomy, the requirement for specific materials, and the need to restrain the animals. In this study, we describe a step-by-step protocol on how to administer Capsule for Sampling (CapSa), a biocompatible non-invasive device to study pig’s microbiota without harming the animals. The validation of the protocol was done through two different studies. In Study 1, 92 Swiss Large White pigs (BW: 6.45–71.3 kg) were administered two capsules each and monitored for the following 3 days for capsule retrieval. On day 3, all pigs were euthanised to locate the missing capsules directly from their gastrointestinal tracts. In Study 2, 16 Swiss Large White pigs were selected at weaning and administered CapSas at five different timepoints (T1: 52 ± 3; T2: 70 ± 3; T3: 83 ± 3; T4: 110 ± 3; T5: 126 ± 3 days of age). To retrieve the capsules in the faeces, pigs were monitored 3 days postadministration. At T5, the pigs were slaughtered, and CapSas that were not found in the faeces, termed as missing CapSas, were retrieved from their gastrointestinal tracts. The protocol entails acclimation of the animals, housing modifications, administration of a prokinetic agent (prucalopride) to facilitate gastric emptying, and oesophageal intubations to overcome challenges related to administration, gastric blockage, and retrieval of the capsules. In Study 1, 46.74% of the administered CapSas were found in the faeces within 72 h postadministration, with 47.67% retrieved within the first 24 h, and 28.26% were located in the stomach. The CapSa retrieval was lowest in light pigs (<12 kg). In Study 2, 75.6% of CapSas were recovered in the faeces within 72 h postadministration, with 51.23% retrieved within the first 24 h. The CapSa retrieval rates varied depending on the administration time point being lowest at T1 and T3 and highest at T2 with intermediate values at T4 and T5. In both studies, the pH levels were affected by transit time (P < 0.01), resulting in a more acidic content when capsules were expelled after 36–40 h. To the contrary, the volume of the CapSa content was never affected by transit time (P < 0.05). In both studies, postmortem observations showed no health-related issues except one pig from Study 2 excluded due to respiratory distress. The present study describes a valid procedure for administering CapSa or any other swallowable devices in pigs. Moreover, this procedure is applicable to singular and repetitive administrations over the lifespan of pigs.

由于福利法的演变和对猪微生物群研究新方法的探索,开发精确的非侵入性采样方法是研究猪内脏微生物群落的关键。由于解剖学、对特定材料的要求以及需要约束动物等因素,给猪使用可吞咽装置始终是一项挑战。在本研究中,我们介绍了如何在不伤害动物的情况下给猪注射采样胶囊(CapSa)这一生物相容性非侵入性装置,以研究猪的微生物群。该方案通过两项不同的研究进行了验证。在研究 1 中,给 92 头瑞士大白猪(体重:6.45-71.3 千克)各注射了两粒胶囊,并在随后的 3 天内对其进行监测,以便取回胶囊。第 3 天,对所有猪实施安乐术,直接从其胃肠道中找到丢失的胶囊。在研究 2 中,16 头瑞士大白猪在断奶时被选中,并在五个不同的时间点(T1:52 ± 3;T2:70 ± 3;T3:83 ± 3;T4:110 ± 3;T5:126 ± 3 日龄)服用 CapSas。为了从粪便中提取胶囊,对给药后 3 天的猪进行了监测。到了 T5,猪被宰杀,从猪的胃肠道中取出粪便中未发现的 CapSas,称作丢失的 CapSas。该方案需要对动物进行适应性训练、调整饲养环境、使用促胃液分泌剂(普鲁卡必利)以促进胃排空,以及进行食道插管以克服与给药、胃阻塞和取回胶囊有关的挑战。在研究 1 中,46.74% 的给药 CapSas 在给药后 72 小时内出现在粪便中,47.67% 在最初 24 小时内被取回,28.26% 位于胃中。轻型猪(12 千克)的 CapSa 回收率最低。在研究 2 中,75.6% 的 CapSa 在给药后 72 小时内从粪便中回收,其中 51.23% 的 CapSa 在给药后 24 小时内回收。CapSa 的回收率因给药时间点的不同而不同,T1 和 T3 最低,T2 最高,T4 和 T5 处于中间值。在这两项研究中,pH值都受到运输时间的影响(P <0.01),当胶囊在36-40小时后排出时,pH值偏酸。在这两项研究中,除了研究 2 中的一头猪由于呼吸困难而被排除在外外,其他的死后观察结果均未显示与健康有关的问题。本研究描述了给猪注射 CapSa 或任何其他可吞咽装置的有效程序。此外,该程序还适用于在猪的一生中进行单次或重复给药。
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引用次数: 0
Method: eFeederRab: A new electronic feeder to measure individual feed intake−related traits on growing rabbits raised in collective cages 方法:eFeederRab:新型电子饲喂器:测量集体笼养生长兔的个体采食量相关特征
Pub Date : 2024-08-23 DOI: 10.1016/j.anopes.2024.100074
J.P. Sánchez , J. Muñoz , R. Chetrit , M. Pascual , M. Piles

