首页 > 最新文献

NPJ Parkinson's Disease最新文献

英文 中文
Classifying the risk of cognitive impairment in Parkinson's disease using serum bile acid profiles and machine learning. 利用血清胆汁酸谱和机器学习对帕金森病认知障碍风险进行分类
IF 8.7 1区 医学 Q1 NEUROSCIENCES Pub Date : 2025-12-08 DOI: 10.1038/s41531-025-01229-z
Tong Shen,Can Cui,Ruiqi Liu,Xin Yin,Jie Zu,Wei Zhang,Liguo Dong,Chuanying Xu,Hailong Lu,Guiyun Cui,Xuebin Qu,Chu Zhang
Cognitive impairment (CI) is a common and early non-motor manifestation of Parkinson's disease (PD), yet its biochemical basis remains poorly understood. Given the emerging link between bile acids (BAs) and neurodegeneration, we investigated whether serum BA profiles differ by cognitive status in PD and whether they can classify CI. A total of 363 participants were enrolled, including 63 healthy controls, 154 PD patients with normal cognition, and 146 with CI. Serum BA concentrations were quantified by ultra-performance liquid chromatography-tandem mass spectrometry, and multivariate as well as machine learning analyses were applied. Compared with cognitively normal PD patients, those with CI exhibited distinct BA alterations, characterized by elevated deoxycholic and cholic acids and reduced glyco- and tauro-conjugated species. Deoxycholic acid showed the strongest negative correlations with cognitive scores. Machine learning models based on combined BA profiles, particularly the random forest classifier, achieved robust discrimination between PD-CI and PD-NC groups (AUC up to 0.90). These findings indicate that BA dysregulation is closely linked to cognitive impairment in PD and may serve as a promising metabolic biomarker for early detection. Clinical trial number. Not applicable.
认知障碍(CI)是帕金森病(PD)常见的早期非运动表现,但其生化基础尚不清楚。鉴于胆汁酸(BAs)与神经退行性变之间的联系,我们研究了PD患者的血清BA谱是否因认知状态而异,以及它们是否可以分类CI。共纳入363名参与者,包括63名健康对照,154名认知正常的PD患者和146名CI患者。采用超高效液相色谱-串联质谱法定量血清BA浓度,并应用多元分析和机器学习分析。与认知正常的PD患者相比,CI患者表现出明显的BA改变,其特征是脱氧胆酸和胆酸升高,糖和牛磺酸缀合物减少。脱氧胆酸与认知得分呈最强负相关。基于组合BA配置文件的机器学习模型,特别是随机森林分类器,实现了PD-CI和PD-NC组之间的鲁棒区分(AUC高达0.90)。这些发现表明,BA失调与PD患者的认知障碍密切相关,可能作为一种有希望的早期检测代谢生物标志物。临床试验编号。不适用。
{"title":"Classifying the risk of cognitive impairment in Parkinson's disease using serum bile acid profiles and machine learning.","authors":"Tong Shen,Can Cui,Ruiqi Liu,Xin Yin,Jie Zu,Wei Zhang,Liguo Dong,Chuanying Xu,Hailong Lu,Guiyun Cui,Xuebin Qu,Chu Zhang","doi":"10.1038/s41531-025-01229-z","DOIUrl":"https://doi.org/10.1038/s41531-025-01229-z","url":null,"abstract":"Cognitive impairment (CI) is a common and early non-motor manifestation of Parkinson's disease (PD), yet its biochemical basis remains poorly understood. Given the emerging link between bile acids (BAs) and neurodegeneration, we investigated whether serum BA profiles differ by cognitive status in PD and whether they can classify CI. A total of 363 participants were enrolled, including 63 healthy controls, 154 PD patients with normal cognition, and 146 with CI. Serum BA concentrations were quantified by ultra-performance liquid chromatography-tandem mass spectrometry, and multivariate as well as machine learning analyses were applied. Compared with cognitively normal PD patients, those with CI exhibited distinct BA alterations, characterized by elevated deoxycholic and cholic acids and reduced glyco- and tauro-conjugated species. Deoxycholic acid showed the strongest negative correlations with cognitive scores. Machine learning models based on combined BA profiles, particularly the random forest classifier, achieved robust discrimination between PD-CI and PD-NC groups (AUC up to 0.90). These findings indicate that BA dysregulation is closely linked to cognitive impairment in PD and may serve as a promising metabolic biomarker for early detection. Clinical trial number. Not applicable.","PeriodicalId":19706,"journal":{"name":"NPJ Parkinson's Disease","volume":"29 1","pages":""},"PeriodicalIF":8.7,"publicationDate":"2025-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145704413","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Local field potentials survey to guide DBS programming in Parkinson's disease: a clinical-neurophysiological longitudinal study. 局部场电位调查指导帕金森病DBS规划:一项临床-神经生理学纵向研究。
