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A compact gas attenuator for the SwissFEL ATHOS beamline realized using additive manufacturing. 采用增材制造技术实现了瑞士电子激光器ATHOS光束线的紧凑型气体衰减器。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2023-07-01 DOI: 10.1107/S1600577523004241
Claude Pradervand, Colette Rosenberg, Hans Jörg Eckerlin, Kirsten Schnorr, Andre Al Haddad, Peter Wiegand, Christoph Hess, Nazareno Gaiffi, Luc Patthey

Gas attenuators are important devices providing accurate variation of photon intensity for soft X-ray beamlines. In the SwissFEL ATHOS beamline front-end the space is very limited and an innovative approach has been taken to provide attenuation of three orders of magnitude up to an energy of 1200 eV. Additive manufacturing of a differential pumping system vacuum manifold allowed a triple pumping stage to be realized in a space of less than half a meter. Measurements have shown that the response of the device is as expected from theoretical calculations.

气体衰减器是为软x射线光束提供精确的光子强度变化的重要装置。在SwissFEL ATHOS波束线前端空间非常有限,采用了一种创新的方法来提供高达1200 eV能量的三个数量级的衰减。差动抽气系统真空歧管的增材制造可以在不到半米的空间内实现三重抽气阶段。测量结果表明,该装置的响应符合理论计算的预期。
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引用次数: 1
Online absolute calibration of fast FEL pulse energy measurements. 快速FEL脉冲能量测量的在线绝对校准。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2023-05-01 DOI: 10.1107/S1600577523001133
Pavle Juranić, Arturo Alarcon, Rasmus Ischebeck

One of the challenges facing modern free-electron laser (FEL) facilities is the accurate pulse-to-pulse online measurement of the absolute flux of the X-ray pulses, for use by both machine operators for optimization and users of the photon beam to better understand their data. This manuscript presents a methodology that combines existing slow-measurement methods currently used in gas detectors across the world and fast uncalibrated signals from multipliers, meant for relative flux pulse-to-pulse measurements, which create a shot-to-shot absolute flux measurement through the use of sensor-based conditional triggers and algorithms at SwissFEL.

现代自由电子激光(FEL)设备面临的挑战之一是对x射线脉冲的绝对通量进行精确的脉冲对脉冲在线测量,以供机器操作员进行优化和光子光束的用户更好地理解他们的数据。本文提出了一种方法,该方法结合了目前在世界各地的气体探测器中使用的现有慢速测量方法和来自乘法器的快速未校准信号,用于相对通量脉冲对脉冲测量,通过使用基于传感器的条件触发和算法,在瑞士自由电子实验室创建了一个射到射的绝对通量测量。
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引用次数: 0
High-efficiency focusing and imaging by dielectric kinoform zone plate lenses with soft X-rays. 软x射线介质型带板透镜的高效聚焦与成像。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2023-03-01 DOI: 10.1107/S1600577522012115
Xujie Tong, Yifang Chen, Zijian Xu, Yijie Li, Zhenjiang Xing, Chengyang Mu, Jun Zhao, Xiangjun Zhen, Chengwen Mao, Renzhong Tai

With fast advances in enhancing the focusing/imaging resolution of Fresnel zone plate lenses toward sub-10 nm, low diffraction efficiency in connection with their rectangular zone shape still remains a big issue in both soft and hard X-ray microscopy. In hard X-ray optics, encouraging progress has recently been reported in our earlier attempts of high focusing efficiency by 3D kinoform shaped metallic zone plates, formed by greyscale electron beam lithography. This paper addresses our efforts towards high focusing/imaging efficiency by developing a novel dielectric kinoform zone plate lens for soft X-rays. The effects of the zone materials and zone shapes on the focusing/imaging quality were first theoretically investigated by a modified thin-grating-approximation method, revealing superior efficiencies of dielectric kinoform zone plates over rectangular ones in metals. Optical characterizations of replicated dielectric kinoform zone plates by greyscale electron beam lithography demonstrate a focusing efficiency of 15.5% with a resolution of 110 nm in the water window of X-rays. Apart from high efficiency, the novel kinoform zone plate lenses developed in this work exhibit significant advantages over conventional zone plates, i.e. simplified process, low cost and no need for a beamstop.

