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Spin-orbit effects on the ring current strengths of the substituted cyclophosphazene: c $$ c $$ -P 3 $$ {}_3 $$ N 3 $$ {}_3 $$ X 6 $$ {}_6 $$ ( X=H, F, Cl, Br, I, At, Ts ) $$ left(mathbf{X}=mathbf{H},mathbf{F},mathbf{Cl},mathbf{Br},mathbf{I},mathbf{At},mathbf{Ts}right) $$ 自旋轨道效应对取代环膦氮烷环电流强度的影响: c$ c$ -P 3 $$ {}_3 $$ N 3 $$ {}_3 $$ X 6 $$ {}_6 $$ (X=H、F, Cl, Br, I, At, Ts ) $$ left(mathbf{X}=mathbf{H},mathbf{F},mathbf{Cl},mathbf{Br},mathbf{I},mathbf{At},mathbf{Ts}right) $$
IF 2.2 3区 化学 Q2 Physics and Astronomy Pub Date : 2024-06-03 DOI: 10.1002/qua.27431
Rodrigo Ramirez-Tagle, Luis Alvarez-Thon

This work reports the magnetic index of aromaticity of cyclophosphazene (c$$ c $$-P3$$ {}_3 $$N3$$ {}_3 $$H6$$ {}_6 $$) and their halogenated cyclic derivatives: c$$ c $$-P3$$ {}_3 $$N3$$ {}_3 $$F6$$ {}_6 $$, c$$ c $$-P3
This work reports the magnetic index of aromaticity of cyclophosphazene ( c $$ c $$ -P 3 $$ {}_3 $$ N 3 $$ {}_3 $$ H 6 $$ {}_6 $$ ) and their halogenated cyclic derivatives: c $$ c $$ -P 3 $$ {}_3 $$ N 3 $$ {}_3 $$ F 6 $$ {}_6 $$ , c $$ c $$ -P 3 $$ {}_3 $$ N 3 $$ {}_3 $$ Cl 6 $$ {}_6 $$ , c $$ c $$ -P 3 $$ {}_3 $$ N 3 $$ {}_3 $$ Br 6 $$ {}_6 $$ , c $$ c $$ -P 3 $$ {}_3 $$ N 3 $$ {}_3 $$ I 6 $$ {}_6 $$ , c $$ c $$ -P 3 $$ {}_3 $$ N 3 $$ {}_3 $$ At 6 $$ {}_6 $$ and c $$ c $$ -P 3 $$ {}_3 $$ N 3 $$ {}_3 $$ Ts 6
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引用次数: 0
Theoretical studies on the kinetics and mechanism of hydroxyl radical reaction with quinclorac and quinmerac herbicides in aqueous media 水介质中羟基自由基与喹啉草醚和喹乙醇除草剂反应的动力学和机理的理论研究
IF 2.2 3区 化学 Q2 Physics and Astronomy Pub Date : 2024-06-03 DOI: 10.1002/qua.27430
Hari P. Upadhyaya

The kinetic and mechanistic studies for the reaction of hydroxyl radical with two quinoline based herbicides, namely, quinclorac and quinmerac has been performed using various computational methods in aqueous media. Geometry optimizations were performed using Density Functional Theory (DFT) methods including water as the solvent. Local reactivity parameters of these herbicides towards the OH radical are predicted using condensed Fukui function. Single point energies of various species were calculated using double hybrid method, namely, B2PLYP–D for better accuracy. The pKa values for these acid based herbicides allow them to exist in deprotonated form in aqueous condition. Hence, the calculations are also performed for the deprotonated or the anionic form apart from the neutral species. Individual rate coefficients for OH radical addition reaction with each carbon atoms were evaluated using conventional transition state theory using one–dimensional tunneling corrections. The solvent effect on reaction is implemented through Collins–Kimball formulations. Both the approaches, namely, the Fukui index and individual rate constant determination confirms that the most reactive site for the OH radical addition in these two herbicide is the carbon atom attached to the COOH group. The total rate constant for the OH radical reaction with both neutral and anionic forms of these two herbicides are relatively high and equal to its diffusion-limit value. Evaluation of the ecotoxicities of the parent herbicides and their OH adducts is estimated using the structure–activity relationship concept.

