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TaGPAT6 enhances salt tolerance in wheat by synthesizing cutin and suberin monomers to form a diffusion barrier. TaGPAT6 通过合成角质素和单宁单体来形成扩散屏障,从而增强小麦的耐盐性。
IF 9.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-27 DOI: 10.1111/jipb.13808
Wenlong Wang, Menghan Chi, Shupeng Liu, Ying Zhang, Jiawang Song, Guangmin Xia, Shuwei Liu

One mechanism plants use to tolerate high salinity is the deposition of cutin and suberin to form apoplastic barriers that limit the influx of ions. However, the mechanism underlying barrier formation under salt stress is unclear. Here, we characterized the glycerol-3-phosphate acyltransferase (GPAT) family gene TaGPAT6, encoding a protein involved in cutin and suberin biosynthesis for apoplastic barrier formation in wheat (Triticum aestivum). TaGPAT6 has both acyltransferase and phosphatase activities, which are responsible for the synthesis of sn-2-monoacylglycerol (sn-2 MAG), the precursor of cutin and suberin. Overexpressing TaGPAT6 promoted the deposition of cutin and suberin in the seed coat and the outside layers of root tip cells and enhanced salt tolerance by reducing sodium ion accumulation within cells. By contrast, TaGPAT6 knockout mutants showed increased sensitivity to salt stress due to reduced cutin and suberin deposition and enhanced sodium ion accumulation. Yeast-one-hybrid and electrophoretic mobility shift assays identified TaABI5 as the upstream regulator of TaGPAT6. TaABI5 knockout mutants showed suppressed expression of TaGPAT6 and decreased barrier formation in the seed coat. These results indicate that TaGPAT6 is involved in cutin and suberin biosynthesis and the resulting formation of an apoplastic barrier that enhances salt tolerance in wheat.

植物耐受高盐度的机制之一是沉积角质素和单宁,以形成限制离子流入的凋落物屏障。然而,盐胁迫下屏障形成的机制尚不清楚。在此,我们对甘油-3-磷酸酰基转移酶(GPAT)家族基因 TaGPAT6 进行了鉴定,该基因编码的蛋白质参与了小麦(Triticum aestivum)中角质素和单宁的生物合成,以形成凋落物屏障。TaGPAT6 具有酰基转移酶和磷酸酶活性,负责合成角质素和单宁酸的前体--sn-2-单酰基甘油(sn-2 MAG)。过表达 TaGPAT6 可促进角质素和单宁在种皮和根尖细胞外层的沉积,并通过减少细胞内钠离子的积累来提高耐盐性。相比之下,TaGPAT6 基因敲除突变体对盐胁迫的敏感性增加,原因是角质和小胶皮沉积减少,钠离子积累增加。酵母一杂交和电泳迁移测定确定了 TaABI5 是 TaGPAT6 的上游调节因子。TaABI5 基因敲除突变体显示 TaGPAT6 的表达受到抑制,种皮中屏障的形成减少。这些结果表明,TaGPAT6 参与了角质素和单宁的生物合成以及由此形成的凋落物屏障,从而增强了小麦的耐盐性。
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引用次数: 0
How did the amphibious Eleocharis vivipara acquire its C3-C4 photosynthetic plasticity? 两栖动物 Eleocharis vivipara 是如何获得 C3-C4 光合可塑性的?
IF 9.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-27 DOI: 10.1111/jipb.13813
Guillaume Besnard
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引用次数: 0
Issue information page 发行信息页面
IF 9.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-22 DOI: 10.1111/jipb.13530
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引用次数: 0
Cover Image: 封面图片:
IF 9.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-22 DOI: 10.1111/jipb.13531

Tea-oil pollen toxic to honeybee larvae: When honeybees forage on the flowers of Camellia oleifera, a widely planted oilseed crop, their larvae die, but what kills the larvae remains controversial. Using bagging and caging studies, the authors show that birds effectively pollinate C. oleifera flowers. In contrast to the hypothesis of nectar toxicity, Zhang et al. (pages 2313-2316) propose that C. oleifera may have evolved toxic pollen to limit overexploitation of its pollen by bees. Toxicity tests indicated that C. oleifera pollen harmed honeybee larvae significantly more than pollen from Brassica napus, another oilseed crop, and C. oleifera pollen contains the insecticidal compound theasaponin. The cover shows simultaneous pollen presentation in a C. oleifera flower.

