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Mitophagy protects against ferroptosis 有丝分裂可防止铁蛋白沉积症
IF 17.3 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-09-12 DOI: 10.1038/s41556-024-01507-7
Petra Gross
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引用次数: 0
Solid tumour-induced systemic immunosuppression involves dichotomous myeloid–B cell interactions 实体瘤诱导的全身免疫抑制涉及二分法髓系-B 细胞相互作用
IF 17.3 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-09-12 DOI: 10.1038/s41556-024-01508-6
Xiaoxin Hao, Yichao Shen, Jun Liu, Angela Alexander, Ling Wu, Zhan Xu, Liqun Yu, Yang Gao, Fengshuo Liu, Hilda L. Chan, Che-Hsing Li, Yunfeng Ding, Weijie Zhang, David G. Edwards, Nan Chen, Azadeh Nasrazadani, Naoto T. Ueno, Bora Lim, Xiang H.-F. Zhang
Solid tumours induce systemic immunosuppression that involves myeloid and T cells. B cell-related mechanisms remain relatively understudied. Here we discover two distinct patterns of tumour-induced B cell abnormality (TiBA; TiBA-1 and TiBA-2), both associated with abnormal myelopoiesis in the bone marrow. TiBA-1 probably results from the niche competition between pre-progenitor-B cells and myeloid progenitors, leading to a global reduction in downstream B cells. TiBA-2 is characterized by systemic accumulation of a unique early B cell population, driven by interaction with excessive neutrophils. Importantly, TiBA-2-associated early B cells foster the systemic accumulation of exhaustion-like T cells. Myeloid and B cells from the peripheral blood of patients with triple-negative breast cancer recapitulate the TiBA subtypes, and the distinct TiBA profile correlates with pathologic complete responses to standard-of-care immunotherapy. This study underscores the inter-patient diversity of tumour-induced systemic changes and emphasizes the need for treatments tailored to different B and myeloid cell abnormalities. Hao, Shen and colleagues identify and characterize two distinct types of myeloid–B cell interaction that may signal solid tumour-induced immunosuppression and can correlate with complete responses to immunotherapy in patients with breast cancer.
实体瘤引起的全身免疫抑制涉及骨髓细胞和 T 细胞。与 B 细胞相关的机制研究相对较少。在这里,我们发现了两种不同的肿瘤诱导 B 细胞异常(TiBA;TiBA-1 和 TiBA-2)模式,这两种模式都与骨髓中的异常骨髓造血有关。TiBA-1 可能是由于前祖细胞-B 细胞和骨髓祖细胞之间的生态位竞争,导致下游 B 细胞全面减少。TiBA-2 的特点是,在与过多中性粒细胞相互作用的驱动下,一种独特的早期 B 细胞群在全身积聚。重要的是,与TiBA-2相关的早期B细胞会促进衰竭样T细胞的系统性积累。三阴性乳腺癌患者外周血中的骨髓细胞和B细胞再现了TiBA亚型,独特的TiBA特征与标准护理免疫疗法的病理完全反应相关。这项研究强调了肿瘤诱导的全身性变化在患者间的多样性,并强调了针对不同B细胞和骨髓细胞异常进行治疗的必要性。
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引用次数: 0
Ferroptosis disseminates afar in development 铁蛋白沉积症在发育过程中四处扩散
IF 17.3 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-09-12 DOI: 10.1038/s41556-024-01504-w
Zhe Wang
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引用次数: 0
Profiling cell death in COVID-19 pathology 剖析 COVID-19 病理学中的细胞死亡
IF 17.3 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-09-12 DOI: 10.1038/s41556-024-01505-9
Zhe Wang
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引用次数: 0
The Polycomb system sustains promoters in a deep OFF state by limiting pre-initiation complex formation to counteract transcription 多角体系统通过限制启动前复合物的形成来抵消转录,从而使启动子处于深度关闭状态
IF 17.3 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-09-11 DOI: 10.1038/s41556-024-01493-w
Aleksander T. Szczurek, Emilia Dimitrova, Jessica R. Kelley, Neil P. Blackledge, Robert J. Klose
The Polycomb system has fundamental roles in regulating gene expression during mammalian development. However, how it controls transcription to enable gene repression has remained enigmatic. Here, using rapid degron-based depletion coupled with live-cell transcription imaging and single-particle tracking, we show how the Polycomb system controls transcription in single cells. We discover that the Polycomb system is not a constitutive block to transcription but instead sustains a long-lived deep promoter OFF state, which limits the frequency with which the promoter can enter into a transcribing state. We demonstrate that Polycomb sustains this deep promoter OFF state by counteracting the binding of factors that enable early transcription pre-initiation complex formation and show that this is necessary for gene repression. Together, these important discoveries provide a rationale for how the Polycomb system controls transcription and suggests a universal mechanism that could enable the Polycomb system to constrain transcription across diverse cellular contexts. Combining degron-based depletion with live-cell transcription imaging and single-particle tracking, Szczurek et al. show that Polycomb keeps promoters in an OFF state by restricting the formation of the pre-initiation complex.