随着菲涅耳带板透镜聚焦/成像分辨率向10 nm以下方向的快速提高,其矩形带形状导致的衍射效率低仍然是软、硬x射线显微镜中存在的一个大问题。在硬x射线光学领域,我们早期尝试用灰度电子束光刻技术制成的三维金相形金属带板的高聚焦效率取得了令人鼓舞的进展。本文通过开发一种用于软x射线的新型介质型带板透镜,阐述了我们为提高聚焦/成像效率所做的努力。本文首先利用改进的薄光栅近似方法从理论上研究了区域材料和区域形状对聚焦/成像质量的影响,揭示了介质基形带板比金属矩形带板效率更高。用灰阶电子束光刻技术对介电介质双相带片的光学特性进行了表征,结果表明,在x射线的水窗内聚焦效率为15.5%,分辨率为110 nm。除了效率高外,本研究开发的新型基形带片透镜与传统带片相比具有显著的优势,即工艺简化,成本低,不需要光束阻挡。
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引用次数: 0
Hard X-ray full-field nanoimaging using a direct photon-counting detector. 使用直接光子计数探测器进行硬 X 射线全场纳米成像。
IF 2.4 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2023-03-01 Epub Date: 2023-02-01 DOI: 10.1107/S1600577522012103
Silja Flenner, Johannes Hagemann, Felix Wittwer, Elena Longo, Adam Kubec, André Rothkirch, Christian David, Martin Müller, Imke Greving

Full-field X-ray nanoimaging is a widely used tool in a broad range of scientific areas. In particular, for low-absorbing biological or medical samples, phase contrast methods have to be considered. Three well established phase contrast methods at the nanoscale are transmission X-ray microscopy with Zernike phase contrast, near-field holography and near-field ptychography. The high spatial resolution, however, often comes with the drawback of a lower signal-to-noise ratio and significantly longer scan times, compared with microimaging. In order to tackle these challenges a single-photon-counting detector has been implemented at the nanoimaging endstation of the beamline P05 at PETRA III (DESY, Hamburg) operated by Helmholtz-Zentrum Hereon. Thanks to the long sample-to-detector distance available, spatial resolutions of below 100 nm were reached in all three presented nanoimaging techniques. This work shows that a single-photon-counting detector in combination with a long sample-to-detector distance allows one to increase the time resolution for in situ nanoimaging, while keeping a high signal-to-noise level.

全场 X 射线纳米成像是广泛应用于各种科学领域的工具。特别是对于低吸收的生物或医学样品,必须考虑采用相衬方法。在纳米尺度上有三种成熟的相衬方法,即带 Zernike 相衬的透射 X 射线显微镜法、近场全息法和近场层析成像法。然而,与显微成像相比,高空间分辨率往往具有信噪比低和扫描时间长的缺点。为了应对这些挑战,亥姆霍兹中心(Helmholtz-Zentrum Hereon)在 PETRA III(汉堡 DESY)P05 光束线的纳米成像端站安装了单光子计数探测器。由于样品到探测器之间的距离较长,所有三种纳米成像技术的空间分辨率都低于 100 纳米。这项工作表明,单光子计数探测器与较长的样品到探测器距离相结合,可以提高原位纳米成像的时间分辨率,同时保持较高的信噪比水平。
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引用次数: 0
MAXPEEM: a spectromicroscopy beamline at MAX IV laboratory. MAXPEEM: MAX IV实验室的光谱显微镜光束线。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2023-03-01 DOI: 10.1107/S160057752300019X
Yuran Niu, Nikolay Vinogradov, Alexei Preobrajenski, Claudia Struzzi, Brice Sarpi, Lin Zhu, Evangelos Golias, Alexei Zakharov

MAXPEEM, a dedicated photoemission electron microscopy beamline at MAX IV Laboratory, houses a state-of-the-art aberration-corrected spectroscopic photoemission and low-energy electron microscope (AC-SPELEEM). This powerful instrument offers a wide range of complementary techniques providing structural, chemical and magnetic sensitivities with a single-digit nanometre spatial resolution. The beamline can deliver a high photon flux of ≥1015 photons s-1 (0.1% bandwidth)-1 in the range 30-1200 eV with full control of the polarization from an elliptically polarized undulator. The microscope has several features which make it unique from similar instruments. The X-rays from the synchrotron pass through the first beam separator and impinge the surface at normal incidence. The microscope is equipped with an energy analyzer and an aberration corrector which improves both the resolution and the transmission compared with standard microscopes. A new fiber-coupled CMOS camera features an improved modulation transfer function, dynamic range and signal-to-noise ratio compared with the traditional MCP-CCD detection system.

