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Exploring the multifaceted bioactivities of silver nanoparticles synthesized from red algae Hypnea pannosa: Antimicrobial, antibiofilm, and insecticidal potentials 探索由红藻合成的银纳米颗粒的多方面生物活性:抗菌、抗生物膜和杀虫潜力
IF 2.3 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-03-01 DOI: 10.1016/j.ejbt.2024.12.001
Mansour A.E. Bashar , Enas M.H. Attia , Alsayed E. Mekky , Tharwat A. Selim , Walaa M. Shaban , Mohamed A.M. El-Tabakh , Ammar.M. Mahmoud , Mostafa A. Abdel-Maksoud , Ali A. Ali , Mohamed A. El-Tayeb , Waleed B. Suleiman , Mohamed E. El Beeh , Sabiha Fatima , Bushra Hafeez Kiani , Nehal M. Khairy , Ebrahim Saied

Background

The emergence of microbial resistance to conventional antibiotics and the environmental impact of chemical pesticides necessitates the search for alternative and sustainable solutions. This study explores the utilization of the dried biomass of the red algae Hypnea pannosa to synthesize silver nanoparticles (AgNPs) using a green and eco-friendly method.

Results

The synthesized AgNPs displayed sizes ranging from 15 to 60 nm with polydispersed shapes and a face-centered cubic crystalline structure, confirmed through characterization techniques including transmission electron microscopy (TEM), dynamic light scattering (DLS), and X-ray diffraction (XRD). Stability assessments via zeta potential measurements and docking studies of oleic acid and 9,12-octadecadienoic acid against Gyrase B and GST proteins were also conducted. The nanoparticles demonstrated potent antibacterial and antibiofilm activities, particularly against Staphylococcus epidermidis. Both the algal extract and the AgNPs exhibited significant larvicidal and adulticidal effects against Culex pipiens, with the nanoparticles showing superior efficacy, indicated by lower LC50 and LC90 values. The highest larvicidal effectiveness achieved was 93.33% for algal extract at 600 mg/L and 100% for AgNPs at 100 mg/L.

Conclusions

This study provides a sustainable method for producing AgNPs with diverse applications in medical and mosquito control fields, highlighting their potential as effective and safe alternatives to conventional antibacterial and insecticidal agents.
How to cite: Bashar MA, Attia EM, Mekky AE, et al. Exploring the multifaceted bioactivities of silver nanoparticles synthesized from red algae Hypnea pannosa: Antimicrobial, antibiofilm, and insecticidal potentials. Electron J Biotechnol 2025;74. https://doi.org/10.1016/j.ejbt.2024.12.001.
微生物对常规抗生素的耐药性和化学农药对环境的影响的出现,要求寻找替代和可持续的解决方案。本研究探索了利用红藻的干燥生物量,利用绿色环保的方法合成纳米银粒子(AgNPs)。结果通过透射电子显微镜(TEM)、动态光散射(DLS)和x射线衍射(XRD)等表征技术证实,合成的AgNPs尺寸在15 ~ 60 nm之间,具有多分散形状和面心立方晶体结构。通过zeta电位测量和油酸和9,12-十八二烯酸对Gyrase B和GST蛋白的对接研究进行了稳定性评估。纳米颗粒表现出强大的抗菌和抗生物膜活性,特别是对表皮葡萄球菌。藻类提取物和AgNPs对淡库蚊均有显著的杀幼虫和杀成虫效果,其中纳米颗粒的LC50和LC90值较低,效果更佳。600 mg/L海藻提取物和100 mg/L AgNPs的最高杀虫率分别为93.33%和100%。结论本研究提供了一种可持续生产AgNPs的方法,在医疗和防蚊领域具有广泛的应用,突出了其作为传统抗菌和杀虫剂的有效和安全替代品的潜力。引用方式:Bashar MA, Attia EM, Mekky AE等。探索由红藻合成的银纳米颗粒的多方面生物活性:抗菌、抗生物膜和杀虫潜力。中国生物医学工程学报(英文版);2009;34。https://doi.org/10.1016/j.ejbt.2024.12.001。
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引用次数: 0
Green synthesis of silver nanoparticles using Viola odorata and Onosma hispidum: Evaluation of their antimicrobial, antioxidant, and hemolytic properties against multidrug-resistant microbes 绿色合成银纳米粒子的紫堇和紫堇:对多重耐药微生物的抗菌、抗氧化和溶血性能的评价
IF 2.3 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-03-01 DOI: 10.1016/j.ejbt.2024.12.003
Aneeta Andleeb , Aneeza Khalid , Sadia Khalil , Hammad Arshad , Saima Sadaf

Background

Rapid increase in antimicrobial resistance poses a significant threat to global health, necessitating alternative strategies to combat multi-drug resistant (MDR) pathogens. Advances in nanobiotechnology may offer promising solutions to this pressing issue. This study revolves around developing an efficient method for synthesizing silver nanoparticles (AgNPs) based on aqueous extracts of Viola odorata leaves (VoL) and Onosma hispidum root barks (OhRb), traditional medicinal perennial herbs, followed by evaluating their antioxidant and antimicrobial potential against MDR pathogens.