在哺乳动物的发育过程中,Polycomb 系统在调控基因表达方面发挥着重要作用。然而,它是如何控制转录以实现基因抑制的一直是个谜。在这里,我们利用基于去核糖体的快速耗竭,结合活细胞转录成像和单粒子追踪,展示了多聚核糖体系统如何在单细胞中控制转录。我们发现,Polycomb 系统并不是转录的组成性阻断,而是维持一种长效的深度启动子关闭状态,这种状态限制了启动子进入转录状态的频率。我们证明,Polycomb 通过抵消使早期转录启动前复合物形成的因子的结合来维持这种深启动子关闭状态,并证明这是基因抑制所必需的。这些重要发现为多角体系统如何控制转录提供了理论依据,并提出了一种通用机制,可使多角体系统在不同的细胞环境中限制转录。
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引用次数: 0
Ammonia-induced lysosomal and mitochondrial damage causes cell death of effector CD8+ T cells 氨诱导的溶酶体和线粒体损伤导致效应 CD8+ T 细胞死亡
IF 17.3 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-09-11 DOI: 10.1038/s41556-024-01503-x
Huafeng Zhang, Jincheng Liu, Wu Yuan, Qian Zhang, Xiao Luo, Yonggang Li, Yue’e Peng, Jingyu Feng, Xiaoyu Liu, Jie Chen, Yabo Zhou, Jiadi Lv, Nannan Zhou, Jingwei Ma, Ke Tang, Bo Huang
Ammonia is thought to be a cytotoxin and its increase in the blood impairs cell function. However, whether and how this toxin triggers cell death under pathophysiological conditions remains unclear. Here we show that ammonia induces a distinct form of cell death in effector T cells. We found that rapidly proliferating T cells use glutaminolysis to release ammonia in the mitochondria, which is then translocated to and stored in the lysosomes. Excessive ammonia accumulation increases lysosomal pH and results in the termination of lysosomal ammonia storage and ammonia reflux into mitochondria, leading to mitochondrial damage and cell death, which is characterized by lysosomal alkalization, mitochondrial swelling and impaired autophagic flux. Inhibition of glutaminolysis or blocking lysosomal alkalization prevents ammonia-induced T cell death and improves T cell-based antitumour immunotherapy. These findings identify a distinct form of cell death that differs from previously known mechanisms. Zhang, Liu and colleagues identify and characterize cell death in rapidly proliferating CD8+ T cells resulting from excessive ammonia accumulation and subsequent lysosomal dysfunction and mitochondrial damage.
氨被认为是一种细胞毒素,血液中氨的增加会损害细胞功能。然而,这种毒素是否以及如何在病理生理条件下引发细胞死亡仍不清楚。在这里,我们发现氨在效应 T 细胞中诱导了一种不同形式的细胞死亡。我们发现,快速增殖的 T 细胞利用谷氨酰胺溶解作用在线粒体中释放氨,然后将氨转运到溶酶体并储存起来。过量的氨积累会增加溶酶体的 pH 值,导致溶酶体氨储存终止和氨反流进入线粒体,从而导致线粒体损伤和细胞死亡,其特征是溶酶体碱化、线粒体肿胀和自噬通量受损。抑制谷氨酰胺溶解或阻断溶酶体碱化可防止氨诱导的 T 细胞死亡,并改善基于 T 细胞的抗肿瘤免疫疗法。这些发现确定了一种不同于以往已知机制的独特细胞死亡形式。
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引用次数: 0
Inverse blebs operate as hydraulic pumps during mouse blastocyst formation 在小鼠胚泡形成过程中,反向出血作为液压泵起作用
IF 17.3 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-09-11 DOI: 10.1038/s41556-024-01501-z
Markus F. Schliffka, Julien G. Dumortier, Diane Pelzer, Arghyadip Mukherjee, Jean-Léon Maître
During preimplantation development, mouse embryos form a fluid-filled lumen. Pressurized fluid fractures cell–cell contacts and accumulates into pockets, which coarsen into a single lumen. How the embryo controls intercellular fluid movement during coarsening is unknown. Here we report inverse blebs growing into cells at adhesive contacts. Throughout the embryo we observed hundreds of inverse blebs, each filling with intercellular fluid and retracting within a minute. Inverse blebs grow due to pressure build-up resulting from fluid accumulation and cell–cell adhesion, which locally confines fluid. Inverse blebs retract due to actomyosin contraction, practically pushing fluid within the intercellular space. Importantly, inverse blebs occur infrequently at contacts formed by multiple cells, which effectively serve as fluid sinks. Manipulation of the embryo topology reveals that without sinks inverse blebs pump fluid into one another in futile cycles. We propose that inverse blebs operate as hydraulic pumps to promote luminal coarsening, thereby constituting an instrument used by cells to control fluid movement. Schliffka et al. show that in the early mouse embryo, hemispherical intrusions, or inverse blebs, grow into cells at cell–cell adhesion sites in response to luminal fluid accumulation and pressure build-up, and may serve as pumps moving fluid into hydraulic sinks.
