Pub Date : 2025-08-20eCollection Date: 2025-01-01DOI: 10.5458/jag.7203101
Maho Ogami, Kanji Aoyagi, Tomonari Otsuki, Hidetaka Uehara, Kiyoshi Kawai
The purpose of this study was to clarify the effect of surfactant-added oils on the glass transition as a function of water content, fracture behavior, color, and crude oil content of the fried coatings (post-fried wheat flour-water mixture) obtained under various frying conditions (at 150-180 °C for 1.0-4.5 min). Polyglycerol oleic acid esters having hydrophile-lipophile balances of 7.4 (hydrophobic) and 13.3 (hydrophilic) were employed, and canola oils with and without 0.5 % (w/w) surfactants were used for frying. The samples obtained at 170 °C became glassy after frying times of 1.4 min, 1.9 min, and 2.4 min in the hydrophilic surfactant-added oil, hydrophobic surfactant-added oil, and surfactant-free oil, respectively. The glassy samples showed brittle fracture behavior, and the maximum fracture force for the glassy samples obtained using the surfactant-added oils was lower than that obtained using surfactant-free oil. The frying time to obtain glassy samples decreased with increasing frying temperature, and the frying time in the hydrophilic surfactant-added oil was reduced by 60-80 % compared to the surfactant-free oil. When the browning color of the glassy samples obtained for the shortest frying time was compared at each temperature, the samples fried in the hydrophilic surfactant-added oil showed less browning than those fried in the surfactant-free oil due to the reduction of frying time. There were no significant differences in the crude oil content between surfactant-free oil (69.9-105.7 g/100 g-defatted DM, dry matter) and the hydrophilic surfactant-added oil (78.6-115.5 g/100 g-defatted DM) at each frying temperature (except for 150 °C).
{"title":"Effect of Surfactant-Added Oil on the Physical Properties of Fried Coating for Deep-Fried Foods Obtained under Various Frying Conditions.","authors":"Maho Ogami, Kanji Aoyagi, Tomonari Otsuki, Hidetaka Uehara, Kiyoshi Kawai","doi":"10.5458/jag.7203101","DOIUrl":"10.5458/jag.7203101","url":null,"abstract":"<p><p>The purpose of this study was to clarify the effect of surfactant-added oils on the glass transition as a function of water content, fracture behavior, color, and crude oil content of the fried coatings (post-fried wheat flour-water mixture) obtained under various frying conditions (at 150-180 °C for 1.0-4.5 min). Polyglycerol oleic acid esters having hydrophile-lipophile balances of 7.4 (hydrophobic) and 13.3 (hydrophilic) were employed, and canola oils with and without 0.5 % (w/w) surfactants were used for frying. The samples obtained at 170 °C became glassy after frying times of 1.4 min, 1.9 min, and 2.4 min in the hydrophilic surfactant-added oil, hydrophobic surfactant-added oil, and surfactant-free oil, respectively. The glassy samples showed brittle fracture behavior, and the maximum fracture force for the glassy samples obtained using the surfactant-added oils was lower than that obtained using surfactant-free oil. The frying time to obtain glassy samples decreased with increasing frying temperature, and the frying time in the hydrophilic surfactant-added oil was reduced by 60-80 % compared to the surfactant-free oil. When the browning color of the glassy samples obtained for the shortest frying time was compared at each temperature, the samples fried in the hydrophilic surfactant-added oil showed less browning than those fried in the surfactant-free oil due to the reduction of frying time. There were no significant differences in the crude oil content between surfactant-free oil (69.9-105.7 g/100 g-defatted DM, dry matter) and the hydrophilic surfactant-added oil (78.6-115.5 g/100 g-defatted DM) at each frying temperature (except for 150 °C).</p>","PeriodicalId":14999,"journal":{"name":"Journal of applied glycoscience","volume":"72 3","pages":"7203101"},"PeriodicalIF":1.4,"publicationDate":"2025-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12423754/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145064604","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Chitin is a cell wall structural component of many fungi and is important for mycelium growth. Therefore, enzymes like chitinase which break down chitin, are likely important in fungi during morphological changes. Irpex lacteus, a white-rot fungus isolated from wood-rotting fungi, produces several chitinases. Although it produces a range of chitinases, there are currently no characterization reports exploring them, despite the interest and body of published works evaluating carbohydrate degrading enzymes. In this study, IlChi18C was cloned and recombinantly produced using Pichia pastoris as a host. Properties of purified IlChi18C were determined, revealing an optimal pH of 5.0 and temperature of 50 °C when using pNP-N,N'-diacetyl-β-D-chitobioside (pNP-(GlcNAc)2) as a substrate. It is activated in the presence of metal ions such as Mg2+, Ca2+, and Mn2+, but inhibited by DMSO, EtOH, and SDS. The Km and Vmax of IlChi18C for this substrate are 3.48 mM and 5.46 µM min-1, respectively. Using pNP-(GlcNAc)2 and chitin powder as substrates, IlChi18C predominantly exhibited exo-type chitinase activity, releasing chitobiose from the non-reducing ends of chitin chains. It was also observed that this enzyme acts on the fruiting body of Flammulina velutipes, releasing chitobiose as the main product.