茶油花粉对蜜蜂幼虫有毒:当蜜蜂在油茶(一种广泛种植的油料作物)的花朵上觅食时,它们的幼虫会死亡,但杀死幼虫的原因仍存在争议。作者利用套袋和笼养研究表明,鸟类能有效地为油茶花授粉。与花蜜毒性的假说相反,Zhang 等人(第 2313-2316 页)提出,油菜可能已经进化出有毒花粉,以限制蜜蜂对其花粉的过度开发。毒性测试表明,油菜花粉对蜜蜂幼虫的伤害明显高于另一种油料作物甘蓝(Brassica napus)的花粉,而且油菜花粉含有杀虫化合物油菜素(theasaponin)。封面显示的是油菜花中同时出现的花粉。
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引用次数: 0
A resurfaced sensor NLR confers new recognition specificity to non-MAX effectors. 重新浮现的传感器 NLR 赋予非 MAX 效应器新的识别特异性。
IF 9.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-19 DOI: 10.1111/jipb.13805
Tongtong Zhu, Xuefeng Wu, Guixin Yuan, Dongli Wang, Vijai Bhadauria, You-Liang Peng, Junfeng Liu, Xin Zhang
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引用次数: 0
New perspective on pollen toxicity in Camellia oleifera 油茶花粉毒性的新视角。
IF 9.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-11 DOI: 10.1111/jipb.13803
Bin Yuan, Xiao-ming Fan, Fu-liang Hu, Yi-bo Luo

Exploring pollen chemical defenses in the economically important plant Camellia oleifera and examining their effects on honeybee flower-visiting behavior improves the understanding of the ecological functions of pollen and informs efforts to manage honeybees to bolster C. oleifera production.

探索具有重要经济价值的植物油茶中的花粉化学防御作用,并研究其对蜜蜂访花行为的影响,可以提高对花粉生态功能的认识,并为管理蜜蜂以提高油茶产量提供信息。
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引用次数: 0
The OsMAPK5–OsWRKY72 module negatively regulates grain length and grain weight in rice OsMAPK5-OsWRKY72 模块负向调节水稻的粒长和粒重。
IF 9.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-30 DOI: 10.1111/jipb.13786
Fuxiang Wang, Jiexin Lin, Fan Yang, Xiaofeng Chen, Yiyi Liu, Lingnan Yan, Jing Chen, Zonghua Wang, Huaan Xie, Jianfu Zhang, Huibin Xu, Songbiao Chen

Grain size and grain weight are important determinants for grain yield. In this study, we identify a novel OsMAPK5–OsWRKY72 module that negatively regulates grain length and grain weight in rice. We found that loss-of-function of OsMAPK5 leads to larger cell size of the rice spikelet hulls and a significant increase in both grain length and grain weight in an indica variety Minghui 86 (MH86). OsMAPK5 interacts with OsMAPKK3/4/5 and OsWRKY72 and phosphorylates OsWRKY72 at T86 and S88. Similar to the osmapk5 MH86 mutants, the oswrky72 knockout MH86 mutants exhibited larger size of spikelet hull cells and increased grain length and grain weight, whereas the OsWRKY72-overexpression MH86 plants showed opposite phenotypes. OsWRKY72 targets the W-box motifs in the promoter of OsARF6, an auxin response factor involved in auxin signaling. Dual-luciferase reporter assays demonstrated that OsWRKY72 activates OsARF6 expression. The activation effect of the phosphorylation-mimicking OsWRKY72T86D/S88D on OsARF6 expression was significantly enhanced, whereas the effects of the OsWRKY72 phosphorylation-null mutants were significantly reduced. In addition, auxin levels in young panicles of the osmapk5 and oswrky72 mutants were significantly higher than that in the wild-type MH86. Collectively, our study uncovered novel connections of the OsMAPKK3/4/5-OsMAPK5-mediated MAPK signaling, OsWRKY72-mediated transcription regulation, and OsARF6-mediated auxin signaling pathways in regulating grain length and grain weight in an indica-type rice, providing promising targets for molecular breeding of rice varieties with high yield and quality.

