Pub Date : 2026-01-27DOI: 10.1016/j.dmpk.2026.101523
Xinyuan Zhang, Grace Fraczkiewicz, Viera Lukacova
Absorption is the first and imperative step to understanding the pharmacokinetics (PK) and ADME (absorption, distribution, metabolism, and excretion) of a drug product. Drug interactions also occur during the absorption process and have the potential to alter the PK of a drug, causing safety and efficacy concerns. Physiologically based pharmacokinetic (PBPK) modeling has emerged as a powerful tool to assess these interactions, supporting drug development and regulatory decisions. This review explores key mechanisms underlying oral absorption-mediated DDIs, including alterations in gastric pH, gastric emptying, gastrointestinal transit, and food effects. While interactions involving intestinal transporters and enzymes are reviewed in other articles of this special issue, this work emphasizes changes in gastrointestinal factors that influence drug absorption. Applications of PBPK modeling are illustrated through case examples predicting pH-dependent interactions, gastric transit alterations, and food effects. Regulatory acceptance of PBPK-based DDI assessments is discussed with reference to recent U.S. Food and Drug Administration (FDA) and European Medicines Agency (EMA) case studies. Finally, future directions highlight the integration of machine learning and global harmonization of regulatory expectations. PBPK modeling offers a mechanistic approach for assessing absorption-mediated DDI risk, enhancing decision-making in drug development and regulatory science.
{"title":"PBPK Modeling Addresses Oral Absorption-Mediated Drug Interactions.","authors":"Xinyuan Zhang, Grace Fraczkiewicz, Viera Lukacova","doi":"10.1016/j.dmpk.2026.101523","DOIUrl":"https://doi.org/10.1016/j.dmpk.2026.101523","url":null,"abstract":"<p><p>Absorption is the first and imperative step to understanding the pharmacokinetics (PK) and ADME (absorption, distribution, metabolism, and excretion) of a drug product. Drug interactions also occur during the absorption process and have the potential to alter the PK of a drug, causing safety and efficacy concerns. Physiologically based pharmacokinetic (PBPK) modeling has emerged as a powerful tool to assess these interactions, supporting drug development and regulatory decisions. This review explores key mechanisms underlying oral absorption-mediated DDIs, including alterations in gastric pH, gastric emptying, gastrointestinal transit, and food effects. While interactions involving intestinal transporters and enzymes are reviewed in other articles of this special issue, this work emphasizes changes in gastrointestinal factors that influence drug absorption. Applications of PBPK modeling are illustrated through case examples predicting pH-dependent interactions, gastric transit alterations, and food effects. Regulatory acceptance of PBPK-based DDI assessments is discussed with reference to recent U.S. Food and Drug Administration (FDA) and European Medicines Agency (EMA) case studies. Finally, future directions highlight the integration of machine learning and global harmonization of regulatory expectations. PBPK modeling offers a mechanistic approach for assessing absorption-mediated DDI risk, enhancing decision-making in drug development and regulatory science.</p>","PeriodicalId":11298,"journal":{"name":"Drug Metabolism and Pharmacokinetics","volume":"67 ","pages":"101523"},"PeriodicalIF":2.2,"publicationDate":"2026-01-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146141214","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Renal transporters play a critical role in the renal secretion of prescription drugs and endogenous metabolites. Inhibition of these transporters can increase the plasma exposure of a co-administered drug by reducing its renal clearance, potentially resulting in clinically significant drug-drug interactions (DDIs). The ICH M12 guideline promotes the use of endogenous substrates as biomarkers offers a promising approach for assessing transporter inhibition during early-phase clinical studies, potentially reducing reliance on traditional probe-based DDI trials. This strategy may reduce or eliminate the need for dedicated DDI studies using exogenous probe substrates, thereby streamlining drug development and advancing precision medicine. This review provides an overview of the discovery, evaluation, and application of renal transporter biomarkers-specifically endogenous metabolites-in the context of transporter-mediated DDI risk assessment. We highlight the use of in vitro and in vivo models, including transporter-overexpressing cell systems, knockout mice, and clinical DDI samples, to identify and validate biomarkers for renal transporters. Human genetic studies further support biomarker discovery by linking transporter variants to metabolite levels. Analytical tools like targeted and untargeted metabolomic approaches are essential for biomarker identification and quantification. Additionally, physiologically based pharmacokinetic (PBPK) modeling is discussed as a critical tool for translating biomarker data into clinical DDI predictions.