几丁质是许多真菌的细胞壁结构成分,对菌丝生长很重要。因此,分解几丁质的几丁质酶等酶在真菌形态变化过程中可能很重要。一种从木材腐烂真菌中分离出来的白腐菌,能产生几种几丁质酶。虽然它产生一系列几丁质酶,但目前还没有对它们进行鉴定的报道,尽管对碳水化合物降解酶有兴趣和大量已发表的研究工作。本研究以毕赤酵母为宿主,克隆并重组了IlChi18C。以pNP-N,N′-二乙酰基-β- d -壳聚糖(pNP-(GlcNAc)2)为底物,测定了纯化后的IlChi18C的性能,发现其最适pH为5.0,温度为50℃。它在金属离子如Mg2+、Ca2+和Mn2+的存在下被激活,但被DMSO、EtOH和SDS抑制。IlChi18C在该衬底上的Km和Vmax分别为3.48 mM和5.46µM min-1。IlChi18C以pNP-(GlcNAc)2和几丁质粉为底物,主要表现出外显型几丁质酶活性,从几丁质链的非还原端释放几丁糖。还观察到该酶作用于金针菇子实体,主要产物为壳聚糖。
{"title":"Characterization of Chitinase from White-Rot Fungus <i>Irpex lacteus</i> NK-1.","authors":"Takemi Kamijo, Chika Okuda, Masahiro Mizuno, Yoshihiko Amano","doi":"10.5458/jag.7202107","DOIUrl":"10.5458/jag.7202107","url":null,"abstract":"<p><p>Chitin is a cell wall structural component of many fungi and is important for mycelium growth. Therefore, enzymes like chitinase which break down chitin, are likely important in fungi during morphological changes. <i>Irpex lacteus</i>, a white-rot fungus isolated from wood-rotting fungi, produces several chitinases. Although it produces a range of chitinases, there are currently no characterization reports exploring them, despite the interest and body of published works evaluating carbohydrate degrading enzymes. In this study, <i>Il</i>Chi18C was cloned and recombinantly produced using <i>Pichia pastoris</i> as a host. Properties of purified <i>Il</i>Chi18C were determined, revealing an optimal pH of 5.0 and temperature of 50 °C when using <i>p</i>NP-<i>N,N</i>'-diacetyl-β-D-chitobioside (<i>p</i>NP-(GlcNAc)<sub>2</sub>) as a substrate. It is activated in the presence of metal ions such as Mg<sup>2+</sup>, Ca<sup>2+</sup>, and Mn<sup>2+</sup>, but inhibited by DMSO, EtOH, and SDS. The Km and Vmax of <i>Il</i>Chi18C for this substrate are 3.48 mM and 5.46 µM min<sup>-1</sup>, respectively. Using <i>p</i>NP-(GlcNAc)<sub>2</sub> and chitin powder as substrates, <i>Il</i>Chi18C predominantly exhibited exo-type chitinase activity, releasing chitobiose from the non-reducing ends of chitin chains. It was also observed that this enzyme acts on the fruiting body of <i>Flammulina velutipes</i>, releasing chitobiose as the main product.</p>","PeriodicalId":14999,"journal":{"name":"Journal of applied glycoscience","volume":"72 2","pages":"7202107"},"PeriodicalIF":1.2,"publicationDate":"2025-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12149519/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144274949","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ice formation and growth during freezing in processed foods containing water can deteriorate food quality. Naturally derived antifreeze proteins and antifreeze polysaccharides are an attractive solution to this problem. Alkaline extracts from the basidiomycete Flammulina velutipes (enokitake) are known to inhibit ice crystal growth and are expected to maintain frozen food quality. In this study, polysaccharides/oligosaccharides (POS) were obtained from the readily available edible mushrooms F. velutipes, Hypsizygus marmoreus, Pleurotus eryngii, and Grifola frondosa. POS extracts were isolated by treatment of the fruiting mushroom body with the cell wall-lytic enzyme Uskizyme, then precipitated by ethanol addition. All POS showed antifreeze activity by suppressing ice crystal growth. The benefit of the POS isolated from enzyme-treated edible mushrooms towards frozen processed products quality and shelf-life for foods containing egg protein, fish protein, and rice starch was evaluated. POS derived from F. velutipes was effective in maintaining egg protein (chawanmushi) quality. For fish protein (surimi), the POS derived from F. velutipes and G. frondosa mushrooms suppressed freezing-induced increases in hardness and elasticity. However, for rice starch (shiratama), none of the POS had any effect in preventing retrogradation. This study is the first report to show that components obtained from mushroom cell walls by enzymatic treatment can be effectively used to improve the physical properties of foods. These results suggest the possibility of new applications for mushrooms as potential cryoprotectants in the frozen food industry.