MAXPEEM是MAX IV实验室专用的光发射电子显微镜光束线,拥有最先进的像差校正光谱光发射和低能电子显微镜(AC-SPELEEM)。这种强大的仪器提供了广泛的互补技术,提供了一位数纳米空间分辨率的结构,化学和磁灵敏度。该光束线可以在30-1200 eV范围内提供≥1015个光子s-1(0.1%带宽)-1的高光子通量,并且可以完全控制椭圆偏振波动器的偏振。这种显微镜有几个特点,使它在同类仪器中独树一帜。来自同步加速器的x射线通过第一束分离器并以正常入射撞击表面。该显微镜配备了能量分析仪和像差校正器,与标准显微镜相比,提高了分辨率和透射率。与传统的MCP-CCD检测系统相比,新型光纤耦合CMOS相机具有更好的调制传递功能、动态范围和信噪比。
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引用次数: 2
FOCUS: fast Monte Carlo approach to coherence of undulator sources. 焦点:快速蒙特卡罗方法的相干波动源。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2023-01-01 DOI: 10.1107/S1600577522010748
M Siano, G Geloni, B Paroli, D Butti, T Lefèvre, S Mazzoni, G Trad, U Iriso, A A Nosych, L Torino, M A C Potenza

FOCUS (Fast Monte CarlO approach to Coherence of Undulator Sources) is a new GPU-based simulation code to compute the transverse coherence of undulator radiation from ultra-relativistic electrons. The core structure of the code, which is written in the language C++ accelerated with CUDA, combines an analytical description of the emitted electric fields and massively parallel computations on GPUs. The combination is rigorously justified by a statistical description of synchrotron radiation based on a Fourier optics approach. FOCUS is validated by direct comparison with multi-electron Synchrotron Radiation Workshop (SRW) simulations, evidencing a reduction in computation times by up to five orders of magnitude on a consumer laptop. FOCUS is then applied to systematically study the transverse coherence in typical third- and fourth-generation facilities, highlighting peculiar features of undulator sources close to the diffraction limit. FOCUS is aimed at fast evaluation of the transverse coherence of undulator radiation as a function of the electron beam parameters, to support and help prepare more advanced and detailed numerical simulations with traditional codes like SRW.

FOCUS (Fast Monte CarlO approach to Coherence of波动源)是一种新的基于gpu的计算超相对论电子波动源辐射横向相干性的仿真代码。代码的核心结构是用c++语言编写的,使用CUDA加速,结合了对发射电场的分析描述和gpu上的大规模并行计算。基于傅立叶光学方法的同步辐射统计描述严格证明了这一组合。FOCUS通过与多电子同步辐射车间(SRW)模拟的直接比较进行了验证,证明在消费级笔记本电脑上计算时间减少了多达五个数量级。然后应用FOCUS系统地研究了典型的第三代和第四代设备的横向相干性,突出了接近衍射极限的波动源的特有特征。FOCUS旨在快速评估波动辐射的横向相干性作为电子束参数的函数,以支持和帮助用SRW等传统代码准备更先进和详细的数值模拟。
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引用次数: 2
A compact-rigid multi-analyser for energy and angle filtering of high-resolution X-ray experiments. Part 2. Efficiency of a single-crystal-comb. 用于高分辨率x射线实验的能量和角度滤波的紧凑刚性多分析仪。第2部分。单晶梳的效率。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2023-01-01 DOI: 10.1107/S1600577522011250
J L Hodeau, A Prat, N Boudet, N Blanc, S Arnaud, J L Hazemann, E Lahéra, O Proux, M Jacquet, P O Autran, C Dejoie, P Martinetto

Diffraction instruments using filtering by one or several analyser crystals exist since the 1980s and 1990s at synchrotron radiation sources, but, due to its low efficiency, this filtering is little used on laboratory sources. In order to overcome this limitation, the efficiency of a small diffraction filtering multi-analyzer block (MAD block) realized with a `single-crystal-comb' curved on a rigid support is demonstrated here. The geometry of this curved surface is logarithmic spiral and is optimized to allow multi-filtering over a relatively important diffraction angular range and to be also applicable over an X-ray spectral range. The efficiency of such a small rigid-compact MAD block consisting of this single-crystal-comb generating 20-50 Si(111) single-crystal blades, associated with a block of Soller collimators, is demonstrated. The angle between each crystal is 0.1°, so the measurement range of the comb is 2-5°. The geometry of this system has been optimized for operation with a synchrotron X-ray source over an energy range of 22 keV to 46 keV and could be used with laboratory X-ray sources (Ag Kα1, 22.1 keV). This MAD block complements and exploits the qualities of the `photon-counting' detectors which have very low intrinsic noise. Their joint efficacy is supported by powder pattern measurements of a LaB6 reference sample and of several heterogeneous samples of cultural heritage materials, carried out at 22 keV on the D2AM beamline at the ESRF. Their signal-to-noise ratio is excellent (1000/1) and allows the detection thresholds of the measurements (from 3-1% to 0.1%) to detect minor phases in the studies of `real' heterogeneous materials to be drastically improved.