Measuring individual intake in animals raised in groups is a paramount aspect for different fields of animal production, both with a direct implication and relevance on the production itself, i.e. within breeding programmes for the improvement of feed efficiency; or for research in different disciplines such as animal behaviour or animal nutrition. The rabbit is one of the few species for which there is no device for measuring this trait. Thus, we aimed to design and manufacture a feeding device (eFeederRab) allowing such recording. In the present study, we describe the methods behind the tool we have developed, accompanying the description with a set of descriptive statistics showing the performance of the tool. We use records from 430 animals belonging to lines selected for different feed efficiency criteria − some of them raised using the eFeederRab -, as well as from their control unselected population. Measurements were taken from 35-38 to 56–59 days of age. The lines selected for reducing residual feed intake clearly show a lower daily feed intake, 8–15% when the lines were compared using eFeederRab, and 7–10% when the lines were compared using conventional feeders. These are clear indications about the validity of the device for recording data to be used in selection to improve feed efficiency, i.e., biologically meaningful records. In spite of the biological relevance of the recorded data, when comparing performances of the lines raised using eFeederRab or conventional feeders, it was evident that feed intake was reduced by around 12–20% when using the electronic feeder, with the subsequence growth penalization. Note however that this penalty is proportional to the intake; therefore, the feed conversion ratio remains fairly similar (2.99–3.13) between the two types of feeders also reflecting the expected tendency according to the different selection criteria across lines. We hypothesise that this reduction in the intake is a consequence of the less comfortable eating posture that eFeederRab imposes: each animal must eat alone and inside a tunnel for leading the animals one by one towards the feeder to grant their proper identification by radio frequency. We can conclude that although the eFeederRab is a device with different animal feeding conditions than those on conventional feeder, the records, despite being noisy, can be successfully used to improve the genetic selection of feed efficiency in rabbits.

测量群养动物的个体采食量是动物生产不同领域的一个重要方面,既对生产本身有直接影响和相关性,即在提高饲料效率的育种计划中,也对动物行为或动物营养等不同学科的研究有直接影响和相关性。兔子是目前还没有测量这一特性的设备的少数物种之一。因此,我们的目标是设计和制造一种可以进行此类记录的饲喂装置(eFeederRab)。在本研究中,我们介绍了我们所开发的工具背后的方法,并附有一组描述性统计数据来显示该工具的性能。我们使用了根据不同饲料效率标准筛选出的 430 头动物的记录,其中一些是使用 eFeederRab 进行饲养的,还有未筛选出的对照组动物的记录。测量时间为 35-38 日龄至 56-59 日龄。被选中减少残余饲料摄入量的品系明显表现出较低的日饲料摄入量,使用 eFeederRab 进行比较的品系为 8-15%,使用传统饲喂器进行比较的品系为 7-10%。这些都清楚地表明,该设备记录的数据是有效的,可用于提高饲料效率的筛选,即具有生物学意义的记录。尽管记录的数据具有生物学意义,但在比较使用电子饲喂器和传统饲喂器饲养的品系的表现时发现,使用电子饲喂器时饲料摄入量减少了约 12-20%,随后的生长也受到影响。但要注意的是,这种惩罚与采食量成正比;因此,两种喂料器的饲料转化率仍然相当接近(2.99-3.13),这也反映了根据不同品系的选择标准所预期的趋势。我们推测,采食量减少的原因是 eFeederRab 的进食姿势不太舒适:每只动物必须单独进食,而且必须在一个通道内进食,该通道用于将动物逐一引向饲喂器,以便通过无线电频率对其进行正确识别。我们可以得出结论,尽管电子饲喂器是一种动物饲喂条件与传统饲喂器不同的设备,但尽管记录有噪音,仍可成功用于提高兔子饲料效率的遗传选择。
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引用次数: 0
Prediction of the digestible energy content of hay for horses from their chemical composition using the National Institute of Agricultural Research system: new models 利用国家农业研究所系统,从化学成分预测马用干草的可消化能量含量:新模型
Pub Date : 2024-08-16 DOI: 10.1016/j.anopes.2024.100075
W. Martin-Rosset, D. Andueza, M. Vermorel