{"title":"Evaluation of Antifreeze Activity of Enzyme-Treated Extract from Mushroom Cell Wall.","authors":"Takemi Kamijo, Yuka Arai, Masahiro Mizuno, Yoshihiko Amano","doi":"10.5458/jag.7202102","DOIUrl":"10.5458/jag.7202102","url":null,"abstract":"<p><p>Ice formation and growth during freezing in processed foods containing water can deteriorate food quality. Naturally derived antifreeze proteins and antifreeze polysaccharides are an attractive solution to this problem. Alkaline extracts from the basidiomycete <i>Flammulina velutipes</i> (enokitake) are known to inhibit ice crystal growth and are expected to maintain frozen food quality. In this study, polysaccharides/oligosaccharides (POS) were obtained from the readily available edible mushrooms <i>F. velutipes</i>, <i>Hypsizygus marmoreus</i>, <i>Pleurotus eryngii</i>, and <i>Grifola frondosa</i>. POS extracts were isolated by treatment of the fruiting mushroom body with the cell wall-lytic enzyme Uskizyme, then precipitated by ethanol addition. All POS showed antifreeze activity by suppressing ice crystal growth. The benefit of the POS isolated from enzyme-treated edible mushrooms towards frozen processed products quality and shelf-life for foods containing egg protein, fish protein, and rice starch was evaluated. POS derived from <i>F. velutipes</i> was effective in maintaining egg protein (chawanmushi) quality. For fish protein (surimi), the POS derived from <i>F. velutipes</i> and <i>G. frondosa</i> mushrooms suppressed freezing-induced increases in hardness and elasticity. However, for rice starch (shiratama), none of the POS had any effect in preventing retrogradation. This study is the first report to show that components obtained from mushroom cell walls by enzymatic treatment can be effectively used to improve the physical properties of foods. These results suggest the possibility of new applications for mushrooms as potential cryoprotectants in the frozen food industry.</p>","PeriodicalId":14999,"journal":{"name":"Journal of applied glycoscience","volume":"72 2","pages":"7202102"},"PeriodicalIF":1.2,"publicationDate":"2025-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12149518/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144274987","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Onions (Allium cepa L.) accumulate fructans, which are fructose polymers, in their bulbs as reserve carbohydrates and as a source of energy for sprouting. Onions with high fructan content and slow fructan degradation by hydrolysis are considered suitable for long-term storage. We have previously found that 'Pole Star' accumulates fewer fructans than 'Kita-momiji 2000' in their bulbs. In this study, we attempted to clarify the differences in storage characteristics, fructan content, and fructan metabolizing enzyme activities between the two cultivars during storage. Sprouting was not observed in the bulbs of 'Kita-momiji 2000' stored at 15 °C for up to 20 weeks, whereas it was observed in 'Pole Star' from around 14 weeks. The fructan content during storage showed a gradual decrease in the inner and outer scales of the bulbs in 'Kita-momiji 2000', whereas a rapid decrease was observed in 'Pole Star'. In the basal plate, the fructan contents in 'Kita-momiji 2000' were higher than those in 'Pole Star' after 16 weeks of storage. Fructan metabolizing enzyme activities were low and constant in 'Kita-momiji 2000', whereas their activities increased in 'Pole Star' during storage. The low fructan content of 'Pole Star' was thought to be due to the high activity of fructan metabolizing enzymes, but the variation of fructan content was difficult to clearly explain using the balance of fructan hydrolase and synthase activities alone.