IF 8.7 1区 医学 Q1 NEUROSCIENCES Pub Date : 2025-12-07 DOI: 10.1038/s41531-025-01208-4
Valentina D'Onofrio,Luca Weis,Leonardo Rigon,Dario Ciprietti,Laura Ludovica Grassi,Andrea Landi,Camillo Porcaro,Gerd Tinkhauser,Angelo Antonini,Andrea Guerra
Deep Brain Stimulation (DBS) programming in Parkinson's disease relies on clinical evaluation, yet beta-band activity in local field potentials (LFPs) may offer objective guidance. We evaluated LFP-guided contact selection against clinical programming (CP) at initial monopolar review and long-term follow-up. Bipolar LFPs were recorded in patients with sensing-enabled DBS systems, where central levels were clinically chosen. Three methods based on beta peak amplitude were tested: Broad-Bipolar (non-adjacent rings), Narrow-Bipolar (contiguous rings), and Segment-Bipolar (horizontal segments). Performance was assessed using correlation, agreement, and selection similarity with CP and compared to random selection. Narrow-Bipolar showed the strongest correlation and agreement with CP at both timepoints, outperforming other methods and random selection. It showed the greatest selection stability over time and the highest prediction. Its performance was comparable to imaging-guided programming and did not differ between STN and GPi. These results support Narrow-Bipolar as a valid, easy-to-perform beta-based method for guiding DBS programming.
脑深部电刺激(DBS)在帕金森病中的应用依赖于临床评估,而局部场电位(LFPs)的β带活性可能提供客观指导。在最初的单极回顾和长期随访中,我们评估了lfp引导的接触者选择与临床规划(CP)的对比。双相lfp记录在具有传感功能的DBS系统的患者中,临床选择中心水平。测试了三种基于β峰振幅的方法:Broad-Bipolar(非相邻环)、Narrow-Bipolar(相邻环)和Segment-Bipolar(水平环)。使用与CP的相关性、一致性和选择相似性来评估性能,并与随机选择进行比较。窄双相与CP在两个时间点的相关性和一致性最强,优于其他方法和随机选择。随着时间的推移,它表现出最大的选择稳定性和最高的预测。其性能与成像引导编程相当,在STN和GPi之间没有差异。这些结果支持Narrow-Bipolar作为一种有效的、易于执行的基于beta的方法来指导DBS编程。
{"title":"Local field potentials survey to guide DBS programming in Parkinson's disease: a clinical-neurophysiological longitudinal study.","authors":"Valentina D'Onofrio,Luca Weis,Leonardo Rigon,Dario Ciprietti,Laura Ludovica Grassi,Andrea Landi,Camillo Porcaro,Gerd Tinkhauser,Angelo Antonini,Andrea Guerra","doi":"10.1038/s41531-025-01208-4","DOIUrl":"https://doi.org/10.1038/s41531-025-01208-4","url":null,"abstract":"Deep Brain Stimulation (DBS) programming in Parkinson's disease relies on clinical evaluation, yet beta-band activity in local field potentials (LFPs) may offer objective guidance. We evaluated LFP-guided contact selection against clinical programming (CP) at initial monopolar review and long-term follow-up. Bipolar LFPs were recorded in patients with sensing-enabled DBS systems, where central levels were clinically chosen. Three methods based on beta peak amplitude were tested: Broad-Bipolar (non-adjacent rings), Narrow-Bipolar (contiguous rings), and Segment-Bipolar (horizontal segments). Performance was assessed using correlation, agreement, and selection similarity with CP and compared to random selection. Narrow-Bipolar showed the strongest correlation and agreement with CP at both timepoints, outperforming other methods and random selection. It showed the greatest selection stability over time and the highest prediction. Its performance was comparable to imaging-guided programming and did not differ between STN and GPi. These results support Narrow-Bipolar as a valid, easy-to-perform beta-based method for guiding DBS programming.","PeriodicalId":19706,"journal":{"name":"NPJ Parkinson's Disease","volume":"242 1","pages":""},"PeriodicalIF":8.7,"publicationDate":"2025-12-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145696779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Longitudinal insights from iron accumulation in motor system of prodromal and clinical Parkinson’s disease 前驱和临床帕金森病运动系统铁积累的纵向观察
