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Microscopic observation of the effects of elongation on the polymer chain dynamics of crosslinked polybutadiene using quasi-elastic γ-ray scattering. 利用准弹性 γ 射线散射对交联聚丁二烯的伸长对聚合物链动力学的影响进行微观观察。
IF 2.4 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-09-01 Epub Date: 2022-08-23 DOI: 10.1107/S1600577522007998
Ryo Mashita, Makina Saito, Yoshitaka Yoda, Hiroyuki Kishimoto, Makoto Seto, Toshiji Kanaya

A synchrotron-radiation-based quasi-elastic γ-ray scattering system has been developed that uses time-domain interferometry to observe microscopic polymer dynamics under uniaxial deformation. The stress-producing mechanism of crosslinked polybutadiene has been studied from a microscopic viewpoint. It was found that the mean relaxation time ⟨τ⟩ of the microscopic polymer motion observed over a relatively high temperature (T) range (i.e. T-1 < 0.0045 K-1) increased with elongation on both the intra- and intermolecular scales. Following an extensive strain dependence study, it was found that the strain dependences of both the intra- and intermolecular ⟨τ⟩ changed with the stress dependence. It was therefore suggested that ⟨τ⟩ increased due to the constraint of the local polymer chain motion caused by elongation. The local molecular dynamics of polymer chains under uniaxial deformation could be evaluated at intra- and intermolecular scales separately for the first time using our method.

我们开发了一种基于同步辐射的准弹性 γ 射线散射系统,该系统利用时域干涉测量法观测单轴变形下聚合物的微观动态。从微观角度研究了交联聚丁二烯的应力产生机制。研究发现,在相对较高的温度(T)范围内(即 T-1 < 0.0045 K-1)观察到的微观聚合物运动的平均弛豫时间⟨τ⟩随着分子内和分子间尺度的伸长而增加。经过广泛的应变依赖性研究发现,分子内和分子间⟨τ⟩的应变依赖性随应力依赖性而变化。因此,有人认为⟨τ⟩的增加是由于伸长对局部聚合物链运动的限制。利用我们的方法,可以首次在分子内和分子间尺度上分别评估单轴变形下聚合物链的局部分子动力学。
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引用次数: 0
Synchrotron radiation X-ray imaging with large field of view and high resolution using micro-scanning method. 微扫描同步辐射大视场高分辨率x射线成像技术。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-09-01 Epub Date: 2022-08-12 DOI: 10.1107/S1600577522007652
Rui Sun, Yanping Wang, Jie Zhang, Tijian Deng, Qiru Yi, Bei Yu, Mei Huang, Gang Li, Xiaoming Jiang

In synchrotron radiation X-ray imaging, the imaging field of view and spatial resolution are mutually restricted, which makes it impossible to have both a large field of view and high resolution when carrying out experiments. Constructing an oversampled image through the micro-scanning method and using the deconvolution algorithm to eliminate the point spread function introduced by pixel overlap can increase the resolution under a fixed imaging field of view, thereby improving the ratio of the field of view to the spatial resolution. In this paper, numerical simulation and synchrotron radiation experiments are carried out with a different number of micro-scanning steps. In numerical simulation experiments only affected by the image pixel size, as the number of micro-scanning steps increases, the ability of the oversampled image with deconvolution to improve the resolution is stronger. The achievable resolution of the oversampled image with deconvolution is basically the same as that of the sample image. In the synchrotron radiation experiments, the resolution of the oversampled image with deconvolution in the 2 × 2 mode is significantly improved. However, as the number of micro-scanning steps increases, the resolution improvement is limited, or even no longer improved. Finally, by analyzing the results of numerical simulation and synchrotron radiation experiments, three factors (four other factors affecting the resolution besides the camera resolution, translational accuracy of micro-scanning, and the signal-to-noise ratio of projections) affecting the micro-scanning method are proposed and verified by experiments.