在水介质中,使用各种计算方法对羟基自由基与两种喹啉类除草剂(即喹咯草酮和喹美拉克)反应的动力学和机理进行了研究。使用密度泛函理论(DFT)方法(包括以水为溶剂)进行了几何优化。使用凝聚福井函数预测了这些除草剂对-OH 自由基的局部反应性参数。为了获得更高的精确度,使用双杂交方法(即 B2PLYP-D)计算了各种物种的单点能量。这些酸性除草剂的 pKa 值允许它们在水溶液条件下以去质子形式存在。因此,除中性除草剂外,还对去质子或阴离子形式进行了计算。采用传统的过渡态理论,利用一维隧道修正,评估了-OH 自由基与每个碳原子加成反应的单个速率系数。溶剂对反应的影响是通过柯林斯-金博尔公式实现的。这两种方法,即 Fukui 指数和单个速率常数的测定,都证实了这两种除草剂中 -OH 自由基加成反应最活跃的部位是与 COOH 基团相连的碳原子。这两种除草剂与中性和阴离子形式的 -OH 自由基反应的总速率常数相对较高,且等于其扩散极限值。利用结构-活性关系概念对母体除草剂及其 OH 加合物的生态毒性进行了评估。
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引用次数: 0
A comparative study of analytical representations of potential energy curves for CO in its ground electronic state 一氧化碳基态电子势能曲线分析表述的比较研究
IF 2.2 3区 化学 Q2 Physics and Astronomy Pub Date : 2024-06-03 DOI: 10.1002/qua.27429
Judith P. Araújo, Isadora G. Lugão, Rafael P. Silva, Mariana P. Martins, Ituen B. Okon, Clement A. Onate

In this work, a comparative study of four functional forms used to represent potential energy curves (PECs) is presented. The starting point is the Hulburt-Hirschfelder, followed by the Extended Rydberg potential function, ending with two of the most recent potentials presented in the literature for diatomic systems: the Araújo-Ballester potential and the Improved Extended Lennard-Jones potential. The chosen potentials have in common the fact that all their parameters are algebraically calculated, without any fitting procedure, and all of them have direct dependence on Dunham's parameters. The mathematical behavior of these functions for the short- and long-range regions is discussed. As study case, the diatomic system CO$$ mathrm{CO} $$ in its ground electronic state was selected. To quantify the accuracy of the potential energy functions, the least-squares Z-test method, proposed by Murrell and Sorbie, is used. Furthermore, the main spectroscopic constants and vibrational energy levels are calculated and compared for all potentials.

在这项工作中,对用于表示势能曲线(PEC)的四种函数形式进行了比较研究。起点是 Hulburt-Hirschfelder,其次是扩展雷德贝格势函数,最后是文献中最新提出的两种二原子系统势函数:Araújo-Ballester 势函数和改进的扩展伦纳德-琼斯势函数。所选势垒的共同点是,它们的所有参数都是通过代数计算得出的,不需要任何拟合过程,而且都直接依赖于杜纳姆参数。我们讨论了这些函数在短程和长程区域的数学行为。作为研究案例,选择了处于基态电子状态的二原子系统 CO $$ mathrm{CO} $$。为了量化势能函数的准确性,采用了 Murrell 和 Sorbie 提出的最小二乘 Z 检验法。此外,还计算并比较了所有势能的主要光谱常数和振动能级。
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引用次数: 0
Structure-property modeling of pharmacokinetic characteristics of anticancer drugs via topological indices, multigraph modeling and multi-criteria decision making 通过拓扑指数、多图建模和多标准决策建立抗癌药物药代动力学特征的结构-属性模型
IF 2.2 3区 化学 Q2 Physics and Astronomy Pub Date : 2024-06-03 DOI: 10.1002/qua.27428
Ugasini Preetha Pandi, Sakander Hayat, Suresh Marimuthu, Julietraja Konsalraj