Digestible energy (DE) accounts for the major fraction of the energy content of hay fed to equines, but DE measurements are difficult to carry out, and researchers have developed models for predicting the DE content of hays for horses from their chemical composition. Digestible energy varies depending on botanical family, species, and agronomic and climatic conditions. A database of 61 hays harvested in a temperate zone (32 natural grassland hays, 16 grass hays and 13 lucerne hays) was set up from studies carried out at the French National Institute of Agricultural Research (INRAe) or extracted from the literature using a similar methodological corpus, to test the relevance of crude fibre (CF), NDF, ADF, total free reducing sugars (TFRS), CP as potential criteria for the prediction of organic matter digestibility (OMD), energy digestibility (ED) and digestible energy (DE). Models were developed for natural grassland hay, grass hay and lucerne hay. The adjusted cross-validation R2 values (R2CV) of the models obtained using CF, ADF or NDF as single variables or in combination with CP for the prediction of OMD, ED and DE of natural grassland hay ranged from 0.84 to 0.86, from 0.83 to 0.86 and from 0.82 to 0.84, respectively. For grass hay, the R2CV were lower and ranged from 0.65 to 0.71, from 0.63 to 0.71 and from 0.62 to 0.68, for the prediction of OMD, ED and DE, respectively. Finally, for lucerne hay, the R2CV ranged from 0.65 to 0.72, from 0.34 to 0.74 and from 0.25 to 0.67, for the prediction of OMD, ED and DE, respectively. The R2CV of the prediction models of ED and DE were more heterogeneous for lucerne hay than for grassland and grass hay. The TFRS content of hay was never a significant predictive variable of OMD, ED or DE, either as single variable or combined with any cell wall content criterion. The models obtained in the present study improved those proposed by INRA to date.

可消化能(DE)是饲喂马匹的干草中能量含量的主要部分,但可消化能的测量很难进行,研究人员已经开发出了从化学成分预测马匹干草中可消化能含量的模型。可消化能量因植物科属、物种、农艺和气候条件而异。从法国国家农业研究院(INRAe)开展的研究或使用类似方法从文献中提取的资料中建立了一个包含 61 种在温带地区收获的干草(32 种天然草地干草、16 种禾本科干草和 13 种苜蓿干草)的数据库,以测试粗纤维(CF)、NDF、ADF、总游离还原糖(TFRS)、CP 作为预测有机物消化率(OMD)、能量消化率(ED)和可消化能(DE)的潜在标准的相关性。为天然草地干草、禾本科干草和苜蓿干草建立了模型。将 CF、ADF 或 NDF 作为单一变量或与 CP 结合使用以预测天然草地干草的 OMD、ED 和 DE,所得到的模型的调整交叉验证 R2 值(R2CV)分别为 0.84 至 0.86、0.83 至 0.86 和 0.82 至 0.84。对于禾本科干草,预测 OMD、ED 和 DE 的 R2CV 较低,分别为 0.65 至 0.71、0.63 至 0.71 和 0.62 至 0.68。最后,对于苜蓿干草,预测 OMD、ED 和 DE 的 R2CV 分别为 0.65 至 0.72、0.34 至 0.74 和 0.25 至 0.67。与草地和禾本科干草相比,苜蓿干草 ED 和 DE 预测模型的 R2CV 差异更大。无论是作为单一变量还是与任何细胞壁含量标准相结合,干草的TFRS含量都不是OMD、ED或DE的重要预测变量。本研究获得的模型改进了迄今为止法国国家农业研究院提出的模型。
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