IF 8.7 1区 医学 Q1 NEUROSCIENCES Pub Date : 2025-12-06 DOI: 10.1038/s41531-025-01223-5
Sijia Huang, Liche Zhou, Zhenghao Li, Tian Zeng, Yuchao Yang, Ningyuan Wang, Qianyi Yin, Xiaojin Wang, Hongjiang Wei, Jun Liu
{"title":"Longitudinal insights from iron accumulation in motor system of prodromal and clinical Parkinson’s disease","authors":"Sijia Huang, Liche Zhou, Zhenghao Li, Tian Zeng, Yuchao Yang, Ningyuan Wang, Qianyi Yin, Xiaojin Wang, Hongjiang Wei, Jun Liu","doi":"10.1038/s41531-025-01223-5","DOIUrl":"https://doi.org/10.1038/s41531-025-01223-5","url":null,"abstract":"","PeriodicalId":19706,"journal":{"name":"NPJ Parkinson's Disease","volume":"29 1","pages":""},"PeriodicalIF":8.7,"publicationDate":"2025-12-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145680159","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Longitudinal assessment of DNA repair signature trajectory in prodromal versus established Parkinson’s disease 前驱与已确诊帕金森病DNA修复特征轨迹的纵向评估
IF 8.7 1区 医学 Q1 NEUROSCIENCES Pub Date : 2025-12-05 DOI: 10.1038/s41531-025-01194-7
Danish Anwer, Nicola Pietro Montaldo, Elva Maria Novoa-del-Toro, Diana Domanska, Hilde Loge Nilsen, Annikka Polster
Parkinson’s disease (PD) is a progressive neurodegenerative disorder. DNA repair dysfunction and integrated stress response (ISR) dysregulation have been implicated in PD pathophysiology, however, their role during the prodromal phase remains unclear. We analyzed longitudinal blood transcriptomic data from the Parkinson’s Progression Markers Initiative to assess DNA repair and ISR genes in healthy individuals, prodromal PD, and those with established PD. Logistic regression classifiers showed that DNA repair and ISR expression distinguished prodromal PD from healthy individuals, with accuracy peaking in later prodromal stages. In contrast, these pathways did not separate established PD from controls, suggesting a more prominent role early in progression. Gene expression variability in prodromal PD was high at baseline but decreased over time, indicating convergence as disease advances. Notably, 50% of DNA repair genes and 74% of ISR genes showed non-linear patterns, suggesting a transient adaptive response fading with progression. Feature importance analysis highlighted several predictors of prodromal PD, including ERCC6, PRIMPOL, NEIL2, and NTHL1. These findings indicate that DNA repair and ISR dysregulation are relevant in prodromal PD and may be biomarkers for early detection and intervention. Future research should validate these results in larger cohorts and evaluate diagnostic and therapeutic potential.
帕金森病(PD)是一种进行性神经退行性疾病。DNA修复功能障碍和综合应激反应(ISR)失调与PD病理生理有关,然而,它们在前驱期的作用尚不清楚。我们分析了来自帕金森进展标记计划的纵向血液转录组数据,以评估健康个体、前驱期PD和已确诊PD患者的DNA修复和ISR基因。逻辑回归分类器显示DNA修复和ISR表达将PD前驱与健康个体区分开来,准确度在前驱后期达到峰值。相比之下,这些途径并没有将已建立的PD与对照组分开,这表明在进展早期发挥了更突出的作用。PD前驱期的基因表达变异性在基线时很高,但随着时间的推移而降低,表明随着疾病的进展而趋同。值得注意的是,50%的DNA修复基因和74%的ISR基因呈现非线性模式,表明短暂的适应性反应随着进展而消退。特征重要性分析强调了前驱PD的几个预测因子,包括ERCC6、PRIMPOL、NEIL2和NTHL1。这些发现表明,DNA修复和ISR失调与PD前驱有关,可能是早期发现和干预的生物标志物。未来的研究应该在更大的队列中验证这些结果,并评估诊断和治疗潜力。
{"title":"Longitudinal assessment of DNA repair signature trajectory in prodromal versus established Parkinson’s disease","authors":"Danish Anwer, Nicola Pietro Montaldo, Elva Maria Novoa-del-Toro, Diana Domanska, Hilde Loge Nilsen, Annikka Polster","doi":"10.1038/s41531-025-01194-7","DOIUrl":"https://doi.org/10.1038/s41531-025-01194-7","url":null,"abstract":"Parkinson’s disease (PD) is a progressive neurodegenerative disorder. DNA repair dysfunction and integrated stress response (ISR) dysregulation have been implicated in PD pathophysiology, however, their role during the prodromal phase remains unclear. We analyzed longitudinal blood transcriptomic data from the Parkinson’s Progression Markers Initiative to assess DNA repair and ISR genes in healthy individuals, prodromal PD, and those with established PD. Logistic regression classifiers showed that DNA repair and ISR expression distinguished