Results

The synthesis of nanoparticles was completed in 15–20 min at 55–60°C using green approach. The characterized AgNPs showed significant antimicrobial activity against Escherichia coli, Pseudomonas aeruginosa, Klebsiella pneumoniae, Staphylococcus aureus, Streptococcus agalactiae, and Candida albicans, with zones of inhibition ranging from 12 mm ± 0.636 to 25 mm ± 0.282. Minimum inhibitory concentration and minimum bactericidal concentrations ranged from 0.39 to 6.125 µg/mL. Additionally, the nanoparticles demonstrated significant antioxidant potential compared to the aqueous plant extracts. Importantly, the investigation into the effects of the nanoparticles on red blood cells revealed no pronounced hemolysis even at higher concentrations (300 µg/mL) of VoL-AgNPs and OhRb-AgNPs, demonstrating their biocompatibility and hemolytic safety profile.

Conclusions

The VoL-AgNPs and OhRb-AgNPs exhibit appreciable antimicrobial and antioxidant activities with minimal hemolysis, underscoring their potential to combat MDR pathogens, and further applicability in therapeutic settings. However, in vivo studies are warranted to explore their biomedical applications, such as in wound dressings and treatments for disorders caused by free radical damage.
How to cite: Andleeb A, Khalid A, Khalil S, et al. Green synthesis of silver nanoparticles using Viola odorata and Onosma hispidum: Evaluation of their antimicrobial, antioxidant, and hemolytic properties against multidrug resistant microbes. Electron J Biotechnol 2025;74. https://doi.org/10.1016/j.ejbt.2024.12.003.
背景抗菌素耐药性的迅速增加对全球健康构成重大威胁,需要采取替代战略来对抗耐多药(MDR)病原体。纳米生物技术的进步可能为这一紧迫问题提供有希望的解决方案。本研究以传统多年生草本植物Viola odorata叶片(VoL)和Onosma hispidum根皮(OhRb)为原料,建立了一种高效合成银纳米颗粒(AgNPs)的方法,并对其抗多药耐药病原菌的抗氧化和抗菌能力进行了评价。结果在55 ~ 60℃条件下,采用绿色途径,15 ~ 20 min完成纳米颗粒的合成。所得AgNPs对大肠埃希菌、铜绿假单胞菌、肺炎克雷伯菌、金黄色葡萄球菌、无乳链球菌和白色念珠菌均有显著的抑菌活性,抑菌范围为12 mm±0.636 ~ 25 mm±0.282。最小抑菌浓度和最小杀菌浓度范围为0.39 ~ 6.125µg/mL。此外,与水提取物相比,纳米颗粒显示出显著的抗氧化潜力。重要的是,对纳米颗粒对红细胞影响的研究显示,即使在更高浓度(300 μ g/mL)的VoL-AgNPs和OhRb-AgNPs下,也没有明显的溶血现象,证明了它们的生物相容性和溶血安全性。结论VoL-AgNPs和OhRb-AgNPs表现出明显的抗菌和抗氧化活性,且溶血最小,强调了它们在对抗耐多药病原体方面的潜力,并进一步适用于治疗环境。然而,有必要进行体内研究以探索其生物医学应用,例如伤口敷料和自由基损伤引起的疾病的治疗。如何引用:Andleeb A, Khalid A, Khalil S等。绿色合成银纳米粒子的紫堇和紫堇:对多重耐药微生物的抗菌、抗氧化和溶血性能的评价。中国生物医学工程学报(英文版);2009;34。https://doi.org/10.1016/j.ejbt.2024.12.003。
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引用次数: 0
Antioxidant, and enzyme inhibition effects of chia (Salvia hispanica) seed oil: A comprehensive phytochemical screening using LC-HR/MS 鼠尾草籽油抗氧化和酶抑制作用:LC-HR/MS综合植物化学筛选
IF 2.3 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-03-01 DOI: 10.1016/j.ejbt.2024.12.002
Muzaffer Mutlu , Zeynebe Bingol , Eda Mehtap Ozden , Ekrem Köksal , Adem Erturk , Ahmet C. Goren , Saleh Alwasel , İlhami Gulcin

Background

In this study, the antioxidant and anti-Alzheimer's disease properties of Chia (Salvia hispanica) seed oil (CSO) were determined for the first time. Three different metal reduction and two different radical scavenging methods were used to determine the antioxidant properties of CSO. It exhibited higher antioxidant activity than vitamins E and C in the CUPRAC method.

Results

CSO has shown excellent efficacy in the antioxidant methods used in this study. In the DPPH radical scavenging method, CSO exhibited higher radical scavenging potential than BHT, a standard and synthetic antioxidant. The anti-Alzheimer's disease properties of CSO were determined by inhibition of acetylcholinesterase enzyme and its IC50 value (17.60 µg/mL) was found to be close to the IC50 value of tacrine (8.82 µg/mL), the standard inhibitor of the enzyme. Inhibition properties of α-glycosidase enzyme and human carbonic anhydrase II isoenzymes were also studied. It was understood that CSO inhibited both enzymes at a lower rate than standard inhibitors. Also, the total phenolic and flavonoid contents of CSO were determined as 784.44 µg gallic acid equivalent (GAE)/mL oil and quercetin 150.00 µg QE)/mL oil, respectively. In addition, LC-HRMS chromatography application was performed to understand the phenolic content of CSO. It was determined that isosakuranetin (29.07 mg/L oil) was the most abundant polyphenolic compound in CSA. Also, seven polyphenolics of the studied remained below the detectable amount.