谷粒大小和谷粒重量是谷物产量的重要决定因素。本研究发现了一个新的 OsMAPK5-OsWRKY72 模块,该模块对水稻的粒长和粒重具有负向调节作用。我们发现,在籼稻品种明恢 86(MH86)中,OsMAPK5 的功能缺失会导致小穗谷壳细胞体积增大,谷粒长度和谷粒重量显著增加。OsMAPK5 与 OsMAPKK3/4/5 和 OsWRKY72 相互作用,并使 OsWRKY72 在 T86 和 S88 处磷酸化。与osmapk5 MH86突变体相似,oswrky72敲除MH86突变体表现出更大的穗壳细胞尺寸以及更长的谷粒长度和谷粒重量,而 OsWRKY72高表达MH86植株则表现出相反的表型。OsWRKY72 靶向 OsARF6 启动子中的 W-box motifs,OsARF6 是一种参与植物生长素信号转导的植物生长素反应因子。双荧光素酶报告实验表明,OsWRKY72 能激活 OsARF6 的表达。磷酸化模拟的 OsWRKY72T86D/S88D 对 OsARF6 表达的激活作用明显增强,而 OsWRKY72 磷酸化缺失突变体的作用则明显减弱。此外,osmapk5和oswrky72突变体幼小圆锥花序中的辅素水平明显高于野生型MH86。总之,我们的研究揭示了OsMAPKK3/4/5-OsMAPK5介导的MAPK信号转导、OsWRKY72介导的转录调控和OsARF6介导的辅素信号转导途径在调控籼型水稻的粒长和粒重中的新联系,为高产优质水稻品种的分子育种提供了前景广阔的目标。
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引用次数: 0
More than flowering: CONSTANS plays multifaceted roles in plant development and stress responses. 不仅仅是开花CONSTANS 在植物发育和应激反应中发挥着多方面的作用。
IF 9.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-28 DOI: 10.1111/jipb.13798
Bin Yu, Yilong Hu, Xingliang Hou

Plants have evolved a remarkable ability to sense and respond to changes in photoperiod, allowing adjustments to their growth and development based on seasonal and environmental cues. The floral transition is a pivotal stage in plant growth and development, signifying a shift from vegetative to reproductive growth. CONSTANS (CO), a central photoperiodic response factor conserved in various plants, mediates day-length signals to control the floral transition, although its mechanisms of action vary among plants with different day-length requirements. In addition, recent studies have uncovered roles for CO in organ development and stress responses. These pleiotropic roles in model plants and crops make CO a potentially fruitful target for molecular breeding aimed at modifying crop agronomic traits. This review systematically traces research on CO, from its discovery and functional studies to the exploration of its regulatory mechanisms and newly discovered functions, providing important insight into the roles of CO and laying a foundation for future research.

植物进化出了感知和响应光周期变化的卓越能力,从而能够根据季节和环境线索调整其生长和发育。花期过渡是植物生长和发育的关键阶段,标志着植物从无性生殖向生殖生长的转变。CONSTANS(CO)是一种在多种植物中保留下来的中央光周期反应因子,它介导昼长信号以控制花期转换,但其作用机制在不同昼长要求的植物中各不相同。此外,最近的研究还发现了 CO 在器官发育和胁迫反应中的作用。CO在模式植物和作物中的这些多效作用使其成为分子育种的一个潜在目标,旨在改变作物的农艺性状。这篇综述系统地回顾了对 CO 的研究,从 CO 的发现、功能研究到其调控机制的探索以及新发现的功能,为人们深入了解 CO 的作用提供了重要依据,并为未来的研究奠定了基础。
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引用次数: 0
Big data and artificial intelligence-aided crop breeding: Progress and prospects. 大数据和人工智能辅助作物育种:进展与前景。
IF 9.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-28 DOI: 10.1111/jipb.13791
Wanchao Zhu, Weifu Li, Hongwei Zhang, Lin Li

The past decade has witnessed rapid developments in gene discovery, biological big data (BBD), artificial intelligence (AI)-aided technologies, and molecular breeding. These advancements are expected to accelerate crop breeding under the pressure of increasing demands for food. Here, we first summarize current breeding methods and discuss the need for new ways to support breeding efforts. Then, we review how to combine BBD and AI technologies for genetic dissection, exploring functional genes, predicting regulatory elements and functional domains, and phenotypic prediction. Finally, we propose the concept of intelligent precision design breeding (IPDB) driven by AI technology and offer ideas about how to implement IPDB. We hope that IPDB will enhance the predictability, efficiency, and cost of crop breeding compared with current technologies. As an example of IPDB, we explore the possibilities offered by CropGPT, which combines biological techniques, bioinformatics, and breeding art from breeders, and presents an open, shareable, and cooperative breeding system. IPDB provides integrated services and communication platforms for biologists, bioinformatics experts, germplasm resource specialists, breeders, dealers, and farmers, and should be well suited for future breeding.

