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Grab Sampling or Passive Samplers? A Comparative Approach to Water Quality Monitoring. 抓取采样还是被动采样?水质监测的比较方法。
IF 4.6 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-03 DOI: 10.3390/molecules31030529
Caterina Cacciatori, Jackie Myers, Giulio Mariani, Bernd Manfred Gawlik, Vincent Pettigrove

Pesticide contamination poses significant threats to both humans and the environment, with residues frequently detected in surface waters worldwide. This study compares the effectiveness of passive samplers (POCIS and Chemcatcher) and grab sampling coupled with Stir-Bar Sorptive Extraction (SBSE) and Solid-Phase Extraction (SPE) for monitoring pesticides in surface waters. The comparative study was conducted at three sites in Victoria, Australia, representing different land uses. A total of 230 pesticides were screened, with 79 different pesticides detected overall. SBSE extracted the highest number of pesticides from grab samples, followed by SPE and passive samplers. The study highlights the complementarity of different sampling and extraction techniques in detecting a wide range of pesticides. The study also explores the suitability of these techniques for citizen science applications, emphasizing the importance of selecting appropriate methods based on specific research objectives and available resources. The findings underscore the need for a tiered approach, combining passive samplers for initial screening and grab sampling for quantitative analysis, to develop a robust monitoring strategy for protecting water quality.

农药污染对人类和环境都构成重大威胁,在世界各地的地表水中经常检测到农药残留。本研究比较了被动采样器(POCIS和Chemcatcher)和抓取采样耦合搅拌杆吸附萃取(SBSE)和固相萃取(SPE)在地表水农药监测中的有效性。比较研究在澳大利亚维多利亚州的三个地点进行,代表不同的土地用途。总共筛选了230种农药,总共检测到79种不同的农药。SBSE法从抓取样品中提取的农药残留量最高,其次是SPE和被动采样法。该研究强调了不同采样和提取技术在检测多种农药方面的互补性。该研究还探讨了这些技术在公民科学应用中的适用性,强调了根据具体研究目标和可用资源选择适当方法的重要性。研究结果强调需要采用分层方法,将被动采样器用于初始筛选和抓取采样器用于定量分析相结合,以制定保护水质的有力监测策略。
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引用次数: 0
Chemical and Enantioselective Analysis of the Leaf Essential Oil from Varronia crenata Ruiz & Pav. Growing in Ecuador. 绿叶华叶精油的化学和对映选择性分析。生长在厄瓜多尔。
IF 4.6 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-03 DOI: 10.3390/molecules31030532
Karem Cazares, Yessenia E Maldonado, Nixon Cumbicus, Gianluca Gilardoni, Omar Malagón

Essential oils from species of the genus Varronia (Boraginaceae) are recognized for their chemical diversity and biological potential; however, phytochemical information on Varronia crenata Ruiz & Pav. remains scarce, despite its wide distribution in the Andean region. The aim of this study was to provide the first chemical and enantioselective characterization of the essential oil obtained from the leaves of V. crenata growing in Ecuador. Qualitative and quantitative analyses were carried out by GC-MS and GC-FID, respectively, using two columns with stationary phases of contrasting polarity. Compounds were identified by matching linear retention indices and mass spectra to literature references and quantified by external calibration using relative response factors (RRFs) calculated for each compound based on its combustion enthalpy. The most abundant constituents (≥3.0% on average between the two columns) of the essential oil of V. crenata, both in the nonpolar and polar stationary phases, were germacrene D (18.4%), (E)-β-caryophyllene (13.3%), α-copaene (10.4%), tricyclene (9.3%), δ-cadinene (8.9%), and α-pinene (8.3%). The volatile fraction was dominated by sesquiterpenes (60.2%) and monoterpenes (22.1%), while other chemical families were present in minor proportions. The enantioselective analysis was performed on two different columns, coated with stationary phases based on β-cyclodextrins: 2,3-diacetyl-6-tert-butyl-dimethylsilyl-β-cyclodextrin and 2,3-diethyl-6-tert-butyl-dimethylsilyl-β-cyclodextrin. Nine chiral compounds were analyzed; among them, (1R,5R)-(+)-α-pinene, (1R,5R)-(+)-sabinene, and (S)-(+)-β-phellandrene were detected as enantiomerically pure, while the other metabolites presented scalemic mixtures. Overall, the high content of bioactive sesquiterpenes and the observed stereochemical complexity highlight the potential pharmaceutical and agricultural relevance of V. crenata essential oil, while also providing novel chemotaxonomic information for the genus.

