Polygonum hydropiper (PH) is a rich source of active compounds and serves as a pivotal ingredient in Chinese rice wine (Huangjiu) production. This study investigates the impact of PH and Polygonum hydropiper extract (PHE) on ethyl carbamate (EC) production during Huangjiu fermentation. Our findings reveal that PH enhances the relative abundance of Bacillus subtilis in Huangjiu fermentation, thereby facilitating its interaction with Saccharomyces cerevisiae. Furthermore, PH modulates the urea metabolism of S. cerevisiae. In the PH-B. subtilis-S. cerevisiae fermentation system, the expression of DUR1,2 and DUR3 genes in S. cerevisiae is upregulated. This augmentation leads to increased urea uptake and metabolism by S. cerevisiae in the fermentation broth, subsequently reducing the urea concentration in the fermentation medium (The EC content in the CK group was approximately 355.55 % and 356.05 % higher than those in the PH and PHE groups, respectively). Consequently, PH demonstrates promise in reducing the EC concentration of Huangjiu, offering a novel approach to enhance the safety of Huangjiu consumption.
{"title":"Mechanism of Polygonum hydropiper reducing ethyl carbamate in Chinese rice wine (Huangjiu) brewing","authors":"Qi Peng , Huajun Zheng , Jingrun Xue , Yuezheng Xu , Qifan Hou , Kaiming Yang , Huangjia Xia , Guangfa Xie","doi":"10.1016/j.fm.2024.104628","DOIUrl":"10.1016/j.fm.2024.104628","url":null,"abstract":"<div><p><em>Polygonum hydropiper</em> (PH) is a rich source of active compounds and serves as a pivotal ingredient in Chinese rice wine (Huangjiu) production. This study investigates the impact of PH and Polygonum hydropiper extract (PHE) on ethyl carbamate (EC) production during Huangjiu fermentation. Our findings reveal that PH enhances the relative abundance of <em>Bacillus subtilis</em> in Huangjiu fermentation, thereby facilitating its interaction with <em>Saccharomyces cerevisiae</em>. Furthermore, PH modulates the urea metabolism of <em>S. cerevisiae</em>. In the PH-<em>B. subtilis-S. cerevisiae</em> fermentation system, the expression of <em>DUR1,2</em> and <em>DUR3</em> genes in <em>S. cerevisiae</em> is upregulated. This augmentation leads to increased urea uptake and metabolism by <em>S. cerevisiae</em> in the fermentation broth, subsequently reducing the urea concentration in the fermentation medium (The EC content in the CK group was approximately 355.55 % and 356.05 % higher than those in the PH and PHE groups, respectively). Consequently, PH demonstrates promise in reducing the EC concentration of Huangjiu, offering a novel approach to enhance the safety of Huangjiu consumption.</p></div>","PeriodicalId":12399,"journal":{"name":"Food microbiology","volume":"125 ","pages":"Article 104628"},"PeriodicalIF":4.5,"publicationDate":"2024-09-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142129660","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-30DOI: 10.1016/j.fm.2024.104627
Rebecca Yinglan Zhou , Jian-Yong Chua , Shao-Quan Liu
This study investigated various strategies: mono-, simultaneous and sequential fermentation of halophilic Candida versatilis and Tetragenococcus halophilus to valorize salted whey, a side stream of salted tofu (pressed beancurd) production, with an ultimate goal of creating a soy sauce-like condiment. Growth, glucose, organic acids were monitored throughout fermentation, while free amino acids and volatile compounds were analyzed on the final days. In monoculture fermentation, both C. versatilis and T. halophilus thrived in salted soy whey. However, in co-culture fermentation, an antagonistic relationship was observed, wherein C. versatilis growth was slightly suppressed and T. halophilus was significantly inhibited. In C. versatilis-involved fermentations, no significant (p > 0.05) differences in key volatile and non-volatile chemical components were found among various fermentation modes. Key soy sauce-like volatile compounds, such as 4-ethylguaiacol and 4-ethylphenol, were detected in all C. versatilis-fermented salted soy whey, while T. halophilus primarily functioned as a lactic and acetic acids producer. This study highlights the potential of mixed culture fermentation involving soy sauce yeast and lactic acid bacteria for eventually developing a soy sauce-like condiment from salted soy whey, with C. versatilis playing a crucial role in flavour development. The findings suggest that fermenting of a single culture of C. versatilis in lactic acid-adjusted salted soy whey could be a viable and efficient choice for future production of soy sauce-like condiment.