{"title":"Variation of Fructan and Its Metabolizing Enzymes in Onions with Different Storage Characteristics.","authors":"Keiji Ueno, Satoshi Oku, Hanako Shimura, Taiki Yoshihira, Shuichi Onodera","doi":"10.5458/jag.7202103","DOIUrl":"10.5458/jag.7202103","url":null,"abstract":"<p><p>Onions (<i>Allium cepa</i> L.) accumulate fructans, which are fructose polymers, in their bulbs as reserve carbohydrates and as a source of energy for sprouting. Onions with high fructan content and slow fructan degradation by hydrolysis are considered suitable for long-term storage. We have previously found that 'Pole Star' accumulates fewer fructans than 'Kita-momiji 2000' in their bulbs. In this study, we attempted to clarify the differences in storage characteristics, fructan content, and fructan metabolizing enzyme activities between the two cultivars during storage. Sprouting was not observed in the bulbs of 'Kita-momiji 2000' stored at 15 °C for up to 20 weeks, whereas it was observed in 'Pole Star' from around 14 weeks. The fructan content during storage showed a gradual decrease in the inner and outer scales of the bulbs in 'Kita-momiji 2000', whereas a rapid decrease was observed in 'Pole Star'. In the basal plate, the fructan contents in 'Kita-momiji 2000' were higher than those in 'Pole Star' after 16 weeks of storage. Fructan metabolizing enzyme activities were low and constant in 'Kita-momiji 2000', whereas their activities increased in 'Pole Star' during storage. The low fructan content of 'Pole Star' was thought to be due to the high activity of fructan metabolizing enzymes, but the variation of fructan content was difficult to clearly explain using the balance of fructan hydrolase and synthase activities alone.</p>","PeriodicalId":14999,"journal":{"name":"Journal of applied glycoscience","volume":"72 2","pages":"7202103"},"PeriodicalIF":1.2,"publicationDate":"2025-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12149520/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144274991","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-05-20eCollection Date: 2025-01-01DOI: 10.5458/jag.7202108
Yuki Yashima, Kota Takeda, Naoki Sunagawa, Taku Uchiyama, Kiyohiko Igarashi
Enzymes and cofactors interactions play a significant role in enzymatic function. Particularly, the covalent bonds between proteins and flavin cofactors are important for enzymatic activity and redox potential in covalent flavoproteins. For example, in pyranose 2-oxidase from the basidiomycete Phanerochaete chrysosporium (PcPOx), the flavin adenine dinucleotide (FAD) cofactor forms a covalent bond with histidine (His158), while FAD in other flavoproteins can form a covalent bond with other amino acid residues, such as cysteine, tyrosine, and aspartic acid. Considering the mechanism of forming a covalent bond with FAD, new covalent FAD patterns in PcPOx were expected. Here, we explored the potential for amino acids other than histidine to covalently bind FAD in PcPOx by conducting comprehensive site-directed mutagenesis at His158, and evaluated 19 mutants for covalent-bond-forming ability with FAD, as well as for oxidase and dehydrogenase activities towards D-glucose. All the mutants failed to form a covalent bond with FAD, though they could bind FAD noncovalently to various extents, except for H158D and H158P, which lost not only the covalent bonds with FAD but also the whole of FAD cofactors. The His158 variants showed markedly reduced both the oxidase and dehydrogenase activity toward D-glucose compared with the wild-type enzyme. Moreover, the apo-enzymes H158D and H158P were inactive. Our findings are expected to be helpful in the design of artificial cofactors for flavoproteins.
{"title":"Comprehensive Analysis of Histidine158 Variants Reveals Histidine Is Essential for Covalent Flavin Attachment in Pyranose 2-Oxidase.","authors":"Yuki Yashima, Kota Takeda, Naoki Sunagawa, Taku Uchiyama, Kiyohiko Igarashi","doi":"10.5458/jag.7202108","DOIUrl":"10.5458/jag.7202108","url":null,"abstract":"<p><p>Enzymes and cofactors interactions play a significant role in enzymatic function. Particularly, the covalent bonds between proteins and flavin cofactors are important for enzymatic activity and redox potential in covalent flavoproteins. For example, in pyranose 2-oxidase from the basidiomycete <i>Phanerochaete chrysosporium</i> (<i>Pc</i>POx), the flavin adenine dinucleotide (FAD) cofactor forms a covalent bond with histidine (His158), while FAD in other flavoproteins can form a covalent bond with other amino acid residues, such as cysteine, tyrosine, and aspartic acid. Considering the mechanism of forming a covalent bond with FAD, new covalent FAD patterns in <i>Pc</i>POx were expected. Here, we explored the potential for amino acids other than histidine to covalently bind FAD in <i>Pc</i>POx by conducting comprehensive site-directed mutagenesis at His158, and evaluated 19 mutants for covalent-bond-forming ability with FAD, as well as for oxidase and dehydrogenase activities towards D-glucose. All the mutants failed to form a covalent bond with FAD, though they could bind FAD noncovalently to various extents, except for H158D and H158P, which lost not only the covalent bonds with FAD but also the whole of FAD cofactors. The His158 variants showed markedly reduced both the oxidase and dehydrogenase activity toward D-glucose compared with the wild-type enzyme. Moreover, the apo-enzymes H158D and H158P were inactive. Our findings are expected to be helpful in the design of artificial cofactors for flavoproteins.</p>","PeriodicalId":14999,"journal":{"name":"Journal of applied glycoscience","volume":"72 2","pages":"7202108"},"PeriodicalIF":1.2,"publicationDate":"2025-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12149734/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144274950","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-05-20eCollection Date: 2025-01-01DOI: 10.5458/jag.7202201
Takenobu Ogawa, Kohshi Kikuchi, Shuji Adachi
The changes in moisture content over time were measured for commercially available dried spaghetti with five different diameters (1.17 mm to 1.90 mm) during the rehydration process at 30 °C to 80 °C. The change in moisture content over time at any temperature was modeled using a hyperbolic equation for all spaghetti diameters. The activation energy for the initial rehydration process did not depend on the diameter. The temperature dependence of the equilibrium moisture content differed at temperatures higher and lower than approximately 55 °C, which is close to the starch gelatinization temperature. The rehydration process of spaghetti with diameters of 1.17 mm and 1.42 mm differed from that of thicker spaghetti, with thinner spaghetti rehydrating faster at any temperature. A stochastic model was proposed to explain this phenomenon.