龙葵属(Boraginaceae)植物精油因其化学多样性和生物潜力而得到认可;然而,在植物化学方面的信息,瓦罗妮亚crenatata Ruiz & Pav。尽管它在安第斯地区广泛分布,但仍然稀缺。本研究的目的是提供第一个化学和对映选择性表征,从厄瓜多尔生长的绿皮叶中获得的精油。分别采用气相色谱-质谱和气相色谱- fid进行定性和定量分析。通过将线性保留指数和质谱与文献相匹配来鉴定化合物,并通过基于燃烧焓计算的相对响应因子(RRFs)进行外部校准定量。在非极性固定相和极性固定相中,金针叶挥发油中含量最高的成分(两柱间平均含量≥3.0%)分别是绿烯D(18.4%)、(E)-β-石竹烯(13.3%)、α-copaene(10.4%)、三环烯(9.3%)、δ-cadinene(8.9%)和α-蒎烯(8.3%)。挥发分以倍半萜类(60.2%)和单萜类(22.1%)为主,其他化学家族也有少量存在。在两个不同的色谱柱上进行对映选择性分析,色谱柱上涂有固定相,分别为2,3-二乙酰-6-叔丁基-二甲基硅基-β-环糊精和2,3-二乙基-6-叔丁基-二甲基硅基-β-环糊精。分析了9种手性化合物;其中(1R,5R)-(+)-α-蒎烯、(1R,5R)-(+)-sabinene和(S)-(+)-β-茶树烯为对映体纯产物,其余代谢物呈鳞片混合。总的来说,高含量的生物活性倍半萜和观察到的立体化学复杂性突出了绿皮草精油潜在的药用和农业相关性,同时也为该属提供了新的化学分类信息。
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引用次数: 0
Quercetin Released Biomedical Hybrid Hydrogels Fabricated by Silk Fibroin and Sodium Alginate with Incorporation of Ag@rGO Nanosheets. 含有Ag@rGO纳米片的丝素和海藻酸钠制备槲皮素释放的生物医学混合水凝胶。
IF 4.6 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-03 DOI: 10.3390/molecules31030527
Lei Nie, Xinran Li, Benda Xing, Ling Wang

The drug-encapsulated hybrid hydrogels possessed several expected properties, including porous microstructure, conductivity, adhesive strength, antioxidant activity, antibacterial properties, and cytocompatibility, and have great potential in biomedical applications, such as skin wound hydrogel dressings and bio-adhesives. In this paper, the quercetin-loaded hybrid hydrogels (SSA-QRs) were fabricated using silk fibroin (SF), alginate, and silver-doped reduced graphene oxide (Ag@rGO) nanosheets, incorporating quercetin-encapsulated PF-127 (PF127-QR) micelles. Scanning electron microscopy (SEM) images confirmed that the fabricated hybrid hydrogels possessed an interconnected porous microstructure. The mechanical properties of hydrogels could be regulated by adjusting the content of incorporated Ag@rGO nanosheets and PF127-QR micelles. Furthermore, the obtained SSA-QR hydrogels displayed the expected swelling properties, and the swelling rates could reach 1200-1700% in 120 min, in the equilibrium state. The fabricated SSA-QR hydrogels possessed apparent conductivity and self-healing ability. In addition, SSA-QR hydrogels exhibited strong adhesive performance on the surface of different materials, including skin, metal, wood, plastic, and glass. The typical antibacterial testing using Gram-positive Staphylococcus aureus (S. aureus) and Gram-negative Escherichia coli (E. coli) confirmed the excellent antibacterial activities of SSA-QR hydrogels. Moreover, SSA-QR hydrogels displayed good antioxidant ability and intracellular ROS scavenging ability. However, the increased content of Ag@rGO nanosheets could cause a great increase in the hemolysis ratio for SSA-QR hydrogels. Fluorescent images, cell counting kit-8 (CCK-8) assay, and cell scratch testing confirmed their excellent cytocompatibility and cell pro-migration ability. The available results demonstrated a facile strategy to prepare the quercetin-loaded hydrogel for applications of wound hydrogel dressing and bio-adhesives.