{"title":"Integrating renal transporter biomarkers into drug development: Discovery, clinical assessment, and precision medicine.","authors":"Sook Wah Yee, Bhagwat Prasad, Hiroyuki Kusuhara, Emi Kimoto","doi":"10.1016/j.dmpk.2026.101515","DOIUrl":"https://doi.org/10.1016/j.dmpk.2026.101515","url":null,"abstract":"<p><p>Renal transporters play a critical role in the renal secretion of prescription drugs and endogenous metabolites. Inhibition of these transporters can increase the plasma exposure of a co-administered drug by reducing its renal clearance, potentially resulting in clinically significant drug-drug interactions (DDIs). The ICH M12 guideline promotes the use of endogenous substrates as biomarkers offers a promising approach for assessing transporter inhibition during early-phase clinical studies, potentially reducing reliance on traditional probe-based DDI trials. This strategy may reduce or eliminate the need for dedicated DDI studies using exogenous probe substrates, thereby streamlining drug development and advancing precision medicine. This review provides an overview of the discovery, evaluation, and application of renal transporter biomarkers-specifically endogenous metabolites-in the context of transporter-mediated DDI risk assessment. We highlight the use of in vitro and in vivo models, including transporter-overexpressing cell systems, knockout mice, and clinical DDI samples, to identify and validate biomarkers for renal transporters. Human genetic studies further support biomarker discovery by linking transporter variants to metabolite levels. Analytical tools like targeted and untargeted metabolomic approaches are essential for biomarker identification and quantification. Additionally, physiologically based pharmacokinetic (PBPK) modeling is discussed as a critical tool for translating biomarker data into clinical DDI predictions.</p>","PeriodicalId":11298,"journal":{"name":"Drug Metabolism and Pharmacokinetics","volume":"67 ","pages":"101515"},"PeriodicalIF":2.2,"publicationDate":"2026-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146137323","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-24DOI: 10.1016/j.dmpk.2025.101514
Amin Rostami-Hodjegan
In this mini-review, the readers are provided with series of key references which highlight the latest trends in the space of physiologically-based pharmacokinetics (PBPK) concerning assessment and management of drug-drug interactions (DDI). Over the last two decades such applications have moved from an academic nicety to industrial necessity, and then regulatory requirement. However, the regulatory uptake has not been uniform and it has not taken the same path. These have been a reflection of the set up in various regulatory agencies and their breadth and depth of work-force, centralized or de-centralized nature of geographical distribution of assessors, existence or lack of internal research groups to examine multi-layer large scale models and many other factors. However, despite these operational differences, recent qualification opinion by EMA on platforms used for PBPK evaluation in the space of DDI is a significant step that heralds a general worldwide consensus for harmonization in use of these new technologies as a follow up to efforts within International Harmonization Committee in the space via publication of their M12 Guidance. Readers will get to know the journey that has taken us to this point and some forthcoming directions on expansion of applications.
{"title":"Positive implications of PBPK platform qualification for predicting drug–drug interactions: Taking on cracks only to see bigger gaps!","authors":"Amin Rostami-Hodjegan","doi":"10.1016/j.dmpk.2025.101514","DOIUrl":"10.1016/j.dmpk.2025.101514","url":null,"abstract":"<div><div>In this mini-review, the readers are provided with series of key references which highlight the latest trends in the space of physiologically-based pharmacokinetics (PBPK) concerning assessment and management of drug-drug interactions (DDI). Over the last two decades such applications have moved from an academic nicety to industrial necessity, and then regulatory requirement. However, the regulatory uptake has not been uniform and it has not taken the same path. These have been a reflection of the set up in various regulatory agencies and their breadth and depth of work-force, centralized or de-centralized nature of geographical distribution of assessors, existence or lack of internal research groups to examine multi-layer large scale models and many other factors. However, despite these operational differences, recent qualification opinion by EMA on platforms used for PBPK evaluation in the space of DDI is a significant step that heralds a general worldwide consensus for harmonization in use of these new technologies as a follow up to efforts within International Harmonization Committee in the space via publication of their M12 Guidance. Readers will get to know the journey that has taken us to this point and some forthcoming directions on expansion of applications.</div></div>","PeriodicalId":11298,"journal":{"name":"Drug Metabolism and Pharmacokinetics","volume":"66 ","pages":"Article 101514"},"PeriodicalIF":2.2,"publicationDate":"2025-12-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145911002","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-17DOI: 10.1016/j.dmpk.2025.101513