prodromal PD from healthy individuals, with accuracy peaking in later prodromal stages. In contrast, these pathways did not separate established PD from controls, suggesting a more prominent role early in progression. Gene expression variability in prodromal PD was high at baseline but decreased over time, indicating convergence as disease advances. Notably, 50% of DNA repair genes and 74% of ISR genes showed non-linear patterns, suggesting a transient adaptive response fading with progression. Feature importance analysis highlighted several predictors of prodromal PD, including ERCC6, PRIMPOL, NEIL2, and NTHL1. These findings indicate that DNA repair and ISR dysregulation are relevant in prodromal PD and may be biomarkers for early detection and intervention. Future research should validate these results in larger cohorts and evaluate diagnostic and therapeutic potential.","PeriodicalId":19706,"journal":{"name":"NPJ Parkinson's Disease","volume":"22 1","pages":""},"PeriodicalIF":8.7,"publicationDate":"2025-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145680367","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Subitem-level multi-scale assessment and machine learning for three-class cognitive status classification in Parkinson’s disease 帕金森病三级认知状态分类的子项级多尺度评估与机器学习
IF 8.7 1区 医学 Q1 NEUROSCIENCES Pub Date : 2025-12-04 DOI: 10.1038/s41531-025-01218-2
Ying-Che Chen, Rwei-Ling Yu, Sun-Yuan Hsieh
{"title":"Subitem-level multi-scale assessment and machine learning for three-class cognitive status classification in Parkinson’s disease","authors":"Ying-Che Chen, Rwei-Ling Yu, Sun-Yuan Hsieh","doi":"10.1038/s41531-025-01218-2","DOIUrl":"https://doi.org/10.1038/s41531-025-01218-2","url":null,"abstract":"","PeriodicalId":19706,"journal":{"name":"NPJ Parkinson's Disease","volume":"10 1","pages":""},"PeriodicalIF":8.7,"publicationDate":"2025-12-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145664618","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Unveiling hidden neurodegeneration in isolated REM sleep behavior disorder through MRI microstructure and glymphatic flow. 通过MRI微结构和淋巴流动揭示孤立性快速眼动睡眠行为障碍的隐性神经退行性变。
IF 8.7 1区 医学 Q1 NEUROSCIENCES Pub Date : 2025-12-03 DOI: 10.1038/s41531-025-01193-8
Silvia Basaia,Elisabetta Sarasso,Andrea Gardoni,Andrea Grassi,Alejandro Enrique Brivio,Sara Marelli,Roberta Balestrino,Lucia Zenere,Alessandra Castelnuovo,Massimo Malcangi,Elisa Canu,Luigi Ferini-Strambi,Federica Agosta,Massimo Filippi
This study aimed at: (1) assessing microstructural MRI and glymphatic flow alterations in isolated REM sleep behavioral disorder (iRBD) subjects relative to controls; (2) comparing sub-groups of iRBD patients with different levels of disease severity; and (3) studying the correlations between clinical alterations and MRI changes. 44 iRBD subjects and 52 controls underwent clinical and MRI evaluations. Gray and white-matter microstructural alterations were studied. Diffusion-tensor image analysis along the perivascular space (DTI-ALPS) index was obtained for the evaluation of glymphatic flow functionality. Cluster analysis was applied to divide iRBD patients in sub-groups. IRBD subjects showed worse sleep quality, reduced manual dexterity and gait alterations relative to controls. IRBD had alterations in the gray matter of fronto-parietal lobes and in the white matter of brainstem and frontal lobe, and a lower DTI-ALPS index relative to controls. Correlation analyses in the iRBD group showed that worse gray-matter microstructural alterations correlated with worse manual dexterity, lower peak turning velocity during dual-task mobility and worse sleep quality. Cluster analysis identified two clusters, one with worse clinical, neuropsychological, gait performances and DTI-ALPS index. The study detected early neurodegeneration in iRBD, subtle clinical deficits, microstructural gray/white-matter changes, and lower DTI-ALPS scores hinting at glymphatic dysfunction.