该药物包封的杂化水凝胶具有多孔结构、导电性、粘接强度、抗氧化性、抗菌性和细胞相容性等多种预期性能,在皮肤伤口水凝胶敷料和生物胶粘剂等生物医学领域具有巨大的应用潜力。本文采用丝素(SF)、海藻酸盐和掺杂银的还原氧化石墨烯(Ag@rGO)纳米片,结合槲皮素包封的PF-127 (PF127-QR)胶束,制备了槲皮素负载的杂化水凝胶(SSA-QRs)。扫描电子显微镜(SEM)图像证实了制备的杂化水凝胶具有相互连接的多孔微观结构。通过调节掺入Ag@rGO纳米片和PF127-QR胶束的含量,可以调节水凝胶的力学性能。此外,所得的SSA-QR水凝胶具有预期的溶胀性能,在平衡状态下,在120min内溶胀率可达到1200 ~ 1700%。制备的SSA-QR水凝胶具有明显的导电性和自愈能力。此外,SSA-QR水凝胶在皮肤、金属、木材、塑料和玻璃等不同材料表面均表现出较强的粘附性能。采用革兰氏阳性金黄色葡萄球菌(S. aureus)和革兰氏阴性大肠杆菌(E. coli)进行典型抑菌试验,证实了SSA-QR水凝胶具有良好的抑菌活性。此外,SSA-QR水凝胶具有良好的抗氧化能力和清除细胞内ROS的能力。然而,Ag@rGO纳米片含量的增加会导致SSA-QR水凝胶溶血率的大幅增加。荧光图像、细胞计数试剂盒-8 (CCK-8)试验和细胞划痕试验证实了它们具有良好的细胞相容性和细胞促迁移能力。结果表明,槲皮素负载水凝胶可用于伤口敷料和生物胶粘剂的制备。
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引用次数: 0
Derivatives of 1-(2-Pyridyl)-3-pyrazolecarboxylic Acids as Ligands for Binding f-Elements. 结合f元素配体的1-(2-吡啶基)-3-吡唑羧酸衍生物。
IF 4.6 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-03 DOI: 10.3390/molecules31030541
Olga I Abramova, Alexey V Ivanov, Nataliya E Borisova, Victoriya A Bitanova, Konstantin A Lyssenko, Anastasiia V Kharcheva, Svetlana V Patsaeva

A series of amides of 1-(2-pyridyl)-5-arylpyrazole-3-carboxylic acids has been synthesized. Complexes of synthesized ligands with salts of 4f- and 5f-elements were obtained. The composition of the complexes in the gas phase, solution, and solid state has been studied. The luminescence parameters of europium complexes in solution have been determined.

合成了一系列1-(2-吡啶基)-5-芳基吡唑-3-羧酸酰胺。合成的配体与4f-和5f-元素盐形成配合物。研究了配合物在气相、溶液和固相的组成。测定了铕配合物在溶液中的发光参数。
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引用次数: 0
Once Upon a Time Without DMF: Greener Paths in Peptide and Organic Synthesis. 曾几何时没有DMF:肽和有机合成的绿色路径。
IF 4.6 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-03 DOI: 10.3390/molecules31030536
Antonia Scognamiglio, Elisa Magli, Giuseppe Caliendo, Elisa Perissutti, Vincenzo Santagada, Beatrice Severino

N,N-Dimethylformamide (DMF) has been a cornerstone solvent in both peptide and organic synthesis due to its excellent solubilizing properties and chemical stability. However, its use has raised significant health and environmental concerns. DMF is classified as a substance of very high concern (SVHC) by the European Chemicals Agency (ECHA) due to its reproductive toxicity and potential for skin absorption, leading to liver damage upon prolonged exposure. Consequently, restrictions on its use have been introduced, encouraging the scientific community to seek safer, more sustainable alternatives. This review provides a comprehensive analysis of the existing literature on alternative solvents to DMF, identifying current gaps or problems, and offering recommendations for future research.