本研究调查了各种策略:嗜卤念珠菌和嗜卤四源球菌的单发酵、同时发酵和连续发酵,以提高盐渍乳清(盐渍豆腐(压豆腐)生产的副产品)的价值,最终目标是制作类似酱油的调味品。在整个发酵过程中对生长、葡萄糖、有机酸进行监测,最后几天对游离氨基酸和挥发性化合物进行分析。在单培养发酵过程中,C. versatilis 和 T. halophilus 都在盐渍大豆乳清中茁壮成长。然而,在共培养发酵中,观察到了一种拮抗关系,C. versatilis 的生长受到轻微抑制,而 T. halophilus 则受到明显抑制。在有 C. versatilis 参与的发酵中,各种发酵模式的主要挥发性和非挥发性化学成分没有发现显著差异(p > 0.05)。在所有经 C. versatilis 发酵的盐渍大豆乳清中都检测到了关键的酱油类挥发性化合物,如 4-乙基愈创木酚和 4-乙基苯酚,而 T. halophilus 则主要作为乳酸和醋酸的生产者。这项研究强调了酱油酵母和乳酸菌混合培养发酵的潜力,最终可利用盐渍大豆乳清开发出类似酱油的调味品,而 C. versatilis 在风味开发中起着关键作用。研究结果表明,在经乳酸调整的盐渍大豆乳清中发酵单一培养的C. versatilis是未来生产酱油类调味品的一种可行而有效的选择。
{"title":"Growth and metabolism of halophilic Candida versatilis and Tetragenococcus halophilus in simultaneous and sequential fermentation of salted soy whey","authors":"Rebecca Yinglan Zhou , Jian-Yong Chua , Shao-Quan Liu","doi":"10.1016/j.fm.2024.104627","DOIUrl":"10.1016/j.fm.2024.104627","url":null,"abstract":"<div><p>This study investigated various strategies: mono-, simultaneous and sequential fermentation of halophilic <em>Candida versatilis</em> and <em>Tetragenococcus halophilus</em> to valorize salted whey, a side stream of salted tofu (pressed beancurd) production, with an ultimate goal of creating a soy sauce-like condiment. Growth, glucose, organic acids were monitored throughout fermentation, while free amino acids and volatile compounds were analyzed on the final days. In monoculture fermentation, both <em>C. versatilis</em> and <em>T. halophilus</em> thrived in salted soy whey. However, in co-culture fermentation, an antagonistic relationship was observed, wherein <em>C. versatilis</em> growth was slightly suppressed and <em>T. halophilus</em> was significantly inhibited. In <em>C. versatilis</em>-involved fermentations, no significant (<em>p</em> > 0.05) differences in key volatile and non-volatile chemical components were found among various fermentation modes. Key soy sauce-like volatile compounds, such as 4-ethylguaiacol and 4-ethylphenol, were detected in all <em>C. versatilis</em>-fermented salted soy whey, while <em>T. halophilus</em> primarily functioned as a lactic and acetic acids producer. This study highlights the potential of mixed culture fermentation involving soy sauce yeast and lactic acid bacteria for eventually developing a soy sauce-like condiment from salted soy whey, with <em>C. versatilis</em> playing a crucial role in flavour development. The findings suggest that fermenting of a single culture of <em>C. versatilis</em> in lactic acid-adjusted salted soy whey could be a viable and efficient choice for future production of soy sauce-like condiment.</p></div>","PeriodicalId":12399,"journal":{"name":"Food microbiology","volume":"125 ","pages":"Article 104627"},"PeriodicalIF":4.5,"publicationDate":"2024-08-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142129661","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-27DOI: 10.1016/j.fm.2024.104624
James D. Duncan , Hugo Devillers , Carole Camarasa , Mathabatha E. Setati , Benoit Divol
Environmental conditions significantly impact the metabolism of Saccharomyces cerevisiae, a Crabtree-positive yeast that maintains a fermentative metabolism in high-sugar environments even in the presence of oxygen. Although the introduction of oxygen has been reported to induce alterations in yeast metabolism, knowledge of the mechanisms behind these metabolic adaptations in relation to redox cofactor metabolism and their implications in the context of wine fermentation remains limited. This study aimed to compare the intracellular redox cofactor levels, the cofactor ratios, and primary metabolite production in S. cerevisiae under aerobic and anaerobic conditions in synthetic grape juice. The molecular mechanisms underlying these metabolic differences were explored using a transcriptomic approach. Aerobic conditions resulted in an enhanced fermentation rate and biomass yield. Total NADP(H) levels were threefold higher during aerobiosis, while a decline in the total levels of NAD(H) was observed. However, there were stark differences in the ratio of NAD+/NADH between the treatments. Despite few changes in the differential expression of genes involved in redox cofactor metabolism, anaerobiosis resulted in an increased expression of genes involved in lipid biosynthesis pathways, while the presence of oxygen increased the expression of genes associated with thiamine, methionine, and sulfur metabolism. The production of fermentation by-products was linked with differences in the redox metabolism in each treatment. This study provides valuable insights that may help steer the production of metabolites of industrial interest during alcoholic fermentation (including winemaking) by using oxygen as a lever of redox metabolism.