Ryosuke Watari
Coproporphyrin-I (CP-I), an endogenous biomarker for organic anion transporting polypeptide (OATP) 1B, is a critical tool for evaluating the inhibitory potential of OATP1B in humans. The final International Council for Harmonisation of Technical Requirements for Pharmaceuticals for Human Use (ICH) M12 guideline (Step 4) recognizes CP-I as a validated biomarker for this purpose. In addition, the area under the concentration–time curve (AUC) ratio and the maximum concentration (Cmax) ratio of CP-I have been used as indices to assess OATP1B inhibition, with the cutoff value set at 1.25. Because ICH M12 now describes the application of CP-I as a biomarker for evaluating the inhibitory potential of OATP1B, CP-I data are expected to be increasingly used in future new drug applications (NDAs). This review presents case studies of NDAs submitted by 2024 that incorporated CP-I to evaluate the OATP1B inhibitory potential of new molecular entities before the finalization of ICH M12 Step 4. In addition, considerations and perspectives regarding the evaluation of OATP1B inhibition using CP-I are discussed. These examples can serve as references for future applications using CP-I and the regulatory acceptance of other endogenous biomarkers, such as N1-methylnicotinamide and pyridoxic acid, as described in the ICH M12 guideline.
{"title":"Evaluation of OATP1B inhibitory potential using an endogenous biomarker coproporphyrin-I in new drug applications: Case reports submitted by 2024","authors":"Ryosuke Watari","doi":"10.1016/j.dmpk.2025.101513","DOIUrl":"10.1016/j.dmpk.2025.101513","url":null,"abstract":"<div><div>Coproporphyrin-I (CP-I), an endogenous biomarker for organic anion transporting polypeptide (OATP) 1B, is a critical tool for evaluating the inhibitory potential of OATP1B in humans. The final International Council for Harmonisation of Technical Requirements for Pharmaceuticals for Human Use (ICH) M12 guideline (Step 4) recognizes CP-I as a validated biomarker for this purpose. In addition, the area under the concentration–time curve (AUC) ratio and the maximum concentration (C<sub>max</sub>) ratio of CP-I have been used as indices to assess OATP1B inhibition, with the cutoff value set at 1.25. Because ICH M12 now describes the application of CP-I as a biomarker for evaluating the inhibitory potential of OATP1B, CP-I data are expected to be increasingly used in future new drug applications (NDAs). This review presents case studies of NDAs submitted by 2024 that incorporated CP-I to evaluate the OATP1B inhibitory potential of new molecular entities before the finalization of ICH M12 Step 4. In addition, considerations and perspectives regarding the evaluation of OATP1B inhibition using CP-I are discussed. These examples can serve as references for future applications using CP-I and the regulatory acceptance of other endogenous biomarkers, such as N<sup>1</sup>-methylnicotinamide and pyridoxic acid, as described in the ICH M12 guideline.</div></div>","PeriodicalId":11298,"journal":{"name":"Drug Metabolism and Pharmacokinetics","volume":"66 ","pages":"Article 101513"},"PeriodicalIF":2.2,"publicationDate":"2025-12-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145916681","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-12DOI: 10.1016/j.dmpk.2025.101512
Kenichi Umehara , Andrew Harrell , Chandra Prakash , Constanze Hilgendorf , T. Eric Ballard , Felix Huth , Justine Badée , Licong Jiang , Manoli Vourvahis , Natasa Pajkovic , Neil Parrott , Nilay Thakkar , Patrik Marroum , Ronald Laethem , Shiyao Xu , Yuan Chen
The ICH M12 Guidance, adopted by the International Council for Harmonisation in 2024, provides a global framework for assessing drug-drug interaction (DDI) risks mediated by metabolic enzymes and drug transporters. The DDI Discussion Group in the International Consortium for Innovation and Quality identifies key challenges in the guidance. In vitro challenges include accounting for protein binding, mitigating overestimations of DDI risks, and interpreting weak enzyme inhibition or induction effects. A case study explores cytochrome P450 (CYP) induction risks by major metabolites. The complexities of UDP-glucuronosyltransferase (UGT) and transporter inhibition or induction are contextualized. Clearance pathway evaluations for low turnover compounds and UGT or transporter substrates are also summarized for object DDIs. Clinically, challenges include the need for validated endogenous biomarkers to improve DDI risk assessments and finding alternatives to rifampin for CYP induction and Organic Anion Transporting polypeptide 1B (OATP1B) inhibition due to nitrosamine: reduced and non-selective induction by drugs like carbamazepine and phenytoin or non-selective OATP inhibition by cyclosporine. Further complexities involve therapeutic-protein DDIs, transporter-enzyme interplay and compounds acting as simultaneous inducers and time-dependent inhibitors. Addressing these gaps requires collaborative efforts to refine predictive models to improve in vitro-in vivo correlations, and to enhance drug development and patient safety.