N,N-二甲基甲酰胺(DMF)由于其优异的增溶性和化学稳定性,已成为多肽和有机合成的基础溶剂。然而,它的使用引起了重大的健康和环境问题。DMF被欧洲化学品管理局(ECHA)列为高度关注物质(SVHC),因为它具有生殖毒性和皮肤吸收的潜力,长期接触会导致肝脏损伤。因此,对它的使用实行了限制,鼓励科学界寻求更安全、更可持续的替代品。这篇综述提供了一个全面的分析现有文献的替代溶剂DMF,找出目前的差距或问题,并提出建议,为未来的研究。
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引用次数: 0
Structural and Biochemical Characterization of an Atypical α-Carbonic Anhydrase from the Tardigrade Ramazzottius varieornatus. 一种非典型α-碳酸酐酶的结构与生化特性研究。
IF 4.6 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-03 DOI: 10.3390/molecules31030538
Byung Hoon Jo

The tardigrade Ramazzottius varieornatus exhibits extraordinary resilience to extreme environmental stresses, yet the functional diversity of its proteome remains largely unexplored. In this study, the structural and biochemical characterization of RvCA5, an atypical α-carbonic anhydrase (CA) identified in R. varieornatus, is presented. Expression analysis in E. coli revealed the spontaneous formation of a truncated RvCA5 species, which was confirmed to be unrelated to signal peptide cleavage. RvCA5 exhibited distinct structural features, including extended intrinsically disordered regions (IDRs) at both termini. Unlike canonical α-CAs, RvCA5 exhibited negligible CO2 hydration activity, which was partially enhanced by the removal of the N-terminal IDR, suggesting that this region acts as a dynamic entropic barrier hindering substrate diffusion. RvCA5 possesses multiple surface-exposed reactive cysteine residues, resembling the redox-sensing human CA 3. Notably, consistent with a predicted nuclear localization signal, in silico modeling predicted that RvCA5 can bind DNA via a positively charged patch near the C-terminal IDR. The DNA-binding capability of RvCA5 was experimentally demonstrated by electrophoretic mobility shift assays. Collectively, these findings suggest that RvCA5 potentially functions as a redox-responsive transcriptional regulator.

缓步动物Ramazzottius varieornatus对极端环境压力表现出非凡的适应能力,但其蛋白质组的功能多样性仍未被广泛探索。本文报道了一种非典型α-碳酸酐酶(CA) RvCA5的结构和生化特性。在大肠杆菌中的表达分析显示,一个截断的RvCA5物种自发形成,被证实与信号肽切割无关。RvCA5表现出明显的结构特征,包括在两端延伸的内在无序区(IDRs)。与典型α-CAs不同的是,RvCA5的CO2水化活性可以忽略不计,这部分是由于去除n端IDR而增强的,这表明该区域是阻碍底物扩散的动态熵障。RvCA5具有多个表面暴露的活性半胱氨酸残基,类似于氧化还原感应的人类ca3。值得注意的是,与预测的核定位信号一致,计算机模型预测RvCA5可以通过靠近c端IDR的带正电的贴片结合DNA。RvCA5的dna结合能力通过电泳迁移位移实验得到验证。总的来说,这些发现表明RvCA5可能作为氧化还原反应性转录调节因子发挥作用。
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引用次数: 0
Consecutive Recovery of Bioactive Substances from Desmodium canadense at Different Plant Vegetation Phases by Green Extraction with Supercritical CO2 and Increasing Polarity Pressurized Liquids. 超临界CO2和增加极性的加压液体绿色萃取法在不同植物生长阶段连续回收加拿大铁蒺藜中的生物活性物质
IF 4.6 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-03 DOI: 10.3390/molecules31030528
Sana Abbas, Milda Pukalskienė, Laura Jūrienė, Ona Ragažinskienė, Petras Rimantas Venskutonis

