Strawberry wilt disease, caused by Fusarium oxysporum f. sp. fragariae (Fof) results in a considerable decline in both strawberry yield and quality. Fludioxonil, a phenylpyrrole-class fungicide, is widely recognized for its effective control against various fungal pathogens. However, its specific activity against Fof has been insufficiently investigated. In this study, we assessed the antifungal activity of fludioxonil against Fof by determining the EC50 values for 100 Fof strains. The average EC50 value was 0.0239 ± 0.0032 μg/mL, indicating strong antifungal activity, which was further supported by a unimodal distribution of the EC50 values. Furthermore, eight highly resistant mutants were generated through in vitro fungicide taming. These mutants exhibited reduced biological fitness, as evidenced by diminished sporulation capacity and attenuated virulence. Under fludioxonil treatment, sensitive strains showed a significant increase in intracellular glycerol accumulation, whereas no significant change was observed in the resistant mutants. Moreover, the resistant mutants showed heightened sensitivity to hyperosmotic stresses. No cross-resistance was observed between fludioxonil and other fungicides with distinct modes of action, including phenamacril, carbendazim, pydiflumetofen, pyraclostrobin, tebuconazole, and fluazinam. Moreover, the phosphorylation level of FoHog1 was significantly lower in the resistant mutants compared to the sensitive strains. Mutations in key components FoOs1, FoOs5, and FoOs2 in the MAPK cascade pathway were identified in the resistant mutants. Based on these findings, we conclude that the risk of resistance development in Fof toward fludioxonil can be classified as low to moderate.
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