首页 > 最新文献

Biotechnology Journal最新文献

英文 中文
Inline Protein Concentration by Vibratory Single Pass Tangential Flow Filtration 振动单道切向流过滤的在线蛋白质浓度。
IF 3.1 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-09-19 DOI: 10.1002/biot.70124
Km Prottoy Shariar Piash, Ziqiao Wang, Claire MacElroy, Andrew L. Zydney

Single Pass Tangential Flow Filtration (SPTFF) is increasingly used for inline concentration and final formulation in intensified/continuous processes for monoclonal antibody products. However, these modules typically operate at low feed flux, requiring significant membrane area and often complex internal staging to achieve the desired concentration factor. In this study, a vibration-assisted SPTFF system was used for inline concentration of soluble protein. The maximum sustainable flux and concentration factor were evaluated under vibratory and non-vibratory conditions using flux-stepping experiments. SPTFF performed under vibration was able to achieve single pass concentration factors of 20× at a feed flux of 17.2 L/m2/h, while the non-vibratory system showed rapid fouling at much lower concentration factors. Furthermore, the vibratory module achieved a 6-fold higher concentration factor compared to a screened channel cassette. Long-term filtration experiments demonstrated that the vibratory system could concentrate a 20 g/L protein solution to 100 g/L using a single cassette with stable operation for more than 8 h without protein aggregation. This work highlights the potential opportunity to develop vibratory SPTFF systems for intensified bioprocessing.

单道切向流过滤(SPTFF)越来越多地用于单克隆抗体产品的在线浓缩和最终配方的强化/连续工艺。然而,这些模块通常在低进料通量下运行,需要很大的膜面积,并且通常需要复杂的内部分级才能达到所需的浓度系数。本研究采用振动辅助SPTFF系统对可溶性蛋白进行在线浓缩。在振动和非振动条件下,通过通量步进实验评估了最大可持续通量和浓度因子。振动条件下的SPTFF在进料流量为17.2 L/m2/h时,单次浓缩系数可达20倍,而非振动条件下,在较低的浓缩系数下,SPTFF系统会快速结垢。此外,与筛选通道盒相比,振动模块的浓度系数提高了6倍。长期过滤实验表明,振动系统可以将20 g/L的蛋白质溶液浓缩到100 g/L,单盒运行稳定8小时以上,无蛋白质聚集。这项工作强调了开发用于强化生物处理的振动SPTFF系统的潜在机会。
{"title":"Inline Protein Concentration by Vibratory Single Pass Tangential Flow Filtration","authors":"Km Prottoy Shariar Piash,&nbsp;Ziqiao Wang,&nbsp;Claire MacElroy,&nbsp;Andrew L. Zydney","doi":"10.1002/biot.70124","DOIUrl":"10.1002/biot.70124","url":null,"abstract":"<p>Single Pass Tangential Flow Filtration (SPTFF) is increasingly used for inline concentration and final formulation in intensified/continuous processes for monoclonal antibody products. However, these modules typically operate at low feed flux, requiring significant membrane area and often complex internal staging to achieve the desired concentration factor. In this study, a vibration-assisted SPTFF system was used for inline concentration of soluble protein. The maximum sustainable flux and concentration factor were evaluated under vibratory and non-vibratory conditions using flux-stepping experiments. SPTFF performed under vibration was able to achieve single pass concentration factors of 20× at a feed flux of 17.2 L/m<sup>2</sup>/h, while the non-vibratory system showed rapid fouling at much lower concentration factors. Furthermore, the vibratory module achieved a 6-fold higher concentration factor compared to a screened channel cassette. Long-term filtration experiments demonstrated that the vibratory system could concentrate a 20 g/L protein solution to 100 g/L using a single cassette with stable operation for more than 8 h without protein aggregation. This work highlights the potential opportunity to develop vibratory SPTFF systems for intensified bioprocessing.</p>","PeriodicalId":134,"journal":{"name":"Biotechnology Journal","volume":"20 9","pages":""},"PeriodicalIF":3.1,"publicationDate":"2025-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/epdf/10.1002/biot.70124","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145084840","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cephalotaxus-Derived Homoharringtonine: Biosynthesis, Mechanism of Action, and Role in Modern Cancer Therapy 头豆杉衍生的同杉碱:生物合成、作用机制及其在现代癌症治疗中的作用。
IF 3.1 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-09-19 DOI: 10.1002/biot.70122
Abdul Razzaq, Bilal A. Rather, Laviza Tuz Zahra, Hanqing Cong, Yibo Bai, Fariha Qadir, M. Nasir Khan, Muhammad Mubashar Zafar, Xuefei Jiang, Fei Qiao

The naturally occurring Cephalotaxus species belonging to the Cephalotaxaceae family have been investigated due to the unique characteristics of their secondary phytometabolites with diverse biological activity. These metabolites have been isolated and used in different Chinese medicines for the treatment of different diseases, specifically for leukemia. However, the knowledge gap of relevant metabolites for biological activity is underscored. It has been reviewed that the most important alkaloids, such as Cephalotaxine-type alkaloids, homoerythrina-type alkaloids, and homoharringtonine (HHT), are abundant in Cephalotaxus lanceolata, C. fortunei var. alpina, C. griffithii, and C. hainanensis. Cephalotaxus alkaloids, particularly homoharringtonine (HHT), have emerged as promising anticancer agents with a unique mechanism of action and key oncogenic pathways. This review critically evaluates the understudied mechanisms of Cephalotaxus alkaloids in solid tumors, their translational barriers, and innovative strategies to harness their full anticancer potential. Additionally, we examine the challenges associated with their chemical complexity, regulatory hurdles, and toxicity profiles, alongside strategies to enhance efficacy through combination therapies and advanced drug delivery systems. The review highlights ongoing clinical trials and future directions, including synthetic biology and personalized medicine. By bridging traditional knowledge with contemporary research, this work highlights the potential of Cephalotaxus alkaloids as versatile agents in precision oncology.