在同步辐射x射线成像中,成像视场和空间分辨率是相互制约的,这使得在进行实验时不可能同时拥有大视场和高分辨率。通过微扫描方法构造过采样图像,利用反卷积算法消除像素重叠引入的点扩散函数,可以提高固定成像视场下的分辨率,从而提高视场与空间分辨率的比值。本文采用不同的微扫描步数进行了数值模拟和同步辐射实验。在仅受图像像素大小影响的数值模拟实验中,随着微扫描步数的增加,过采样图像反卷积提高分辨率的能力更强。反卷积过采样图像的可实现分辨率与样本图像基本相同。在同步辐射实验中,对2 × 2模式下的过采样图像进行反卷积处理后,分辨率得到了显著提高。然而,随着微扫描步数的增加,分辨率的提高是有限的,甚至不再提高。最后,通过对数值模拟和同步辐射实验结果的分析,提出了影响微扫描方法的3个因素(除相机分辨率、微扫描平动精度和投影信噪比外的4个影响分辨率的因素),并通过实验进行了验证。
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引用次数: 1
Double-multilayer monochromators for high-energy and large-field X-ray imaging applications with intense pink beams at SPring-8 BL20B2. 双多层单色仪用于高能和大视场x射线成像应用,具有强烈的粉红色光束在SPring-8 BL20B2。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-09-01 Epub Date: 2022-07-15 DOI: 10.1107/S1600577522006610
Takahisa Koyama, Yasunori Senba, Hiroshi Yamazaki, Tomoyuki Takeuchi, Masayuki Tanaka, Yasuhiro Shimizu, Koji Tsubota, Yasuhisa Matsuzaki, Hikaru Kishimoto, Takanori Miura, Satsuki Shimizu, Takamitsu Saito, Hirokatsu Yumoto, Kentaro Uesugi, Masato Hoshino, Jumpei Yamada, Taito Osaka, Michihiro Sugahara, Nobuteru Nariyama, Yasuhide Ishizawa, Hiroko Nakano, Choji Saji, Kyo Nakajima, Koji Motomura, Yasumasa Joti, Makina Yabashi, Haruhiko Ohashi

In this study, double-multilayer monochromators that generate intense, high-energy, pink X-ray beams are designed, installed and evaluated at the SPring-8 medium-length (215 m) bending-magnet beamline BL20B2 for imaging applications. Two pairs of W/B4C multilayer mirrors are designed to utilize photon energies of 110 keV and 40 keV with bandwidths of 0.8% and 4.8%, respectively, which are more than 100 times larger when compared with the Si double-crystal monochromator (DCM) with a bandwidth of less than 0.01%. At an experimental hutch located 210 m away from the source, a large and uniform beam of size 14 mm (V) × 300 mm (H) [21 mm (V) × 300 mm (H)] was generated with a high flux density of 1.6 × 109 photons s-1 mm-2 (6.9 × 1010 photons s-1 mm-2) at 110 keV (40 keV), which marked a 300 (190) times increase in the photon flux when compared with a DCM with Si 511 (111) diffraction. The intense pink beams facilitate advanced X-ray imaging for large-sized objects such as fossils, rocks, organs and electronic devices with high speed and high spatial resolution.

在这项研究中,设计、安装并评估了用于成像应用的弹簧-8中长(215米)弯曲磁铁光束线BL20B2上产生强烈、高能粉红色x射线光束的双层单色仪。设计了两对W/B4C多层反射镜,其光子能量分别为110 keV和40 keV,带宽分别为0.8%和4.8%,比带宽小于0.01%的Si双晶单色器(DCM)大100倍以上。在距离光源210 m的实验室内,以110 keV (40 keV)的高通量密度(1.6 × 109光子s-1 mm-2 (6.9 × 1010光子s-1 mm-2)产生了尺寸为14 mm (V) × 300 mm (H) [21 mm (V) × 300 mm (H)]的大均匀光束,与具有Si 511(111)衍射的DCM相比,光子通量增加了300(190)倍。强烈的粉红色光束有助于对化石,岩石,器官和电子设备等大型物体进行高速和高空间分辨率的先进x射线成像。
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引用次数: 0
Foreword to the special virtual issue on Actinide physics and chemistry with synchrotron radiation. 《同步辐射锕系元素物理与化学》虚拟特刊前言。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-09-01 Epub Date: 2022-08-10 DOI: 10.1107/S1600577522007019
Kristina O Kvashnina, Sergei M Butorin, Shuao Wang, Weiqun Shi
Foreword to the virtual special issue of Journal of Synchrotron Radiation on Actinide Physics and Chemistry with Synchrotron Radiation.
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引用次数: 0
New data analysis for BioSAXS at the ESRF. ESRF 的 BioSAXS 新数据分析。
IF 2.4 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-09-01 Epub Date: 2022-08-23 DOI: 10.1107/S1600577522007238
Jérôme Kieffer, Martha Brennich, Jean Baptiste Florial, Marcus Oscarsson, Alejandro De Maria Antolinos, Mark Tully, Petra Pernot

The second phase of the ESRF upgrade program did not only provide a new storage ring (Extremely Brilliant Source, EBS) but also allowed several beamlines to be refurbished. The BioSAXS beamline (located on port BM29) was upgraded with a new wiggler source and a larger detector. All analysis software has been rewritten to cope with the increased data flux and continues to provide beamline users with reduced and pre-processed data in real time. This article describes FreeSAS, an open-source collection of various small-angle scattering analysis algorithms needed to reduce and analyze BioSAXS data, and Dahu, the tool used to interface data analysis with beamline control. It further presents the data-processing pipelines for the different data acquisitions modes of the beamline, using either a sample changer for individual homogeneous samples or an inline size-exclusion chromatography setup.

