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Hyaluronidase Inhibitory Activity of Polysaccharides Separated from a Fermented Beverage of Plant Extracts. 植物提取物发酵饮料多糖透明质酸酶抑制活性研究。
IF 1.2 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-05-20 eCollection Date: 2025-01-01 DOI: 10.5458/jag.7202202
Hideki Okada, Akira Yamamori, Naoki Kawazoe, Keiji Ueno, Shuichi Onodera

Super Ohtaka®, a fermented beverage of plant extracts, is prepared from approximately 50 kinds of vegetables and fruits is a naturally fermented mainly by lactic acid bacteria (Leuconostoc spp.) and yeast (Zygosaccharomyces spp.). In this study, we separated water-soluble polysaccharides from Super Ohtaka® using dialysis and chromatography, yielding four polysaccharide fractions. The polysaccharide fraction designated as OEP3 exhibited hyaluronidase inhibitory activity. The half-maximal inhibitory concentration was 860 µg/mL. This polysaccharide not only stimulated macrophages but also inhibited hyaluronidase activity and showed weak 1,1-diphenyl-2-picrylhydrazyl radical-scavenging activity.

Super Ohtaka®是一种植物提取物发酵饮料,由大约50种蔬菜和水果制成,主要由乳酸菌(Leuconostoc spp.)和酵母(Zygosaccharomyces spp.)自然发酵而成。在本研究中,我们用透析和色谱分离了Super Ohtaka®的水溶性多糖,得到了四个多糖部分。多糖部分命名为OEP3,显示出透明质酸酶抑制活性。半最大抑制浓度为860µg/mL。该多糖不仅能刺激巨噬细胞,还能抑制透明质酸酶活性,并表现出较弱的1,1-二苯基-2-苦酰肼自由基清除活性。
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引用次数: 0
Crystal Structure of CcGH131B, a Protein Belonging to Glycoside Hydrolase Family 131 from the Basidiomycete Coprinopsis cinerea. 担子菌Coprinopsis cinerea糖苷水解酶家族131蛋白CcGH131B的晶体结构
IF 1.2 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-05-20 eCollection Date: 2025-01-01 DOI: 10.5458/jag.7202104
Yuta Shiojima, Ryotaro Sano, Takuma Kozono, Atsushi Nishikawa, Yuka Kojima, Makoto Yoshida, Naoki Sunagawa, Kiyohiko Igarashi, Takashi Tonozuka

Glycoside hydrolase family 131 (GH131) proteins are found in oomycetes, ascomycetes, and basidiomycetes, and have been reported to hydrolyze various β-glucan polysaccharides. Coprinopsis cinerea, a model basidiomycete, contains two GH131 proteins, CcGH131A and CcGH131B. This study focuses on the structural and functional properties of CcGH131B, a protein that lacks the carbohydrate bonding module 1 (CBM1) domain present in CcGH131A. The crystal structure of CcGH131B was determined. The structure displayed a β-jelly roll fold with extra loops and α-helices, resulting in a deeper substrate-binding groove compared to CcGH131A and also PaGluc131A, a GH131 protein from Podospora anserina. A cellobiose-bound structure of the E161A mutant, in which the potential catalytic residue Glu161 was substituted with Ala, showed that the region of the minus subsites bind cellulose. In contrast, the region of the plus subsites mainly consists of hydrophobic amino acid residues and appeared to interact with hydrophobic molecules rather than with carbohydrates. Analysis using native affinity polyacrylamide gel electrophoresis showed that CcGH131B interacted with cellulosic polysaccharides such as methylcellulose and carboxymethylcellulose, while the protein exhibited no detectable enzymatic activity under the tested conditions. These results suggest that the substrate specificity of CcGH131B is likely to be different from those of CcGH131A and PaGluc131A.

糖苷水解酶家族131 (GH131)蛋白存在于卵菌、子囊菌和担子菌中,据报道可水解各种β-葡聚糖多糖。Coprinopsis cinerea是一种模式担子菌,含有两种GH131蛋白CcGH131A和CcGH131B。本研究的重点是CcGH131B的结构和功能特性,CcGH131A缺乏碳水化合物键合模块1 (CBM1)结构域。测定了CcGH131B的晶体结构。与CcGH131A和PaGluc131A相比,该结构显示出带有额外环和α-螺旋的β-果冻卷折叠,导致底物结合槽更深。E161A突变体的纤维素二糖结合结构,其中潜在的催化残基Glu161被Ala取代,表明负亚位区域与纤维素结合。相反,正亚位区域主要由疏水氨基酸残基组成,似乎与疏水分子相互作用,而不是与碳水化合物相互作用。天然亲和聚丙烯酰胺凝胶电泳分析显示,CcGH131B与纤维素多糖(如甲基纤维素和羧甲基纤维素)相互作用,而在测试条件下,该蛋白没有可检测到的酶活性。这些结果表明,CcGH131B的底物特异性可能与CcGH131A和PaGluc131A不同。
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引用次数: 0
Production of Isoprimeverose from Xyloglucan Using Aspergillus oryzae. 利用米曲霉从木葡聚糖中生产异戊糖。
IF 1.2 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-20 eCollection Date: 2025-01-01 DOI: 10.5458/jag.7201202
Tomohiko Matsuzawa, Naoki Shimada, Shimma Fujiwa