Conclusions

It was found that CSO had effective antioxidant activity, polyphenolic contents and potent enzyme inhibition properties, associated with some global disease.
How to cite: Mutlu M, Bingol Z, Ozden EM, et al. Antioxidant, and enzyme inhibition effects of chia (Salvia hispanica) seed oil: A comprehensive phytochemical screening using LC-HR/MS. Electron J Biotechnol 2025;74. https://doi.org/10.1016/j.ejbt.2024.12.002.
本研究首次测定了鼠尾草籽油(CSO)的抗氧化和抗阿尔茨海默病的作用。采用三种不同的金属还原法和两种不同的自由基清除法测定了CSO的抗氧化性能。在CUPRAC法中,其抗氧化活性高于维生素E和C。结果scso在本研究所采用的抗氧化方法中表现出优异的抗氧化效果。在DPPH自由基清除方法中,CSO比标准抗氧化剂BHT具有更高的自由基清除能力。通过抑制乙酰胆碱酯酶测定CSO的抗阿尔茨海默病特性,发现其IC50值(17.60µg/mL)接近该酶的标准抑制剂他克林的IC50值(8.82µg/mL)。并对α-糖苷酶和人碳酸酐酶ⅱ同工酶的抑制作用进行了研究。据了解,CSO对这两种酶的抑制率低于标准抑制剂。结果表明,总酚和总黄酮含量分别为784.44µg没食子酸当量(GAE)/mL油和150.00µg槲皮素当量(QE)/mL油。此外,采用LC-HRMS色谱法了解了CSO中酚类物质的含量。结果表明,异樱草素(29.07 mg/L油)是CSA中含量最高的多酚类化合物。此外,研究中的7种多酚仍低于可检测的量。结论CSO具有较强的抗氧化活性、多酚含量和较强的酶抑制作用,与某些全球性疾病有关。引用方式:Mutlu M, Bingol Z, Ozden EM等。鼠尾草籽油抗氧化和酶抑制作用:LC-HR/MS综合植物化学筛选中国生物医学工程学报(英文版);2009;34。https://doi.org/10.1016/j.ejbt.2024.12.002。
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引用次数: 0
Dr. Rodolfo Quintero Ramírez (21/07/1947–08/12/2024) 鲁道夫·金特罗博士ramirez (21/07/1947 - 08/12/2024)
IF 2.3 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-03-01 DOI: 10.1016/j.ejbt.2025.03.001
Agustin López Munguía
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引用次数: 0
Whole-transcriptome analysis reveals the characteristics of intramuscular fat circRNA expression and its associated network in grazing yaks of different months of age under cold stress 全转录组分析揭示了不同月龄放牧牦牛在冷应激条件下肌内脂肪环状rna的表达特征及其相关网络
IF 2.3 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-01-09 DOI: 10.1016/j.ejbt.2024.10.004
Yaqian Liu, Yonggang Sun, Yincang Han, Weiqin Ding, Shengwei Jin, Jianyu Chen, Fajie Gou

Background

The aim of this study was to screen circRNAs related to fat deposition in yaks, and to identify candidate circRNAs for yak meat quality improvement. Six male yaks with insignificant differences in body weights were selected as test subjects, and 3 yaks (G18_IMF) were randomly slaughtered at the beginning of the experiment, while the remaining 3 yaks were naturally grazed until 24 months of age (G24_IMF), and then slaughtered at the end of the experiment, and the intramuscular fat was collected from the dorsal muscle. At the end of the experiment, the yaks were slaughtered and the intramuscular fat from the back was collected for whole transcriptome sequencing.

Results

The results showed that 352 differential circRNAs, 86 differential miRNAs and 3981 differential mRNAs were found. miRNAs and mRNAs network regulation maps were successfully constructed through gene expression correlation analysis and target gene prediction.