ESRF 升级计划的第二阶段不仅提供了一个新的存储环(极亮源,EBS),还对几条光束线进行了翻新。BioSAXS 光束线(位于 BM29 端口)进行了升级,配备了一个新的摇摆源和一个更大的探测器。所有分析软件都已重写,以应对增加的数据通量,并继续实时为光束线用户提供经过缩减和预处理的数据。本文介绍了FreeSAS和Dahu(用于将数据分析与光束线控制连接起来的工具),FreeSAS是各种小角散射分析算法的开源集合,可用于还原和分析BioSAXS数据。它进一步介绍了光束线不同数据采集模式的数据处理管道,这些模式可以使用样品更换器采集单个均质样品,也可以使用在线尺寸排阻色谱设置。
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引用次数: 0
Environmental control for X-ray nanotomography. X 射线纳米层析技术的环境控制。
IF 2.4 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-09-01 Epub Date: 2022-07-21 DOI: 10.1107/S1600577522006968
Mirko Holler, Tomas Aidukas, Lars Heller, Christian Appel, Nicholas W Phillips, Elisabeth Müller-Gubler, Manuel Guizar-Sicairos, Jörg Raabe, Johannes Ihli

The acquisition speed and spatial resolution of X-ray nanotomography have continuously improved over the last decades. Coherent diffraction-based techniques breach the 10 nm resolution barrier frequently and thus pose stringent demands on sample positioning accuracy and stability. At the same time there is an increasing desire to accommodate in situ or operando measurements. Here, an environmental control system for X-ray nanotomography is introduced to regulate the temperature of a sample from room temperature up to 850°C in a controlled atmospheric composition. The system allows for a 360° sample rotation, permitting tomographic studies in situ or operando free of missing wedge constraints. The system is implemented and available at the flOMNI microscope at the Swiss Light Source. In addition to the environmental control system itself, the related modifications of flOMNI are described. Tomographic measurements of a nanoporous gold sample at 50°C and 600°C at a resolution of sub-20 nm demonstrate the performance of the device.

过去几十年来,X 射线纳米层析技术的采集速度和空间分辨率不断提高。基于相干衍射的技术经常突破 10 纳米分辨率的障碍,因此对样品定位的准确性和稳定性提出了严格的要求。与此同时,人们对原位或操作测量的要求也越来越高。这里介绍一种用于 X 射线纳米层析成像的环境控制系统,可在可控的大气成分中将样品的温度从室温调节到 850°C。该系统允许样品 360° 旋转,从而使断层扫描研究不受楔形缺失的限制。该系统已在瑞士光源的 flOMNI 显微镜上实施并投入使用。除了环境控制系统本身,还介绍了对 flOMNI 进行的相关改造。在50°C和600°C条件下,以低于20纳米的分辨率对纳米多孔金样品进行的断层扫描测量证明了该设备的性能。
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引用次数: 0
Observation of water droplets in microporous layers for polymer electrolyte fuel cells by X-ray computed nano-tomography. 聚合物电解质燃料电池微孔层中水滴的x射线计算机纳米层析成像观察。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-09-01 Epub Date: 2022-08-17 DOI: 10.1107/S1600577522007949
Satoshi Yamaguchi, Satoru Kato, Wataru Yoshimune, Daigo Setoyama, Akihiko Kato, Yasutaka Nagai, Takahisa Suzuki, Akihisa Takeuchi, Kentaro Uesugi

An X-ray computed nano-tomography (nano-CT) system has been established at the BL33XU beamline of SPring-8. The optical system consists of pseudo-Köhler illumination with a sector condenser zone plate, an apodization Fresnel zone plate as the objective lens, and a Zernike phase plate. The imaging detector is a fiber-coupling type X-ray camera. The performance of the X-ray nano-CT system was confirmed by imaging an X-ray test chart. The system was subsequently applied to the observation of a microporous layer for polymer electrolyte fuel cells and a simulated microporous layer including liquid water. The nano-CT system, which can perform a computed tomography measurement in less than 4 min, allowed visualization of a spherical water droplet produced in the microporous layer. In the present study, the shape of water droplets in a nanoscale porous structure is investigated.