{"title":"Oxygen alters redox cofactor dynamics and induces metabolic shifts in Saccharomyces cerevisiae during alcoholic fermentation","authors":"James D. Duncan , Hugo Devillers , Carole Camarasa , Mathabatha E. Setati , Benoit Divol","doi":"10.1016/j.fm.2024.104624","DOIUrl":"10.1016/j.fm.2024.104624","url":null,"abstract":"<div><p>Environmental conditions significantly impact the metabolism of <em>Saccharomyces cerevisiae</em>, a Crabtree-positive yeast that maintains a fermentative metabolism in high-sugar environments even in the presence of oxygen. Although the introduction of oxygen has been reported to induce alterations in yeast metabolism, knowledge of the mechanisms behind these metabolic adaptations in relation to redox cofactor metabolism and their implications in the context of wine fermentation remains limited. This study aimed to compare the intracellular redox cofactor levels, the cofactor ratios, and primary metabolite production in <em>S. cerevisiae</em> under aerobic and anaerobic conditions in synthetic grape juice. The molecular mechanisms underlying these metabolic differences were explored using a transcriptomic approach. Aerobic conditions resulted in an enhanced fermentation rate and biomass yield. Total NADP(H) levels were threefold higher during aerobiosis, while a decline in the total levels of NAD(H) was observed. However, there were stark differences in the ratio of NAD<sup>+</sup>/NADH between the treatments. Despite few changes in the differential expression of genes involved in redox cofactor metabolism, anaerobiosis resulted in an increased expression of genes involved in lipid biosynthesis pathways, while the presence of oxygen increased the expression of genes associated with thiamine, methionine, and sulfur metabolism. The production of fermentation by-products was linked with differences in the redox metabolism in each treatment. This study provides valuable insights that may help steer the production of metabolites of industrial interest during alcoholic fermentation (including winemaking) by using oxygen as a lever of redox metabolism.</p></div>","PeriodicalId":12399,"journal":{"name":"Food microbiology","volume":"124 ","pages":"Article 104624"},"PeriodicalIF":4.5,"publicationDate":"2024-08-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S074000202400162X/pdfft?md5=b9a343c1250d3dd8a4ed1a60856da69a&pid=1-s2.0-S074000202400162X-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142088522","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-27DOI: 10.1016/j.fm.2024.104626
Jian Guo , Mingming Qiu , Ling Li , Zhenbo Gao , Guoxin Zhou , Xingquan Liu
Volatile organic compounds (VOCs), a byproduct of mold metabolism, have garnered increasing interest because the VOCs can be used to detect food early contamination. So far, the use of VOCs as indicators of rice mildew, specifically caused by Aspergillus tubingensis and Penicillium oxalicum, and the mechanisms of their generation are not well investigated. This study examines the VOCs produced by these molds during paddy storage, utilizing headspace solid-phase micro-extraction gas chromatography-mass spectrometry (HS-SPME-GC–MS). We further elucidate the mechanisms underlying the formation of these VOCs through a comparative transcriptomic analysis. The VOCs characteristic to A. tubingensis and P. oxalicum, identified with a VIP value > 1 in the partial least squares discriminant analysis (PLS-DA) model, are primarily alkenes. Our transcriptome analysis uncovers key metabolic pathways in both molds, including energy metabolism and pathways related to volatile substance formation, and identifies differentially expressed genes associated with alkane and alcohol formation.
挥发性有机化合物(VOCs)是霉菌新陈代谢的副产品,由于 VOCs 可用于检测食品的早期污染,因此越来越受到人们的关注。迄今为止,人们还没有很好地研究如何利用 VOCs 作为水稻霜霉病(特别是由管曲霉和草青霉引起的)的指标,以及 VOCs 的产生机制。本研究利用顶空固相微萃取气相色谱-质谱联用仪(HS-SPME-GC-MS)对这些霉菌在稻谷储藏过程中产生的挥发性有机化合物进行了研究。我们通过比较转录组分析进一步阐明了这些挥发性有机化合物的形成机制。在偏最小二乘判别分析(PLS-DA)模型中,VIP 值为 1 的 A. tubingensis 和 P. oxalicum 所特有的挥发性有机化合物主要是烯烃。我们的转录组分析发现了这两种霉菌的关键代谢途径,包括能量代谢和与挥发性物质形成相关的途径,并确定了与烷烃和酒精形成相关的差异表达基因。
{"title":"Comparative transcriptomic analysis and volatile compound characterization of Aspergillus tubingensis and Penicillium oxalicum during their infestation of Japonica rice","authors":"Jian Guo , Mingming Qiu , Ling Li , Zhenbo Gao , Guoxin Zhou , Xingquan Liu","doi":"10.1016/j.fm.2024.104626","DOIUrl":"10.1016/j.fm.2024.104626","url":null,"abstract":"<div><p>Volatile organic compounds (VOCs), a byproduct of mold metabolism, have garnered increasing interest because the VOCs can be used to detect food early contamination. So far, the use of VOCs as indicators of rice mildew, specifically caused by <em>Aspergillus tubingensis</em> and <em>Penicillium oxalicum</em>, and the mechanisms of their generation are not well investigated. This study examines the VOCs produced by these molds during paddy storage, utilizing headspace solid-phase micro-extraction gas chromatography-mass spectrometry (HS-SPME-GC–MS). We further elucidate the mechanisms underlying the formation of these VOCs through a comparative transcriptomic analysis. The VOCs characteristic to <em>A. tubingensis</em> and <em>P. oxalicum</em>, identified with a VIP value > 1 in the partial least squares discriminant analysis (PLS-DA) model, are primarily alkenes. Our transcriptome analysis uncovers key metabolic pathways in both molds, including energy metabolism and pathways related to volatile substance formation, and identifies differentially expressed genes associated with alkane and alcohol formation.</p></div>","PeriodicalId":12399,"journal":{"name":"Food microbiology","volume":"125 ","pages":"Article 104626"},"PeriodicalIF":4.5,"publicationDate":"2024-08-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142136105","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-24DOI: 10.1016/j.fm.2024.104623