本研究旨在:(1)评估孤立的快速眼动睡眠行为障碍(iRBD)受试者相对于对照组的微结构MRI和淋巴血流改变;(2)比较不同疾病严重程度的iRBD患者亚组;(3)研究临床改变与MRI变化的相关性。44名iRBD受试者和52名对照进行了临床和MRI评估。研究了灰质和白质的微观结构变化。采用沿血管周围间隙弥散张量图像分析(DTI-ALPS)指数评价淋巴血流功能。采用聚类分析对iRBD患者进行亚组划分。与对照组相比,IRBD受试者表现出更差的睡眠质量、更低的手灵活性和步态改变。IRBD患者额顶叶灰质、脑干和额叶白质发生改变,DTI-ALPS指数低于对照组。iRBD组的相关分析显示,较差的灰质微观结构改变与较差的手灵巧性、双任务移动时较低的峰值转身速度和较差的睡眠质量相关。聚类分析确定了两个聚类,其中一个聚类的临床、神经心理、步态表现和DTI-ALPS指数较差。该研究发现了iRBD的早期神经退行性变、细微的临床缺陷、微结构灰质/白质改变以及提示淋巴功能障碍的较低DTI-ALPS评分。
{"title":"Unveiling hidden neurodegeneration in isolated REM sleep behavior disorder through MRI microstructure and glymphatic flow.","authors":"Silvia Basaia,Elisabetta Sarasso,Andrea Gardoni,Andrea Grassi,Alejandro Enrique Brivio,Sara Marelli,Roberta Balestrino,Lucia Zenere,Alessandra Castelnuovo,Massimo Malcangi,Elisa Canu,Luigi Ferini-Strambi,Federica Agosta,Massimo Filippi","doi":"10.1038/s41531-025-01193-8","DOIUrl":"https://doi.org/10.1038/s41531-025-01193-8","url":null,"abstract":"This study aimed at: (1) assessing microstructural MRI and glymphatic flow alterations in isolated REM sleep behavioral disorder (iRBD) subjects relative to controls; (2) comparing sub-groups of iRBD patients with different levels of disease severity; and (3) studying the correlations between clinical alterations and MRI changes. 44 iRBD subjects and 52 controls underwent clinical and MRI evaluations. Gray and white-matter microstructural alterations were studied. Diffusion-tensor image analysis along the perivascular space (DTI-ALPS) index was obtained for the evaluation of glymphatic flow functionality. Cluster analysis was applied to divide iRBD patients in sub-groups. IRBD subjects showed worse sleep quality, reduced manual dexterity and gait alterations relative to controls. IRBD had alterations in the gray matter of fronto-parietal lobes and in the white matter of brainstem and frontal lobe, and a lower DTI-ALPS index relative to controls. Correlation analyses in the iRBD group showed that worse gray-matter microstructural alterations correlated with worse manual dexterity, lower peak turning velocity during dual-task mobility and worse sleep quality. Cluster analysis identified two clusters, one with worse clinical, neuropsychological, gait performances and DTI-ALPS index. The study detected early neurodegeneration in iRBD, subtle clinical deficits, microstructural gray/white-matter changes, and lower DTI-ALPS scores hinting at glymphatic dysfunction.","PeriodicalId":19706,"journal":{"name":"NPJ Parkinson's Disease","volume":"115 1","pages":"346"},"PeriodicalIF":8.7,"publicationDate":"2025-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145664276","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whole-exome sequencing and burden analysis identify six novel candidate risk genes and expand the genetic landscape of Parkinson's disease. 全外显子组测序和负担分析确定了六个新的候选风险基因,并扩大了帕金森病的遗传格局。
IF 8.7 1区 医学 Q1 NEUROSCIENCES Pub Date : 2025-12-03 DOI: 10.1038/s41531-025-01195-6
Yu Fan,Zhen Hu,Qin-Qin Yan,Jing-Jin Wan,Jun Liu
Parkinson's Disease (PD) is a complex neurodegenerative disorder with a largely undefined genetic architecture, particularly regarding the role of rare coding variants. We performed a large-scale exome-wide association study to systematically identify rare genetic risk factors for PD. We analyzed whole-exome sequencing (WES) data from 3,602 PD patients and a strictly defined control group of 145,496 individuals of European ancestry from the UK Biobank. We focused on identifying high-confidence protein-truncating variants (PTVs) and used a rigorous gene-based association analysis to find genes significantly associated with PD risk. Our analysis identified PTVs in nine genes that were significantly more frequent in PD cases. These include three previously reported genes for PD/parkinsonism (ATP5F1C, COMMD9, and OPA1) and six novel genes (RGMB, SNX13, MGST2, NMBR, RCBTB1, and JAG1). Following sensitivity analyses, eight genes remained significant. Functional enrichment analysis highlighted pathways related to Notch binding and glutathione transferase activity. This study significantly expands the known genetic landscape of PD by identifying six novel candidate risk genes. Our findings underscore the importance of rare, high-impact PTVs in PD pathogenesis and provide new avenues for mechanistic research and the development of targeted therapeutics.