在SPring-8的BL33XU光束线上建立了一个x射线计算机纳米断层扫描系统。该光学系统由pseudo-Köhler照明组成,采用扇形聚光镜带片、远视菲涅耳带片作为物镜和泽尼克相片。成像探测器为光纤耦合型x射线照相机。x射线纳米ct系统的性能通过x射线测试图的成像得到了证实。该系统随后被应用于观察聚合物电解质燃料电池的微孔层和包括液态水的模拟微孔层。纳米ct系统可以在不到4分钟的时间内完成计算机断层扫描测量,可以可视化微孔层中产生的球形水滴。在本研究中,研究了纳米尺度多孔结构中水滴的形状。
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引用次数: 0
Fixed-target serial crystallography at the Structural Biology Center. 结构生物学中心的固定目标序列晶体学。
IF 2.4 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-09-01 Epub Date: 2022-08-17 DOI: 10.1107/S1600577522007895
Darren A Sherrell, Alex Lavens, Mateusz Wilamowski, Youngchang Kim, Ryan Chard, Krzysztof Lazarski, Gerold Rosenbaum, Rafael Vescovi, Jessica L Johnson, Chase Akins, Changsoo Chang, Karolina Michalska, Gyorgy Babnigg, Ian Foster, Andrzej Joachimiak

Serial synchrotron crystallography enables the study of protein structures under physiological temperature and reduced radiation damage by collection of data from thousands of crystals. The Structural Biology Center at Sector 19 of the Advanced Photon Source has implemented a fixed-target approach with a new 3D-printed mesh-holder optimized for sample handling. The holder immobilizes a crystal suspension or droplet emulsion on a nylon mesh, trapping and sealing a near-monolayer of crystals in its mother liquor between two thin Mylar films. Data can be rapidly collected in scan mode and analyzed in near real-time using piezoelectric linear stages assembled in an XYZ arrangement, controlled with a graphical user interface and analyzed using a high-performance computing pipeline. Here, the system was applied to two β-lactamases: a class D serine β-lactamase from Chitinophaga pinensis DSM 2588 and L1 metallo-β-lactamase from Stenotrophomonas maltophilia K279a.

串行同步加速器晶体学能够在生理温度下研究蛋白质结构,并通过收集成千上万晶体的数据来减少辐射损伤。位于先进光子源 19 区的结构生物学中心采用了一种固定目标的方法,这种方法使用了一种新的三维打印网状支架,优化了样品处理。该支架将晶体悬浮液或液滴乳液固定在尼龙网上,在两层薄薄的 Mylar 膜之间的母液中捕获并密封近单层晶体。数据可以在扫描模式下快速收集,并通过以 XYZ 排列方式组装的压电线性平台进行近乎实时的分析,这些数据由图形用户界面控制,并通过高性能计算管道进行分析。在这里,该系统被应用于两种 β-内酰胺酶:来自 Chitinophaga pinensis DSM 2588 的 D 类丝氨酸 β-内酰胺酶和来自 Stenotrophomonas maltophilia K279a 的 L1 金属-β-内酰胺酶。
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引用次数: 0
The soft X-ray monochromator at the SASE3 beamline of the European XFEL: from design to operation. 欧洲XFEL SASE3光束线上的软x射线单色仪:从设计到操作。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-09-01 Epub Date: 2022-08-23 DOI: 10.1107/S1600577522007627
N Gerasimova, D La Civita, L Samoylova, M Vannoni, R Villanueva, D Hickin, R Carley, R Gort, B E Van Kuiken, P Miedema, L Le Guyarder, L Mercadier, G Mercurio, J Schlappa, M Teichman, A Yaroslavtsev, H Sinn, A Scherz

The SASE3 soft X-ray beamline at the European XFEL has been designed and built to provide experiments with a pink or monochromatic beam in the photon energy range 250-3000 eV. Here, the focus is monochromatic operation of the SASE3 beamline, and the design and performance of the SASE3 grating monochromator are reported. The unique capability of a free-electron laser source to produce short femtosecond pulses of a high degree of coherence challenges the monochromator design by demanding control of both photon energy and temporal resolution. The aim to transport close to transform-limited pulses poses very high demands on the optics quality, in particular on the grating. The current realization of the SASE3 monochromator is discussed in comparison with optimal design performance. At present, the monochromator operates with two gratings: the low-resolution grating is optimized for time-resolved experiments and allows for moderate resolving power of about 2000-5000 along with pulse stretching of a few to a few tens of femtoseconds RMS, and the high-resolution grating reaches a resolving power of 10 000 at the cost of larger pulse stretching.