Cassamo U. Mussagy , Angie V. Caicedo-Paz , Fabiane O. Farias , Leonardo M. de Souza Mesquita , Daniele Giuffrida , Laurent Dufossé
The demand for natural products has significantly increased, driving interest in carotenoids as bioactive compounds for both human and animal consumption. Carotenoids, natural pigments with several biological properties, like antioxidant and antimicrobial, are increasingly preferred over synthetic colorants by the consumers (chemophobia). The global carotenoid market is projected to reach US$ 2.45 billion by 2034, driven by consumer preferences for natural ingredients and regulatory restrictions on synthetic products. Among carotenoids, bacterioruberin (BR), a C50 carotenoid naturally found in microbial hyperhalophilic archaea and in moderate halophilic archaea, stands out for its exceptional antioxidant capabilities, surpassing even well-known carotenoids like astaxanthin. BR's and its derivatives unique structure, with 13 conjugated double bonds and four -OH groups, contributes to its potent antioxidant activity and potential applications in food, feed, supplements, pharmaceuticals, and cosmeceuticals. This review explores BR's chemical and biological properties, upstream and downstream technologies, analytical techniques, market applications, and prospects in the colorants industry. While BR is not intended to replace existing carotenoids, its inclusion enriches the range of natural products available to meet the rising demand for natural alternatives. Furthermore, BR's promising antioxidant capacity positions it as a key player in the future carotenoid market, offering diverse industries a natural and potent alternative for several applications.
{"title":"Microbial bacterioruberin: The new C50 carotenoid player in food industries","authors":"Cassamo U. Mussagy , Angie V. Caicedo-Paz , Fabiane O. Farias , Leonardo M. de Souza Mesquita , Daniele Giuffrida , Laurent Dufossé","doi":"10.1016/j.fm.2024.104623","DOIUrl":"10.1016/j.fm.2024.104623","url":null,"abstract":"<div><p>The demand for natural products has significantly increased, driving interest in carotenoids as bioactive compounds for both human and animal consumption. Carotenoids, natural pigments with several biological properties, like antioxidant and antimicrobial, are increasingly preferred over synthetic colorants by the consumers (<em>chemophobia</em>). The global carotenoid market is projected to reach US$ 2.45 billion by 2034, driven by consumer preferences for natural ingredients and regulatory restrictions on synthetic products. Among carotenoids, bacterioruberin (BR), a C<sub>50</sub> carotenoid naturally found in microbial hyperhalophilic archaea and in moderate halophilic archaea, stands out for its exceptional antioxidant capabilities, surpassing even well-known carotenoids like astaxanthin. BR's and its derivatives unique structure, with 13 conjugated double bonds and four -OH groups, contributes to its potent antioxidant activity and potential applications in food, feed, supplements, pharmaceuticals, and cosmeceuticals. This review explores BR's chemical and biological properties, upstream and downstream technologies, analytical techniques, market applications, and prospects in the colorants industry. While BR is not intended to replace existing carotenoids, its inclusion enriches the range of natural products available to meet the rising demand for natural alternatives. Furthermore, BR's promising antioxidant capacity positions it as a key player in the future carotenoid market, offering diverse industries a natural and potent alternative for several applications.</p></div>","PeriodicalId":12399,"journal":{"name":"Food microbiology","volume":"124 ","pages":"Article 104623"},"PeriodicalIF":4.5,"publicationDate":"2024-08-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142095259","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Escherichia coli O157:H7 is a pathogenic serotype of Escherichia coli. Consumption of food contaminated with E. coli O157:H7 could cause a range of diseases. Therefore, it is of great importance to establish rapid and accurate detection methods for E. coli O157:H7 in food. In this study, based on LAMP and combined with the CRISPR/cas12a system, a sensitive and specific rapid detection method for E. coli O157:H7 was established, and One-Pot detection method was also constructed. The sensitivity of this method could stably reach 9.2 × 10° CFU/mL in pure culture, and the whole reaction can be completed within 1 h. In milk, E. coli O157:H7 with an initial contamination of 7.4 × 10° CFU/mL only needed to be cultured for 3 h to be detected. The test results can be judged by the fluorescence curve or by visual observation under a UV lamp, eliminating instrument limitations and One-Pot detection can effectively prevent the problem of false positives. In a word, the LAMP-CRISPR/cas12a system is a highly sensitive and convenient method for detecting E. coli O157:H7.