{"title":"Rehydration Kinetics of Dried Spaghetti with Different Diameters.","authors":"Takenobu Ogawa, Kohshi Kikuchi, Shuji Adachi","doi":"10.5458/jag.7202201","DOIUrl":"10.5458/jag.7202201","url":null,"abstract":"<p><p>The changes in moisture content over time were measured for commercially available dried spaghetti with five different diameters (1.17 mm to 1.90 mm) during the rehydration process at 30 °C to 80 °C. The change in moisture content over time at any temperature was modeled using a hyperbolic equation for all spaghetti diameters. The activation energy for the initial rehydration process did not depend on the diameter. The temperature dependence of the equilibrium moisture content differed at temperatures higher and lower than approximately 55 °C, which is close to the starch gelatinization temperature. The rehydration process of spaghetti with diameters of 1.17 mm and 1.42 mm differed from that of thicker spaghetti, with thinner spaghetti rehydrating faster at any temperature. A stochastic model was proposed to explain this phenomenon.</p>","PeriodicalId":14999,"journal":{"name":"Journal of applied glycoscience","volume":"72 2","pages":"7202201"},"PeriodicalIF":1.2,"publicationDate":"2025-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12149735/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144274990","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-05-20eCollection Date: 2025-01-01DOI: 10.5458/jag.7202203
Masakazu Ike, Kenji Yamagishi, Ken Tokuyasu
Here, we aimed to construct a biological saccharification process that combines the steps of enzyme production and enzymatic saccharification using an aerobic fungus Trichoderma reesei, an excellent cellulase producer. Sugar production consists of the growth phase at 28 °C and the saccharification phase at 50 °C. Final sugar yields from alkali-treated rice straw and microcrystalline cellulose using the T. reesei M2-1 strain were greatly affected by mycelial inoculum size and growth phase periods. The optimization of these factors yielded 74.5 % and 60.6 % of sugar from the alkali-treated rice straw and microcrystalline cellulose, respectively, at 120 h of the biological saccharification process. In comparison with the process employing anaerobic microorganisms, a relatively higher yield of sugars was achieved within a shorter period and the use of non-GM fungal strain. However, large variability in sugar yields based on feedstocks suggests imperceptible differences in initial conditions.
{"title":"Construction of the Biological Saccharification Process from Lignocellulosic Biomass Using a Filamentous Fungus <i>Trichoderma reesei</i>.","authors":"Masakazu Ike, Kenji Yamagishi, Ken Tokuyasu","doi":"10.5458/jag.7202203","DOIUrl":"10.5458/jag.7202203","url":null,"abstract":"<p><p>Here, we aimed to construct a biological saccharification process that combines the steps of enzyme production and enzymatic saccharification using an aerobic fungus <i>Trichoderma reesei</i>, an excellent cellulase producer. Sugar production consists of the growth phase at 28 °C and the saccharification phase at 50 °C. Final sugar yields from alkali-treated rice straw and microcrystalline cellulose using the <i>T. reesei</i> M2-1 strain were greatly affected by mycelial inoculum size and growth phase periods. The optimization of these factors yielded 74.5 % and 60.6 % of sugar from the alkali-treated rice straw and microcrystalline cellulose, respectively, at 120 h of the biological saccharification process. In comparison with the process employing anaerobic microorganisms, a relatively higher yield of sugars was achieved within a shorter period and the use of non-GM fungal strain. However, large variability in sugar yields based on feedstocks suggests imperceptible differences in initial conditions.