帕金森病(PD)是一种复杂的神经退行性疾病,其遗传结构在很大程度上是不确定的,特别是关于罕见编码变异的作用。我们进行了一项大规模的全外显子组关联研究,以系统地确定PD的罕见遗传危险因素。我们分析了来自3602名PD患者的全外显子组测序(WES)数据,以及来自UK Biobank的145496名欧洲血统个体的严格定义的对照组。我们专注于鉴定高可信度的蛋白截断变异(PTVs),并使用严格的基于基因的关联分析来寻找与帕金森病风险显著相关的基因。我们的分析发现,PD病例中有9个基因的ptv明显更常见。其中包括三个先前报道的PD/帕金森病基因(ATP5F1C、COMMD9和OPA1)和六个新基因(RGMB、SNX13、MGST2、NMBR、RCBTB1和JAG1)。敏感性分析后,8个基因仍然显著。功能富集分析强调了Notch结合和谷胱甘肽转移酶活性相关的途径。本研究通过确定六个新的候选风险基因,显著扩展了PD的已知遗传格局。我们的发现强调了罕见的、高影响的pvt在PD发病机制中的重要性,并为机制研究和靶向治疗的发展提供了新的途径。
{"title":"Whole-exome sequencing and burden analysis identify six novel candidate risk genes and expand the genetic landscape of Parkinson's disease.","authors":"Yu Fan,Zhen Hu,Qin-Qin Yan,Jing-Jin Wan,Jun Liu","doi":"10.1038/s41531-025-01195-6","DOIUrl":"https://doi.org/10.1038/s41531-025-01195-6","url":null,"abstract":"Parkinson's Disease (PD) is a complex neurodegenerative disorder with a largely undefined genetic architecture, particularly regarding the role of rare coding variants. We performed a large-scale exome-wide association study to systematically identify rare genetic risk factors for PD. We analyzed whole-exome sequencing (WES) data from 3,602 PD patients and a strictly defined control group of 145,496 individuals of European ancestry from the UK Biobank. We focused on identifying high-confidence protein-truncating variants (PTVs) and used a rigorous gene-based association analysis to find genes significantly associated with PD risk. Our analysis identified PTVs in nine genes that were significantly more frequent in PD cases. These include three previously reported genes for PD/parkinsonism (ATP5F1C, COMMD9, and OPA1) and six novel genes (RGMB, SNX13, MGST2, NMBR, RCBTB1, and JAG1). Following sensitivity analyses, eight genes remained significant. Functional enrichment analysis highlighted pathways related to Notch binding and glutathione transferase activity. This study significantly expands the known genetic landscape of PD by identifying six novel candidate risk genes. Our findings underscore the importance of rare, high-impact PTVs in PD pathogenesis and provide new avenues for mechanistic research and the development of targeted therapeutics.","PeriodicalId":19706,"journal":{"name":"NPJ Parkinson's Disease","volume":"113 1","pages":"347"},"PeriodicalIF":8.7,"publicationDate":"2025-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145664275","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
TMEM175, SCARB2 and CTSB associations with Parkinson's disease risk across populations. TMEM175、SCARB2和CTSB与人群帕金森病风险的相关性
IF 8.2 1区 医学 Q1 NEUROSCIENCES Pub Date : 2025-12-02 DOI: 10.1038/s41531-025-01180-z
Wenhua Sun, Claudia Schulte, Thomas Gasser, Manuela Tan

Genome-wide association study of Parkinson's disease (PD) identified common variants associated with lysosomal mechanism, including TMEM175, SCARB2, and CTSB. We investigated the association between common and rare variants across populations using cohorts from the Global Parkinson's Genetics Program (GP2) (33,733 cases and 18,703 controls from ten ancestries). In the European cohort, we confirmed significant associations with PD risk for all known genetic risk variants across the three genes and TMEM175 p. Met393Thr as an independent genome-wide significant signal. Additionally, a novel independent signal, SCARB2 rs11547135, was detected. The burden analysis linked PD to SCARB2 in African American, Ashkenazi Jewish and East Asian cohorts. Single variants-based tests identified rare missense variants in SCARB2 in several populations. Our study reinforces the association of lysosomal genetic variants with PD risk, revealing genetic heterogeneity across populations.

帕金森病(PD)的全基因组关联研究发现了与溶酶体机制相关的常见变异,包括TMEM175、SCARB2和CTSB。我们使用来自全球帕金森遗传学计划(GP2)的队列(来自10个祖先的33,733例病例和18,703例对照)调查了人群中常见和罕见变异之间的关系。在欧洲队列中,我们证实了三个基因中所有已知的遗传风险变异与PD风险的显著关联,TMEM175 p. Met393Thr是一个独立的全基因组显著信号。此外,还检测到一个新的独立信号SCARB2 rs11547135。在非裔美国人、德系犹太人和东亚人群中,负担分析将PD与SCARB2联系起来。基于单变异的检测在几个人群中发现了罕见的SCARB2错义变异。我们的研究强调了溶酶体遗传变异与帕金森病风险的关联,揭示了人群之间的遗传异质性。