自20世纪80年代和90年代以来,在同步辐射源上使用一个或几个分析晶体滤波的衍射仪器已经存在,但是,由于其效率低,这种滤波很少用于实验室源。为了克服这一限制,本文演示了在刚性支架上弯曲的“单晶梳”实现的小型衍射滤波多分析仪块(MAD块)的效率。该曲面的几何形状为对数螺旋形,并经过优化,允许在相对重要的衍射角范围内进行多重滤波,也适用于x射线光谱范围。这种由单晶梳组成的小型刚性紧凑的MAD块的效率得到了证明,该单晶梳产生20-50 Si(111)单晶叶片,并与一块Soller准直器相关联。每个晶体之间的角度为0.1°,因此梳的测量范围为2-5°。该系统的几何结构经过优化,可以在22 keV至46 keV的同步辐射x射线源下运行,并且可以与实验室x射线源(Ag Kα1, 22.1 keV)一起使用。这种MAD模块补充并利用了具有非常低固有噪声的“光子计数”探测器的特性。在ESRF的D2AM波束线上,在22 keV下对LaB6参考样品和几种异质文化遗产材料样品进行了粉末模式测量,支持了它们的联合功效。它们的信噪比非常好(1000/1),并且允许测量的检测阈值(从3-1%到0.1%)来检测“真实”非均质材料研究中的小相位,从而大大提高。
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引用次数: 0
Fly-scan-oriented motion analyses and upgraded beamline integration architecture for the High-Dynamic Double-Crystal Monochromator at Sirius/LNLS. Sirius/LNLS高动态双晶单色仪的苍蝇扫描定向运动分析和升级的光束线集成架构。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2023-01-01 DOI: 10.1107/S1600577522010724
Renan Ramalho Geraldes, Sergio Augusto Lordano Luiz, João Leandro de Brito Neto, Telles René Silva Soares, Ricardo Donizeth Dos Reis, Guilherme A Calligaris, Gert Witvoet, J P M B Vermeulen

The High-Dynamic Double-Crystal Monochromator (HD-DCM) is a mechatronic system with unique control-based architecture and deep paradigm changes as compared with traditional beamline monochromators. Aiming at unprecedented inter-crystal positioning stability in vertical-bounce double-crystal monochromators (DCMs) of the order of 10 nrad RMS (1 Hz to 2.5 kHz), and not only in fixed-energy but also in fly-scan operation, it has been developed according to a `first-time right' predictive design approach for hard X-ray beamlines at Sirius, the fourth-generation light source at the Brazilian Synchrotron Light Laboratory (LNLS/CNPEM). This work explores some of the challenges that emerge with this new technology and presents the latest commissioning results that demonstrate the unparallel performances of the HD-DCM at the undulator-based EMA (Extreme Methods of Analysis) beamline at Sirius. With the enabled fast spectroscopy fly-scan possibilities, a new energy-tuning evaluation method, based on wave-propagation simulations, becomes part of a motion-oriented analysis that is carried out to derive the multi-axis non-linear positioning problem, covering not only energy selection and fixed exit in the HD-DCM but also the emission spectrum of an adjustable-phase undulator (APU). The HD-DCM control scheme and its flexible operation modes are described in detail as well. Furthermore, a new integration topology between the HD-DCM and EMA's APU, coming already close to ultimate motion levels, is described and validated.

高动态双晶单色仪(HD-DCM)是一种机电一体化系统,与传统的光束线单色仪相比,具有独特的基于控制的结构和深刻的模式变化。针对垂直弹跳双晶单色仪(dcm)中10 nrad RMS (1hz至2.5 kHz)量级的前所未有的晶体间定位稳定性,不仅在固定能量中,而且在飞行扫描操作中,它已根据巴西同步加速器光实验室(LNLS/CNPEM)的第4代光源Sirius的硬x射线光束线的“首次正确”预测设计方法开发。这项工作探讨了这项新技术出现的一些挑战,并展示了最新的调试结果,这些结果证明了HD-DCM在Sirius基于波动器的EMA(极端分析方法)波束线上的无与伦比的性能。由于实现了快速光谱飞行扫描的可能性,一种基于波传播模拟的新的能量调谐评估方法成为运动导向分析的一部分,用于推导多轴非线性定位问题,不仅涵盖HD-DCM中的能量选择和固定出口,还包括可调相位波动器(APU)的发射光谱。详细介绍了HD-DCM的控制方案及其灵活的运行方式。此外,描述并验证了HD-DCM和EMA APU之间的新集成拓扑,该拓扑已经接近最终运动水平。
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引用次数: 1
ROI-Finder: machine learning to guide region-of-interest scanning for X-ray fluorescence microscopy. ROI-Finder:机器学习引导感兴趣的区域扫描x射线荧光显微镜。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-11-01 DOI: 10.1107/S1600577522008876
M A Z Chowdhury, K Ok, Y Luo, Z Liu, S Chen, T V O'Halloran, R Kettimuthu, A Tekawade