在胚胎植入前的发育过程中,小鼠胚胎会形成一个充满液体的管腔。加压的液体使细胞与细胞之间的接触断裂并积聚成袋,然后逐渐变粗成为一个单一的管腔。胚胎在粗化过程中如何控制细胞间液体运动尚不清楚。在这里,我们报告了在粘连接触处向细胞内生长的反向出血点。在整个胚胎中,我们观察到了数百个反向出血点,每个出血点都充满了细胞间液,并在一分钟内缩回。反向出血点的生长是由于液体积聚和细胞-细胞粘连导致的压力增加,从而在局部限制了液体。反向出血点由于肌动蛋白收缩而缩回,实际上是将液体推入细胞间隙。重要的是,反向出血点很少出现在由多个细胞形成的接触点上,这些接触点可有效充当液体汇。对胚胎拓扑结构的操作显示,如果没有汇,反向出血点就会在徒劳的循环中将液体泵入彼此。我们认为,反向出血点像液压泵一样促进管腔变粗,从而成为细胞控制液体运动的工具。
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引用次数: 0
Perturbing TET2 condensation promotes aberrant genome-wide DNA methylation and curtails leukaemia cell growth 扰乱 TET2 凝聚可促进全基因组 DNA 甲基化异常并抑制白血病细胞生长
IF 17.3 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-09-09 DOI: 10.1038/s41556-024-01496-7
Lei Guo, Tingting Hong, Yi-Tsang Lee, Xue Hu, Guokai Pan, Rongjie Zhao, Yuhan Yang, Jingwen Yang, Xiaoli Cai, Logan Rivera, Jie Liang, Rui Wang, Yaling Dou, Srikanth Kodali, Wenbo Li, Leng Han, Bruno Di Stefano, Yubin Zhou, Jia Li, Yun Huang
The ten-eleven translocation (TET) family of dioxygenases maintain stable local DNA demethylation during cell division and lineage specification. As the major catalytic product of TET enzymes, 5-hydroxymethylcytosine is selectively enriched at specific genomic regions, such as enhancers, in a tissue-dependent manner. However, the mechanisms underlying this selectivity remain unresolved. Here we unveil a low-complexity insert domain within TET2 that facilitates its biomolecular condensation with epigenetic modulators, such as UTX and MLL4. This co-condensation fosters a permissive chromatin environment for precise DNA demethylation. Disrupting low-complexity insert-mediated condensation alters the genomic binding of TET2 to cause promiscuous DNA demethylation and genome reorganization. These changes influence the expression of key genes implicated in leukaemogenesis to curtail leukaemia cell proliferation. Collectively, this study establishes the pivotal role of TET2 condensation in orchestrating precise DNA demethylation and gene transcription to support tumour cell growth. Guo, Hong et al. report that TET2 condensation maintains proper DNA demethylation at specific genomic loci, which can be targeted to alter gene expression and impair leukaemia growth.
