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A cross species thermoelectric and spatiotemporal analysis of alternans in live explanted hearts using dual voltage-calcium fluorescence optical mapping. 利用双电压-钙荧光光学图谱对活体移植心脏的交变进行跨物种热电和时空分析。
IF 3.2 4区 医学 Q3 BIOPHYSICS Pub Date : 2024-06-04 DOI: 10.1088/1361-6579/ad4e8f
Anna Crispino, Alessandro Loppini, Ilija Uzelac, Shahriar Iravanian, Neal K Bhatia, Michael Burke, Simonetta Filippi, Flavio H Fenton, Alessio Gizzi

Objective.Temperature plays a crucial role in influencing the spatiotemporal dynamics of the heart. Electrical instabilities due to specific thermal conditions typically lead to early period-doubling bifurcations and beat-to-beat alternans. These pro-arrhythmic phenomena manifest in voltage and calcium traces, resulting in compromised contractile behaviors. In such intricate scenario, dual optical mapping technique was used to uncover unexplored multi-scale and nonlinear couplings, essential for early detection and understanding of cardiac arrhythmia.Approach.We propose a methodological analysis of synchronized voltage-calcium signals for detecting alternans, restitution curves, and spatiotemporal alternans patterns under different thermal conditions, based on integral features calculation. To validate our approach, we conducted a cross-species investigation involving rabbit and guinea pig epicardial ventricular surfaces and human endocardial tissue under pacing-down protocols.Main results.We show that the proposed integral feature, as the area under the curve, could be an easily applicable indicator that may enhance the predictability of the onset and progression of cardiac alternans. Insights into spatiotemporal correlation analysis of characteristic spatial lengths across different heart species were further provided.Significance.Exploring cross-species thermoelectric features contributes to understanding temperature-dependent proarrhythmic regimes and their implications on coupled spatiotemporal voltage-calcium dynamics. The findings provide preliminary insights and potential strategies for enhancing arrhythmia detection and treatment.

目的温度在影响心脏时空动态方面起着至关重要的作用。由特定热条件引起的电不稳定性通常会导致早期周期加倍分岔和搏动交替。这些助长心律失常的现象表现在电压和钙描记上,导致收缩行为受损。在这种错综复杂的情况下,双光学映射技术被用来揭示尚未探索的多尺度和非线性耦合,这对早期检测和了解心律失常至关重要。我们提出了一种基于积分特征计算的同步电压-钙信号分析方法,用于检测不同热条件下的交替、恢复曲线和时空交替模式。为了验证我们的方法,我们进行了一项跨物种调查,涉及起搏下降协议下的兔子和豚鼠心外膜心室表面以及人类心内膜组织。我们的研究表明,所提出的积分特征,即曲线下面积,是一个易于应用的指标,可以提高对心脏交替起搏和进展的可预测性。我们还对不同心脏物种特征空间长度的时空相关性分析提供了进一步的见解。探索跨物种的热电特征有助于理解温度依赖性心律失常前兆及其对电压-钙耦合时空动力学的影响。这些发现为加强心律失常的检测和治疗提供了初步见解和潜在策略。
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引用次数: 0
Highly comparative time series analysis of oxygen saturation and heart rate to predict respiratory outcomes in extremely preterm infants. 高度比较氧饱和度和心率的时间序列分析,以预测极早产儿的呼吸系统预后。
IF 2.3 4区 医学 Q3 BIOPHYSICS Pub Date : 2024-06-03 DOI: 10.1088/1361-6579/ad4e91
Jiaxing Qiu, Juliann M Di Fiore, Narayanan Krishnamurthi, Premananda Indic, John L Carroll, Nelson Claure, James S Kemp, Phyllis A Dennery, Namasivayam Ambalavanan, Debra E Weese-Mayer, Anna Maria Hibbs, Richard J Martin, Eduardo Bancalari, Aaron Hamvas, J Randall Moorman, Douglas E Lake, Katy N Krahn, Amanda M Zimmet, Bradley S Hopkins, Erin K Lonergan, Casey M Rand, Arlene Zadell, Arie Nakhmani, Waldemar A Carlo, Deborah Laney, Colm P Travers, Silvia Vanbuskirk, Carmen D'Ugard, Ana Cecilia Aguilar, Alini Schott, Julie Hoffmann, Laura Linneman