Conclusions

Taking the intersection of the predicted circRNA target genes with the differential miRNAs for intramuscular fat in yaks of different months of age, we obtained two candidate ceRNA pairs that might be related to intramuscular fat deposition in yaks, and found that bta-let-7i might be related to fat deposition in yaks and might be regulated by X_85287959_85291068, and that X_85287959_85291068 could be a candidate circRNA to enhance the quality of yak meat. The results may provide a reference for further investigation of the regulatory network of intramuscular fat deposition in yak.
How to cite: Liu Y, Sun Y, Han Y, et al. Whole-transcriptome analysis reveals the characteristics of intramuscular fat circRNA expression and its associated network in grazing yaks of different months of age under cold stress. Electron J Biotechnol 2025;74. https://doi.org/10.1016/j.ejbt.2024.10.004.
本研究的目的是筛选与牦牛脂肪沉积相关的环状rna,并鉴定用于改善牦牛肉质的候选环状rna。选取6头体重差异不显著的公牦牛作为试验对象,试验开始时随机屠宰3头(G18_IMF),剩余3头自然放牧至24月龄(G24_IMF),试验结束后屠宰,并采集背肌肌内脂肪。试验结束后屠宰牦牛,采集牦牛背部肌内脂肪,进行全转录组测序。结果共发现352个差异circrna、86个差异mirna和3981个差异mrna。通过基因表达相关性分析和靶基因预测,成功构建miRNAs和mrna网络调控图谱。结论将预测的circRNA靶基因与不同月龄牦牛肌内脂肪差异mirna进行交叉比对,得到了两对可能与牦牛肌内脂肪沉积相关的候选ceRNA,发现bta-let-7i可能与牦牛肌内脂肪沉积有关,且可能受X_85287959_85291068调控,X_85287959_85291068可能是提高牦牛肉质质的候选circRNA。该结果可为进一步研究牦牛肌内脂肪沉积的调控网络提供参考。引用方式:刘毅,孙毅,韩毅,等。全转录组分析揭示了不同月龄放牧牦牛在冷应激条件下肌内脂肪环状rna的表达特征及其相关网络。中国生物医学工程学报(英文版);2009;34。https://doi.org/10.1016/j.ejbt.2024.10.004。
{"title":"Whole-transcriptome analysis reveals the characteristics of intramuscular fat circRNA expression and its associated network in grazing yaks of different months of age under cold stress","authors":"Yaqian Liu,&nbsp;Yonggang Sun,&nbsp;Yincang Han,&nbsp;Weiqin Ding,&nbsp;Shengwei Jin,&nbsp;Jianyu Chen,&nbsp;Fajie Gou","doi":"10.1016/j.ejbt.2024.10.004","DOIUrl":"10.1016/j.ejbt.2024.10.004","url":null,"abstract":"<div><h3>Background</h3><div>The aim of this study was to screen circRNAs related to fat deposition in yaks, and to identify candidate circRNAs for yak meat quality improvement. Six male yaks with insignificant differences in body weights were selected as test subjects, and 3 yaks (G18_IMF) were randomly slaughtered at the beginning of the experiment, while the remaining 3 yaks were naturally grazed until 24 months of age (G24_IMF), and then slaughtered at the end of the experiment, and the intramuscular fat was collected from the dorsal muscle. At the end of the experiment, the yaks were slaughtered and the intramuscular fat from the back was collected for whole transcriptome sequencing.</div></div><div><h3>Results</h3><div>The results showed that 352 differential circRNAs, 86 differential miRNAs and 3981 differential mRNAs were found. miRNAs and mRNAs network regulation maps were successfully constructed through gene expression correlation analysis and target gene prediction.</div></div><div><h3>Conclusions</h3><div>Taking the intersection of the predicted circRNA target genes with the differential miRNAs for intramuscular fat in yaks of different months of age, we obtained two candidate ceRNA pairs that might be related to intramuscular fat deposition in yaks, and found that bta-let-7i might be related to fat deposition in yaks and might be regulated by X_85287959_85291068, and that X_85287959_85291068 could be a candidate circRNA to enhance the quality of yak meat. The results may provide a reference for further investigation of the regulatory network of intramuscular fat deposition in yak.</div><div><strong>How to cite:</strong> Liu Y, Sun Y, Han Y, et al. Whole-transcriptome analysis reveals the characteristics of intramuscular fat circRNA expression and its associated network in grazing yaks of different months of age under cold stress. Electron J Biotechnol 2025;74. <span><span>https://doi.org/10.1016/j.ejbt.2024.10.004</span><svg><path></path></svg></span>.</div></div>","PeriodicalId":11529,"journal":{"name":"Electronic Journal of Biotechnology","volume":"74 ","pages":"Pages 11-18"},"PeriodicalIF":2.3,"publicationDate":"2025-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143284229","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Network pharmacology and experimental verification reveal the mechanism of Qingfei Tongluo mixture in treating pulmonary fibrosis 网络药理学和实验验证揭示清肺通络合剂治疗肺纤维化的作用机制
IF 2.3 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-01-01 DOI: 10.1016/j.ejbt.2024.10.002
Ying Zhou , Wenlong Wang , Wanping Zhu , Tingting Cai , Nannan Wang , Xia Liu , Wenmin Wang , Kequn Chai

Background

Pulmonary fibrosis (PF) is a chronic interstitial lung disease posing significant health risks. This study aimed to investigate the therapeutic mechanism of Qingfei Tongluo mixture (QTm) in treating PF by combining network pharmacology and experimental verification.

Results

A total of 246 active ingredients in QTm were identified, with 159 potential targets for PF treatment. Quercetin, a key active ingredient, was associated with the TGF-β1 signaling pathway. Gene Ontology and KEGG enrichment analyses identified 42 core genes, with a notable implication of the TGF-beta signaling pathway in PF. Immunohistochemistry showed elevated FTO and TGF-β1 levels in PF tissues. Animal experiments demonstrated that QTm improved alveolar structure, reduced interstitial lesions, and enhanced lung function while decreasing hydroxyproline content and the expression of FTO and TGF-β1 proteins.