自然生长的头杉科植物由于其次生植物代谢物具有多种生物活性的独特特性而受到广泛的研究。这些代谢物已被分离出来,并用于不同的中药治疗不同的疾病,特别是白血病。然而,相关代谢物的生物活性的知识差距被强调。本文综述了在杉木、金针杉、金针杉和海南金针杉中含有丰富的主要生物碱,如头霉素型生物碱、同赤藓碱型生物碱和同杉碱(HHT)。头杉属生物碱,特别是同杉酸酯碱(HHT),已成为有前景的抗癌药物,具有独特的作用机制和关键的致癌途径。本文综述了头孢生物碱在实体肿瘤中的作用机制、其翻译障碍以及利用其全部抗癌潜力的创新策略。此外,我们还研究了与它们的化学复杂性、监管障碍和毒性特征相关的挑战,以及通过联合疗法和先进的药物输送系统提高疗效的策略。该综述强调了正在进行的临床试验和未来的方向,包括合成生物学和个性化医学。通过将传统知识与当代研究相结合,这项工作突出了头杉生物碱在精确肿瘤学中作为多功能制剂的潜力。
{"title":"Cephalotaxus-Derived Homoharringtonine: Biosynthesis, Mechanism of Action, and Role in Modern Cancer Therapy","authors":"Abdul Razzaq,&nbsp;Bilal A. Rather,&nbsp;Laviza Tuz Zahra,&nbsp;Hanqing Cong,&nbsp;Yibo Bai,&nbsp;Fariha Qadir,&nbsp;M. Nasir Khan,&nbsp;Muhammad Mubashar Zafar,&nbsp;Xuefei Jiang,&nbsp;Fei Qiao","doi":"10.1002/biot.70122","DOIUrl":"10.1002/biot.70122","url":null,"abstract":"<div>\u0000 \u0000 <p>The naturally occurring <i>Cephalotaxus</i> species belonging to the <i>Cephalotaxaceae</i> family have been investigated due to the unique characteristics of their secondary phytometabolites with diverse biological activity. These metabolites have been isolated and used in different Chinese medicines for the treatment of different diseases, specifically for leukemia. However, the knowledge gap of relevant metabolites for biological activity is underscored. It has been reviewed that the most important alkaloids, such as Cephalotaxine-type alkaloids, homoerythrina-type alkaloids, and homoharringtonine (HHT), are abundant in <i>Cephalotaxus lanceolata</i>, <i>C. fortunei</i> var. alpina, <i>C. griffithii</i>, and <i>C. hainanensis</i>. <i>Cephalotaxus</i> alkaloids, particularly homoharringtonine (HHT), have emerged as promising anticancer agents with a unique mechanism of action and key oncogenic pathways. This review critically evaluates the understudied mechanisms of <i>Cephalotaxus</i> alkaloids in solid tumors, their translational barriers, and innovative strategies to harness their full anticancer potential. Additionally, we examine the challenges associated with their chemical complexity, regulatory hurdles, and toxicity profiles, alongside strategies to enhance efficacy through combination therapies and advanced drug delivery systems. The review highlights ongoing clinical trials and future directions, including synthetic biology and personalized medicine. By bridging traditional knowledge with contemporary research, this work highlights the potential of <i>Cephalotaxus</i> alkaloids as versatile agents in precision oncology.</p>\u0000 </div>","PeriodicalId":134,"journal":{"name":"Biotechnology Journal","volume":"20 9","pages":""},"PeriodicalIF":3.1,"publicationDate":"2025-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145084776","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exploring the Activities of Alginate-Carrageenan@AgNPs Hydrogels Supported by Molecular Docking Studies for Potential Antimicrobial and Antioxidant Agents 通过分子对接研究探索Alginate-Carrageenan@AgNPs水凝胶在潜在抗菌剂和抗氧化剂中的活性
IF 3.1 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-09-15 DOI: 10.1002/biot.70117
Ghada E. Dawwam, Ahmed M. Khalil, Ahmed A. El-Rashedy, Doaa M. Azmy, Samir Kamel

Alginates and kappa-carrageenan (KC) are natural anionic biopolymers widely utilized in food, pharmaceutical, and cosmetic industries for their anticoagulant, immunomodulatory, and antiviral properties. However, unmodified sodium alginate/KC (SA/KC) hydrogels often lack sufficient antimicrobial and antioxidant efficacy, limiting their functionality in advanced biomedical and packaging applications. To overcome these limitations, we designed a multifunctional hydrogel incorporating silver nanoparticles (AgNPs) into an ascorbic acid-crosslinked SA/KC matrix. Comprehensive physicochemical, morphological, antibacterial, antioxidant, and cytocompatibility assessments were conducted. The 2% AgNPs composite exhibited pronounced antimicrobial activity against Gram-positive (L. monocytogenes, S. aureus), Gram-negative (E. coli, Salmonella sp.), and fungal strain (Candida albicans). The 2% AgNPs hydrogel was cytocompatible with normal Vero cells (IC50 = 599.9 ± 3.47 µg/mL), while the 8% AgNPs variant demonstrated potent antioxidant capacity (IC50 of 21.77 µg/mL and 33.3 µg/mL via DPPH and ABTS assays, respectively). Molecular dynamics simulations confirmed strong interactions between hydrogel components and key binding site residues, ensuring composite stability. These results support the potential of AgNPs-enhanced SA/KC hydrogels for antimicrobial wound dressings, bioactive drug delivery matrices, and antioxidant-active food packaging materials.