{"title":"Future directions in drug-drug interaction evaluations: Industry perspective on the ICH M12 guidance","authors":"Kenichi Umehara , Andrew Harrell , Chandra Prakash , Constanze Hilgendorf , T. Eric Ballard , Felix Huth , Justine Badée , Licong Jiang , Manoli Vourvahis , Natasa Pajkovic , Neil Parrott , Nilay Thakkar , Patrik Marroum , Ronald Laethem , Shiyao Xu , Yuan Chen","doi":"10.1016/j.dmpk.2025.101512","DOIUrl":"10.1016/j.dmpk.2025.101512","url":null,"abstract":"<div><div>The ICH M12 Guidance, adopted by the International Council for Harmonisation in 2024, provides a global framework for assessing drug-drug interaction (DDI) risks mediated by metabolic enzymes and drug transporters. The DDI Discussion Group in the International Consortium for Innovation and Quality identifies key challenges in the guidance. In vitro challenges include accounting for protein binding, mitigating overestimations of DDI risks, and interpreting weak enzyme inhibition or induction effects. A case study explores cytochrome P450 (CYP) induction risks by major metabolites. The complexities of UDP-glucuronosyltransferase (UGT) and transporter inhibition or induction are contextualized. Clearance pathway evaluations for low turnover compounds and UGT or transporter substrates are also summarized for object DDIs. Clinically, challenges include the need for validated endogenous biomarkers to improve DDI risk assessments and finding alternatives to rifampin for CYP induction and Organic Anion Transporting polypeptide 1B (OATP1B) inhibition due to nitrosamine: reduced and non-selective induction by drugs like carbamazepine and phenytoin or non-selective OATP inhibition by cyclosporine. Further complexities involve therapeutic-protein DDIs, transporter-enzyme interplay and compounds acting as simultaneous inducers and time-dependent inhibitors. Addressing these gaps requires collaborative efforts to refine predictive models to improve in vitro-in vivo correlations, and to enhance drug development and patient safety.</div></div>","PeriodicalId":11298,"journal":{"name":"Drug Metabolism and Pharmacokinetics","volume":"66 ","pages":"Article 101512"},"PeriodicalIF":2.2,"publicationDate":"2025-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145911074","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-09DOI: 10.1016/j.dmpk.2025.101510
Viktor Georgiev , Isabelle Anderka , Delia Bucher , Lena Preiss , Jitao David Zhang , Kenichi Umehara , Neil Parrott
This review focuses on use of in vitro data and physiologically based pharmacokinetic (PBPK) modeling to predict disease-drug and therapeutic-protein-drug interactions for Cytochrome P450 CYP substrates mediated by interleukin-6 (IL-6). We review current understanding of the mechanisms of inflammatory IL-6 release (both with and without drug treatment), and provide an overview of the in vitro models for assessing CYP suppression by IL-6. Furthermore, past applications and current status of PBPK modeling in this context were comprehensively reviewed. We then highlight a recently published, more mechanistic PBPK model that treats IL-6 as a therapeutic protein and links CYP suppression to the IL-6-receptor complex concentration in the liver and gut interstitial spaces. This new model demonstrates good predictive performance across various patient populations and is able to simulate clinical outcomes based on a mechanistic pharmacokinetic model integrating known IL-6 receptor biology. Therefore we anticipate increased impact on regulatory decisions. However, gaps remain in understanding IL-6 kinetics and the translation of in vitro data to in vivo predictions and we suggest that further progress will be made by applying mechanistic modeling to guide future experimental work and generate a better understanding of IL-6's influence on co-administered small molecule drugs.