Conclusions

QTm may inhibit PF progression by suppressing FTO/TGF-β1 expression, thereby improving lung function. These findings suggest that QTm holds potential as a treatment for PF.
How to cite: Zhou Y, Wang W, Zhu W, et al. Network pharmacology and experimental verification reveal the mechanism of Qingfei Tongluo mixture in treating pulmonary fibrosis. Electron J Biotechnol 2025;73. https://doi.org/10.1016/j.ejbt.2024.10.002.
肺纤维化(PF)是一种慢性间质性肺疾病,具有重大的健康风险。本研究旨在通过网络药理学和实验验证相结合的方法,探讨清肺通络合剂治疗PF的作用机制。结果共鉴定出246种有效成分,其中潜在靶点159种。槲皮素是一种关键活性成分,与TGF-β1信号通路相关。基因本体和KEGG富集分析鉴定出42个核心基因,与PF中TGF-β信号通路相关,免疫组化显示PF组织中FTO和TGF-β1水平升高。动物实验表明,QTm改善肺泡结构,减少间质病变,增强肺功能,降低羟脯氨酸含量,降低FTO和TGF-β1蛋白的表达。结论sqtm可能通过抑制FTO/TGF-β1的表达来抑制PF的进展,从而改善肺功能。这些发现表明,QTm有可能作为一种治疗前列腺癌的方法。引用本文:周颖,王伟,朱伟等。网络药理学和实验验证揭示清肺通络合剂治疗肺纤维化的作用机制。中国生物医学工程学报(英文版);2009;73。https://doi.org/10.1016/j.ejbt.2024.10.002。
{"title":"Network pharmacology and experimental verification reveal the mechanism of Qingfei Tongluo mixture in treating pulmonary fibrosis","authors":"Ying Zhou ,&nbsp;Wenlong Wang ,&nbsp;Wanping Zhu ,&nbsp;Tingting Cai ,&nbsp;Nannan Wang ,&nbsp;Xia Liu ,&nbsp;Wenmin Wang ,&nbsp;Kequn Chai","doi":"10.1016/j.ejbt.2024.10.002","DOIUrl":"10.1016/j.ejbt.2024.10.002","url":null,"abstract":"<div><h3>Background</h3><div>Pulmonary fibrosis (PF) is a chronic interstitial lung disease posing significant health risks. This study aimed to investigate the therapeutic mechanism of Qingfei Tongluo mixture (QTm) in treating PF by combining network pharmacology and experimental verification.</div></div><div><h3>Results</h3><div>A total of 246 active ingredients in QTm were identified, with 159 potential targets for PF treatment. Quercetin, a key active ingredient, was associated with the TGF-β1 signaling pathway. Gene Ontology and KEGG enrichment analyses identified 42 core genes, with a notable implication of the TGF-beta signaling pathway in PF. Immunohistochemistry showed elevated FTO and TGF-β1 levels in PF tissues. Animal experiments demonstrated that QTm improved alveolar structure, reduced interstitial lesions, and enhanced lung function while decreasing hydroxyproline content and the expression of FTO and TGF-β1 proteins.</div></div><div><h3>Conclusions</h3><div>QTm may inhibit PF progression by suppressing FTO/TGF-β1 expression, thereby improving lung function. These findings suggest that QTm holds potential as a treatment for PF.</div><div><strong>How to cite:</strong> Zhou Y, Wang W, Zhu W, et al. Network pharmacology and experimental verification reveal the mechanism of Qingfei Tongluo mixture in treating pulmonary fibrosis. Electron J Biotechnol 2025;73. <span><span>https://doi.org/10.1016/j.ejbt.2024.10.002</span><svg><path></path></svg></span>.</div></div>","PeriodicalId":11529,"journal":{"name":"Electronic Journal of Biotechnology","volume":"73 ","pages":"Pages 38-47"},"PeriodicalIF":2.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143174325","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A sustainable exploitation of high-protein feather waste for production of cold-adapted keratinase by Penicillium lanosocoeruleum KSA-55 毛蓝青霉KSA-55可持续利用高蛋白羽毛废弃物生产冷适应角化酶
IF 2.3 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-12-20 DOI: 10.1016/j.ejbt.2024.10.003
Eman Alhomaidi

Background

The synthesis of keratinases by psychrophilic and psychrotolerant microorganisms has not received much attention, despite the fact that they can be an effective stand-in for substrate conversion at a low energy cost.

Results

In this study, some psychrophilic fungi isolated from three cold storage locations near Riyadh, Saudi Arabia, were tested for their cold-active keratinase potential. Penicillium lanosocoeruleum, a recently isolated fungus from Saudi Arabia, was the potent strain that produced cold-active keratinase. The Penicillium species was identified using sequencing of the internal transcribed spacer region (ITS). The generation of cold-active keratinase by P. lanosocoeruleum KSA-55 was optimized by two factors at time (TFAT). At pH 9.0 and 15°C, the keratinase activity was 28.9 ± 2.8 U/mL/min which increased to 41.7 ± 3.8 U/mL/min after 6 d of fermentation using peptone as a nitrogen source. The produced keratinase was chromatographed by MP 800 anion exchange resin and Sephadex G 100 size exclusion gel. At pH 9.0 and 10°C, the pure keratinase displayed the maximum specific activity of 210.3 ± 8.4 U/mg. Zn2+, Fe2+, ethylenediaminetetraacetic acid (EDTA), sodium dodecyl sulfate (SDS), and phenylmethanesulfonyl fluoride (PMSF), demonstrated severe inhibitory effects on the keratinase activity. Mn2+ ions activated the keratinase by 166.85 ± 15.6%. PMSF significantly reduced keratinase activity.

