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High-quality draft genome of Lactiplantibacillus plantarum strain APC2688 isolated from human feces. 从人类粪便中分离出的植物乳杆菌菌株 APC2688 的高质量基因组草案。
IF 0.7 Q4 MICROBIOLOGY Pub Date : 2024-10-14 DOI: 10.1128/mra.00641-24
Benjamin Valderrama, Isabelle Daly, Eoin Gunnigle, Mary C Rea, John Kenny, Mairead Coakley, John F Cryan, Gerard Clarke, Jatin Nagpal

Lactiplantibacillus plantarum is a commensal bacterial species often found within the human gut. To expand our knowledge about this human-associated taxon with potential probiotic properties, here we present the draft genome sequence of Lactiplantibacillus plantarum strain APC2688, isolated from a human fecal sample.

植物乳杆菌(Lactiplantibacillus plantarum)是一种常见于人体肠道的共生细菌。为了扩大我们对这种具有潜在益生特性的人类相关类群的了解,我们在此展示了从人类粪便样本中分离出来的植物乳杆菌菌株 APC2688 的基因组序列草案。
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引用次数: 0
Complete genome sequence of polylactic acid degrading Rhodopseudomonas palustris strain R1 isolated from rice field soil. 从稻田土壤中分离出的降解聚乳酸的古朴红单胞菌 R1 菌株的完整基因组序列。
IF 0.7 Q4 MICROBIOLOGY Pub Date : 2024-10-14 DOI: 10.1128/mra.00814-24
Lala Ito, Mana Masui, Josephine Galipon, Kazuharu Arakawa

Rhodopseudomonas palustris R1 is a phototrophic, purple, non-sulfur Gram-negative bacterium first isolated from the soils of rice fields, known for its polylactic acid degradability. Here, we present the complete circular genome sequence of this bacterium, spanning 5.32 Mbp and 4,949 protein-coding sequences.

淡水红假单胞菌 R1 是一种光营养型、紫色、无硫革兰氏阴性细菌,最早从稻田土壤中分离出来,因其可降解聚乳酸而闻名。在此,我们展示了该细菌的完整环状基因组序列,该序列跨越 5.32 Mbp 和 4,949 个蛋白质编码序列。
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引用次数: 0
Complete genome sequencing of four marine bacteria, Gilvimarinus japonicus NBRC 111987T, Halioxenophilus aromaticivorans JCM 19134T, Maricurvus nonylphenolicus JCM 17778T, and Simiduia litorea JCM 19759T belonging to the family Cellvibrionaceae. 四种海洋细菌的完整基因组测序:日本吉尔维马林菌(Gilvimarinus japonicus NBRC 111987T)、芳香嗜卤菌(Halioxenophilus aromaticivorans JCM 19134T)、壬基酚马利菌(Maricurvus nonylphenolicus JCM 17778T)和茜草菌(Simiduia litorea JCM 19759T),均属于茜草科。
IF 0.7 Q4 MICROBIOLOGY Pub Date : 2024-10-14 DOI: 10.1128/mra.00873-24
Takamasa Miura, Tomoyo Miyakawa, Yoko Kusuya, Kei Kamino

We report on the complete genomes of Gilvimarinus japonicus NBRC 111987T, Halioxenophilus aromaticivorans JCM 19134T, Maricurvus nonylphenolicus JCM 17778T, and Simiduia litorea JCM 19759T, isolated from the sea. Strains JCM 19134T, JCM 17778T, and JCM 19759T contain genes predicted to be polyhydroxyalkanoate-degrading enzymes.