{"title":"Establishment of LAMP-CRISPR/Cas12a for rapid detection of Escherichia coli O157:H7 and one-pot detection","authors":"Zuwei Wang, Huan Chen, Antuo Hu, Xinping Cui, Changzheng Shi, Zhaoxin Lu, Fanqiang Meng, Fengxia Lv, Haizhen Zhao, Xiaomei Bie","doi":"10.1016/j.fm.2024.104622","DOIUrl":"10.1016/j.fm.2024.104622","url":null,"abstract":"<div><p><em>Escherichia coli</em> O157:H7 is a pathogenic serotype of <em>Escherichia coli</em>. Consumption of food contaminated with <em>E. coli</em> O157:H7 could cause a range of diseases. Therefore, it is of great importance to establish rapid and accurate detection methods for <em>E. coli</em> O157:H7 in food. In this study, based on LAMP and combined with the CRISPR/cas12a system, a sensitive and specific rapid detection method for <em>E. coli</em> O157:H7 was established, and One-Pot detection method was also constructed. The sensitivity of this method could stably reach 9.2 × 10° CFU/mL in pure culture, and the whole reaction can be completed within 1 h. In milk, <em>E. coli</em> O157:H7 with an initial contamination of 7.4 × 10° CFU/mL only needed to be cultured for 3 h to be detected. The test results can be judged by the fluorescence curve or by visual observation under a UV lamp, eliminating instrument limitations and One-Pot detection can effectively prevent the problem of false positives. In a word, the LAMP-CRISPR/cas12a system is a highly sensitive and convenient method for detecting <em>E. coli</em> O157:H7.</p></div>","PeriodicalId":12399,"journal":{"name":"Food microbiology","volume":"124 ","pages":"Article 104622"},"PeriodicalIF":4.5,"publicationDate":"2024-08-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142075679","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-20DOI: 10.1016/j.fm.2024.104617
Rafaela C. Baptista , Ilario Ferrocino , Matheus Pavani , Tatiane M. Guerreiro , Antonio A. Câmara Jr. , Émilie Lang , Juliana L.P. dos Santos , Rodrigo R. Catharino , Elenilson G. Alves Filho , Sueli Rodrigues , Edy S. de Brito , Magdevis Y.R. Caturla , Anderson S. Sant’Ana , Luca Cocolin
This study aimed to assess the bacterial microbiota involved in the spoilage of pacu (Piaractus mesopotamics), patinga (female Piaractus mesopotamics x male Piaractus brachypomus), and tambacu (female Colossoma macropomum × male Piaractus mesopotamics) during ice and frozen storage. Changes in the microbiota of three fish species (N = 22) during storage were studied through 16S rRNA amplicon-based sequencing and correlated with volatile organic compounds (VOCs) and metabolites assessed by nuclear magnetic resonance (NMR). Storage conditions (time and temperature) affected the microbiota diversity in all fish samples. Fish microbiota comprised mainly of Pseudomonas sp., Brochothrix sp., Acinetobacter sp., Bacillus sp., Lactiplantibacillus sp., Kocuria sp., and Enterococcus sp. The relative abundance of Kocuria, P. fragi, L. plantarum, Enterococcus, and Acinetobacter was positively correlated with the metabolic pathways of ether lipid metabolism while B. thermosphacta and P. fragi were correlated with metabolic pathways involved in amino acid metabolism. P. fragi was the most prevalent spoilage bacteria in both storage conditions (ice and frozen), followed by B. thermosphacta. Moreover, the relative abundance of identified Bacillus strains in fish samples stored in ice was positively correlated with the production of VOCs (1-hexanol, nonanal, octenol, and 2-ethyl-1-hexanol) associated with off-flavors. 1H NMR analysis confirmed that amino acids, acetic acid, and ATP degradation products increase over (ice) storage, and therefore considered chemical spoilage index of fish fillets.
本研究旨在评估在冰冻和冷冻贮藏过程中,参与帕库(Piaractus mesopotamics)、帕丁加(雌性 Piaractus mesopotamics x 雄性 Piaractus brachypomus)和坦巴库(雌性 Colossoma macropomum x 雄性 Piaractus mesopotamics)腐败的细菌微生物群。通过 16S rRNA 扩增子测序法研究了三种鱼类(22 条)在贮藏期间微生物群的变化,并将其与核磁共振(NMR)评估的挥发性有机化合物(VOC)和代谢物联系起来。储存条件(时间和温度)影响了所有鱼类样本中微生物群的多样性。鱼类微生物群主要由假单胞菌属、布氏菌属、醋酐菌属、芽孢杆菌属、乳杆菌属、库氏菌属和肠球菌属组成、Kocuria、P. fragi、L. plantarum、Enterococcus 和 Acinetobacter 的相对丰度与醚脂代谢途径呈正相关,而 B. thermosphacta 和 P. fragi 与氨基酸代谢途径相关。在两种储存条件下(冰贮和冷冻),P. fragi 是最常见的腐败细菌,其次是 B. thermosphacta。此外,在冰中储存的鱼类样本中,已确定的芽孢杆菌菌株的相对丰度与与异味相关的挥发性有机化合物(1-己醇、壬醛、辛烯醇和 2-乙基-1-己醇)的产生呈正相关。1H NMR 分析证实,氨基酸、乙酸和 ATP 降解产物在(冰)储存过程中会增加,因此被认为是鱼片的化学腐败指数。