This study used high-pressure extraction to obtain antioxidant-rich fractions from Desmodium canadense leaves harvested at five vegetation phases (intensive growing to end of blooming) and to evaluate their antioxidant activity and phytochemical profile. Supercritical CO2 extraction recovered lipophilic compounds, with the highest yield at massive flowering. The remaining plant material was fractionated by pressurized liquid extraction (PLE) using acetone, ethanol, and water; the highest PLE yield was achieved with water (16.54 g/100 g DW) at the bud formation stage. Antioxidant capacity was measured using total phenolic content (TPC) and ABTS•+, CUPRAC, and ORAC assays. Overall, ethanol PLE extracts showed the strongest antioxidant properties: maximum TPC (282.1 mg GAE/gE) and ABTS•+ (1010 mg TE/gE) at massive flowering, and highest CUPRAC (853.3 mg TE/gE) and ORAC (1882 mg TE/gE) at bud formation. UPLC-Q-TOF-MS/MS profiling identified 37 compounds, mainly C-glycosyl flavones, flavonol O-glycosides, hydroxycinnamic acid derivatives, and low molecular weight organic acids. Water extracts were rich in low molecular weight organic acids, while acetone and ethanol extracts contained the highest flavonoid levels. Citric acid and vitexin were the most abundant compounds. The findings indicate that D. canadense leaves, especially harvested at budding through massive flowering, are a promising source of flavonoid-rich antioxidant extracts for nutraceutical and functional food applications.

本研究采用高压萃取法从五个生长阶段(集约生长至开花结束)的加拿大铁蒺藜叶片中提取了富含抗氧化剂的部分,并对其抗氧化活性和植物化学特征进行了评价。超临界CO2萃取可回收亲脂性化合物,在大量开花时产量最高。剩余的植物物质用丙酮、乙醇和水加压液体萃取(PLE)进行分馏;在芽形成阶段,水处理产量最高(16.54 g/100 g DW)。采用总酚含量(TPC)、ABTS•+、CUPRAC和ORAC测定抗氧化能力。总体而言,乙醇提取物具有最强的抗氧化性能,在大量开花时TPC (282.1 mg GAE/gE)和ABTS•+ (1010 mg TE/gE)最高,芽形成时CUPRAC (853.3 mg TE/gE)和ORAC (1882 mg TE/gE)最高。UPLC-Q-TOF-MS/MS分析鉴定了37种化合物,主要是c -糖基黄酮、黄酮醇o -糖苷、羟基肉桂酸衍生物和低分子量有机酸。水提取物富含低分子量有机酸,丙酮和乙醇提取物类黄酮含量最高。其中柠檬酸和牡荆素含量最高。研究结果表明,加拿大杜鹃的叶片,特别是在出芽到大量开花期间收获的叶片,是富含类黄酮的抗氧化提取物的一个有希望的营养保健和功能食品来源。
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引用次数: 0
Natural Alkaloids as Antiviral Agents Against RNA Viruses: A Comprehensive and Mechanistic Review. 天然生物碱作为RNA病毒抗病毒药物的研究进展
IF 4.6 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-03 DOI: 10.3390/molecules31030539
Kristi Leka, Lúcia Mamede, Elyn Vandeberg, Mutien-Marie Garigliany, Allison Ledoux