十-十一易位(TET)二氧合酶家族在细胞分裂和品系分化过程中维持稳定的局部 DNA 去甲基化。作为 TET 酶的主要催化产物,5-羟甲基胞嘧啶以组织依赖的方式选择性地富集在特定的基因组区域,如增强子。然而,这种选择性的内在机制仍未解决。在这里,我们揭示了 TET2 中的一个低复杂性插入结构域,它能促进 TET2 与表观遗传调节剂(如 UTX 和 MLL4)的生物分子缩聚。这种共同凝结为 DNA 的精确去甲基化创造了有利的染色质环境。破坏低复杂性插入介导的缩聚会改变 TET2 的基因组结合,从而导致杂乱的 DNA 去甲基化和基因组重组。这些变化会影响与白血病发生有关的关键基因的表达,从而抑制白血病细胞的增殖。总之,这项研究证实了 TET2 冷凝在协调精确的 DNA 去甲基化和基因转录以支持肿瘤细胞生长方面的关键作用。
{"title":"Perturbing TET2 condensation promotes aberrant genome-wide DNA methylation and curtails leukaemia cell growth","authors":"Lei Guo, Tingting Hong, Yi-Tsang Lee, Xue Hu, Guokai Pan, Rongjie Zhao, Yuhan Yang, Jingwen Yang, Xiaoli Cai, Logan Rivera, Jie Liang, Rui Wang, Yaling Dou, Srikanth Kodali, Wenbo Li, Leng Han, Bruno Di Stefano, Yubin Zhou, Jia Li, Yun Huang","doi":"10.1038/s41556-024-01496-7","DOIUrl":"10.1038/s41556-024-01496-7","url":null,"abstract":"The ten-eleven translocation (TET) family of dioxygenases maintain stable local DNA demethylation during cell division and lineage specification. As the major catalytic product of TET enzymes, 5-hydroxymethylcytosine is selectively enriched at specific genomic regions, such as enhancers, in a tissue-dependent manner. However, the mechanisms underlying this selectivity remain unresolved. Here we unveil a low-complexity insert domain within TET2 that facilitates its biomolecular condensation with epigenetic modulators, such as UTX and MLL4. This co-condensation fosters a permissive chromatin environment for precise DNA demethylation. Disrupting low-complexity insert-mediated condensation alters the genomic binding of TET2 to cause promiscuous DNA demethylation and genome reorganization. These changes influence the expression of key genes implicated in leukaemogenesis to curtail leukaemia cell proliferation. Collectively, this study establishes the pivotal role of TET2 condensation in orchestrating precise DNA demethylation and gene transcription to support tumour cell growth. Guo, Hong et al. report that TET2 condensation maintains proper DNA demethylation at specific genomic loci, which can be targeted to alter gene expression and impair leukaemia growth.","PeriodicalId":18977,"journal":{"name":"Nature Cell Biology","volume":"26 12","pages":"2154-2167"},"PeriodicalIF":17.3,"publicationDate":"2024-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142158752","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A size filter at the Golgi regulates apical membrane protein sorting 高尔基体上的尺寸过滤器调节顶端膜蛋白分拣
IF 17.3 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-09-05 DOI: 10.1038/s41556-024-01500-0
Christian de Caestecker, Ian G. Macara
Despite decades of research, apical sorting of epithelial membrane proteins remains incompletely understood. We noted that apical cytoplasmic domains are smaller than those of basolateral proteins; however, the reason for this discrepancy is unknown. Here we used a synthetic biology approach to investigate whether a size barrier at the Golgi apparatus might hinder apical sorting of proteins with large cytoplasmic tails. We focused on Crb3, Ace2 and Muc1 as representative apical proteins with short cytoplasmic tails. By incorporating a streptavidin-binding peptide, these proteins can be trapped in the endoplasmic reticulum until addition of biotin, which triggers synchronous release to the Golgi and subsequent transport to the apical cortex. Strikingly, increasing the size of their cytoplasmic domains caused partial mislocalization to the basolateral cortex and significantly delayed Golgi departure. Moreover, N-glycosylation of ‘large’ Crb3 was delayed, and ‘small’ Crb3 segregated into spatially distinct Golgi regions. Biologically, Crb3 forms a complex through its cytoplasmic tail with the Pals1 protein, which could also delay departure, but although associated at the endoplasmic reticulum and Golgi, Pals1 disassociated before Crb3 departure. Notably, a non-dissociable mutant Pals1 hampered the exit of Crb3. We conclude that, unexpectedly, a size filter at the Golgi facilitates apical sorting of proteins with small cytoplasmic domains and that timely release of Pals1, to reduce cytoplasmic domain size, is essential for normal Crb3 sorting. de Caestecker and Macara study apical sorting of proteins with varying cytoplasmic tail length in epithelial cells. They propose that a size filter at the Golgi facilitates apical sorting of proteins with small cytoplasmic domains.