海藻酸盐和kappa- carragean (KC)是天然阴离子生物聚合物,因其抗凝血、免疫调节和抗病毒特性而广泛应用于食品、制药和化妆品行业。然而,未经改性的海藻酸钠/KC (SA/KC)水凝胶往往缺乏足够的抗菌和抗氧化功效,限制了它们在先进生物医学和包装应用中的功能。为了克服这些限制,我们设计了一种多功能水凝胶,将银纳米颗粒(AgNPs)结合到抗坏血酸交联的SA/KC基质中。进行了全面的理化、形态学、抗菌、抗氧化和细胞相容性评估。2% AgNPs复合物对革兰氏阳性菌株(单核细胞增生乳杆菌、金黄色葡萄球菌)、革兰氏阴性菌株(大肠杆菌、沙门氏菌)和真菌菌株(白色念珠菌)具有明显的抗菌活性。2% AgNPs水凝胶与正常Vero细胞相容(IC50 = 599.9±3.47µg/mL),而8% AgNPs水凝胶表现出强大的抗氧化能力(通过DPPH和ABTS检测,IC50分别为21.77µg/mL和33.3µg/mL)。分子动力学模拟证实了水凝胶组分和关键结合位点残基之间的强相互作用,确保了复合材料的稳定性。这些结果支持了agnps增强的SA/KC水凝胶在抗菌伤口敷料、生物活性药物传递基质和抗氧化活性食品包装材料方面的潜力。
{"title":"Exploring the Activities of Alginate-Carrageenan@AgNPs Hydrogels Supported by Molecular Docking Studies for Potential Antimicrobial and Antioxidant Agents","authors":"Ghada E. Dawwam,&nbsp;Ahmed M. Khalil,&nbsp;Ahmed A. El-Rashedy,&nbsp;Doaa M. Azmy,&nbsp;Samir Kamel","doi":"10.1002/biot.70117","DOIUrl":"10.1002/biot.70117","url":null,"abstract":"<div>\u0000 \u0000 <p>Alginates and kappa-carrageenan (KC) are natural anionic biopolymers widely utilized in food, pharmaceutical, and cosmetic industries for their anticoagulant, immunomodulatory, and antiviral properties. However, unmodified sodium alginate/KC (SA/KC) hydrogels often lack sufficient antimicrobial and antioxidant efficacy, limiting their functionality in advanced biomedical and packaging applications. To overcome these limitations, we designed a multifunctional hydrogel incorporating silver nanoparticles (AgNPs) into an ascorbic acid-crosslinked SA/KC matrix. Comprehensive physicochemical, morphological, antibacterial, antioxidant, and cytocompatibility assessments were conducted. The 2% AgNPs composite exhibited pronounced antimicrobial activity against Gram-positive (<i>L. monocytogenes, S. aureus</i>), Gram-negative (<i>E. coli, Salmonella</i> sp.), and fungal strain (<i>Candida albicans</i>). The 2% AgNPs hydrogel was cytocompatible with normal Vero cells (IC<sub>50</sub> = 599.9 ± 3.47 µg/mL), while the 8% AgNPs variant demonstrated potent antioxidant capacity (IC<sub>50</sub> of 21.77 µg/mL and 33.3 µg/mL via DPPH and ABTS assays, respectively). Molecular dynamics simulations confirmed strong interactions between hydrogel components and key binding site residues, ensuring composite stability. These results support the potential of AgNPs-enhanced SA/KC hydrogels for antimicrobial wound dressings, bioactive drug delivery matrices, and antioxidant-active food packaging materials.</p>\u0000 </div>","PeriodicalId":134,"journal":{"name":"Biotechnology Journal","volume":"20 9","pages":""},"PeriodicalIF":3.1,"publicationDate":"2025-09-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145058075","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Revolutionizing Agriculture With CRISPR Technology: Applications, Challenges, and Future Perspectives 用CRISPR技术革新农业:应用、挑战和未来展望。
IF 3.1 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-09-11 DOI: 10.1002/biot.70113
Yu Wang, Adam Phelps, Ashlyn Godbehere, Branndon Evans, Chinatsu Takizawa, Grace Chinen, Harvir Singh, Zhiqing Fang, Zhi-Yan Du

CRISPR technologies are rapidly transforming agriculture by enabling precise and programmable modifications across a wide range of organisms. This review provides an overview of CRISPR applications in crops, livestock, aquaculture, and microbial systems, highlighting key advances in sustainable agriculture. In crops, CRISPR has accelerated the improvement of traits such as drought tolerance, nutrient efficiency, and pathogen resistance. In livestock and aquaculture, CRISPR has enabled disease-resistant pigs and poultry, hornless cattle, and fast-growing, stress-tolerant fish. Engineered microbes are also being leveraged to enhance nitrogen fixation and reduce input reliance. We examine the evolution of CRISPR tools, such as base and prime editing, multiplex editing, and epigenome modulation, that expand precision and control beyond traditional gene knockouts. These innovations offer significant advantages over conventional breeding, yet challenges remain, including off-target effects, delivery efficiency, and regulatory variability across countries. The review also explores emerging directions such as novel Cas variants and AI-integrated breeding platforms for high-throughput trait discovery. Together, these developments demonstrate the transformative potential of CRISPR technology to reshape agriculture, not only by enhancing productivity and resilience but also by reducing environmental impacts. With responsible implementation, CRISPR-enabled innovations are well-positioned to support global food security and sustainability targets by 2050.