RNA viruses pose a persistent global threat due to their high mutation rates, zoonotic potential, and rapid adaptability. Emergence events have risen steadily, as demonstrated by major outbreaks caused by Influenza A, Ebola, Zika, and Chikungunya viruses, followed by the coronavirus epidemics of Severe Acute Respiratory Syndrome coronavirus (SARS-CoV-1) and Middle East Respiratory Syndrome Coronavirus (MERS-CoV) and culminating in the COVID-19 pandemic. These characteristics frequently compromise the durability of existing vaccines and antiviral therapies, highlighting the urgent need for new antiviral agents. Alkaloids, a structurally diverse class of nitrogen-containing natural compounds, have gained attention for their ability to interfere with multiple stages of the viral life cycle, including entry, replication, protein synthesis, and host immune modulation. To our knowledge, this review compiles all currently reported alkaloids with antiviral activity against RNA viruses and summarizes their proposed mechanisms of action, distinguishing evidence from in vitro, in vivo, and in silico studies. Quaternary alkaloids are discussed separately because their permanent ionic charge enables distinctive interactions with membranes and host pathways. Although many findings are promising, clinical translation remains limited by incomplete mechanistic validation, scarce in vivo data, suboptimal bioavailability, narrow therapeutic windows, and inconsistent experimental methodologies. To advance the field, future research should prioritize RT-qPCR-based antiviral evaluation to accurately quantify viral replication, incorporate mechanistic assays to clarify modes of action, apply structure-activity relationship (SAR) approaches for rational optimization, and expand in vivo pharmacokinetic and efficacy studies to assess therapeutic feasibility. Overall, alkaloids represent a promising yet underdeveloped reservoir for next-generation antiviral discovery against rapidly evolving RNA viruses.

RNA病毒由于其高突变率、人畜共患潜力和快速适应性,对全球构成持续威胁。甲型流感、埃博拉病毒、寨卡病毒和基孔肯雅病毒引起的重大疫情,随后是严重急性呼吸综合征冠状病毒(SARS-CoV-1)和中东呼吸综合征冠状病毒(MERS-CoV)的冠状病毒流行,并最终导致COVID-19大流行,证明了突发事件稳步上升。这些特点经常影响现有疫苗和抗病毒疗法的持久性,因此迫切需要新的抗病毒药物。生物碱是一类结构多样的含氮天然化合物,因其能够干扰病毒生命周期的多个阶段而受到关注,包括进入、复制、蛋白质合成和宿主免疫调节。据我们所知,本综述汇编了目前报道的所有具有抗病毒RNA病毒活性的生物碱,并总结了它们的作用机制,区分了体外、体内和计算机研究的证据。第四季生物碱是单独讨论的,因为它们的永久离子电荷能够与膜和宿主途径进行独特的相互作用。尽管许多发现很有希望,但临床翻译仍然受到不完整的机制验证、体内数据缺乏、次优生物利用度、狭窄的治疗窗口和不一致的实验方法的限制。为了进一步推进该领域的研究,未来的研究应优先考虑基于rt - qpcr的抗病毒评估,以准确量化病毒复制,结合机制分析阐明作用模式,应用构效关系(SAR)方法进行合理优化,并扩大体内药代动力学和疗效研究,以评估治疗可行性。总的来说,生物碱代表了一个有希望但尚未开发的储层,用于发现下一代抗病毒药物,以对抗快速进化的RNA病毒。
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引用次数: 0
Capturing Carbohydrate Conformations and Hydration Interactions with a Polarizable Bond Dipole Potential. 捕获碳水化合物构象和水合作用与一个可极化键偶极子势。
IF 4.6 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-03 DOI: 10.3390/molecules31030533
Meng-Yao Bai, Xiao-Han Zheng, Shan-Shan Gao, Xiao-Nan Jiang, Jia-Yi Zhu, Qiang Hao, Li-Dong Gong, Lei Wang, Chang-Sheng Wang

The accurate modeling of carbohydrates is challenged by conformational flexibility, hydration, and many-body electrostatics. In this work, a polarizable bond dipole potential for carbohydrates (PBDPC25) is presented, in which C-O, O-H, and C-H bonds are represented as intrinsically polarizable dipoles. Electrostatic interactions are described through bond dipole coupling, with an orbital overlap contribution introduced to account for hydrogen bonding. For carbohydrate monomers, PBDPC25 reproduces conformational energies with a root-mean-square error (RMSE) of 2.13 kcal/mol. This accuracy exceeds that of GLYCAM06 (2.87 kcal/mol) and CHARMM36 (3.74 kcal/mol). It is also slightly better than the polarizable AMOEBA force field (2.82 kcal/mol). Optimized geometries are maintained within 0.15 Å of benchmark reference structures. This level of agreement is comparable to GLYCAM06 (0.21 Å) and close to CHARMM36 and AMOEBA (both 0.14 Å). Molecular dipole moments show excellent agreement with the reference data. Correlation coefficients exceed R2 > 0.98. For carbohydrate-water clusters, hydration energies, including many-body contributions, are predicted with an RMSE of 3.50 kcal/mol. This represents a substantial improvement over GLYCAM06, CHARMM36, and AMOEBA. These results demonstrate that PBDPC25 provides a reliable framework for modeling carbohydrate conformations and local hydration effects.