{"title":"Current status of prediction of IL-6 mediated cytochrome P450 activity modulation using in vitro data and PBPK modeling","authors":"Viktor Georgiev , Isabelle Anderka , Delia Bucher , Lena Preiss , Jitao David Zhang , Kenichi Umehara , Neil Parrott","doi":"10.1016/j.dmpk.2025.101510","DOIUrl":"10.1016/j.dmpk.2025.101510","url":null,"abstract":"<div><div>This review focuses on use of in vitro data and physiologically based pharmacokinetic (PBPK) modeling to predict disease-drug and therapeutic-protein-drug interactions for Cytochrome P450 CYP substrates mediated by interleukin-6 (IL-6). We review current understanding of the mechanisms of inflammatory IL-6 release (both with and without drug treatment), and provide an overview of the in vitro models for assessing CYP suppression by IL-6. Furthermore, past applications and current status of PBPK modeling in this context were comprehensively reviewed. We then highlight a recently published, more mechanistic PBPK model that treats IL-6 as a therapeutic protein and links CYP suppression to the IL-6-receptor complex concentration in the liver and gut interstitial spaces. This new model demonstrates good predictive performance across various patient populations and is able to simulate clinical outcomes based on a mechanistic pharmacokinetic model integrating known IL-6 receptor biology. Therefore we anticipate increased impact on regulatory decisions. However, gaps remain in understanding IL-6 kinetics and the translation of in vitro data to in vivo predictions and we suggest that further progress will be made by applying mechanistic modeling to guide future experimental work and generate a better understanding of IL-6's influence on co-administered small molecule drugs.</div></div>","PeriodicalId":11298,"journal":{"name":"Drug Metabolism and Pharmacokinetics","volume":"66 ","pages":"Article 101510"},"PeriodicalIF":2.2,"publicationDate":"2025-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145916449","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-08DOI: 10.1016/j.dmpk.2025.101511
Nina Isoherranen
Since the publication of the metabolites in safety testing (MIST) guidance by the US FDA in 2009, there has been continuous interest and expansion in research aimed at predicting and characterizing circulating metabolites. Several systematic reviews and original research articles have been published to assess the role of metabolites in drug-drug interactions. Abundant circulating metabolites have been found to be common with classic cytochrome P450 (CYP) enzyme inhibitors and with new drugs in development. This has raised the need for better tools to predict significant circulating metabolites from preclinical data to streamline metabolite testing. This review summarizes the current recommendations for metabolite testing, evaluates the existing data on reversible and time-dependent inhibition of CYP enzymes by circulating metabolites, and explores the potential inhibition of drug transporters by circulating metabolites. The possible role of metabolites in induction of CYP enzymes is also discussed. The mathematical methods to incorporate multiple precipitants into risk assessment and quantitative prediction methods for inhibition and induction are summarized. Finally, the unique considerations regarding PBPK modeling of metabolites are discussed to highlight potential differences in the metabolite liver concentrations used in static versus more dynamic PBPK prediction methods.
{"title":"Role of metabolites in drug-drug interactions","authors":"Nina Isoherranen","doi":"10.1016/j.dmpk.2025.101511","DOIUrl":"10.1016/j.dmpk.2025.101511","url":null,"abstract":"<div><div>Since the publication of the metabolites in safety testing (MIST) guidance by the US FDA in 2009, there has been continuous interest and expansion in research aimed at predicting and characterizing circulating metabolites. Several systematic reviews and original research articles have been published to assess the role of metabolites in drug-drug interactions. Abundant circulating metabolites have been found to be common with classic cytochrome P450 (CYP) enzyme inhibitors and with new drugs in development. This has raised the need for better tools to predict significant circulating metabolites from preclinical data to streamline metabolite testing. This review summarizes the current recommendations for metabolite testing, evaluates the existing data on reversible and time-dependent inhibition of CYP enzymes by circulating metabolites, and explores the potential inhibition of drug transporters by circulating metabolites. The possible role of metabolites in induction of CYP enzymes is also discussed. The mathematical methods to incorporate multiple precipitants into risk assessment and quantitative prediction methods for inhibition and induction are summarized. Finally, the unique considerations regarding PBPK modeling of metabolites are discussed to highlight potential differences in the metabolite liver concentrations used in static versus more dynamic PBPK prediction methods.</div></div>","PeriodicalId":11298,"journal":{"name":"Drug Metabolism and Pharmacokinetics","volume":"66 ","pages":"Article 101511"},"PeriodicalIF":2.2,"publicationDate":"2025-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145911050","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-01DOI: 10.1016/j.dmpk.2025.101504
Tomoyuki Kawachi , Tatsuki Fukami , Miki Nakajima
Drug-induced liver injury often arises from reactive metabolites (RMs) produced in the liver, making it crucial to assess RM formation rates from drug candidates. Conventional assays using glutathione (GSH) effectively trap soft electrophilic RMs but fail to detect hard electrophiles. To address this, we developed a double trapping assay employing [3H]GSH and [14C]cyanide as soft and hard nucleophilic reagents, respectively. This assay was applied to 25 drugs chosen based on safety profiles. Eight drugs were exclusively trapped by [3H]GSH, while 11 were trapped by [14C]cyanide or both reagents, demonstrating that a double trapping assay provides a more comprehensive detection method for both soft and hard RMs. Multiplying RM formation rates by daily doses allowed almost complete differentiation between withdrawn/black boxed warning drugs and safer ones. Radio-LCMS analysis provided detailed insights into the substructures of drug candidates responsible for RM production. Interestingly, it was discovered that GSH-based assays sometimes fail to detect certain RMs due to the presence of dithiothreitol in commercial [3H]GSH. This study highlights the efficacy of the double trapping assay using [3H]GSH and [14C]cyanide in accurately and comprehensively detecting RMs. Furthermore, it offers valuable structural information to minimize RM formation during early drug discovery.