Conclusions

P. lanosocoeruleum strain KSA-55 is presented here as a new prospective producer of cold-active keratinase for a variety of biotechnological uses, including the management of keratinous waste in the poultry industry, cosmetics, and medical applications.
How to cite: Alhomaidi E. A sustainable exploitation of high-protein feather waste for production of cold-adapted keratinase by Penicillium lanosocoeruleum KSA-55. Electron J Biotechnol 2025;74. https://doi.org/10.1016/j.ejbt.2024.10.003.
利用嗜冷和耐冷微生物合成角化酶并没有受到太多的关注,尽管它们可以以低能量成本有效地替代底物转化。结果本研究从沙特阿拉伯利雅得附近的3个冷库中分离了一些嗜冷真菌,检测了它们的冷活性角化酶潜力。最近从沙特阿拉伯分离出的一种真菌青霉是产生冷活性角化酶的强效菌株。利用内部转录间隔区(ITS)测序鉴定青霉属。通过两因素(TFAT)优化了P. lanosocoeruleum KSA-55产生冷活性角化酶的条件。在pH 9.0和15℃条件下,角化酶活性为28.9±2.8 U/mL/min,以蛋白胨为氮源发酵6 d后,角化酶活性为41.7±3.8 U/mL/min。制备的角化酶用mp800阴离子交换树脂和Sephadex g100大小隔离凝胶进行层析。在pH 9.0和10℃条件下,纯化的角化酶比活性最高为210.3±8.4 U/mg。Zn2+、Fe2+、乙二胺四乙酸(EDTA)、十二烷基硫酸钠(SDS)和苯甲磺酰氟(PMSF)对角化酶活性有明显的抑制作用。Mn2+离子对角化酶的激活率为166.85±15.6%。PMSF显著降低角化酶活性。lanosocoeruleum菌株KSA-55是一种新的有前景的冷活性角化酶生产商,可用于各种生物技术用途,包括家禽业、化妆品和医疗应用中的角化废物管理。毛蓝青霉菌KSA-55对高蛋白羽毛废弃物的可持续利用及其生产冷适应角化酶的研究。中国生物医学工程学报(英文版);2009;34。https://doi.org/10.1016/j.ejbt.2024.10.003。
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引用次数: 0
Development of a chemically defined medium for Yarrowia yeasts using a strategy of biological mimicry 利用生物模仿策略为雅罗酵母菌开发化学定义培养基
IF 2.3 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-11-07 DOI: 10.1016/j.ejbt.2024.10.001
Oliver Birrenbach , Peter Czermak

Background

The efficiency of recombinant protein production in Yarrowia lipolytica is strongly influenced by the culture medium. Complex media have limited applications because the composition is undefined and variable, whereas chemically defined media achieve better yields and reproducibility. Defined media also increase selectivity, reduce contamination risks, and enable precise nutrient control, leading to better growth and higher productivity. We used a design of experiments approach based on the elemental composition of yeast for the arithmetic development and optimization of a defined medium for the Y. lipolytica auxotrophic strain PO1f.

Results

Statistically supported optimal concentrations of 10 g*L−1 glucose and 2.29 g*L−1 leucine enabled superior growth in the new in silico yeast (ISY) medium. Specific growth rates of 0.305 h−1 were achieved for the auxotrophic Yarrowia strain. Thiamine hydrochloride was a growth-limiting component, and higher concentrations increased the cell density of Y. lipolytica PO1f cultures by a factor of 30.