过去十年见证了基因发现、生物大数据(BBD)、人工智能(AI)辅助技术和分子育种的快速发展。在粮食需求不断增长的压力下,这些进步有望加速作物育种。在此,我们首先总结了当前的育种方法,并讨论了支持育种工作的新方法的必要性。然后,我们回顾了如何结合 BBD 和人工智能技术进行基因剖析、探索功能基因、预测调控元件和功能域以及表型预测。最后,我们提出了由人工智能技术驱动的智能精准设计育种(IPDB)概念,并就如何实施 IPDB 提出了想法。与现有技术相比,我们希望 IPDB 能够提高作物育种的可预测性、效率和成本。作为 IPDB 的一个范例,我们探讨了 CropGPT 提供的可能性,它结合了生物技术、生物信息学和育种家的育种艺术,呈现了一个开放、可共享和合作的育种系统。IPDB 为生物学家、生物信息学专家、种质资源专家、育种家、经销商和农民提供了综合服务和交流平台,非常适合未来的育种工作。
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引用次数: 0
Haplotype-resolved genome of a heterozygous wild peach reveals the PdaWRKY4-PdaCYP716A1 module mediates resistance to aphids by regulating betulin biosynthesis 杂合野生桃的单倍型基因组显示,PdaWRKY4-PdaCYP716A1模块通过调节甜菜素的生物合成来介导对蚜虫的抗性。
IF 9.3 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-25 DOI: 10.1111/jipb.13782
Jun-Xiu Wang, Yong Li, Xin-Wei Wang, Ke Cao, Chang-Wen Chen, Jin-Long Wu, Wei-Chao Fang, Geng-Rui Zhu, Xue-Jia Chen, Dan-Dan Guo, Jiao Wang, Ya-Lin Zhao, Jia-Qi Fan, Su-Ning Liu, Wen-Qing Li, Hang-Ling Bie, Qiang Xu, Li-Rong Wang

Wild species of domesticated crops provide valuable genetic resources for resistance breeding. Prunus davidiana, a wild relative of peach with high heterozygosity and diverse stress tolerance, exhibits high resistance against aphids. However, the highly heterozygous genome of P. davidiana makes determining the underlying factors influencing resistance traits challenging. Here, we present the 501.7 Mb haplotype-resolved genome assembly of P. davidiana. Genomic comparisons of the two haplotypes revealed 18,152 structural variations, 2,699 Pda_hap1-specific and 2,702 Pda_hap2-specific genes, and 1,118 allele-specific expressed genes. Genome composition indicated 4.1% of the P. davidiana genome was non-peach origin, out of which 94.5% was derived from almond. Based on the haplotype genome, the aphid resistance quantitative trait locus (QTL) was mapped at the end of Pda03. From the aphid resistance QTL, PdaWRKY4 was identified as the major dominant gene, with a 9-bp deletion in its promoter of the resistant phenotype. Specifically, PdaWRKY4 regulates aphid resistance by promoting PdaCYP716A1-mediated anti-aphid metabolite betulin biosynthesis. Moreover, we employed a genome design to develop a breeding workflow for rapidly and precisely producing aphid-resistant peaches. In conclusion, this study identifies a novel aphid resistance gene and provides insights into genome design for the development of resistant fruit cultivars.

驯化作物的野生物种为抗性育种提供了宝贵的遗传资源。Prunus davidiana 是桃的野生近缘种,具有高杂合度和多种抗逆性,对蚜虫表现出很强的抗性。然而,P. davidiana 基因组的高度杂合性使得确定影响抗性性状的潜在因素具有挑战性。在这里,我们展示了 501.7 Mb 单倍型解析的 P. davidiana 基因组组装。两个单倍型的基因组比较发现了 18,152 个结构变异、2,699 个 Pda_hap1 特异基因和 2,702 个 Pda_hap2 特异基因以及 1,118 个等位基因特异表达基因。基因组组成表明,4.1% 的 P. davidiana 基因组来自非桃树,其中 94.5% 来自杏树。根据单倍型基因组,抗蚜虫数量性状基因座(QTL)被绘制在 Pda03 的末端。从蚜虫抗性 QTL 中发现,PdaWRKY4 是主要的显性基因,其启动子上的 9-bp 缺失会导致抗性表型。具体来说,PdaWRKY4 通过促进 PdaCYP716A1 介导的抗蚜虫代谢物 betulin 的生物合成来调节蚜虫抗性。此外,我们还利用基因组设计开发了一套育种流程,用于快速、精确地培育抗蚜虫桃子。总之,本研究发现了一种新型抗蚜虫基因,并为抗性水果栽培品种的开发提供了基因组设计方面的启示。
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引用次数: 0
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Journal of Integrative Plant Biology
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