The microscopy research at the Bionanoprobe (currently at beamline 9-ID and later 2-ID after APS-U) of Argonne National Laboratory focuses on applying synchrotron X-ray fluorescence (XRF) techniques to obtain trace elemental mappings of cryogenic biological samples to gain insights about their role in critical biological activities. The elemental mappings and the morphological aspects of the biological samples, in this instance, the bacterium Escherichia coli (E. Coli), also serve as label-free biological fingerprints to identify E. coli cells that have been treated differently. The key limitations of achieving good identification performance are the extraction of cells from raw XRF measurements via binary conversion, definition of features, noise floor and proportion of cells treated differently in the measurement. Automating cell extraction from raw XRF measurements across different types of chemical treatment and the implementation of machine-learning models to distinguish cells from the background and their differing treatments are described. Principal components are calculated from domain knowledge specific features and clustered to distinguish healthy and poisoned cells from the background without manual annotation. The cells are ranked via fuzzy clustering to recommend regions of interest for automated experimentation. The effects of dwell time and the amount of data required on the usability of the software are also discussed.

阿贡国家实验室的Bionanoprobe(目前在光束线9-ID和APS-U后的2-ID)的显微镜研究重点是应用同步加速器x射线荧光(XRF)技术获得低温生物样品的痕量元素映射,以深入了解它们在关键生物活动中的作用。元素映射和形态方面的生物样品,在这种情况下,细菌大肠杆菌(大肠杆菌),也作为无标记的生物指纹,以识别大肠杆菌细胞已处理不同。实现良好识别性能的关键限制是通过二进制转换从原始XRF测量中提取细胞,特征定义,噪声底限和测量中处理不同细胞的比例。描述了从不同类型的化学处理的原始XRF测量中自动提取细胞,以及机器学习模型的实现,以区分背景和不同处理的细胞。从领域知识的特定特征中计算主成分并聚类以区分健康细胞和中毒细胞,无需人工注释。通过模糊聚类对细胞进行排序,推荐感兴趣的区域进行自动化实验。讨论了停留时间和所需数据量对软件可用性的影响。
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引用次数: 0
Upgraded imaging capabilities at the BAMline (BESSY II). 升级BAMline (BESSY II)的成像能力。
IF 2.5 3区 物理与天体物理 Q2 INSTRUMENTS & INSTRUMENTATION Pub Date : 2022-09-01 Epub Date: 2022-08-17 DOI: 10.1107/S1600577522007342
H Markötter, M Sintschuk, R Britzke, S Dayani, G Bruno

The BAMline at the BESSY II synchrotron X-ray source has enabled research for more than 20 years in widely spread research fields such as materials science, biology, cultural heritage and medicine. As a nondestructive characterization method, synchrotron X-ray imaging, especially tomography, plays a particularly important role in structural characterization. A recent upgrade of key equipment of the BAMline widens its imaging capabilities: shorter scan acquisition times are now possible, in situ and operando studies can now be routinely performed, and different energy spectra can easily be set up. In fact, the upgraded double-multilayer monochromator brings full flexibility by yielding different energy spectra to optimize flux and energy resolution as desired. The upgraded detector (based on an sCMOS camera) also allows exploiting the higher flux with reduced readout times. Furthermore, an installed slip ring allows the sample stage to continuously rotate. The latter feature enables tomographic observation of processes occurring in the time scale of a few seconds.

BESSY II同步加速器x射线源的BAMline已经在材料科学,生物学,文化遗产和医学等广泛的研究领域进行了20多年的研究。同步辐射x射线成像,尤其是断层成像,作为一种无损表征方法,在结构表征中起着尤为重要的作用。最近对BAMline关键设备的升级扩大了其成像能力:现在可以缩短扫描采集时间,现在可以常规进行原位和操作研究,并且可以轻松设置不同的能谱。事实上,升级后的双多层单色仪通过产生不同的能谱来优化通量和能量分辨率,从而带来了充分的灵活性。升级的探测器(基于sCMOS相机)也允许利用更高的通量,减少读出时间。此外,安装的滑环允许样品台连续旋转。后一个特征使层析观察过程发生在几秒钟的时间尺度。
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引用次数: 3
期刊
Journal of Synchrotron Radiation
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