CRISPR技术通过对广泛的生物体进行精确和可编程的修改,正在迅速改变农业。本文综述了CRISPR在作物、牲畜、水产养殖和微生物系统中的应用,重点介绍了可持续农业的关键进展。在作物方面,CRISPR加速了诸如耐旱性、养分效率和抗病性等性状的改进。在畜牧业和水产养殖业,CRISPR已经使抗病猪和家禽、无角牛和快速生长、耐压力的鱼成为可能。工程微生物也被用来加强固氮和减少对投入的依赖。我们研究了CRISPR工具的进化,如碱基和引物编辑、多重编辑和表观基因组调节,这些工具扩展了传统基因敲除之外的精度和控制。与传统育种相比,这些创新具有显著优势,但挑战依然存在,包括脱靶效应、交付效率和各国监管差异。综述还探讨了新的Cas变异和人工智能集成育种平台等新兴方向,以实现高通量性状发现。总之,这些发展表明,CRISPR技术不仅可以提高生产力和恢复力,还可以减少对环境的影响,从而重塑农业。通过负责任的实施,利用crispr技术的创新将有利于支持到2050年实现全球粮食安全和可持续发展目标。
{"title":"Revolutionizing Agriculture With CRISPR Technology: Applications, Challenges, and Future Perspectives","authors":"Yu Wang,&nbsp;Adam Phelps,&nbsp;Ashlyn Godbehere,&nbsp;Branndon Evans,&nbsp;Chinatsu Takizawa,&nbsp;Grace Chinen,&nbsp;Harvir Singh,&nbsp;Zhiqing Fang,&nbsp;Zhi-Yan Du","doi":"10.1002/biot.70113","DOIUrl":"10.1002/biot.70113","url":null,"abstract":"<div>\u0000 \u0000 <p>CRISPR technologies are rapidly transforming agriculture by enabling precise and programmable modifications across a wide range of organisms. This review provides an overview of CRISPR applications in crops, livestock, aquaculture, and microbial systems, highlighting key advances in sustainable agriculture. In crops, CRISPR has accelerated the improvement of traits such as drought tolerance, nutrient efficiency, and pathogen resistance. In livestock and aquaculture, CRISPR has enabled disease-resistant pigs and poultry, hornless cattle, and fast-growing, stress-tolerant fish. Engineered microbes are also being leveraged to enhance nitrogen fixation and reduce input reliance. We examine the evolution of CRISPR tools, such as base and prime editing, multiplex editing, and epigenome modulation, that expand precision and control beyond traditional gene knockouts. These innovations offer significant advantages over conventional breeding, yet challenges remain, including off-target effects, delivery efficiency, and regulatory variability across countries. The review also explores emerging directions such as novel Cas variants and AI-integrated breeding platforms for high-throughput trait discovery. Together, these developments demonstrate the transformative potential of CRISPR technology to reshape agriculture, not only by enhancing productivity and resilience but also by reducing environmental impacts. With responsible implementation, CRISPR-enabled innovations are well-positioned to support global food security and sustainability targets by 2050.</p>\u0000 </div>","PeriodicalId":134,"journal":{"name":"Biotechnology Journal","volume":"20 9","pages":""},"PeriodicalIF":3.1,"publicationDate":"2025-09-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145032376","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Recent Advances in Plant-Based Vaccines: From Molecular Farming Innovations to Global Health Applications 植物基疫苗的最新进展:从分子农业创新到全球健康应用。
IF 3.1 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-09-10 DOI: 10.1002/biot.70120
Yuting Shi, Qingsong Jiao, Xueyun Hu, Ting Jia

Vaccines are pivotal in mitigating infectious diseases by reducing infection rates, severity, and mortality. Plant-derived vaccines—engineered to express antigens in plants, offer distinctive advantages, including cost-efficient production, enhanced biosafety profiles, superior thermal stability, and simplified logistics. Recent advances in plant biotechnology have enabled the large-scale production of plant-based vaccines, positioning them as a viable and transformative alternative to conventional vaccine platforms. This review synthesizes the latest advances, identifies key challenges, and explores future directions in plant-based vaccine development. By highlighting the transformative potential of plant biotechnology in vaccine manufacturing, this work underscores the critical role of plant biology in advancing global health.

疫苗通过降低感染率、严重程度和死亡率,在减轻传染病方面发挥着关键作用。植物源性疫苗经过改造,在植物中表达抗原,具有独特的优势,包括生产成本效益高、生物安全性强、热稳定性好和物流简化。植物生物技术的最新进展使植物基疫苗能够大规模生产,使其成为传统疫苗平台的可行和变革性替代品。这篇综述综合了最新进展,确定了主要挑战,并探讨了植物基疫苗开发的未来方向。通过强调植物生物技术在疫苗生产中的变革潜力,这项工作强调了植物生物学在促进全球健康方面的关键作用。
{"title":"Recent Advances in Plant-Based Vaccines: From Molecular Farming Innovations to Global Health Applications","authors":"Yuting Shi,&nbsp;Qingsong Jiao,&nbsp;Xueyun Hu,&nbsp;Ting Jia","doi":"10.1002/biot.70120","DOIUrl":"10.1002/biot.70120","url":null,"abstract":"<div>\u0000 \u0000 <p>Vaccines are pivotal in mitigating infectious diseases by reducing infection rates, severity, and mortality. Plant-derived vaccines—engineered to express antigens in plants, offer distinctive advantages, including cost-efficient production, enhanced biosafety profiles, superior thermal stability, and simplified logistics. Recent advances in plant biotechnology have enabled the large-scale production of plant-based vaccines, positioning them as a viable and transformative alternative to conventional vaccine platforms. This review synthesizes the latest advances, identifies key challenges, and explores future directions in plant-based vaccine development. By highlighting the transformative potential of plant biotechnology in vaccine manufacturing, this work underscores the critical role of plant biology in advancing global health.</p>\u0000 </div>","PeriodicalId":134,"journal":{"name":"Biotechnology Journal","volume":"20 9","pages":""},"PeriodicalIF":3.1,"publicationDate":"2025-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145032417","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Impact of Serum/Xeno-Free Medium and Cytokine Supplementation on CAR-T Cell Therapy Manufacturing in Stirred Tank Bioreactors 血清/无xeno培养基和细胞因子补充对搅拌槽生物反应器中CAR-T细胞治疗制造的影响
IF 3.1 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-09-09 DOI: 10.1002/biot.70114
Pedro Silva Couto, Dale J. Stibbs, Pierre Springuel, Ursula Schultz, Manuel Effenberger, Stephen Goldrick, Sergio Navarro-Velázquez, Manel Juan, Laura Herbst, Bastian Nießing, Katrin Mestermann, Carmen Sanges, Michael Hudecek, Qasim A. Rafiq