Conclusions

ISY medium was suitable not only for the cultivation of Y. lipolytica but also universally applicable for Yarrowia-like and other yeasts, achieving better growth rates and yields compared to existing chemically defined media.
How to cite: Birrenbach O, Czermak P. Development of a chemically defined medium for Yarrowia yeasts using a strategy of biological mimicry. Electron J Biotechnol 2025;73. https://doi.org/10.1016/j.ejbt.2024.10.001.
背景脂肪分解亚罗菌重组蛋白的生产效率受培养基的影响很大。复杂的培养基由于成分不确定且可变,因此应用有限,而化学定义的培养基能获得更好的产量和可重复性。定义培养基还能提高选择性、降低污染风险并实现精确的营养控制,从而实现更好的生长和更高的生产率。我们采用基于酵母元素组成的实验设计方法,对脂肪溶解酵母辅助营养菌株 PO1f 的定义培养基进行了算术开发和优化。结果在统计学上得到支持的最佳浓度为 10 g*L-1 葡萄糖和 2.29 g*L-1 亮氨酸,这使得新的硅酵母(ISY)培养基能够实现更优越的生长。辅助营养型亚罗酵母菌株的特定生长率为 0.305 h-1。结论ISY培养基不仅适用于脂肪溶解酵母菌的培养,而且普遍适用于类亚罗维氏酵母菌和其他酵母菌,与现有的化学定义培养基相比,它能获得更好的生长率和产量:Birrenbach O, Czermak P. 利用生物拟态策略为亚罗酵母开发化学定义培养基。Electron J Biotechnol 2025;73. https://doi.org/10.1016/j.ejbt.2024.10.001.
{"title":"Development of a chemically defined medium for Yarrowia yeasts using a strategy of biological mimicry","authors":"Oliver Birrenbach ,&nbsp;Peter Czermak","doi":"10.1016/j.ejbt.2024.10.001","DOIUrl":"10.1016/j.ejbt.2024.10.001","url":null,"abstract":"<div><h3>Background</h3><div>The efficiency of recombinant protein production in <em>Yarrowia lipolytica</em> is strongly influenced by the culture medium. Complex media have limited applications because the composition is undefined and variable, whereas chemically defined media achieve better yields and reproducibility. Defined media also increase selectivity, reduce contamination risks, and enable precise nutrient control, leading to better growth and higher productivity. We used a design of experiments approach based on the elemental composition of yeast for the arithmetic development and optimization of a defined medium for the <em>Y. lipolytica</em> auxotrophic strain PO1f.</div></div><div><h3>Results</h3><div>Statistically supported optimal concentrations of 10 g*L<sup>−1</sup> glucose and 2.29 g*L<sup>−1</sup> leucine enabled superior growth in the new <em>in silico</em> yeast (ISY) medium. Specific growth rates of 0.305 h<sup>−1</sup> were achieved for the auxotrophic <em>Yarrowia</em> strain. Thiamine hydrochloride was a growth-limiting component, and higher concentrations increased the cell density of <em>Y. lipolytica</em> PO1f cultures by a factor of 30.</div></div><div><h3>Conclusions</h3><div>ISY medium was suitable not only for the cultivation of <em>Y. lipolytica</em> but also universally applicable for <em>Yarrowia</em>-like and other yeasts, achieving better growth rates and yields compared to existing chemically defined media.</div><div><strong>How to cite:</strong> Birrenbach O, Czermak P. Development of a chemically defined medium for <em>Yarrowia</em> yeasts using a strategy of biological mimicry. Electron J Biotechnol 2025;73. <span><span>https://doi.org/10.1016/j.ejbt.2024.10.001</span><svg><path></path></svg></span>.</div></div>","PeriodicalId":11529,"journal":{"name":"Electronic Journal of Biotechnology","volume":"73 ","pages":"Pages 32-37"},"PeriodicalIF":2.3,"publicationDate":"2024-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142704920","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluation of high-value bioproducts production by marine endophytic fungus Arthrinium sp. FAKSA 10 under solid state fermentation using agro-industrial wastes 评估海洋内生真菌 Arthrinium sp. FAKSA 10 在固态发酵条件下利用农业工业废弃物生产高价值生物产品的情况
IF 2.3 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-10-19 DOI: 10.1016/j.ejbt.2024.09.001
Mohammad J. Alsarraf , Fuad Ameen , Abdullah Alfalih , Zirak Sajjad

Background

To address public health challenges, there is increasing interest in bioactive metabolites from unconventional sources for targeted cancer and viral treatments with minimal side effects. Endophytic fungi are promising for these therapies. This study focused on maximizing bioactive agent yields from these fungi using a low-cost medium and optimized fermentation system.

Results

Forty-three endophytic fungi isolated from Sinularia polydactyla were cultivated on wheat bran medium and evaluated for bioactive metabolites under solid-state fermentation. Strain FAKSA 10, identified as Arthrinium sp. FAKSA 10, exhibited the highest levels of pharmaceutical metabolites, including L-glutaminase, L-methioninase, L-arginase, L-asparaginase, L-tyrosinase, L-lysine α-oxidase, and ribonuclease, with a 79.12% hepatitis C virus knockdown rate. This strain produced 46 metabolites with anticancer, antioxidant, antiviral, and cytotoxic properties, including major compounds like hexadecanoic acid methyl ester; hexadecanoic acid ethyl ester; 9, 12-octadecadienoic acid (Z, Z), methyl ester; 9-octadecenoic acid (Z)-, methyl ester, and 11, 14-eicosadienoic acid, methyl ester. A cost-effective strategy using 11 agro-industrial residues was applied, followed by optimization of the solid-state fermentation system. This optimization increased enzyme yields and enhanced antiviral and antioxidant activities. The optimal conditions for solid-state fermentation were a 10 d incubation, 1 mm particle size, 60% initial moisture, 28 °C temperature, and 2 × 107 CFU/mL inoculum size.