{"title":"TMEM175, SCARB2 and CTSB associations with Parkinson's disease risk across populations.","authors":"Wenhua Sun, Claudia Schulte, Thomas Gasser, Manuela Tan","doi":"10.1038/s41531-025-01180-z","DOIUrl":"10.1038/s41531-025-01180-z","url":null,"abstract":"<p><p>Genome-wide association study of Parkinson's disease (PD) identified common variants associated with lysosomal mechanism, including TMEM175, SCARB2, and CTSB. We investigated the association between common and rare variants across populations using cohorts from the Global Parkinson's Genetics Program (GP2) (33,733 cases and 18,703 controls from ten ancestries). In the European cohort, we confirmed significant associations with PD risk for all known genetic risk variants across the three genes and TMEM175 p. Met393Thr as an independent genome-wide significant signal. Additionally, a novel independent signal, SCARB2 rs11547135, was detected. The burden analysis linked PD to SCARB2 in African American, Ashkenazi Jewish and East Asian cohorts. Single variants-based tests identified rare missense variants in SCARB2 in several populations. Our study reinforces the association of lysosomal genetic variants with PD risk, revealing genetic heterogeneity across populations.</p>","PeriodicalId":19706,"journal":{"name":"NPJ Parkinson's Disease","volume":" ","pages":"348"},"PeriodicalIF":8.2,"publicationDate":"2025-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12678402/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145661212","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
ALDH2 protects against dopaminergic neuronal cell ferroptosis by enhancing the enzyme activity of PRDX6 in Parkinson's disease. ALDH2通过增强帕金森病患者PRDX6的酶活性来防止多巴胺能神经元细胞铁凋亡。
IF 8.7 1区 医学 Q1 NEUROSCIENCES Pub Date : 2025-12-02 DOI: 10.1038/s41531-025-01155-0
Xuan Li,Si-Jia Peng,Yu Wang,Xin Chen,Ting-Ting Wu,Ya Feng,Xi-Xi Wang,Huiyong Yin,Yun-Cheng Wu
Emerging evidence suggests that ferroptosis is probably involved in the selective loss of dopaminergic neurons in Parkinson's disease (PD). Acetaldehyde dehydrogenase 2 (ALDH2) plays an important role in detoxifying lipid aldehydes derived from lipid peroxidation, a process that is closely linked to ferroptosis. In our study, ALDH2 knockout (KO) mice were more susceptible to the loss of tyrosine hydroxylase-positive neurons and behavioral changes in a PD mouse model. Similar observations were made in a knock-in (KI) mouse model with one of the most common single-nucleotide polymorphisms of ALDH2, rs671. Interestingly, ALDH2 KO or KI mice showed enhanced ferroptosis in the SN. Moreover, expression of ALDH2 modified the sensitivity of SH-SY5Y cells to ferroptosis inducers. Mechanistic studies have shown that ALDH2 regulates neuronal cell ferroptosis by interacting with the antioxidant enzyme peroxiredoxin 6 (PRDX6) to enhance its enzymatic activity, whereas the ALDH2 rs671 variant weakens its binding to PRDX6.
新出现的证据表明,铁下垂可能与帕金森病(PD)中多巴胺能神经元的选择性丧失有关。乙醛脱氢酶2 (ALDH2)在解毒脂质过氧化产生的脂质醛中起重要作用,这一过程与铁死亡密切相关。在我们的研究中,在PD小鼠模型中,ALDH2敲除(KO)小鼠更容易失去酪氨酸羟化酶阳性神经元和行为改变。在具有ALDH2最常见的单核苷酸多态性之一rs671的敲入(KI)小鼠模型中也进行了类似的观察。有趣的是,ALDH2 KO或KI小鼠在SN中表现出增强的铁下垂。此外,ALDH2的表达改变了SH-SY5Y细胞对铁下垂诱导剂的敏感性。机制研究表明,ALDH2通过与抗氧化酶过氧化物还蛋白6 (PRDX6)相互作用,增强其酶活性来调节神经元细胞铁凋亡,而ALDH2 rs671变体减弱了其与PRDX6的结合。
{"title":"ALDH2 protects against dopaminergic neuronal cell ferroptosis by enhancing the enzyme activity of PRDX6 in Parkinson's disease.","authors":"Xuan Li,Si-Jia Peng,Yu Wang,Xin Chen,Ting-Ting Wu,Ya Feng,Xi-Xi Wang,Huiyong Yin,Yun-Cheng Wu","doi":"10.1038/s41531-025-01155-0","DOIUrl":"https://doi.org/10.1038/s41531-025-01155-0","url":null,"abstract":"Emerging evidence suggests that ferroptosis is probably involved in the selective loss of dopaminergic neurons in Parkinson's disease (PD). Acetaldehyde dehydrogenase 2 (ALDH2) plays an important role in detoxifying lipid aldehydes derived from lipid peroxidation, a process that is closely linked to ferroptosis. In our study, ALDH2 knockout (KO) mice were more susceptible to the loss of tyrosine hydroxylase-positive neurons and behavioral changes in a PD mouse model. Similar observations were made in a knock-in (KI) mouse model with one of the most common single-nucleotide polymorphisms of ALDH2, rs671. Interestingly, ALDH2 KO or KI mice showed enhanced ferroptosis in the SN. Moreover, expression of ALDH2 modified the sensitivity of SH-SY5Y cells to ferroptosis inducers. Mechanistic studies have shown that ALDH2 regulates neuronal cell ferroptosis by interacting with the antioxidant enzyme peroxiredoxin 6 (PRDX6) to enhance its enzymatic activity, whereas the ALDH2 rs671 variant weakens its binding to PRDX6.","PeriodicalId":19706,"journal":{"name":"NPJ Parkinson's Disease","volume":"51 1","pages":""},"PeriodicalIF":8.7,"publicationDate":"2025-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145656830","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The relationship between neuropsychiatric dimensions and markers of Parkinson’s disease risk in the UK Biobank 神经精神维度与英国生物银行帕金森病风险标志物之间的关系