欧洲XFEL的SASE3软x射线光束线设计和建造用于提供250-3000 eV光子能量范围内的粉红色或单色光束的实验。本文的重点是SASE3光束线的单色操作,并报道了SASE3光栅单色仪的设计和性能。自由电子激光源产生高度相干的短飞秒脉冲的独特能力,对单色仪的设计提出了挑战,要求控制光子能量和时间分辨率。传输接近变换限制脉冲的目标对光学质量提出了很高的要求,特别是对光栅。讨论了SASE3单色仪的当前实现,并与最佳设计性能进行了比较。目前,单色仪采用两种光栅:低分辨率光栅是为时间分辨实验而优化的,其中等分辨率约为2000-5000,脉冲拉伸的RMS为几到几十飞秒;高分辨率光栅以更大的脉冲拉伸为代价,达到10000的分辨率。
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引用次数: 4
Improved precision in As speciation analysis with HERFD-XANES at the As K-edge: the case of As speciation in mine waste. 在砷K边缘使用HERFD-XANES提高了砷形态分析的精度:以矿山废物中的砷形态为例。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-09-01 Epub Date: 2022-08-11 DOI: 10.1107/S1600577522007068
Emily M Saurette, Y Zou Frinfrock, Brent Verbuyst, David W Blowes, Joyce M McBeth, Carol J Ptacek

High-energy-resolution fluorescence-detected (HERFD) X-ray absorption near-edge spectroscopy (XANES) is a spectroscopic method that allows for increased spectral feature resolution, and greater selectivity to decrease complex matrix effects compared with conventional XANES. XANES is an ideal tool for speciation of elements in solid-phase environmental samples. Accurate speciation of As in mine waste materials is important for understanding the mobility and toxicity of As in near-surface environments. In this study, linear combination fitting (LCF) was performed on synthetic spectra generated from mixtures of eight measured reference compounds for both HERFD-XANES and transmission-detected XANES to evaluate the improvement in quantitative speciation with HERFD-XANES spectra. The reference compounds arsenolite (As2O3), orpiment (As2S3), getchellite (AsSbS3), arsenopyrite (FeAsS), kaňkite (FeAsO4·3.5H2O), scorodite (FeAsO4·2H2O), sodium arsenate (Na3AsO4), and realgar (As4S4) were selected for their importance in mine waste systems. Statistical methods of principal component analysis and target transformation were employed to determine whether HERFD improves identification of the components in a dataset of mixtures of reference compounds. LCF was performed on HERFD- and total fluorescence yield (TFY)-XANES spectra collected from mine waste samples. Arsenopyrite, arsenolite, orpiment, and sodium arsenate were more accurately identified in the synthetic HERFD-XANES spectra compared with the transmission-XANES spectra. In mine waste samples containing arsenopyrite and either scorodite or kaňkite, LCF with HERFD-XANES measurements resulted in fits with smaller R-factors than concurrently collected TFY measurements. The improved accuracy of HERFD-XANES analysis may provide enhanced delineation of As phases controlling biogeochemical reactions in mine wastes, contaminated soils, and remediation systems.

高能分辨率荧光检测(HERFD)X射线吸收近边缘光谱(XANES)是一种光谱方法,与传统的XANES相比,它可以提高光谱特征分辨率,并具有更大的选择性来减少复杂基质效应。XANES是固相环境样品中元素形态形成的理想工具。矿山废料中砷的准确形态对于了解砷在近地表环境中的流动性和毒性非常重要。在本研究中,对HERFD-XANES和透射检测XANES的八种测量参考化合物的混合物产生的合成光谱进行了线性组合拟合(LCF),以评估HERFD-XAN光谱在定量物种形成方面的改进。参考化合物砷铁矿(As2O3)、雌黄(As2S3)、绿柱石(AsSbS3)、毒砂(FeAsS)、钾铁矿(FeAsO4·3.5H2O)、焦黄铁矿(FeAsO4·2H2O)、砷酸钠(Na3AsO4)和雄黄(As4S4)因其在矿山废物系统中的重要性而被选择。采用主成分分析和靶标转化的统计方法来确定HERFD是否改善了参考化合物混合物数据集中成分的鉴定。对从矿山废物样品中收集的HERFD-和总荧光产率(TFY)-XNES光谱进行LCF。与透射XANES光谱相比,合成的HERFD-XANES光谱中毒砂、砷石、雌黄和砷酸钠的鉴定更准确。在含有毒砂和焦黄铁矿或钾铁矿的矿山废物样品中,与同时收集的TFY测量相比,采用HERFD-XANES测量的LCF与较小的R因子拟合。HERFD-XANES分析准确性的提高可以增强对控制矿山废物、受污染土壤和修复系统中生物地球化学反应的As相的描述。
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引用次数: 0
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Journal of Synchrotron Radiation
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