我们报告了从海洋中分离出来的日本吉尔维马林藻(Gilvimarinus japonicus)NBRC 111987T、芳香嗜卤藻类(Halioxenophilus aromaticivorans)JCM 19134T、壬基酚马林藻(Maricurvus nonylphenolicus)JCM 17778T和石花菜(Simiduia litorea)JCM 19759T的完整基因组。JCM 19134T、JCM 17778T 和 JCM 19759T 菌株含有预测为多羟基烷酸降解酶的基因。
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引用次数: 0
Complete genome sequence of deformed wing virus isolated from honeybees (Apis mellifera L.) in Iraq. 从伊拉克蜜蜂(Apis mellifera L.)中分离出的畸形翅病毒的完整基因组序列。
IF 0.7 Q4 MICROBIOLOGY Pub Date : 2024-10-14 DOI: 10.1128/mra.00770-24
Ali Sadiq, Osamah Alisawi, Mohammed Shakir Mansor

Here, we report the complete genome sequence of deformed wing virus (DWV) isolated from honeybees (Apis mellifera L.) in Iraq, named the Tikrit isolate. The phylogeny revealed that the Tikrit isolate has a close relationship to the Iraqi isolate DWV-Iraq-2023 and related to isolates from France, the United Kingdom, and Israel.

在此,我们报告了从伊拉克蜜蜂(Apis mellifera L.)中分离出的畸形翅病毒(DWV)的完整基因组序列,该病毒被命名为提克里特分离株。系统发育显示,提克里特分离株与伊拉克分离株 DWV-Iraq-2023 关系密切,并与法国、英国和以色列的分离株有亲缘关系。
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引用次数: 0
Draft genome of Aeromonas veronii DFR01, the inactivated bacterial agent in a fish oral vaccine against motile aeromonad septicemia. 维龙单胞菌 DFR01 的基因组草案,该菌是鱼类口服疫苗中预防动感气单胞菌败血症的灭活细菌制剂。
IF 0.7 Q4 MICROBIOLOGY Pub Date : 2024-10-14 DOI: 10.1128/mra.00733-24
Anacleto M Argayosa, Paul Christian T Gloria, Vina B Argayosa, Mary Nia M Santos

Aeromonas veronii DFR01 was isolated from Nile tilapia (Oreochromis niloticus) infected with motile aeromonad septicemia and has been developed as an oral vaccine. We report a 4.538-Mb draft genome with 99.4% BUSCO and 98.85% CheckM completeness.

Aeromonas veronii DFR01是从感染动气单胞菌败血症的尼罗罗非鱼(Oreochromis niloticus)中分离出来的,已被开发为口服疫苗。我们报告了一个 4.538-Mb 的基因组草案,其 BUSCO 和 CheckM 的完整性分别为 99.4% 和 98.85%。
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引用次数: 0
Coding complete genomes of an iridovirus and two parvoviruses identified in lab-reared social spiders (Stegodyphus dumicola). 在实验室饲养的社会蜘蛛(Stegodyphus dumicola)中发现的一种虹彩病毒和两种副病毒的完整基因组编码。
IF 0.7 Q4 MICROBIOLOGY Pub Date : 2024-10-14 DOI: 10.1128/mra.00739-24
Sydney Millerwise, Michael C Lund, Kara Schimidlin, Simona Kraberger, Noa Pinter-Wollman, Arvind Varsani

Coding complete genomes of an iridovirus (194,403 nts) and two parvoviruses (4,689, 3,764 nts) were identified in social spiders (Stegodyphus dumicola). The iridovirus and one of the parvovirus are most closely related to those from house crickets (Acheta domesticus), whereas the other is most closely related to one from a social spider.

在社会蜘蛛(Stegodyphus dumicola)中发现了一种虹彩病毒(194,403 nts)和两种副粘病毒(4,689 nts和3,764 nts)的完整基因组编码。其中一种虹彩病毒和一种副病毒与家养蟋蟀(Acheta domesticus)的病毒关系最为密切,而另一种病毒则与社会蜘蛛的病毒关系最为密切。
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引用次数: 0
Completed genome segments of Maciel, Lechiguanas, and Laguna Negra orthohantaviruses. Maciel、Lechiguanas 和 Laguna Negra 正长病毒的完整基因组片段。
IF 0.7 Q4 MICROBIOLOGY Pub Date : 2024-10-14 DOI: 10.1128/mra.00441-24
Elizabeth Shedroff, Shannon L M Whitmer, Melissa Mobley, Maria Morales-Betoulle, Maria Laura Martin, Julia Brignone, Carina Sen, Yael Nazar, Joel M Montgomery, John D Klena

New World orthohantaviruses are rodent-borne tri-segmented viruses that cause hantavirus cardiopulmonary syndrome in humans in the Americas. Molecular diagnostics for orthohantaviruses can be improved with more sequence data. Reported here are completed genomes for Lechiguanas, Maciel, and Laguna Negra viruses.