Conclusions

This study exploited Arthrinium sp. FAKSA 10 metabolites as natural pharmaceuticals against cancer and viral diseases, highlighting their significant antioxidant properties. Among various residues, oil cakes emerged as an effective and cost-efficient medium, capable of significantly enhancing the production of valuable bioactive metabolites.
How to cite: Alsarraf MJ, Ameen F, Alfalih A, et al. Evaluation of high-value bioproducts production by marine endophytic fungus Arthrinium sp. FAKSA 10 under solid state fermentation using agro-industrial wastes. Electron J Biotechnol 2024;73. https://doi.org/10.1016/j.ejbt.2024.09.001.
背景为了应对公共卫生挑战,人们越来越关注从非常规来源获取生物活性代谢物,用于副作用最小的癌症和病毒靶向治疗。内生真菌在这些疗法中大有可为。本研究的重点是利用低成本培养基和优化的发酵系统,最大限度地提高这些真菌的生物活性物质产量。结果在麦麸培养基上培养了从多触角杉中分离出的 43 种内生真菌,并在固态发酵条件下对其生物活性代谢物进行了评估。被鉴定为 Arthrinium sp. FAKSA 10 的菌株表现出最高水平的药物代谢物,包括 L-谷氨酰胺酶、L-蛋氨酸酶、L-精氨酸酶、L-天冬酰胺酶、L-酪氨酸酶、L-赖氨酸α-氧化酶和核糖核酸酶,其丙型肝炎病毒抑制率为 79.12%。该菌株产生了 46 种具有抗癌、抗氧化、抗病毒和细胞毒性特性的代谢物,包括十六烷酸甲酯、十六烷酸乙酯、9, 12-十八碳二烯酸(Z, Z)甲酯、9-十八碳二烯酸(Z)-甲酯和 11, 14-二十碳二烯酸甲酯等主要化合物。使用 11 种农用工业残留物是一种具有成本效益的策略,随后对固态发酵系统进行了优化。这一优化提高了酶产量,并增强了抗病毒和抗氧化活性。固态发酵的最佳条件是 10 d 培养、1 mm 粒径、60% 初始水分、28 °C 温度和 2 × 107 CFU/mL 接种物大小。在各种残留物中,油饼是一种有效且具有成本效益的培养基,能够显著提高有价值的生物活性代谢物的产量:Evaluation of high value bioproducts production by marine endophytic fungus Arthrinium sp. FAKSA 10 under solid state fermentation using agro-industrial wastes.Electron J Biotechnol 2024;73. https://doi.org/10.1016/j.ejbt.2024.09.001.
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引用次数: 0
Antibiotic evaluation of the nanocomposites IONs-MWCNTs-Pc and IONs-GO-Pc encapsulated in the biocompatible hydrogel poly(VCL-co-PEGDA) based on photodynamic effect 基于光动力效应的包裹在生物相容性水凝胶聚(VCL-co-PEGDA)中的纳米复合材料 IONs-MWCNTs-Pc 和 IONs-GO-Pc 的抗生素评价
IF 2.3 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-10-18 DOI: 10.1016/j.ejbt.2024.08.002
Coralia Cuadrado , Alex Mantilla , Luis Hidalgo , Diego Punina

Background

The rise of drug-resistant bacteria, including Staphylococcus aureus and Escherichia coli, presents a significant healthcare challenge. This study focuses on the development of two novel nanocomposites IONs-MWCNTs-Pc and IONs-GO-Pc encapsulated within a biocompatible poly(VCL-co-PEGDA) hydrogel. These composites are designed for use in photodynamic therapy and evaluated for their antimicrobial efficacy against resistant pathogens.

Results

The synthesized nanocomposites, when irradiated with red light at 630 nm, showed significant antimicrobial activity, resulting in a marked reduction in the viability of S. aureus ATCC 27543, S. aureus ATCC 33591, and E. coli ATCC 971182. Photodynamic studies demonstrated that the IONs-GO-Pc nanocomposite was more efficient in generating singlet oxygen compared to IONs-MWCNTs-Pc, which correlated with its superior antimicrobial performance. Structural and chemical characterization confirmed the successful incorporation of nanomaterials and photosensitizers, enhancing the photodynamic effect.

Conclusions

The study demonstrates that both IONs-MWCNTs-Pc and IONs-GO-Pc nanocomposites show promise as alternative treatments for infections caused by antibiotic-resistant bacteria, with the GO-based composite showing higher photodynamic therapy efficacy. These findings suggest that such nanocomposites could play a pivotal role in advancing antimicrobial strategies against resistant pathogens.
How to cite: Cuadrado C, Mantilla A, Hidalgo L, et al. Antibiotic evaluation of the nanocomposites IONs-MWCNTs-Pc and IONs-GO-Pc encapsulated in the biocompatible hydrogel poly(VCL-co-PEGDA) based on photodynamic effect. Electron J Biotechnol 2025;73. https://doi.org/10.1016/j.ejbt.2024.08.002.
背景抗药性细菌(包括金黄色葡萄球菌和大肠杆菌)的增加给医疗保健带来了巨大挑战。本研究的重点是开发两种新型纳米复合材料:包裹在生物相容性聚(VCL-co-PEGDA)水凝胶中的 IONs-MWCNTs-Pc 和 IONs-GO-PC。结果合成的纳米复合材料在 630 纳米红光照射下显示出显著的抗菌活性,明显降低了金黄色葡萄球菌 ATCC 27543、金黄色葡萄球菌 ATCC 33591 和大肠杆菌 ATCC 971182 的存活率。光动力研究表明,与 IONs-MWCNTs-Pc 相比,IONs-GO-PC 纳米复合材料生成单线态氧的效率更高,这与其卓越的抗菌性能有关。该研究表明,IONs-MWCNTs-PC 和 IONs-GO-Pc 纳米复合材料有望成为抗生素耐药细菌引起的感染的替代疗法,其中基于 GO 的复合材料显示出更高的光动力疗法疗效。这些研究结果表明,此类纳米复合材料可在推进抗菌策略以对抗耐药病原体方面发挥关键作用:Cuadrado C, Mantilla A, Hidalgo L, et al.基于光动力效应对包裹在生物相容性水凝胶聚(VCL-co-PEGDA)中的纳米复合材料 IONs-MWCNTs-Pc 和 IONs-GO-Pc 的抗生素评估。https://doi.org/10.1016/j.ejbt.2024.08.002.
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引用次数: 0
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Electronic Journal of Biotechnology
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