Isoprimeverose [α-D-xylopyranosyl-(1→6)-D-glucose] is produced from xyloglucan using the cooperative action of glycoside hydrolases including isoprimeverose-producing oligoxyloglucan hydrolase and β-galactosidase in Aspergillus oryzae. This study investigated A. oryzae strains and culture conditions suitable for isoprimeverose production from xyloglucan. Each strain of A. oryzae had a different ability to degrade xyloglucans. When an A. oryzae strain with high xyloglucan-degradation activity was cultured in a medium containing partially degraded xyloglucan as the carbon source, the production of glycoside hydrolases that degrade xyloglucan into isoprimeverose was highly induced. Our procedure efficiently produced isoprimeverose from xyloglucan without any genetically modified microorganisms or purification of enzymes.

异丙糖[α-D-xylopyranosyl-(1→6)- d -glucose]是由木葡聚糖在异丙糖生成寡氧葡聚糖水解酶和β-半乳糖苷酶等糖苷水解酶的协同作用下产生的。研究了以木葡聚糖为原料生产异戊糖的米芽孢杆菌菌株及其适宜的培养条件。各菌株对木葡聚糖的降解能力不同。在以部分降解木葡聚糖为碳源的培养基中培养具有高木葡聚糖降解活性的a . oryzae菌株,可诱导产生将木葡聚糖降解为异戊糖的糖苷水解酶。我们的程序有效地从木葡聚糖生产异戊糖,没有任何转基因微生物或纯化酶。
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引用次数: 0
One-pot Enzymatic Synthesis of Sophorose from Sucrose and Glucose. 蔗糖和葡萄糖一锅酶法合成槐糖。
IF 1.2 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-20 eCollection Date: 2025-01-01 DOI: 10.5458/jag.7201201
Yuka Tatebe, Yuri Yamamoto, Naoto Isono

In this study, we developed a method to synthesize sophorose using three enzymes-sucrose phosphorylase from Leuconostoc mesenteroides, 1,2-β-oligoglucan phosphorylase from Enterococcus italicus, and exo β-1,2-glucooligosaccharide sophorohydrolase from Parabacteroides distasonis-in a one-pot reaction, employing inexpensive starting materials. After optimization, a reaction was carried out using 5 mM glucose, 250 mM sucrose, 10 mM inorganic phosphate, and enzyme concentrations of 5 µg/mL sucrose phosphorylase, 20 µg/mL 1,2-β-oligoglucan phosphorylase, and 50 µg/mL exo β-1,2-glucooligosaccharide sophorohydrolase at 30 °C for 48 h, yielding 108 mM sophorose. Following yeast treatment, sophorose was purified by size-exclusion chromatography with a final yield of 45 % based on the amount of sucrose used as the donor substrate.

在这项研究中,我们开发了一种方法,利用三种酶——来自肠系膜白葡萄球菌的蔗糖磷酸化酶、来自意大利肠球菌的1,2-β-低聚葡聚糖磷酸化酶和来自异裂副杆菌的外β-1,2-葡萄糖低聚葡聚糖水解酶——在一锅反应中合成槐糖,原料便宜。优化后,以5 mM葡萄糖、250 mM蔗糖、10 mM无机磷酸盐为原料,酶浓度分别为5µg/mL蔗糖磷酸化酶、20µg/mL 1,2-β-低聚葡聚糖磷酸化酶和50µg/mL外显子β-1,2-葡萄糖低聚葡聚糖皂荚水解酶,在30℃下反应48 h,得到108 mM皂荚糖。酵母处理后,通过尺寸排除层析纯化苦参,最终产率为45%,以蔗糖作为供体底物的量为基础。
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引用次数: 0
Effects of Water Activity and Temperature on the Caking Properties of Amorphous Carbohydrate Powders. 水活度和温度对非晶碳水化合物粉末结块性能的影响。
IF 1.2 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-20 eCollection Date: 2025-01-01 DOI: 10.5458/jag.7201103
Sukritta Anantawittayanon, Takumi Mochizuki, Kiyoshi Kawai