This study presents an in-depth inquiry into estimating ADME properties for promising anticancer drugs, particularly amino acid-based alkylating agents, through ev-ve degree topological indices and QSPR analysis. The aim of the study is to compare multigraph modeling to simple graph modeling in estimating six ADME properties. Results demonstrate that multigraph modeling's superior performance, with notable high correlations such as r=0.926$$ r=0.926 $$ for maximum passive absorption (MPA) using the M-ev index, compared to simple graph modeling's r=0.68$$ r=0.68 $$ with the M2$$ {M}_2 $$-ev index. This emphasizes the need for sophisticated modeling techniques in drug development. The primary objective is to compare multigraph and simple graph modeling using topological structure descriptors, followed by QSPR analysis to determine the better approach in estimating ADME properties. MCDM weight allocation techniques validate correlation values, enhancing understanding of estimators and identifying potential drugs. This underscores the importance of considering various MCDM methods and weight allocation approaches for reliable decision-making in healthcare contexts.

本研究通过ev-ve度拓扑指数和QSPR分析,深入探讨了如何估算有前景的抗癌药物(尤其是氨基酸类烷化剂)的ADME特性。研究的目的是比较多图建模与简单图建模在估计六种 ADME 特性方面的不同。结果表明,多图建模性能优越,具有显著的高相关性,如 r = 0 . 926 $$ r=0.926 $$ 与简单图形建模的 r = 0 . 68 $$ r=0.68 $$ 采用 M 2 $$ {M}_2 $$ -ev 指数。这说明在药物研发中需要复杂的建模技术。主要目的是比较使用拓扑结构描述符的多图建模和简单图建模,然后进行 QSPR 分析,以确定估计 ADME 特性的更好方法。MCDM 权重分配技术验证了相关值,增强了对估算器的理解,并确定了潜在药物。这强调了考虑各种 MCDM 方法和权重分配方法对于医疗保健领域可靠决策的重要性。
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引用次数: 0
Probing Collins Conjecture with correlation energies and entanglement entropies for the ground and excited states in the helium iso-electronic sequence 用氦等电子序列中基态和激发态的相关能和纠缠熵探测柯林斯猜想
IF 2.2 3区 化学 Q2 Physics and Astronomy Pub Date : 2024-05-30 DOI: 10.1002/qua.27420
Yen-Chang Lin, Yew Kam Ho

In the present work, we present an investigation of Collins Conjecture, a hypothesis made by D. M. Collins in 1993 relating correlation energy and entanglement entropy, by calculating the ground state and singly-excited triplet-spin 1s2s 3S and 1s3s 3S state energies of the helium iso-electronic sequence, with Z = 2–15. By using extensive orthonormal configuration interaction (CI) type wave functions with B-Spline basis up to about 6000 terms, linear entropy and von Neumann entropy for the abovementioned atomic systems are determined. Together with the Hartree-Fock energies obtained following a self-consistent field theory, we have found that there exist linearly proportionalities between the renormalized correlation energies and entanglement entropies of both linear and von Neumann, showing a support for Collins Conjecture applicable to the ground and singly-excited triplet-spin states in the helium sequence, for a range of finite Z-values.