Chimeric antigen receptor T-cell (CAR-T) therapies have demonstrated clinical efficacy in treating haematological malignancies, resulting in multiple regulatory approvals. However, there is a need for robust manufacturing platforms and the use of GMP-aligned reagents to meet the clinical and commercial demands. This study investigates the impact of serum/xeno-free medium (SXFM) and cytokine supplementation on CAR-T cell production in static and agitated culture systems, using 24-well plate G-Rex vessels and 500 mL stirred tank bioreactors (STRs), respectively. Under static conditions, SXFM media supported CAR-T cell expansion with growth kinetics comparable to foetal bovine serum, FBS-based RPMI, irrespective of the cytokine supplementation (IL-2 or the combination of IL-7 and IL-15). In contrast, when the expansion was conducted using STRs, several differences were observed with SXFM. Particularly, when supplemented with IL-2 SXFM, it increased transduction efficiency, supporting accelerated proliferation relative to FBS-containing RPMI. Additionally, SXFM maintained a higher CD4:CD8 ratio at harvest, a feature associated with improved clinical outcomes. No significant differences were observed in the CAR-T cell populations' differentiation status or activation and exhaustion profiles across the conditions. These results suggest that SXFM enables CAR-T cell manufacturing in STRs, improving key quality attributes such as transduction efficiency, growth kinetics, and CD4:CD8 ratio compared to FBS-supplemented medium.

嵌合抗原受体t细胞(CAR-T)疗法已经证明了治疗血液系统恶性肿瘤的临床疗效,并获得了多个监管机构的批准。然而,需要强大的生产平台和使用符合gmp的试剂来满足临床和商业需求。本研究研究了血清/无xeno培养基(SXFM)和细胞因子补充对静态和搅拌培养系统中CAR-T细胞产生的影响,分别使用24孔板G-Rex容器和500 mL搅拌槽生物反应器(STRs)。在静态条件下,无论是否添加细胞因子(IL-2或IL-7和IL-15的组合),SXFM培养基支持CAR-T细胞扩增,其生长动力学与胎牛血清、FBS-based RPMI相当。相比之下,当使用STRs进行扩展时,SXFM观察到一些差异。特别是,当补充IL-2 SXFM时,它提高了转导效率,相对于含有fbs的RPMI,它支持加速增殖。此外,SXFM在收获时保持较高的CD4:CD8比率,这一特征与改善的临床结果相关。在不同条件下,CAR-T细胞群的分化状态或激活和衰竭情况没有观察到显著差异。这些结果表明,与添加fbs的培养基相比,SXFM能够在STRs中制造CAR-T细胞,提高关键质量属性,如转导效率、生长动力学和CD4:CD8比率。
{"title":"Impact of Serum/Xeno-Free Medium and Cytokine Supplementation on CAR-T Cell Therapy Manufacturing in Stirred Tank Bioreactors","authors":"Pedro Silva Couto,&nbsp;Dale J. Stibbs,&nbsp;Pierre Springuel,&nbsp;Ursula Schultz,&nbsp;Manuel Effenberger,&nbsp;Stephen Goldrick,&nbsp;Sergio Navarro-Velázquez,&nbsp;Manel Juan,&nbsp;Laura Herbst,&nbsp;Bastian Nießing,&nbsp;Katrin Mestermann,&nbsp;Carmen Sanges,&nbsp;Michael Hudecek,&nbsp;Qasim A. Rafiq","doi":"10.1002/biot.70114","DOIUrl":"10.1002/biot.70114","url":null,"abstract":"<p>Chimeric antigen receptor T-cell (CAR-T) therapies have demonstrated clinical efficacy in treating haematological malignancies, resulting in multiple regulatory approvals. However, there is a need for robust manufacturing platforms and the use of GMP-aligned reagents to meet the clinical and commercial demands. This study investigates the impact of serum/xeno-free medium (SXFM) and cytokine supplementation on CAR-T cell production in static and agitated culture systems, using 24-well plate G-Rex vessels and 500 mL stirred tank bioreactors (STRs), respectively. Under static conditions, SXFM media supported CAR-T cell expansion with growth kinetics comparable to foetal bovine serum, FBS-based RPMI, irrespective of the cytokine supplementation (IL-2 or the combination of IL-7 and IL-15). In contrast, when the expansion was conducted using STRs, several differences were observed with SXFM. Particularly, when supplemented with IL-2 SXFM, it increased transduction efficiency, supporting accelerated proliferation relative to FBS-containing RPMI. Additionally, SXFM maintained a higher CD4:CD8 ratio at harvest, a feature associated with improved clinical outcomes. No significant differences were observed in the CAR-T cell populations' differentiation status or activation and exhaustion profiles across the conditions. These results suggest that SXFM enables CAR-T cell manufacturing in STRs, improving key quality attributes such as transduction efficiency, growth kinetics, and CD4:CD8 ratio compared to FBS-supplemented medium.</p>","PeriodicalId":134,"journal":{"name":"Biotechnology Journal","volume":"20 9","pages":""},"PeriodicalIF":3.1,"publicationDate":"2025-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/epdf/10.1002/biot.70114","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145012735","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bacterial Glutamine Synthetases as a Novel Metabolic Selection Marker to Improve CHO Cell Culture Performance Through Selection Stringency Modulation 细菌谷氨酰胺合成酶作为一种新的代谢选择标记,通过选择严格调节提高CHO细胞培养性能
IF 3.1 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-09-07 DOI: 10.1002/biot.70119
Daniel Heinzelmann, Nicholas Michelarakis, Franziska Reuss, Benjamin Lindner, Anne R. Karow-Zwick, Joschka Bauer, Benjamin Renner, Simon Fischer, Patrick Schulz, Moritz Schmidt