碳水化合物的精确建模受到构象柔韧性、水合作用和多体静电的挑战。在这项工作中,提出了碳水化合物的极化键偶极子势(PBDPC25),其中C-O, O-H和C-H键表示为本质极化偶极子。静电相互作用通过键偶极子耦合描述,引入轨道重叠贡献来解释氢键。对于碳水化合物单体,PBDPC25再现的构象能均方根误差(RMSE)为2.13 kcal/mol。该精度超过GLYCAM06 (2.87 kcal/mol)和CHARMM36 (3.74 kcal/mol)。它也略优于极化变形虫力场(2.82 kcal/mol)。优化的几何形状保持在基准参考结构的0.15 Å范围内。这一一致性水平与GLYCAM06 (0.21 Å)相当,接近CHARMM36和AMOEBA(均为0.14 Å)。分子偶极矩与参考数据非常吻合。相关系数大于R2 > 0.98。对于碳水化合物-水簇,水合能(包括多体贡献)的RMSE预测值为3.50 kcal/mol。这比GLYCAM06、CHARMM36和AMOEBA有了很大的改进。这些结果表明,PBDPC25为模拟碳水化合物构象和局部水化效应提供了可靠的框架。
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引用次数: 0
Valorization of Lavender Agro-Waste into Functional Carbon Materials via Carbonization and Zn2+ Modification. 薰衣草农业废弃物经炭化和Zn2+改性转化为功能碳材料的研究
IF 4.6 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-02-03 DOI: 10.3390/molecules31030540
Ognyan Sandov, Lyudmila Krasteva, Iliyana Naydenova, Ivan Kralov, Georgi Todorov, Tsvetelina Petrova

This paper proposes a valorization approach for solid lavender residue, a by-product of the essential oil industry. The biomass residue was carbonized at atmospheric pressure and two temperatures (450 °C and 650 °C), followed by solvothermal modification with zinc ions (Zn2+, 3 and 5 mmol). The effects of temperature and Zn2+ incorporation on the elemental composition and morphology of the resulting biochar were examined using X-ray Fluorescence (XRF), Fourier Transform Infrared (FTIR) spectroscopy, and Scanning Electron Microscopy/Energy-Dispersive X-ray Spectroscopy (SEM/EDS) analyses. The applied Zn2+ modification was effective at both concentrations for the biochar obtained at both carbonization temperatures. However, a more uniform metal ion distribution was observed at 3 mmol, while at 5 mmol, a partial particle agglomeration occurred. Progressive degradation of the O-H, C=O, and C-O groups with increasing temperature and the presence of Zn-O-related interactions was observed. The results demonstrated consistent and reproducible trends, suggesting that controlled carbonization combined with Zn2+ incorporation can convert lavender residues into modified carbonaceous materials.

本文提出了一种对精油工业副产品薰衣草固体残渣进行增值处理的方法。在常压450℃和650℃两种温度下对生物质残渣进行炭化处理,然后用Zn2+、3和5 mmol锌离子进行溶剂热改性。采用x射线荧光(XRF)、傅里叶变换红外(FTIR)光谱和扫描电镜/能量色散x射线能谱(SEM/EDS)分析了温度和Zn2+掺入对所得生物炭元素组成和形貌的影响。Zn2+改性对两种炭化温度下的生物炭均有效。而在3 mmol时,金属离子分布较为均匀,而在5 mmol时,出现了部分颗粒团聚。观察到O- h、C=O和C-O基团随着温度升高和zn -O相关相互作用的存在而逐渐降解。结果表明,控制炭化结合Zn2+掺入可以将薰衣草渣转化为改性碳质材料。
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