Water sorption reduces the glass transition temperature (T g) of amorphous carbohydrate powders due to water plasticization. Caking of amorphous powder occurs when T g decreases below the storage temperature (T), that is, when the glass-to-rubber transition occurs. Although glass-to-rubber transition also occurs when T is greater than T g, knowledge regarding the caking of amorphous powders induced by T elevation is limited. Thus, caking properties were investigated using amorphous carbohydrate powders with varying water activity (a w) values prepared at 25 °C, stored at a higher temperature, and then returned to 25 °C (T-cycled samples) for storage. Maltodextrin and glucose mixtures at weight ratios of 0, 0.1, and 0.2 glucose were employed. The caking behavior of T-cycled powders with high a w values was similar to that of a w-cycled samples (dried powders were stored under various a w conditions and then returned to the dry condition via vacuum-drying) reported previously. T-cycled powders with a low a w value, by contrast, were resistant to caking even in the rubbery state. This suggests that water molecules support the progression of caking as the binder under high-a w conditions. To analyze the hydration level at which water molecules begin to act as a binder for caking, determination of the multilayer adsorbed water content and multilayer adsorbed a w values is proposed. The fracture stress increased with increases in T - T g, depending on the sample. The binding effect of water also contributed to the formation of a harder cake.

由于水的塑化作用,水的吸附降低了非晶态碳水化合物粉末的玻璃化转变温度。当T g低于贮存温度(T)时,即玻璃向橡胶转变时,非晶态粉末发生结块。虽然当T大于T g时也会发生玻璃到橡胶的转变,但关于T升高引起的非晶粉末结块的知识有限。因此,研究人员使用在25°C下制备的具有不同水活度(a w)值的无定形碳水化合物粉末,在更高温度下储存,然后返回25°C (t循环样品)储存,以研究结块特性。采用重量比为0、0.1和0.2葡萄糖的麦芽糊精和葡萄糖混合物。高a w值的t循环粉末的结块行为与之前报道的w循环样品相似(干燥的粉末在不同的a w条件下储存,然后通过真空干燥返回干燥条件)。相比之下,具有低w值的t循环粉末即使在橡胶状态下也能抵抗结块。这表明水分子作为粘结剂在高w条件下支持结块的进展。为了分析水分子开始作为结块粘合剂时的水化水平,提出了测定多层吸附水含量和多层吸附水w值的方法。断裂应力随T - tg的增大而增大,随试样的不同而不同。水的结合作用也有助于形成更硬的蛋糕。
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引用次数: 0
Kinetics of Structural Changes in Starch Retrogradation Observed by Simultaneous SANS/FTIR-ATR Measurements. 用SANS/FTIR-ATR同时测量观察淀粉退化结构变化动力学。
IF 1.2 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-20 eCollection Date: 2025-01-01 DOI: 10.5458/jag.7201102
Yoshinobu Hirata, Fumitoshi Kaneko, Aurel Radulescu, Takahisa Nishizu, Nakako Katsuno, Teppei Imaizumi, Ryuhei Motokawa, Takayuki Kumada, Hiroshi Nakagawa

Because of the complicated hierarchical structure of starch, starch retrogradation is usually evaluated by combining several structural analysis methods covering various spatial scales. However, structural analyses are typically performed individually, making correlating the structural changes at different spatial scales challenging. Therefore, this study used a simultaneous measurement system comprising small-angle neutron scattering (SANS)/Fourier-transform infrared (FTIR)-attenuated total reflection (ATR) to record multiple structural changes in potato starch during retrogradation. In the SANS patterns, the shoulder-like peak became more pronounced with time. The peak intensity, I max, representing the amount of ordered semicrystalline structures, increased over time, revealing the orderly reassembly of starch on the nanoscale upon retrogradation. In the FTIR-ATR spectra, the ratio of absorptions (R 1042/1016) at 1,042 and 1,016 cm-1, indicating the short-range ordered structure in starch, increased during retrogradation. Therefore, the double-helix structures were reformed during retrogradation. The rate constant of the kinetic change for R 1042/1016 was larger than for I max; thus, changes in the short-range ordered structure of starch converged before the changes in the semicrystalline structure. These results suggest that the formation of double-helix structures of the amylopectin side chain and the structural change of its ordered arrangement could occur in stages during retrogradation.