The use of metabolic selection markers has advanced stable cell line generation, increasing productivity while simultaneously eliminating the need for antibiotic reagents. This study explores the potential of bacterially derived glutamine synthetases (GS) as a novel generation of metabolic selection markers to further enhance CHO cell culture performance. GS-I proteins were extracted from the genomes of enterobacterial and actinomycetes species. Three of these enzymes demonstrated functionality when stably transfected into GS-deficient CHO cells, leading to a 3- to 4-fold increase in antibody titer compared to endogenous GS from Cricetulus griseus. This study indicates that the functionality of bacterial GS enzymes in mammalian cells is determined by solvent accessibility and the geometry of the catalytic binding pocket. Dysfunctional variants showed a less accessible bifunnel. Bacterial GS were evaluated for their bioprocess performance leading to superior stable pool and clone performance. Transcriptome analysis further revealed that regulatory cellular mechanisms were decoupled in a cross-species set-up, reinforcing the suitability of repurposing bacterial enzymes as selection markers in mammalian cell lines. By modulating the selection stringency, an increase in expression performance was achieved without impairing the bioprocess behavior or long-term cell line stability.

代谢选择标记的使用促进了稳定的细胞系生成,提高了生产力,同时消除了对抗生素试剂的需求。本研究探讨了细菌衍生的谷氨酰胺合成酶(GS)作为新一代代谢选择标记的潜力,以进一步提高CHO细胞的培养性能。从肠杆菌和放线菌的基因组中提取GS-I蛋白。其中三种酶在稳定转染到GS缺陷的CHO细胞时显示出功能,导致抗体滴度比来自灰环鼠的内源性GS增加3至4倍。这项研究表明,细菌GS酶在哺乳动物细胞中的功能是由溶剂可及性和催化结合袋的几何形状决定的。功能失调的变体显示了一个不易接近的双通道。对细菌GS进行了生物工艺性能评价,获得了较好的稳定池和克隆性能。转录组分析进一步揭示,调节细胞机制在跨物种设置中解耦,加强了将细菌酶重新用作哺乳动物细胞系选择标记的适用性。通过调节选择的严格程度,在不损害生物过程行为或长期细胞系稳定性的情况下实现了表达性能的提高。
{"title":"Bacterial Glutamine Synthetases as a Novel Metabolic Selection Marker to Improve CHO Cell Culture Performance Through Selection Stringency Modulation","authors":"Daniel Heinzelmann,&nbsp;Nicholas Michelarakis,&nbsp;Franziska Reuss,&nbsp;Benjamin Lindner,&nbsp;Anne R. Karow-Zwick,&nbsp;Joschka Bauer,&nbsp;Benjamin Renner,&nbsp;Simon Fischer,&nbsp;Patrick Schulz,&nbsp;Moritz Schmidt","doi":"10.1002/biot.70119","DOIUrl":"10.1002/biot.70119","url":null,"abstract":"<p>The use of metabolic selection markers has advanced stable cell line generation, increasing productivity while simultaneously eliminating the need for antibiotic reagents. This study explores the potential of bacterially derived glutamine synthetases (GS) as a novel generation of metabolic selection markers to further enhance CHO cell culture performance. GS-I proteins were extracted from the genomes of enterobacterial and actinomycetes species. Three of these enzymes demonstrated functionality when stably transfected into GS-deficient CHO cells, leading to a 3- to 4-fold increase in antibody titer compared to endogenous GS from <i>Cricetulus griseus</i>. This study indicates that the functionality of bacterial GS enzymes in mammalian cells is determined by solvent accessibility and the geometry of the catalytic binding pocket. Dysfunctional variants showed a less accessible bifunnel. Bacterial GS were evaluated for their bioprocess performance leading to superior stable pool and clone performance. Transcriptome analysis further revealed that regulatory cellular mechanisms were decoupled in a cross-species set-up, reinforcing the suitability of repurposing bacterial enzymes as selection markers in mammalian cell lines. By modulating the selection stringency, an increase in expression performance was achieved without impairing the bioprocess behavior or long-term cell line stability.</p>","PeriodicalId":134,"journal":{"name":"Biotechnology Journal","volume":"20 9","pages":""},"PeriodicalIF":3.1,"publicationDate":"2025-09-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/epdf/10.1002/biot.70119","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145012301","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Recent Advances in Cardiac Tissue Engineering: Innovations and Future Directions 心脏组织工程的最新进展:创新和未来方向
IF 3.1 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-09-05 DOI: 10.1002/biot.70116
Adnan Taan Al khafaji, Ali Mohammed Barakat, Akram jooda Al Zaidy, Ali Adnan Taan, Raed Fanoukh Aboqader Al-Aouadi

Cardiac tissue engineering (CTE) is a rapidly evolving field that combines cells, scaffolds, and biofabrication methods to repair damaged heart tissue. New technologies have made it possible to utilize AI in designing cardiac patches and 4D bioprinting to create biomaterials that respond to time. These procedures are a big step forward from traditional ones since they offer more accuracy, flexibility, and the possibility of therapies that are tailored to each patient. This review talks about the latest developments in cellular sources, biomaterials, and bioprinting platforms, as well as immunological, regulatory, and translational issues. We show a realistic way forward for using CTE in clinical settings by looking at both its strengths and weaknesses.