</p>","PeriodicalId":14999,"journal":{"name":"Journal of applied glycoscience","volume":"72 2","pages":"7202203"},"PeriodicalIF":1.2,"publicationDate":"2025-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12149730/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144274951","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Cyanobacteria generally accumulate glycogen in their cells as a photosynthetic product. Interestingly, several unicellular diazotrophic species accumulate insoluble branched polysaccharide called cyanobacterial starch. Branching enzymes (BEs) belonging to glycoside hydrolase family 13 are universally found in the phylum cyanobacteria and are key enzymes in determining the branching pattern of polysaccharides. Many of the glycogen-producing cyanobacteria possess a single BE isozyme (BE1), while multiple BE isozymes (BE1, BE2, and BE3) are present in cyanobacterial starch-producing strains. A previous study suggested that the coexistence of three BE isozymes is essential for the trait of cyanobacterial starch-production. In this study, to obtain clues regarding the significance of the coexistence of the multiple isozymes, biochemical characterization using 11 purified recombinant BEs from both glycogen- and cyanobacterial starch-producing strains was performed. The BE1 and BE2 isozymes produced glucan chains with degree of polymerization (DP) 6 and 7 specifically, while BE3 isozymes produced short (DP 5-12) and long chains (DP 30-40) slightly. The BE1 and BE2 isozymes showed high activity, but those of BE3 isozymes were significantly low. The BE1 isozyme from cyanobacterial starch-producing Cyanobacterium sp. CLg1 showed markedly low activity. The BE1 and BE2 isozymes form cyanobacterial starch-producing Rippkaea orientalis PCC 8802 lacking BE3 isozyme shared similar reaction product specificity. These results suggested that the presence of the three isozymes is not essential and the roles of BE isozymes may vary depending on cyanobacterial species. These findings should deepen our understanding of the significance of BE isozymes in the biosynthesis of cyanobacterial starch.
蓝藻通常在其细胞中作为光合产物积累糖原。有趣的是,一些单细胞重氮营养物种积累了不溶性的支链多糖,称为蓝藻淀粉。分支酶(BEs)属于糖苷水解酶家族13,普遍存在于蓝藻门中,是决定多糖分支模式的关键酶。许多产糖原的蓝藻具有单一的BE同工酶(BE1),而在产淀粉的蓝藻菌株中存在多个BE同工酶(BE1, BE2和BE3)。先前的一项研究表明,三种BE同工酶的共存对蓝藻淀粉生产的特性至关重要。在本研究中,为了获得多同工酶共存意义的线索,利用从糖原和蓝藻产淀粉菌株纯化的11个重组BEs进行了生化表征。BE1和BE2同工酶产生的葡聚糖链聚合度为6和7,BE3同工酶产生的葡聚糖链聚合度为5-12,长链聚合度为30-40。BE1和BE2同工酶活性较高,BE3同工酶活性极低。产淀粉蓝藻CLg1的BE1同工酶活性明显较低。缺乏BE3同工酶的产淀粉蓝藻Rippkaea orientalis PCC 8802的BE1和BE2同工酶具有相似的反应产物特异性。这些结果表明,这三种同工酶的存在并不是必需的,BE同工酶的作用可能因蓝藻种类而异。这些发现应该加深我们对BE同工酶在蓝藻淀粉生物合成中的意义的理解。
{"title":"Orthologs of Branching Enzymes from Cyanobacteria Accumulating Distinct Types of α-Glucans Share Common Reaction Product Specificity.","authors":"Miho Kuroki, Yuuki Matsuura, Eiji Suzuki, Ryuichiro Suzuki","doi":"10.5458/jag.7202105","DOIUrl":"10.5458/jag.7202105","url":null,"abstract":"<p><p>Cyanobacteria generally accumulate glycogen in their cells as a photosynthetic product. Interestingly, several unicellular diazotrophic species accumulate insoluble branched polysaccharide called cyanobacterial starch. Branching enzymes (BEs) belonging to glycoside hydrolase family 13 are universally found in the phylum cyanobacteria and are key enzymes in determining the branching pattern of polysaccharides. Many of the glycogen-producing cyanobacteria possess a single BE isozyme (BE1), while multiple BE isozymes (BE1, BE2, and BE3) are present in cyanobacterial starch-producing strains. A previous study suggested that the coexistence of three BE isozymes is essential for the trait of cyanobacterial starch-production. In this study, to obtain clues regarding the significance of the coexistence of the multiple isozymes, biochemical characterization using 11 purified recombinant BEs from both glycogen- and cyanobacterial starch-producing strains was performed. The BE1 and BE2 isozymes produced glucan chains with degree of polymerization (DP) 6 and 7 specifically, while BE3 isozymes produced short (DP 5-12) and long chains (DP 30-40) slightly. The BE1 and BE2 isozymes showed high activity, but those of BE3 isozymes were significantly low. The BE1 isozyme from cyanobacterial starch-producing <i>Cyanobacterium</i> sp. CLg1 showed markedly low activity. The BE1 and BE2 isozymes form cyanobacterial starch-producing <i>Rippkaea orientalis</i> PCC 8802 lacking BE3 isozyme shared similar reaction product specificity. These results suggested that the presence of the three isozymes is not essential and the roles of BE isozymes may vary depending on cyanobacterial species. These findings should deepen our understanding of the significance of BE isozymes in the biosynthesis of cyanobacterial starch.</p>","PeriodicalId":14999,"journal":{"name":"Journal of applied glycoscience","volume":"72 2","pages":"7202105"},"PeriodicalIF":1.2,"publicationDate":"2025-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12149516/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144274989","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-05-20eCollection Date: 2025-01-01DOI: 10.5458/jag.7202101