{"title":"Microbiota diversity of three Brazilian native fishes during ice and frozen storage","authors":"Rafaela C. Baptista , Ilario Ferrocino , Matheus Pavani , Tatiane M. Guerreiro , Antonio A. Câmara Jr. , Émilie Lang , Juliana L.P. dos Santos , Rodrigo R. Catharino , Elenilson G. Alves Filho , Sueli Rodrigues , Edy S. de Brito , Magdevis Y.R. Caturla , Anderson S. Sant’Ana , Luca Cocolin","doi":"10.1016/j.fm.2024.104617","DOIUrl":"10.1016/j.fm.2024.104617","url":null,"abstract":"<div><p>This study aimed to assess the bacterial microbiota involved in the spoilage of pacu (<em>Piaractus mesopotamics</em>), patinga (female <em>Piaractus mesopotamics</em> x male <em>Piaractus brachypomus</em>), and tambacu (female <em>Colossoma macropomum</em> × male <em>Piaractus mesopotamics</em>) during ice and frozen storage. Changes in the microbiota of three fish species (N = 22) during storage were studied through 16S rRNA amplicon-based sequencing and correlated with volatile organic compounds (VOCs) and metabolites assessed by nuclear magnetic resonance (NMR). Storage conditions (time and temperature) affected the microbiota diversity in all fish samples. Fish microbiota comprised mainly of <em>Pseudomonas</em> sp.<em>, Brochothrix</em> sp.<em>, Acinetobacter</em> sp.<em>, Bacillus</em> sp.<em>, Lactiplantibacillus</em> sp.<em>, Kocuria</em> sp., and <em>Enterococcus</em> sp. The relative abundance of <em>Kocuria</em>, <em>P. fragi</em>, <em>L. plantarum, Enterococcus</em>, and <em>Acinetobacter</em> was positively correlated with the metabolic pathways of ether lipid metabolism while <em>B. thermosphacta</em> and <em>P. fragi</em> were correlated with metabolic pathways involved in amino acid metabolism. <em>P. fragi</em> was the most prevalent spoilage bacteria in both storage conditions (ice and frozen), followed by <em>B. thermosphacta</em>. Moreover, the relative abundance of identified <em>Bacillus strains</em> in fish samples stored in ice was positively correlated with the production of VOCs (1-hexanol, nonanal, octenol, and 2-ethyl-1-hexanol) associated with off-flavors. <sup>1</sup>H NMR analysis confirmed that amino acids, acetic acid, and ATP degradation products increase over (ice) storage, and therefore considered chemical spoilage index of fish fillets.</p></div>","PeriodicalId":12399,"journal":{"name":"Food microbiology","volume":"124 ","pages":"Article 104617"},"PeriodicalIF":4.5,"publicationDate":"2024-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142011204","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-17DOI: 10.1016/j.fm.2024.104621
Yanjie Yi , Youtian Shan , Pengyu Luan , Zhongke Sun , Xingquan Wu , Zhiwen Ning , Zhengkun Chen , Yunxiang Zhang , Shuyun Zhao , Chengwei Li
Fusarium graminearum not only causes Fusarium head blight (FHB) on wheat but also produces fungal toxins that pose a serious threat to food safety. Biological control is one of the safe and most effective alternative methods. In this study, cyclic lipopeptides (CLPs) produced from Bacillus mojavensis B1302 were extracted and identified by LC-MS/MS. After preparing mesoporous silica nanoparticles-NH2 (MSNsN) and encapsulating CLPs, the characterization analysis showed that the interaction between CLPs and MSNsN enhanced the crystal structure of CLPs-MSNsN. The antimicrobial activity and antioxidant capacity of CLPs-MSNsN stored at 20 °C and 45 °C were decreased more slowly than those of free CLPs with increasing storage time, indicating the enhancement of the antimicrobial and antioxidant stability of CLPs. Moreover, the field control efficacy of long-term stored CLPs-MSNsN only decreased from 78.66% to 63.2%, but the efficacy of free CLPs decreased significantly from 84.34% to 26.01%. The deoxynivalenol (DON) content of wheat grains in the CLPs-MSNsN treatment group was lower than that in the free CLPs treatment group, which showed that long-term stored CLPs-MSNsN reduced the DON content in wheat grains. Further analysis of the action mechanism of CLPs-MSNsN on F. graminearum showed that CLPs-MSNsN could disrupt mycelial morphology, cause cell apoptosis, lead to the leakage of proteins and nucleic acids, and destroy the cell permeability of mycelia. This work puts a novel insight into the antimicrobial and antioxidant stability enhancement of CLPs-MSNsN through encapsulation and provides a potential fungicide to control F. graminearum, reduce toxins and ensure food safety.