由于淀粉具有复杂的层次结构,对淀粉降解的评价通常是综合多种覆盖不同空间尺度的结构分析方法。然而,结构分析通常是单独进行的,这使得在不同空间尺度上关联结构变化具有挑战性。因此,本研究采用由小角中子散射(SANS)/傅立叶变换红外(FTIR)衰减全反射(ATR)组成的同步测量系统来记录马铃薯淀粉在退化过程中的多种结构变化。在SANS模式中,肩部峰值随着时间的推移变得更加明显。峰值强度,imax,代表有序半晶结构的数量,随着时间的推移而增加,揭示了淀粉在纳米级上的有序重组。在FTIR-ATR光谱中,淀粉在1042 cm-1和1016 cm-1处的吸收比(r1042 /1016)随着降解而增加,表明淀粉具有较短的有序结构。因此,在退化过程中,双螺旋结构发生了重组。r1042 /1016的动力学变化速率常数大于imax;因此,淀粉的短程有序结构的变化在半晶结构的变化之前收敛。这些结果表明,支链淀粉侧链的双螺旋结构的形成及其有序排列的结构变化可能在退化过程中分阶段发生。
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引用次数: 0
Enzymatic Synthesis of a Novel Short Linear Maltodextrin from Starch. 酶法合成一种新型短线性淀粉糊精。
IF 1.2 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-02-20 eCollection Date: 2025-01-01 DOI: 10.5458/jag.7201101
Atsushi Kawano, Tomohiro Yamamoto, Yuya Shinagawa, Isao Hanashiro, Hironori Yoshida

Short linear maltodextrin (SLMD) was synthesized from starch via the combined action of branching and debranching enzymes. The number-average degree of polymerization and number-average chain length of SLMD were 8.49 ± 0.21 and 8.52 ± 0.60, respectively, indicating that it consists of linear chains. In gel permeation chromatography analyses, SLMD showed a single peak at a molecular weight of 1,200. SLMD consisted mainly of linear saccharides with a degree of polymerization of 6-12, without high molecular weight α-glucans or small malto-oligosaccharides. SLMD had a much higher blue value and a longer λmax compared with those of commercial dextrose equivalent (DE) 13 maltodextrin. While the DE 13 maltodextrin solution remained clear, an SLMD solution became turbid upon cooling, with the turbidity reversing upon heating. This interconversion was reproducible. SLMD absorbed moisture only to a limited extent, even under high relative humidity, and remained solid without noticeable viscousness. These results demonstrate the novelty and distinct properties of SLMD compared with those of other maltodextrins available on the market, implying its potential for various applications in the food industry.

以淀粉为原料,通过支链酶和脱链酶的共同作用合成了短线性麦芽糊精(SLMD)。SLMD的数平均聚合度和数平均链长分别为8.49±0.21和8.52±0.60,表明其为线性链。在凝胶渗透色谱分析中,SLMD在分子量为1200时显示单峰。SLMD主要由聚合度为6-12的线性糖组成,没有高分子量的α-葡聚糖或小的麦芽寡糖。SLMD的蓝值和λmax均高于商用葡萄糖(DE) 13麦芽糖糊精。虽然de13麦芽糊精溶液保持清澈,但SLMD溶液在冷却时变得浑浊,在加热时浑浊度反转。这种相互转化是可重复的。即使在较高的相对湿度下,SLMD也只能在有限的程度上吸收水分,并且保持固体状态,没有明显的粘性。这些结果表明SLMD与市场上其他麦芽糊精相比具有新颖性和独特的特性,这意味着它在食品工业中的各种应用潜力。
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引用次数: 0
Construction of the Thermostable D-Allulose 3-Epimerase from Arthrobacter globiformis M30 by Protein Engineering Method. 用蛋白质工程方法构建球形节杆菌M30耐热D-Allulose 3- epimase
IF 1.2 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-20 eCollection Date: 2024-01-01 DOI: 10.5458/jag.jag.JAG-2024_0003
Kouhei Ohtani, Kensaku Shimada, Pushpa Kiran Gullapalli, Kazuhiko Ishikawa

D-Allulose 3-epimerase catalyzes C-3 epimerization between D-fructose and D-allulose was found in Arthrobacter globiformis strain M30. The enzyme gene was cloned, and its recombinant enzyme and the mutant variants were expressed in E. coli. Using the information of the sequence and model structure, we succeed in the improvement of melting temperature for the enzyme without significant loss of the enzyme activity by protein engineering method. The melting temperatures were increased by 2.7, 2.1, 3.7, 5.1, and 8.0 c[C for the mutants Glu75Pro, Arg137Lys, Ala200Lys, Ala270Lys, and Val237Ile, respectively. Each effect of the mutation was independent and additive. By integrating the above mutations, we constructed a thermostable mutant that exhibits a melting temperature 12 c[C higher than wild type, and remains stable at 65 c[C for 2 h. These highly stable properties suggest that the thermostable enzymes represent an ideal enzyme candidate for the industrial production of D-allulose.