Summary

  • Innovative biomaterials enhance cardiac tissue regeneration.
  • 3D bioprinting revolutionizes cardiac tissue fabrication.
  • Patient-specific stem cell therapies offer personalized solutions.
  • AI and 4D printing advance tissue design and clinical applications.
心脏组织工程(CTE)是一个快速发展的领域,它结合了细胞、支架和生物制造方法来修复受损的心脏组织。新技术使得利用人工智能设计心脏贴片和4D生物打印来制造对时间有反应的生物材料成为可能。这些程序比传统程序向前迈出了一大步,因为它们提供了更高的准确性、灵活性,并且有可能为每位患者量身定制治疗方法。本文综述了细胞来源、生物材料、生物打印平台以及免疫学、调控和转化等方面的最新进展。我们通过观察CTE的优点和缺点,展示了在临床环境中使用CTE的现实方法。创新生物材料促进心脏组织再生。3D生物打印彻底改变了心脏组织的制造。针对患者的干细胞疗法提供个性化的解决方案。人工智能和4D打印促进了组织设计和临床应用。
{"title":"Recent Advances in Cardiac Tissue Engineering: Innovations and Future Directions","authors":"Adnan Taan Al khafaji,&nbsp;Ali Mohammed Barakat,&nbsp;Akram jooda Al Zaidy,&nbsp;Ali Adnan Taan,&nbsp;Raed Fanoukh Aboqader Al-Aouadi","doi":"10.1002/biot.70116","DOIUrl":"10.1002/biot.70116","url":null,"abstract":"<div>\u0000 \u0000 <section>\u0000 \u0000 <p>Cardiac tissue engineering (CTE) is a rapidly evolving field that combines cells, scaffolds, and biofabrication methods to repair damaged heart tissue. New technologies have made it possible to utilize AI in designing cardiac patches and 4D bioprinting to create biomaterials that respond to time. These procedures are a big step forward from traditional ones since they offer more accuracy, flexibility, and the possibility of therapies that are tailored to each patient. This review talks about the latest developments in cellular sources, biomaterials, and bioprinting platforms, as well as immunological, regulatory, and translational issues. We show a realistic way forward for using CTE in clinical settings by looking at both its strengths and weaknesses.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Summary</h3>\u0000 \u0000 <div>\u0000 <ul>\u0000 \u0000 <li>Innovative biomaterials enhance cardiac tissue regeneration.</li>\u0000 \u0000 <li>3D bioprinting revolutionizes cardiac tissue fabrication.</li>\u0000 \u0000 <li>Patient-specific stem cell therapies offer personalized solutions.</li>\u0000 \u0000 <li>AI and 4D printing advance tissue design and clinical applications.</li>\u0000 </ul>\u0000 </div>\u0000 </section>\u0000 </div>","PeriodicalId":134,"journal":{"name":"Biotechnology Journal","volume":"20 9","pages":""},"PeriodicalIF":3.1,"publicationDate":"2025-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144990756","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Organoid-Based Skin and Lung Biofilm Models, a Cutting-Edge Approach for Anti-Biofilm Research: A Mini Review 基于类器官的皮肤和肺生物膜模型:抗生物膜研究的前沿方法:综述
IF 3.1 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-09-04 DOI: 10.1002/biot.70109
Nidhi Verma, Vishnu Agarwal

Bacterial biofilms contribute to 60%–80% of human infections, exhibiting resistance to traditional antibiotic treatment and contributing to chronic, relapsing diseases, particularly in healthcare settings. Traditional in-vitro and in-vivo models often fail to accurately replicate the human microenvironment. This mini review highlights the emerging use of organoid-based models that are three-dimensional, self-organizing structures derived from stem cells. These biomimetic systems closely resemble native organs, providing a physiologically appropriate platform for anti-biofilm efficacy assessment, especially skin and lung, offering a more accurate environment for assessing microbial colonization, persistence, and therapeutic response. This paper summarizes recent advances in the development of effective antimicrobial testing methods for biofilm organoid models, focusing on human-derived proteins and biopolymers. We have discussed how these organoid models, specifically skin and lung organoids, provide insights into host-pathogen dynamics and antimicrobial responses. By bridging the gap between the clinical phase and classical experimental modeling, the organoid model is a powerful tool for transforming and accelerating translational antimicrobial research.