新世界原汉坦病毒是啮齿类动物传播的三节段病毒,在美洲会导致人类汉坦病毒心肺综合征。有了更多的序列数据,就能改进对原汉坦病毒的分子诊断。本文报告的是 Lechiguanas、Maciel 和 Laguna Negra 病毒的完整基因组。
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引用次数: 0
Complete genome sequence of Sphingobacterium thalpophilum BAA-1094. 嗜盐鞘氨醇杆菌 BAA-1094 的完整基因组序列。
IF 0.7 Q4 MICROBIOLOGY Pub Date : 2024-10-14 DOI: 10.1128/mra.00423-24
Barbara I Adaikpoh, Alessandra S Eustáquio

We report the complete genome of Sphingobacterium thalpophilum BAA-1094 obtained from the American Type Culture Collection. The genome has one circular chromosome (5.7 Mbp). The rather low average nucleotide identity of 76.5% to the type strain Sphingobacterium thalpophilum DSM 11723 suggests the need for reclassification.

我们报告了从美国类型培养物保藏中心(American Type Culture Collection)获得的嗜水鞘杆菌 BAA-1094 的完整基因组。该基因组有一个环状染色体(5.7 Mbp)。与模式菌株 Sphingobacterium thalpophilum DSM 11723 的平均核苷酸同一性相当低(76.5%),这表明有必要对其进行重新分类。
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引用次数: 0
Complete genome sequence of Glycocaulis abyssi type strain LMG 27140, a prosthecate bacterium isolated from an abyssal hydrothermal vent. Glycocaulis abyssi 型菌株 LMG 27140 的完整基因组序列,该菌株是一种从深海热液喷口分离出来的原生细菌。
IF 0.7 Q4 MICROBIOLOGY Pub Date : 2024-10-14 DOI: 10.1128/mra.00984-24
Breah LaSarre, Eva M Kierstead, Amelia M Randich

Glycocaulis abyssi is a dimorphic, prosthecate member of the family Maricaulaceae, order Caulobacterales, in the class Alphaproteobacteria, originally isolated from an abyssal hydrothermal vent. Here, we report the complete genome sequence of type strain LMG 27140T (MCS33T) obtained using Oxford Nanopore technology.

Glycocaulis abyssi 是马利筋科 Caulobacterales 目 Alphaproteobacteria 属中的一种二形前鞘菌,最初从深海热液喷口中分离出来。在此,我们报告了利用牛津纳米孔技术获得的类型菌株 LMG 27140T (MCS33T)的完整基因组序列。
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引用次数: 0
Complete hybrid genome assembly of Mannheimia haemolytica serotype A2 strain D95 isolated from ovine lung. 从绵羊肺中分离的 Mannheimia haemolytica 血清型 A2 菌株 D95 的完整杂交基因组组装。
IF 0.7 Q4 MICROBIOLOGY Pub Date : 2024-10-14 DOI: 10.1128/mra.00552-24
Anna K Goldkamp, Harish Menghwar, Rohana P Dassanayake, Fred M Tatum, Robert E Briggs, Eduardo Casas

Mannheimia haemolytica is a major bacterial pathogen associated with broncho- and fibrinous pneumonia in ruminants. Here, we report the complete genome sequence of an isolate of serotype A2 M. haemolytica (D95) recovered from a pneumonic ovine lung. The D95 genome has a size of 2.7 Mb and contains 2,720 genes.

溶血曼氏菌是一种与反刍动物支气管肺炎和纤维素性肺炎相关的主要细菌病原体。在此,我们报告了从肺炎绵羊肺中分离的血清型 A2 溶血曼氏菌(D95)的完整基因组序列。D95 基因组大小为 2.7 Mb,包含 2,720 个基因。
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引用次数: 0
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