IF 8.7 1区 医学 Q1 NEUROSCIENCES Pub Date : 2025-12-01 DOI: 10.1038/s41531-025-01181-y
Bahaaeddin Attaallah, Sheena Waters, Charles Marshall, Alastair Noyce
Neuropsychiatric symptoms are a significant yet often overlooked aspect of Parkinson’s disease (PD). Using UK Biobank data, we examined associations between neuropsychiatric dimensions and PD risk markers. Factor analysis identified four dimensions—Depression, Anxiety, Adult Stress-Adversity, and Alcohol- and Substance-Related Behaviours (ASRB) —across three groups: PD, healthy controls, and cerebrovascular disease (CVD) as neurological controls. These dimensions showed distinct patterns in PD. Depression scores were significantly elevated, while ASRB scores were consistently lower. Neuroimaging linked ASRB to subcortical changes specific to PD, particularly quantitative susceptibility mapping in the substantia nigra, consistent with the dopaminergic system’s role in goal-directed behaviour. GBA1 carrier status was linked to age-related changes in this dimension. Furthermore, PD patients with higher ASRB showed greater volatility in cognitive and motor function, with worsening before diagnosis and subsequent improvement. These findings highlight the complex interplay between psychiatric symptoms, neurobiological changes, and genetic factors in PD, suggesting that specific neuropsychiatric profiles may serve as early indicators of disease risk and progression.
神经精神症状是帕金森病(PD)的一个重要但经常被忽视的方面。使用UK Biobank数据,我们检查了神经精神维度与PD风险标志物之间的关联。因子分析确定了三个组的四个维度——抑郁、焦虑、成人压力逆境、酒精和物质相关行为(ASRB): PD、健康对照组和脑血管疾病(CVD)作为神经控制。这些维度在PD中表现出明显的模式。抑郁评分显著升高,而ASRB评分持续降低。神经影像学将ASRB与PD特异性皮质下变化联系起来,特别是黑质的定量易感性映射,与多巴胺能系统在目标导向行为中的作用一致。GBA1携带者的状态与这一维度的年龄相关变化有关。此外,ASRB较高的PD患者在认知和运动功能方面表现出更大的波动性,诊断前恶化,随后改善。这些发现强调了PD中精神症状、神经生物学变化和遗传因素之间复杂的相互作用,表明特定的神经精神特征可能作为疾病风险和进展的早期指标。
{"title":"The relationship between neuropsychiatric dimensions and markers of Parkinson’s disease risk in the UK Biobank","authors":"Bahaaeddin Attaallah, Sheena Waters, Charles Marshall, Alastair Noyce","doi":"10.1038/s41531-025-01181-y","DOIUrl":"https://doi.org/10.1038/s41531-025-01181-y","url":null,"abstract":"Neuropsychiatric symptoms are a significant yet often overlooked aspect of Parkinson’s disease (PD). Using UK Biobank data, we examined associations between neuropsychiatric dimensions and PD risk markers. Factor analysis identified four dimensions—Depression, Anxiety, Adult Stress-Adversity, and Alcohol- and Substance-Related Behaviours (ASRB) —across three groups: PD, healthy controls, and cerebrovascular disease (CVD) as neurological controls. These dimensions showed distinct patterns in PD. Depression scores were significantly elevated, while ASRB scores were consistently lower. Neuroimaging linked ASRB to subcortical changes specific to PD, particularly quantitative susceptibility mapping in the substantia nigra, consistent with the dopaminergic system’s role in goal-directed behaviour. <jats:italic>GBA1</jats:italic> carrier status was linked to age-related changes in this dimension. Furthermore, PD patients with higher ASRB showed greater volatility in cognitive and motor function, with worsening before diagnosis and subsequent improvement. These findings highlight the complex interplay between psychiatric symptoms, neurobiological changes, and genetic factors in PD, suggesting that specific neuropsychiatric profiles may serve as early indicators of disease risk and progression.","PeriodicalId":19706,"journal":{"name":"NPJ Parkinson's Disease","volume":"72 1","pages":""},"PeriodicalIF":8.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145645151","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
NPJ Parkinson's Disease
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1