在本研究中,我们通过计算氦等电子序列(Z = 2-15)的基态和单激发三重自旋 1s2s 3S 和 1s3s 3S 态能量,对柯林斯猜想(D. M. Collins 于 1993 年提出的关于相关能和纠缠熵的假设)进行了研究。通过使用广泛的正交构型相互作用(CI)型波函数和多达约 6000 项的 B-Spline,确定了上述原子系统的线性熵和冯-诺依曼熵。结合根据自洽场理论得到的哈特里-福克能量,我们发现重归一化相关能与线性熵和冯-诺伊曼熵之间存在线性比例关系,这表明柯林斯猜想得到了支持,该猜想适用于氦序列中有限 Z 值范围内的基态和单激发三重自旋态。
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引用次数: 0
Theory study on catalytic hydrogenation of CO2 to formic acid over Si, N-doped modified graphene quantum dots supported single atom Fe 硅、掺 N 改性石墨烯量子点支撑单原子铁催化 CO2 加氢制甲酸的理论研究
IF 2.2 3区 化学 Q2 Physics and Astronomy Pub Date : 2024-05-30 DOI: 10.1002/qua.27425
Fangfang Li, Xunchao Zhang, Lihua Kang

Exploring suitable catalysts to catalyze the chemical transformation of CO2 molecules is essential to reduce CO2 levels. In this article, catalyst models of Fe-C4, Fe-N4, and Fe-Si4 were constructed using the density functional theory (DFT) calculations, and the reaction mechanisms of CO2 hydrogenation over these three catalysts were calculated and analyzed. The results showed that the doping of N atoms lowered the energy barrier of the second hydrogenation step compared with that of Fe-C4 catalyst, while the doping of Si atoms changed the electron distribution on the surface of the catalyst and formed new Si adsorption sites. And the Fe-Si4 catalyst had a stronger ability to activate CO2 molecules as well as stronger catalytic performance compared with the Fe-C4 and Fe-N4 catalysts, which was mainly attributed to the synergistic catalytic effect between the doped Si atoms and the Fe metal atom.

探索合适的催化剂来催化二氧化碳分子的化学转化对于降低二氧化碳含量至关重要。本文利用密度泛函理论(DFT)计算,构建了Fe-C4、Fe-N4和Fe-Si4催化剂模型,并计算分析了这三种催化剂的二氧化碳加氢反应机理。结果表明,与 Fe-C4 催化剂相比,N 原子的掺杂降低了第二步加氢的能垒;而 Si 原子的掺杂改变了催化剂表面的电子分布,形成了新的 Si 吸附位点。与 Fe-C4 和 Fe-N4 催化剂相比,Fe-Si4 催化剂活化 CO2 分子的能力更强,催化性能也更高,这主要归功于掺杂的 Si 原子与 Fe 金属原子之间的协同催化作用。
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引用次数: 0
QSPR analysis for certain bio-molecular architectures 某些生物分子结构的 QSPR 分析
IF 2.2 3区 化学 Q2 Physics and Astronomy Pub Date : 2024-05-30 DOI: 10.1002/qua.27423
P. Noah Antony Daniel Renai, S. Roy, S. Govardhan

Flavonoids are known for its mechanism of antioxidant property which can prevent DNA damage. These natural products' anticancer and antiviral properties are linked to their mechanism of action. Various examinations reveals that, there will be a adjacent relationship between the molecular structure and their physicochemical properties such as boiling point, melting point, entropy, and so forth. In this work we have presented the physicochemical analysis and determination of π$$ pi $$-electron energy for some bio-molecular structures namely Erythroxylum Flavonoids, DNA (deoxyribonuclic acid), and RNA (ribonuclic acid). Additionally, the QSPR analysis of bio-molecular structures using ten degree based topological indices are discussed to assist researchers in understanding the chemical reactions and physical properties related with them. Furthermore, we demonstrated that the indices values correlate well with the physicochemical properties of flavonoids, DNA, and RNA molecular structures from the presented regression model.