{"title":"A novel quantitative assessment of formed reactive metabolites by double trapping with [3H]glutathione and [14C]cyanide","authors":"Tomoyuki Kawachi , Tatsuki Fukami , Miki Nakajima","doi":"10.1016/j.dmpk.2025.101504","DOIUrl":"10.1016/j.dmpk.2025.101504","url":null,"abstract":"<div><div>Drug-induced liver injury often arises from reactive metabolites (RMs) produced in the liver, making it crucial to assess RM formation rates from drug candidates. Conventional assays using glutathione (GSH) effectively trap soft electrophilic RMs but fail to detect hard electrophiles. To address this, we developed a double trapping assay employing [<sup>3</sup>H]GSH and [<sup>14</sup>C]cyanide as soft and hard nucleophilic reagents, respectively. This assay was applied to 25 drugs chosen based on safety profiles. Eight drugs were exclusively trapped by [<sup>3</sup>H]GSH, while 11 were trapped by [<sup>14</sup>C]cyanide or both reagents, demonstrating that a double trapping assay provides a more comprehensive detection method for both soft and hard RMs. Multiplying RM formation rates by daily doses allowed almost complete differentiation between withdrawn/black boxed warning drugs and safer ones. Radio-LCMS analysis provided detailed insights into the substructures of drug candidates responsible for RM production. Interestingly, it was discovered that GSH-based assays sometimes fail to detect certain RMs due to the presence of dithiothreitol in commercial [<sup>3</sup>H]GSH. This study highlights the efficacy of the double trapping assay using [<sup>3</sup>H]GSH and [<sup>14</sup>C]cyanide in accurately and comprehensively detecting RMs. Furthermore, it offers valuable structural information to minimize RM formation during early drug discovery.</div></div>","PeriodicalId":11298,"journal":{"name":"Drug Metabolism and Pharmacokinetics","volume":"65 ","pages":"Article 101504"},"PeriodicalIF":2.2,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145667631","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-26DOI: 10.1016/j.dmpk.2025.101509
Trevor N. Johnson , Jean Dinh , Roz Southall , Amin Rostami-Hodjegan
Many drug-drug interactions (DDIs) in the pediatric population are managed based on data generated in adults, however this is done with little clinical evidence and the assumption of DDIs being similar between adults and pediatric may not be correct. Physiologically Based Pharmacokinetic models have been used extensively to predict DDIs in adults and this evidence is now being accepted by regulators worldwide and in certain cases information from PBPK is feeding directly into the drug labels. Because pediatric PBPK models account for age related changes in physiology and biochemistry they are ideally placed to extrapolate DDI liability from adults to children. However, marrying together all relevant system factors such as ontogeny of enzymes and hepatic blood flow with drug related factors e.g. extraction ratio and fraction unbound is important and is an active area of research. This review will highlight the need for dynamic rather than static PBPK pediatric DDI predictions with a view to recommending the best practice approach.