{"title":"Nanoencapsulation enhances the antimicrobial and antioxidant stability of cyclic lipopeptides for controlling Fusarium graminearum","authors":"Yanjie Yi , Youtian Shan , Pengyu Luan , Zhongke Sun , Xingquan Wu , Zhiwen Ning , Zhengkun Chen , Yunxiang Zhang , Shuyun Zhao , Chengwei Li","doi":"10.1016/j.fm.2024.104621","DOIUrl":"10.1016/j.fm.2024.104621","url":null,"abstract":"<div><p><em>Fusarium graminearum</em> not only causes <em>Fusarium</em> head blight (FHB) on wheat but also produces fungal toxins that pose a serious threat to food safety. Biological control is one of the safe and most effective alternative methods. In this study, cyclic lipopeptides (CLPs) produced from <em>Bacillus mojavensis</em> B1302 were extracted and identified by LC-MS/MS. After preparing mesoporous silica nanoparticles-NH<sub>2</sub> (MSNsN) and encapsulating CLPs, the characterization analysis showed that the interaction between CLPs and MSNsN enhanced the crystal structure of CLPs-MSNsN. The antimicrobial activity and antioxidant capacity of CLPs-MSNsN stored at 20 °C and 45 °C were decreased more slowly than those of free CLPs with increasing storage time, indicating the enhancement of the antimicrobial and antioxidant stability of CLPs. Moreover, the field control efficacy of long-term stored CLPs-MSNsN only decreased from 78.66% to 63.2%, but the efficacy of free CLPs decreased significantly from 84.34% to 26.01%. The deoxynivalenol (DON) content of wheat grains in the CLPs-MSNsN treatment group was lower than that in the free CLPs treatment group, which showed that long-term stored CLPs-MSNsN reduced the DON content in wheat grains. Further analysis of the action mechanism of CLPs-MSNsN on <em>F. graminearum</em> showed that CLPs-MSNsN could disrupt mycelial morphology, cause cell apoptosis, lead to the leakage of proteins and nucleic acids, and destroy the cell permeability of mycelia. This work puts a novel insight into the antimicrobial and antioxidant stability enhancement of CLPs-MSNsN through encapsulation and provides a potential fungicide to control <em>F</em>. <em>graminearum</em>, reduce toxins and ensure food safety.</p></div>","PeriodicalId":12399,"journal":{"name":"Food microbiology","volume":"124 ","pages":"Article 104621"},"PeriodicalIF":4.5,"publicationDate":"2024-08-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142020901","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-14DOI: 10.1016/j.fm.2024.104620
Xin Jia , Dan Wang , Ai-Lian Meng , Yong-Jie Lin , Ming Huang , Peng Gao , Pan Xu , Hao Chen
The spoilage of irradiated ready-to-eat chicken feet (RTECF) seriously affects the food's quality, resulting in package swelling and off-flavors, both of which are highly undesirable to stakeholders and consumers. To investigate the spoilage characteristics of irradiated RTECF and the microorganisms responsible for the spoilage and swelling, the changes in physicochemical properties, microbial community, and volatile organic compounds (VOCs) between normal and spoiled RTECF were evaluated. Compared with normal samples, the spoiled RTECF showed a higher pH value and total volatile basic nitrogen (TVB-N) value, lower color value, and texture features (P < 0.05). Acinetobacter, Pseudomonas, Lactobacillus, and Candida were the dominant genera responsible for RTECF spoilage as confirmed through both culture-dependent methods and high-throughput sequencing (HTS). The results of the verification for gas-producing strains showed that Lactobacillus brevis could cause RTECF packaging to swell. A total of 20 key VOCs were identified using headspace solid-phase microextraction combined with gas chromatography-mass spectrometry (HS-SPME-GC-MS). The results of Pearson correlation analysis (|r|>0.8, P < 0.05) showed that 12 dominant core microbial genera had a significant effect on the flavor of RTECF before and after spoilage. This study provides a theoretical reference for solving the problem of RTECF spoilage and improving the overall quality of RTECF products.
{"title":"Microbial composition of spoiled irradiated ready-to-eat chicken feet and their spoilage characteristics","authors":"Xin Jia , Dan Wang , Ai-Lian Meng , Yong-Jie Lin , Ming Huang , Peng Gao , Pan Xu , Hao Chen","doi":"10.1016/j.fm.2024.104620","DOIUrl":"10.1016/j.fm.2024.104620","url":null,"abstract":"<div><p>The spoilage of irradiated ready-to-eat chicken feet (RTECF) seriously affects the food's quality, resulting in package swelling and off-flavors, both of which are highly undesirable to stakeholders and consumers. To investigate the spoilage characteristics of irradiated RTECF and the microorganisms responsible for the spoilage and swelling, the changes in physicochemical properties, microbial community, and volatile organic compounds (VOCs) between normal and spoiled RTECF were evaluated. Compared with normal samples, the spoiled RTECF showed a higher pH value and total volatile basic nitrogen (TVB-N) value, lower color value, and texture features (P < 0.05). <em>Acinetobacter</em>, <em>Pseudomonas</em>, <em>Lactobacillus</em>, <em>and Candida</em> were the dominant genera responsible for RTECF spoilage as confirmed through both culture-dependent methods and high-throughput sequencing (HTS). The results of the verification for gas-producing strains showed that <em>Lactobacillus brevis</em> could cause RTECF packaging to swell. A total of 20 key VOCs were identified using headspace solid-phase microextraction combined with gas chromatography-mass spectrometry (HS-SPME-GC-MS). The results of Pearson correlation analysis (|r|>0.8, P < 0.05) showed that 12 dominant core microbial genera had a significant effect on the flavor of RTECF before and after spoilage. This study provides a theoretical reference for solving the problem of RTECF spoilage and improving the overall quality of RTECF products.