Noriki Fujio, Shinya Fushinobu, Chihaya Yamada
Lacto-N-biosidase hydrolyzes the β-GlcNAc or β-GalNAc bond of sugar chains to release lacto-N-biose I (Gal-β1,3-GlcNAc) or galacto-N-biose (Gal-β1,3-GalNAc) from the non-reducing end. Typical substrates for lacto-N-biosidase include type I oligosaccharides contained in human breast milk, such as lacto-N-tetraose. Lacto-N-biosidases have recently received significant attention because of their potential to synthesize milk oligosaccharides. Bifidobacterial lacto-N-biosidases belonging to glycoside hydrolase families 20 and 136 have been studied. The GH20 lacto-N-biosidases utilize a substrate-associated hydrolysis mechanism. LnbB from Bifidobacterium bifidum is the only lacto-N-biosidase with reported crystal structures in GH20. In this study, the crystal structure of the lacto-N-biosidase from Streptomyces sp. strain 142 (StrLNBase) was solved in a complex with lacto-N-biose and galacto-N-biose. The stabilizing residue, which recognizes the nitrogen atom of the N-acetyl group of the -1 subsite, and the catalytic acid/base residue, were determined to be D304 and E305, respectively. The structure of StrLNBase is similar to that of LnbB; however, in the complex with galacto-N-biose, there were two structures exhibiting different sugar conformations. A phylogenetic analysis revealed that lacto-N-biosidases discovered in the soil bacteria Streptomyces spp. and human gut bacteria Bifidobacterium spp. may be divided into two separate groups, which suggests that they evolved divergently.
乳- n-生物苷酶水解糖链上的β-GlcNAc或β-GalNAc键,从非还原端释放乳- n-二糖I (Gal-β1,3- glcnac)或乳- n-二糖(Gal-β1,3- galnac)。乳- n -生物苷酶的典型底物包括人类母乳中含有的I型低聚糖,如乳- n -四糖。乳n -生物糖苷酶由于具有合成乳低聚糖的潜力,近年来受到了广泛的关注。双歧杆菌乳酸- n生物苷酶属于糖苷水解酶家族20和136。GH20乳酸- n -生物苷酶利用底物相关水解机制。来自两歧双歧杆菌的LnbB是GH20中报道的唯一具有晶体结构的乳酸- n -生物苷酶。本研究用乳酸- n -二糖和半乳糖- n -二糖配合物解析了链霉菌菌株142 (StrLNBase)的乳酸- n -生物苷酶的晶体结构。识别-1亚位n -乙酰基氮原子的稳定残基和催化酸/碱残基分别为D304和E305。StrLNBase的结构与LnbB相似;然而,在与半乳糖- n -二糖的配合物中,有两种结构表现出不同的糖构象。系统发育分析表明,土壤细菌链霉菌和人类肠道细菌双歧杆菌中发现的乳酸- n -生物苷酶可能分为两个不同的类群,这表明它们的进化是不同的。
{"title":"Crystal Structure of Glycoside Hydrolase Family 20 Lacto-<i>N</i>-biosidase from Soil Bacterium <i>Streptomyces</i> sp. Strain 142.","authors":"Noriki Fujio, Shinya Fushinobu, Chihaya Yamada","doi":"10.5458/jag.7202101","DOIUrl":"10.5458/jag.7202101","url":null,"abstract":"<p><p>Lacto-<i>N</i>-biosidase hydrolyzes the β-GlcNAc or β-GalNAc bond of sugar chains to release lacto-<i>N</i>-biose I (Gal-β1,3-GlcNAc) or galacto-<i>N</i>-biose (Gal-β1,3-GalNAc) from the non-reducing end. Typical substrates for lacto-<i>N</i>-biosidase include type I oligosaccharides contained in human breast milk, such as lacto-<i>N</i>-tetraose. Lacto-<i>N</i>-biosidases have recently received significant attention because of their potential to synthesize milk oligosaccharides. Bifidobacterial lacto-<i>N</i>-biosidases belonging to glycoside hydrolase families 20 and 136 have been studied. The GH20 lacto-<i>N</i>-biosidases utilize a substrate-associated hydrolysis mechanism. LnbB from <i>Bifidobacterium bifidum</i> is the only lacto-<i>N</i>-biosidase with reported crystal structures in GH20. In this study, the crystal structure of the lacto-<i>N</i>-biosidase from <i>Streptomyces</i> sp. strain 142 (<i>Str</i>LNBase) was solved in a complex with lacto-<i>N</i>-biose and galacto-<i>N</i>-biose. The stabilizing residue, which recognizes the nitrogen atom of the <i>N</i>-acetyl group of the -1 subsite, and the catalytic acid/base residue, were determined to be D304 and E305, respectively. The structure of <i>Str</i>LNBase is similar to that of LnbB; however, in the complex with galacto-<i>N</i>-biose, there were two structures exhibiting different sugar conformations. A phylogenetic analysis revealed that lacto-<i>N</i>-biosidases discovered in the soil bacteria <i>Streptomyces</i> spp. and human gut bacteria <i>Bifidobacterium</i> spp. may be divided into two separate groups, which suggests that they evolved divergently.