细菌生物膜导致60%-80%的人类感染,表现出对传统抗生素治疗的耐药性,并导致慢性、复发性疾病,特别是在卫生保健环境中。传统的体外和体内模型往往不能准确地复制人体微环境。这篇小型综述强调了基于类器官模型的新兴应用,这些模型是来源于干细胞的三维自组织结构。这些仿生系统与天然器官非常相似,为抗生物膜疗效评估提供了生理上合适的平台,特别是皮肤和肺,为评估微生物定植、持久性和治疗反应提供了更准确的环境。本文综述了生物膜类器官模型有效抗菌检测方法的最新进展,重点介绍了人源性蛋白质和生物聚合物。我们已经讨论了这些类器官模型,特别是皮肤和肺类器官,如何为宿主-病原体动力学和抗菌反应提供见解。通过弥合临床阶段和经典实验模型之间的差距,类器官模型是转化和加速转化抗微生物研究的有力工具。
{"title":"Organoid-Based Skin and Lung Biofilm Models, a Cutting-Edge Approach for Anti-Biofilm Research: A Mini Review","authors":"Nidhi Verma,&nbsp;Vishnu Agarwal","doi":"10.1002/biot.70109","DOIUrl":"10.1002/biot.70109","url":null,"abstract":"<div>\u0000 \u0000 <p>Bacterial biofilms contribute to 60%–80% of human infections, exhibiting resistance to traditional antibiotic treatment and contributing to chronic, relapsing diseases, particularly in healthcare settings. Traditional in-vitro and in-vivo models often fail to accurately replicate the human microenvironment. This mini review highlights the emerging use of organoid-based models that are three-dimensional, self-organizing structures derived from stem cells. These biomimetic systems closely resemble native organs, providing a physiologically appropriate platform for anti-biofilm efficacy assessment, especially skin and lung, offering a more accurate environment for assessing microbial colonization, persistence, and therapeutic response. This paper summarizes recent advances in the development of effective antimicrobial testing methods for biofilm organoid models, focusing on human-derived proteins and biopolymers. We have discussed how these organoid models, specifically skin and lung organoids, provide insights into host-pathogen dynamics and antimicrobial responses. By bridging the gap between the clinical phase and classical experimental modeling, the organoid model is a powerful tool for transforming and accelerating translational antimicrobial research.</p>\u0000 </div>","PeriodicalId":134,"journal":{"name":"Biotechnology Journal","volume":"20 9","pages":""},"PeriodicalIF":3.1,"publicationDate":"2025-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144935296","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Integrating FRET and Molecular Dynamics Simulation for Single-Molecule Aptameric Detection of Staphylococcus aureus IsdA Surface Protein 基于FRET和分子动力学模拟的金黄色葡萄球菌IsdA表面蛋白单分子适配体检测
IF 3.1 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-09-04 DOI: 10.1002/biot.70101
Chamika Harshani Algama, Tracy A. Bruce-Tagoe, Joy Adetunji, Tongye Shen, Michael K. Danquah, Soma Dhakal

Staphylococcus aureus is ranked among the top five most common foodborne pathogens affecting public health and the economy worldwide. To improve detection and reduce diagnostic burdens, several detection methods from traditional culture-based techniques to biosensing platforms have evolved. Among several markers, surface proteins are considered to be the most important markers due to the specific roles they play in the survival and colonization of the bacterium on hosts. Here, we have developed a detection platform for a key surface protein, iron-regulated surface determinant protein A (IsdA), using a combination of computationally developed aptamer and single-molecule fluorescence resonance energy transfer (smFRET). Computationally generated RNA aptamer incorporated into the FRET-based sensor show high specificity detection of IsdA with a detection limit down to 0.6 pM and dynamic range extending to ∼10 nM. Molecular dynamics (MD) simulations show distinct conformational flexibility of the unbound aptamer and a reduced flexibility for the aptamer-IsdA complex, corresponding to the experimentally observed higher FRET efficiencies. The FRET-based single-molecule aptasensor that we developed has great potential for rapid monitoring S. aureus. Further, the developed approach has the potential to be broadly applicable across diverse fields of biotechnology including environmental monitoring, forensic analysis, and clinical diagnostics.

金黄色葡萄球菌是影响全球公共卫生和经济的五大最常见食源性病原体之一。为了改善检测和减轻诊断负担,从传统的基于培养的技术到生物传感平台的几种检测方法已经发展。在几种标记中,表面蛋白被认为是最重要的标记,因为它们在细菌在宿主上的生存和定植中起着特定的作用。在这里,我们开发了一个关键表面蛋白的检测平台,铁调节表面决定蛋白a (IsdA),使用计算开发的适体和单分子荧光共振能量转移(smFRET)的组合。计算生成的RNA适体结合到基于fret的传感器中,显示出对IsdA的高特异性检测,检测限低至0.6 pM,动态范围扩展到~ 10 nM。分子动力学(MD)模拟显示,未结合的适体具有明显的构象灵活性,而适体- isda复合物的灵活性降低,这与实验观察到的更高的FRET效率相对应。我们开发的基于fret的单分子配体传感器在快速监测金黄色葡萄球菌方面具有很大的潜力。此外,开发的方法有可能广泛适用于生物技术的各个领域,包括环境监测、法医分析和临床诊断。
{"title":"Integrating FRET and Molecular Dynamics Simulation for Single-Molecule Aptameric Detection of Staphylococcus aureus IsdA Surface Protein","authors":"Chamika Harshani Algama,&nbsp;Tracy A. Bruce-Tagoe,&nbsp;Joy Adetunji,&nbsp;Tongye Shen,&nbsp;Michael K. Danquah,&nbsp;Soma Dhakal","doi":"10.1002/biot.70101","DOIUrl":"10.1002/biot.70101","url":null,"abstract":"<p><i>Staphylococcus aureus</i> is ranked among the top five most common foodborne pathogens affecting public health and the economy worldwide. To improve detection and reduce diagnostic burdens, several detection methods from traditional culture-based techniques to biosensing platforms have evolved. Among several markers, surface proteins are considered to be the most important markers due to the specific roles they play in the survival and colonization of the bacterium on hosts. Here, we have developed a detection platform for a key surface protein, iron-regulated surface determinant protein A (IsdA), using a combination of computationally developed aptamer and single-molecule fluorescence resonance energy transfer (smFRET). Computationally generated RNA aptamer incorporated into the FRET-based sensor show high specificity detection of IsdA with a detection limit down to 0.6 pM and dynamic range extending to ∼10 nM. Molecular dynamics (MD) simulations show distinct conformational flexibility of the unbound aptamer and a reduced flexibility for the aptamer-IsdA complex, corresponding to the experimentally observed higher FRET efficiencies. The FRET-based single-molecule aptasensor that we developed has great potential for rapid monitoring <i>S. aureus</i>. Further, the developed approach has the potential to be broadly applicable across diverse fields of biotechnology including environmental monitoring, forensic analysis, and clinical diagnostics.</p>","PeriodicalId":134,"journal":{"name":"Biotechnology Journal","volume":"20 9","pages":""},"PeriodicalIF":3.1,"publicationDate":"2025-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/epdf/10.1002/biot.70101","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144935295","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Biotechnology Journal
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1