</p></div>","PeriodicalId":12399,"journal":{"name":"Food microbiology","volume":"124 ","pages":"Article 104620"},"PeriodicalIF":4.5,"publicationDate":"2024-08-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141993462","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tick-borne encephalitis outbreaks have been reported in Europe after consumption of raw milk products from infected animals. While molecular methods are commonly used in viral foodborne outbreak investigations due to their sensitivity, specificity and rapidity, there are very few methods to detect infectious tick-borne encephalitis virus (TBEV) in milk products for routine use/analyses. To address this gap, we developed a cell culture-based method to detect infectious TBEV in artificially contaminated raw goat milk and raw goat cheese, and evaluated the sensitivity of TBEV infectivity assays. Raw goat milk samples were spiked with TBEV to achieve inoculation levels ranging from 106 to 100 TCID50/mL, and Faisselle and Tomme cheese samples were spiked so their TBEV concentrations ranged from 9.28 × 105 to 9.28 × 101 TCID50 per 2.5g. To detect infectious TBEV, Vero cells were infected by raw goat milk. For cheese samples, after homogenisation and membrane filtration, Vero cells were infected with samples adsorbed on the filter (method A) or with samples eluted from the filter (method B). After 5 days, cytopathic effects (CPEs) were observed and TBEV replication in Vero cells was confirmed by an increase in the number of genome copies/mL that were detected in cell supernatant. Infected Vero cells exhibited CPEs for both milk and cheese samples. Infectious TBEV was detected to 103 TCID50/mL in raw milk samples and to 9.28 × 101 TCID50 from Faisselle samples using both methods A and B. For Tomme samples, method A was able to detect TBEV to 9.28 × 102 TCID50/2.5g and method B to 9.28 × 103 TCID50/2.5g. The number of positive samples detected was slightly higher with method A than with method B. To conclude, this qualitative cell culture-based method can detect infectious TBEV artificially inoculated into raw milk and cheese; it should be further evaluated during foodborne outbreak investigations to detect infectious TBEV from naturally contaminated milk and cheese.
{"title":"Development of a cell culture-based method for detecting infectious tick-borne encephalitis virus (TBEV) in milk products","authors":"Catherine Hennechart-Collette , Laure Mathews-Martin , Lisa Fourniol , Audrey Fraisse , Sandra Martin-Latil , Laure Bournez , Gaëlle Gonzalez , Sylvie Perelle","doi":"10.1016/j.fm.2024.104619","DOIUrl":"10.1016/j.fm.2024.104619","url":null,"abstract":"<div><p>Tick-borne encephalitis outbreaks have been reported in Europe after consumption of raw milk products from infected animals. While molecular methods are commonly used in viral foodborne outbreak investigations due to their sensitivity, specificity and rapidity, there are very few methods to detect infectious tick-borne encephalitis virus (TBEV) in milk products for routine use/analyses. To address this gap, we developed a cell culture-based method to detect infectious TBEV in artificially contaminated raw goat milk and raw goat cheese, and evaluated the sensitivity of TBEV infectivity assays. Raw goat milk samples were spiked with TBEV to achieve inoculation levels ranging from 10<sup>6</sup> to 10<sup>0</sup> TCID<sub>50</sub>/mL, and <em>Fais</em><em>s</em><em>elle</em> and <em>Tomme</em> cheese samples were spiked so their TBEV concentrations ranged from 9.28 × 10<sup>5</sup> to 9.28 × 10<sup>1</sup> TCID<sub>50</sub> per 2.5g. To detect infectious TBEV, Vero cells were infected by raw goat milk. For cheese samples, after homogenisation and membrane filtration, Vero cells were infected with samples adsorbed on the filter (method A) or with samples eluted from the filter (method B). After 5 days, cytopathic effects (CPEs) were observed and TBEV replication in Vero cells was confirmed by an increase in the number of genome copies/mL that were detected in cell supernatant. Infected Vero cells exhibited CPEs for both milk and cheese samples. Infectious TBEV was detected to 10<sup>3</sup> TCID<sub>50</sub>/mL in raw milk samples and to 9.28 × 10<sup>1</sup> TCID<sub>50</sub> from <em>Fais</em><em>s</em><em>elle</em> samples using both methods A and B. For <em>Tomme</em> samples, method A was able to detect TBEV to 9.28 × 10<sup>2</sup> TCID<sub>50</sub>/2.5g and method B to 9.28 × 10<sup>3</sup> TCID<sub>50</sub>/2.5g. The number of positive samples detected was slightly higher with method A than with method B. To conclude, this qualitative cell culture-based method can detect infectious TBEV artificially inoculated into raw milk and cheese; it should be further evaluated during foodborne outbreak investigations to detect infectious TBEV from naturally contaminated milk and cheese.</p></div>","PeriodicalId":12399,"journal":{"name":"Food microbiology","volume":"124 ","pages":"Article 104619"},"PeriodicalIF":4.5,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142049551","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}