</p>","PeriodicalId":14999,"journal":{"name":"Journal of applied glycoscience","volume":"72 2","pages":"7202101"},"PeriodicalIF":1.2,"publicationDate":"2025-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12149517/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144274953","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Western honeybee (Apis mellifera) α-glucosidase III (HBG-III), which is secreted from the hypopharyngeal glands of honeybees, plays a role in converting nectar into honey. Consequently, hypothesizing that HBG-III is a suitable marker of honey authenticity, we developed an analytical method to determine the HBG-III content and investigated its applicability to various commercial products. Following extraction from honey using phosphate-buffered saline, HBG-III was concentrated using an ultrafiltration membrane and subsequently fragmented with trypsin and lysyl endopeptidase mixture. The specific peptide fragments were used for quantitation by liquid chromatography-tandem mass spectrometry. The established method was validated for linearity, accuracy, precision, and the limit of quantitation (LOQ). As a result, the calibration curve was linear in the range of 0.01-0.3 μM, the mean recovery ranged from 73.8 to 89.2 %, the within-laboratory reproducibility (RSDwr) ranged from 3.9 to 6.5 %, and the LOQ was 1.9 mg/kg. An investigation of HBG-III concentrations in 65 honey products available on the Japanese market revealed that the HBG-III content of 15 low-priced honey products was below the LOQ. This suggested that these products may be adulterated with non-honey syrups. Therefore, this method can serve as an effective tool to verify the authenticity of honey products.
{"title":"Development of an LC-MS/MS Method for Quantitation of Western Honeybee (<i>Apis mellifera</i>) α-Glucosidase III as a Potential Honey Authenticity Marker.","authors":"Yushi Takahashi, Izumi Yoshida, Toshiaki Yokozeki, Yoshinari Hirakawa, Kazuhiro Fujita","doi":"10.5458/jag.7202106","DOIUrl":"10.5458/jag.7202106","url":null,"abstract":"<p><p>Western honeybee (<i>Apis mellifera</i>) α-glucosidase III (HBG-III), which is secreted from the hypopharyngeal glands of honeybees, plays a role in converting nectar into honey. Consequently, hypothesizing that HBG-III is a suitable marker of honey authenticity, we developed an analytical method to determine the HBG-III content and investigated its applicability to various commercial products. Following extraction from honey using phosphate-buffered saline, HBG-III was concentrated using an ultrafiltration membrane and subsequently fragmented with trypsin and lysyl endopeptidase mixture. The specific peptide fragments were used for quantitation by liquid chromatography-tandem mass spectrometry. The established method was validated for linearity, accuracy, precision, and the limit of quantitation (LOQ). As a result, the calibration curve was linear in the range of 0.01-0.3 μM, the mean recovery ranged from 73.8 to 89.2 %, the within-laboratory reproducibility (RSD<sub>wr</sub>) ranged from 3.9 to 6.5 %, and the LOQ was 1.9 mg/kg. An investigation of HBG-III concentrations in 65 honey products available on the Japanese market revealed that the HBG-III content of 15 low-priced honey products was below the LOQ. This suggested that these products may be adulterated with non-honey syrups. Therefore, this method can serve as an effective tool to verify the authenticity of honey products.</p>","PeriodicalId":14999,"journal":{"name":"Journal of applied glycoscience","volume":"72 2","pages":"7202106"},"PeriodicalIF":1.2,"publicationDate":"2025-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12149521/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144274954","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}