在球形节杆菌菌株M30中发现了D-Allulose 3-外聚酶催化d -果糖和D-Allulose之间的C-3外聚反应。克隆了该酶基因,并在大肠杆菌中表达了其重组酶和突变体。利用序列信息和模型结构信息,利用蛋白质工程方法,在不显著降低酶活性的前提下,成功地提高了酶的熔化温度。突变体Glu75Pro、Arg137Lys、Ala200Lys、Ala270Lys和Val237Ile的熔化温度分别提高了2.7、2.1、3.7、5.1和8.0℃。每个突变的影响是独立的和加性的。通过整合上述突变,我们构建了一个耐热突变体,其熔融温度比野生型高12℃,并在65℃下保持稳定2小时。这些高度稳定的特性表明,这种耐热酶是工业生产D-allulose的理想酶候选物。
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引用次数: 0
Efficient Synthesis of β-Glucose 1-Phosphate through Enzymatic Phosphorolysis and Baker's Yeast Fermentation. 酶解和酵母发酵高效合成β-葡萄糖1-磷酸的研究。
IF 1.2 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-20 eCollection Date: 2024-01-01 DOI: 10.5458/jag.jag.JAG-2024_0008
Sofia Koltovskaia, Akane Ohtao, Motomitsu Kitaoka, Hiroyuki Nakai, Takanori Nihira

β-Glucose 1-phosphate (βGlc1P) is a donor substrate in the synthesis of various α-glucosides by glycoside phosphorylases belonging to the glycoside hydrolase family 65. This study presents an efficient synthesis of βGlc1P combining enzymatic phosphorolysis of inexpensive maltose and baker's yeast fermentation to bias the equilibrium toward maltose phosphorolysis by removing released glucose. Mass production of βGlc1P was obtained in a 2 L reaction mixture initially containing 500 mM maltose and inorganic phosphate, with a yield of 76 %. βGlc1P was isolated from the reaction mixture by crystallization after electrodialysis to obtain 181 g of βGlc1P as a bis(cyclohexylammonium) salt.

β-葡萄糖1-磷酸(βGlc1P)是属于糖苷水解酶家族的糖苷磷酸化酶合成各种α-糖苷的供体底物65。本研究提出了一种结合廉价麦芽糖酶解和面包酵母发酵的高效合成βGlc1P的方法,通过去除释放的葡萄糖,使平衡偏向麦芽糖磷解。在初始含有500 mM麦芽糖和无机磷酸盐的2 L反应混合物中,获得了βGlc1P的大量生产,产率为76%。电渗析后结晶,从反应混合物中分离出βGlc1P,得到181 g的二(环己基铵)盐βGlc1P。
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引用次数: 0
Mechanism-based Modelling for Fitting the Double-exponential Progress Curves of Cellulase Reaction. 基于机理的纤维素酶反应双指数过程曲线拟合模型。
IF 1.2 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-20 eCollection Date: 2024-01-01 DOI: 10.5458/jag.jag.JAG-2024_0007
Kiyohiko Igarashi, Takahiro Ezaki, Masahiro Samejima

Enzymatic hydrolysis of cellulosic biomass is a complex process involving many factors, including multiple enzymes, heterogeneous substrates, and multi-step enzyme reactions. Cellulase researchers have conventionally used a double-exponential equation to fit the experimental time course of product formation, but no theoretical basis for this has been established. Here we present a mechanism-based equation that fits well the progress curves of cellulase reaction, incorporating the concepts of non-productive and productive binding on the cellulose surface and processivity. The derived equation is double exponential. Our findings indicate that the reaction mechanism of cellulase itself can account for the double-exponential nature of the progress curve independently of other factors that may contribute, such as substrate heterogeneity and involvement of other enzymes.

纤维素生物质的酶解是一个涉及多种酶、异质底物和多步骤酶反应的复杂过程。纤维素酶研究人员通常使用双指数方程来拟合产物形成的实验时间过程,但没有建立理论基础。在这里,我们提出了一个基于机理的方程,它很好地拟合了纤维素酶反应的过程曲线,结合了纤维素表面的非生产性和生产性结合以及加工能力的概念。导出的方程是二重指数方程。我们的研究结果表明,纤维素酶本身的反应机制可以独立于其他可能的因素(如底物异质性和其他酶的参与)来解释进展曲线的双指数性质。
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引用次数: 0
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Journal of applied glycoscience
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