类黄酮因其抗氧化机制而闻名,它可以防止 DNA 受损。这些天然产品的抗癌和抗病毒特性与其作用机制有关。各种研究表明,分子结构与其理化性质(如沸点、熔点、熵等)之间存在着相邻关系。在这项工作中,我们介绍了一些生物分子结构(即红豆杉类黄酮、DNA(脱氧核糖核酸)和 RNA(核糖核酸))的理化分析和 π $$ pi $$ - 电子能量的测定。此外,我们还讨论了使用十度拓扑指数对生物分子结构进行 QSPR 分析,以帮助研究人员了解与之相关的化学反应和物理性质。此外,我们还通过所提出的回归模型证明了这些指数值与类黄酮、DNA 和 RNA 分子结构的理化性质有很好的相关性。
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引用次数: 0
Synergistic modulation of SLME and thermal transport toward promising p-type lead-free halide semiconductors In2TiX6 (X = Br, I) via first principles analysis 通过第一性原理分析,对有前景的 p 型无铅卤化物半导体 In2TiX6 (X = Br, I) 的 SLME 和热传输进行协同调制
IF 2.2 3区 化学 Q2 Physics and Astronomy Pub Date : 2024-05-30 DOI: 10.1002/qua.27424
Jaidev Kumbhakar, Jisha Annie Abraham, Anshuman Srivastava, K. L. Meena, Mumtaz Manzoor, Ayman A. Ghfar, Ramesh Sharma

Lead halide perovskites have been replaced by the environmentally acceptable and effective lead-free double perovskite material. Double perovskites are innovative compounds for sustainable energy and budding substitutes to organic as well as lead-based solar cells. In the current study, it has been expounded on the structural, electronic, thermoelectric, as well as thermodynamic characteristics of newly designed double perovskites In2TiX6 (X = Br, I) by means of ab-initio computations relied on the FP-LAPW tactics and semi-classical Boltzmann transport theory with PBE-GGA as exchange correlation potential. To obtain accurate value of band gaps (1.294 eV and 1.025 eV), TB-mBJ approximation has been used along with PBE-GGA. The best combinations of both compounds have spectroscopic limited maximum efficiency (SLME) values 33.96% and 31.63%, that are appropriate for solar cell absorbers, at 300 K, respectively. We have also computed Debye temperature θD$$ left({theta}_Dright) $$ and Grüneisen parameter γ$$ left(gamma right) $$ to find the lattice thermal conductivity for both the investigated alloys. Thermoelectric properties have been labeled by Seebeck coefficient, electrical as well as thermal conductivities, and figure of merit. The peak values of Seebeck coefficient of 248 μV/K and 202 μV/K are observed for In2TiBr6 and In2TiI6 respectively in the p-type regions. Attained results illustrates that the investigated In2TiX6 may be contender in thermoelectric due to their high figure of merit in low as moderate temperatures. Our results suggest that these materials are viable for use in thermoelectric devices.

卤化铅包晶石已被环保、高效的无铅双包晶石材料所取代。双包晶石是可持续能源的创新化合物,是有机太阳能电池和铅基太阳能电池的新兴替代品。在当前的研究中,我们利用 FP-LAPW 战术和半经典波尔兹曼输运理论,以 PBE-GGA 作为交换相关势,通过非线性计算阐述了新设计的双包晶 In2TiX6(X = Br,I)的结构、电子、热电和热力学特性。为了获得准确的带隙值(1.294 eV 和 1.025 eV),在使用 PBE-GGA 的同时还使用了 TB-mBJ 近似。这两种化合物的最佳组合分别具有 33.96% 和 31.63% 的光谱有限最大效率(SLME)值,适合在 300 K 下用作太阳能电池吸收剂。我们还计算了德拜温度 θ D$ left({theta}_Dright)$$和格鲁尼森参数 γ $$ left(gammaright)$$,以找出两种所研究合金的晶格热导率。热电性能已用塞贝克系数、电导率、热导率和优点系数标出。在 p 型区,In2TiBr6 和 In2TiI6 的塞贝克系数峰值分别为 248 μV/K 和 202 μV/K。所获得的结果表明,所研究的 In2TiX6 在低温和中温条件下都具有很高的优越性,因此可能成为热电领域的竞争者。我们的研究结果表明,这些材料可用于热电设备。
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引用次数: 0
A density functional theory study of hydrogen storage on Ni and Pd doped hetero GeC nanotubes 掺杂镍和钯的杂质 GeC 纳米管储氢的密度泛函理论研究
IF 2.2 3区 化学 Q2 Physics and Astronomy Pub Date : 2024-05-21 DOI: 10.1002/qua.27421
H. O. Taha, A. M. El Mahdy, M. A. Ramadan