尽管进行了数十年的研究,但人们对上皮膜蛋白的顶端分选仍然知之甚少。我们注意到,顶端的细胞质结构域比基底侧蛋白的要小;然而,造成这种差异的原因尚不清楚。在这里,我们使用合成生物学方法来研究高尔基体的大小障碍是否会阻碍具有大胞质尾部的蛋白质的顶端分拣。我们以 Crb3、Ace2 和 Muc1 为代表的具有短细胞质尾巴的顶端蛋白。通过加入链霉亲和素结合肽,这些蛋白质可以被困在内质网中,直到加入生物素,才会被同步释放到高尔基体,随后被转运到顶端皮层。令人震惊的是,增加其胞质结构域的大小会导致部分错误定位到基底侧皮层,并显著延迟高尔基体的离开。此外,"大 "Crb3的N-糖基化被延迟,而 "小 "Crb3则分离到空间上不同的高尔基区域。在生物学上,Crb3 通过其胞质尾部与 Pals1 蛋白形成复合物,这也会延迟离体时间,但尽管 Pals1 与内质网和高尔基体有联系,它还是在 Crb3 离体前脱离了。值得注意的是,不可分离的突变体 Pals1 阻碍了 Crb3 的离开。我们的结论是,出乎意料的是,高尔基体的大小过滤器促进了具有小细胞质结构域的蛋白质的顶端分拣,而及时释放 Pals1 以减小细胞质结构域的大小对正常的 Crb3 分拣至关重要。
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引用次数: 0
Wnt-deficient and hypoxic environment orchestrates squamous reprogramming of human pancreatic ductal adenocarcinoma Wnt缺陷和缺氧环境协调人类胰腺导管腺癌的鳞状重塑
IF 17.3 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2024-09-04 DOI: 10.1038/s41556-024-01498-5
Hiroki Tamagawa, Masayuki Fujii, Kazuhiro Togasaki, Takashi Seino, Shintaro Kawasaki, Ai Takano, Kohta Toshimitsu, Sirirat Takahashi, Yuki Ohta, Mami Matano, Kenta Kawasaki, Yujiro Machida, Shigeki Sekine, Akihito Machinaga, Ken Sasai, Yuzo Kodama, Nobuyuki Kakiuchi, Seishi Ogawa, Tomonori Hirano, Hiroshi Seno, Minoru Kitago, Yuko Kitagawa, Eisuke Iwasaki, Takanori Kanai, Toshiro Sato
Human pancreatic cancer is characterized by the molecular diversity encompassing native duct-like and squamous cell-like identities, but mechanisms underlying squamous transdifferentiation have remained elusive. To comprehensively capture the molecular diversity of human pancreatic cancer, we here profiled 65 patient-derived pancreatic cancer organoid lines, including six adenosquamous carcinoma lines. H3K27me3-mediated erasure of the ductal lineage specifiers and hijacking of the TP63-driven squamous-cell programme drove squamous-cell commitment, providing survival benefit in a Wnt-deficient environment and hypoxic conditions. Gene engineering of normal pancreatic duct organoids revealed that GATA6 loss and a Wnt-deficient environment, in concert with genetic or hypoxia-mediated inactivation of KDM6A, facilitate squamous reprogramming, which in turn enhances environmental fitness. EZH2 inhibition counterbalanced the epigenetic bias and curbed the growth of adenosquamous cancer organoids. Our results demonstrate how an adversarial microenvironment dictates the molecular and histological evolution of human pancreatic cancer and provide insights into the principles and significance of lineage conversion in human cancer. Tamagawa, Fujii et al. demonstrate that squamous differentiation in human pancreatic cancer can be attributed to TP63-mediated lineage conversion and epigenetic reprogramming that depends upon a hypoxic and Wnt-defective niche.
人类胰腺癌的特点是分子多样性,包括原生导管样和鳞状细胞样特征,但鳞状细胞转分化的内在机制仍然难以捉摸。为了全面了解人类胰腺癌的分子多样性,我们在此对 65 个患者来源的胰腺癌类器官系进行了分析,其中包括 6 个腺鳞癌系。H3K27me3介导的导管系谱标志物的清除和TP63驱动的鳞状细胞计划的劫持推动了鳞状细胞的形成,在Wnt缺乏的环境和缺氧条件下提供了生存益处。正常胰腺导管器官组织的基因工程发现,GATA6缺失和Wnt缺乏环境与遗传或缺氧介导的KDM6A失活共同促进了鳞状细胞重编程,进而增强了环境适应性。抑制 EZH2 可抵消表观遗传学偏倚,抑制腺鳞癌组织细胞的生长。我们的研究结果证明了对抗性微环境是如何决定人类胰腺癌的分子和组织学演变的,并为人类癌症谱系转换的原理和意义提供了见解。
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引用次数: 0
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