{"title":"The rational use of PBPK to assess the changing DDI liability in pediatrics: Model qualification and the move towards best practice","authors":"Trevor N. Johnson , Jean Dinh , Roz Southall , Amin Rostami-Hodjegan","doi":"10.1016/j.dmpk.2025.101509","DOIUrl":"10.1016/j.dmpk.2025.101509","url":null,"abstract":"<div><div>Many drug-drug interactions (DDIs) in the pediatric population are managed based on data generated in adults, however this is done with little clinical evidence and the assumption of DDIs being similar between adults and pediatric may not be correct. Physiologically Based Pharmacokinetic models have been used extensively to predict DDIs in adults and this evidence is now being accepted by regulators worldwide and in certain cases information from PBPK is feeding directly into the drug labels. Because pediatric PBPK models account for age related changes in physiology and biochemistry they are ideally placed to extrapolate DDI liability from adults to children. However, marrying together all relevant system factors such as ontogeny of enzymes and hepatic blood flow with drug related factors e.g. extraction ratio and fraction unbound is important and is an active area of research. This review will highlight the need for dynamic rather than static PBPK pediatric DDI predictions with a view to recommending the best practice approach.</div></div>","PeriodicalId":11298,"journal":{"name":"Drug Metabolism and Pharmacokinetics","volume":"66 ","pages":"Article 101509"},"PeriodicalIF":2.2,"publicationDate":"2025-11-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145916748","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-11-10DOI: 10.1016/j.dmpk.2025.101508
Elaine Tseng, R. Scott Obach
Cytochrome P450 reaction phenotyping refers to the in vitro experimental approach that estimates the quantitative contributions of individual P450 enzymes to the metabolism of a drug. Methods for this are well-established and have existed for over three decades and include the use of selective inhibitors, individually expressed P450 enzymes, and human-derived in vitro systems such as liver microsomes and hepatocytes. The results from P450 reaction phenotyping experiments are used to inform patient safety, clinical trial designs, and physiologically-based pharmacokinetic models, and this information is an expectation from government regulatory authorities when developing a new drug candidate. Despite widespread use, P450 reaction phenotyping methods possess shortcomings. These include sub-optimal selectivity of P450 inhibitors, scaling factors that can differ among substrates, challenges measuring low turnover substrates, and considerations of non-P450 routes of drug clearance (e.g. active transport, other drug metabolizing enzyme families). A recently described “sequential qualitative-then-quantitative” approach to P450 reaction phenotyping is described along with a more comprehensive experimental design that considers incomplete selectivity of P450 inhibitors. This approach addresses some of the aforementioned shortcomings, however it is still important to consider the contribution of P450 enzymes to the overall dispositional profile that is obtained from in vivo studies, such as radiolabel human absorption/distribution/metabolism/excretion (ADME) studies.
{"title":"Cytochrome P450 reaction phenotyping: State of the art","authors":"Elaine Tseng, R. Scott Obach","doi":"10.1016/j.dmpk.2025.101508","DOIUrl":"10.1016/j.dmpk.2025.101508","url":null,"abstract":"<div><div>Cytochrome P450 reaction phenotyping refers to the in vitro experimental approach that estimates the quantitative contributions of individual P450 enzymes to the metabolism of a drug. Methods for this are well-established and have existed for over three decades and include the use of selective inhibitors, individually expressed P450 enzymes, and human-derived in vitro systems such as liver microsomes and hepatocytes. The results from P450 reaction phenotyping experiments are used to inform patient safety, clinical trial designs, and physiologically-based pharmacokinetic models, and this information is an expectation from government regulatory authorities when developing a new drug candidate. Despite widespread use, P450 reaction phenotyping methods possess shortcomings. These include sub-optimal selectivity of P450 inhibitors, scaling factors that can differ among substrates, challenges measuring low turnover substrates, and considerations of non-P450 routes of drug clearance (e.g. active transport, other drug metabolizing enzyme families). A recently described “sequential qualitative-then-quantitative” approach to P450 reaction phenotyping is described along with a more comprehensive experimental design that considers incomplete selectivity of P450 inhibitors. This approach addresses some of the aforementioned shortcomings, however it is still important to consider the contribution of P450 enzymes to the overall dispositional profile that is obtained from in vivo studies, such as radiolabel human absorption/distribution/metabolism/excretion (ADME) studies.</div></div>","PeriodicalId":11298,"journal":{"name":"Drug Metabolism and Pharmacokinetics","volume":"66 ","pages":"Article 101508"},"PeriodicalIF":2.2,"publicationDate":"2025-11-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145911059","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}