Using ab-initio DFT based simulations, the hydrogen storage capacity of transition metal (TM = Ni, Pd) decorated doped germanium carbide nanotubes (GeCNTs) with heteroatoms (B, N, Ga, and As) has been examined. The study reveals that each Ni atom bonded on GeCB, GeCN, GeCGa, and GeCAs can attach at the most of 3H2, 2H2, 4H2, and 5H2 molecules with an average binding energy of −.36, −.40, −.32, and −.37 eV/H2, respectively. When doped GeCNTs are fully decorated with Ni atoms, their gravimetric hydrogen storage capacities are around 4.05, 2.73, 5.38, and 6.57 wt%, respectively. The desorption temperature of the systems is 460, 511, 404, and 473 K, respectively. When doped GeCNTs are fully decorated with Pd atoms, their gravimetric hydrogen storage capacities are around 2.07, 3.07, 4.05, and 3.07 wt%, respectively. These findings demonstrate that doped-GeC adorned with Pd does not satisfy US DOE hydrogen storage requirements. The molecular dynamic (MD) calculations are utilized to examine the stability of the considered structures. The results demonstrate that Ni-adorned GeCAs are a suitable material for hydrogen storage, which will motivate scientists to fabricate GeCAs-based fuel cell devices.

利用基于原子量有限差分模拟(ab-initio DFT)的方法,研究了带有杂原子(B、N、Ga 和 As)的过渡金属(TM = Ni、Pd)装饰掺杂碳化锗纳米管(GeCNTs)的储氢能力。研究发现,结合在 GeCB、GeCN、GeCGa 和 GeCAs 上的每个镍原子最多可吸附 3H2、2H2、4H2 和 5H2 分子,平均结合能分别为 -.36, -.40, -.32 和 -.37 eV/H2。当掺杂的 GeCNT 被镍原子完全装饰时,它们的重力储氢能力分别约为 4.05、2.73、5.38 和 6.57 wt%。系统的解吸温度分别为 460、511、404 和 473 K。当掺杂的 GeCNT 被钯原子完全装饰时,它们的重力储氢能力分别约为 2.07、3.07、4.05 和 3.07 wt%。这些发现表明,掺杂钯原子的 GeC 无法满足美国能源部的储氢要求。我们利用分子动力学(MD)计算来检验所考虑的结构的稳定性。结果表明,掺有镍的 GeCAs 是一种合适的储氢材料,这将激励科学家们制造基于 GeCAs 的燃料电池装置。
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引用次数: 0
Investigation of the cross sections for electron collision ionization of complex molecules 复杂分子电子碰撞电离截面研究
IF 2.2 3区 化学 Q2 Physics and Astronomy Pub Date : 2024-05-21 DOI: 10.1002/qua.27422
Zhan-Bin Chen

An accurate and computationally efficient determination of the cross sections for electron collision ionization of molecules has various applications, such as plasma physics and atmospheric science. In the case of large molecules, ab initio calculations are often difficult and time-consuming. Here, we develop a feed forward neural network to predict the electron impact ionization cross sections of complex molecules. The training (predicting) set in the method consists of a series of theoretical ionization cross sections for small (large) molecules obtained from the combined model, which integrates the Binary-Encounter-Bethe and Deutsch-Märk models. Several complex systems or targets involving electron collision ionization are evaluated, including molecules such as CH4$$ {}_4 $$, C3$$ {}_3 $$H8$$ {}_8 $$, C5$$ {}_5 $$H8$$ {}_8 $$, C6$$ {}_6 $$H

这项研究除了具有重要的基础意义外,还对气体放电、低温等离子体和聚变边缘等离子体等具有深远的影响。
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引用次数: 0
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International Journal of Quantum Chemistry
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