Objective.Highly comparative time series analysis (HCTSA) is a novel approach involving massive feature extraction using publicly available code from many disciplines. The Prematurity-Related Ventilatory Control (Pre-Vent) observational multicenter prospective study collected bedside monitor data from>700extremely preterm infants to identify physiologic features that predict respiratory outcomes.Approach. We calculated a subset of 33 HCTSA features on>7 M 10 min windows of oxygen saturation (SPO2) and heart rate (HR) from the Pre-Vent cohort to quantify predictive performance. This subset included representatives previously identified using unsupervised clustering on>3500HCTSA algorithms. We hypothesized that the best HCTSA algorithms would compare favorably to optimal PreVent physiologic predictor IH90_DPE (duration per event of intermittent hypoxemia events below 90%).Main Results.The top HCTSA features were from a cluster of algorithms associated with the autocorrelation of SPO2 time series and identified low frequency patterns of desaturation as high risk. These features had comparable performance to and were highly correlated with IH90_DPE but perhaps measure the physiologic status of an infant in a more robust way that warrants further investigation. The top HR HCTSA features were symbolic transformation measures that had previously been identified as strong predictors of neonatal mortality. HR metrics were only important predictors at early days of life which was likely due to the larger proportion of infants whose outcome was death by any cause. A simple HCTSA model using 3 top features outperformed IH90_DPE at day of life 7 (.778 versus .729) but was essentially equivalent at day of life 28 (.849 versus .850).Significance. These results validated the utility of a representative HCTSA approach but also provides additional evidence supporting IH90_DPE as an optimal predictor of respiratory outcomes.

目的:高度比较时间序列分析(HCTSA)是一种新颖的方法,涉及到利用许多学科的公开代码进行大规模特征提取。早产相关通气控制(Pre-Vent)多中心前瞻性观察研究收集了超过 700 名极度早产儿的床旁监护仪数据,以确定预测呼吸结果的生理特征。我们计算了来自 PreVent 队列的大于 700 万个 10 分钟氧饱和度 (SPO2) 和心率 (HR) 窗口的 33 个 HCTSA 特征子集,以量化预测性能。该子集包括之前在大于 3500 个 HCTSA 算法上使用无监督聚类确定的代表特征。每个特征的性能是通过生命不同天数和二元呼吸结果下的单个接收者操作曲线下面积(AUC)来衡量的。我们假设,最佳 HCTSA 算法将优于最佳 PreVent 生理预测指标 IH90_DPE(间歇性低氧血症事件每次持续时间低于 90%):最高的 HCTSA 特征来自一组与 SPO2 时间序列自相关性相关的算法,并将低频率的饱和度降低模式识别为高风险。这些特征与 IH90_DPE 的性能相当且高度相关,但也许能以更稳健的方式测量婴儿的生理状态,值得进一步研究。HR HCTSA 的首要特征是符号转换指标,这些指标之前已被确定为新生儿死亡率的有力预测指标。HR指标仅是生命早期的重要预测指标,这可能是由于较大比例的婴儿因任何原因死亡。使用 3 个顶级特征的简单 HCTSA 模型在生命第 7 天的表现优于 IH90_DPE(0.778 对 0.729),但在生命第 28 天的表现基本相当(0.849 对 0.850)。这些结果验证了具有代表性的 HCTSA 方法的实用性,同时也提供了更多证据支持 IH90_DPE 作为呼吸结局的最佳预测指标。
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引用次数: 0
Multi-source deep domain adaptation ensemble framework for cross-dataset motor imagery EEG transfer learning. 用于跨数据集运动图像脑电图转移学习的多源深度域自适应集合框架。
IF 3.2 4区 医学 Q3 BIOPHYSICS Pub Date : 2024-06-03 DOI: 10.1088/1361-6579/ad4e95
Minmin Miao, Zhong Yang, Zhenzhen Sheng, Baoguo Xu, Wenbin Zhang, Xinmin Cheng

Objective. Electroencephalography (EEG) is an important kind of bioelectric signal for measuring physiological activities of the brain, and motor imagery (MI) EEG has significant clinical application prospects. Convolutional neural network has become a mainstream algorithm for MI EEG classification, however lack of subject-specific data considerably restricts its decoding accuracy and generalization performance. To address this challenge, a novel transfer learning (TL) framework using auxiliary dataset to improve the MI EEG classification performance of target subject is proposed in this paper.Approach. We developed a multi-source deep domain adaptation ensemble framework (MSDDAEF) for cross-dataset MI EEG decoding. The proposed MSDDAEF comprises three main components: model pre-training, deep domain adaptation, and multi-source ensemble. Moreover, for each component, different designs were examined to verify the robustness of MSDDAEF.Main results. Bidirectional validation experiments were performed on two large public MI EEG datasets (openBMI and GIST). The highest average classification accuracy of MSDDAEF reaches 74.28% when openBMI serves as target dataset and GIST serves as source dataset. While the highest average classification accuracy of MSDDAEF is 69.85% when GIST serves as target dataset and openBMI serves as source dataset. In addition, the classification performance of MSDDAEF surpasses several well-established studies and state-of-the-art algorithms.Significance. The results of this study show that cross-dataset TL is feasible for left/right-hand MI EEG decoding, and further indicate that MSDDAEF is a promising solution for addressing MI EEG cross-dataset variability.

目的:脑电图(EEG)是测量大脑生理活动的一种重要的生物电信号,运动意象脑电图(MI)具有重要的临床应用前景。卷积神经网络(CNN)已成为运动图像脑电图分类的主流算法,但由于缺乏特定对象的数据,其解码精度和泛化性能受到很大限制。为应对这一挑战,本文提出了一种新型迁移学习(TL)框架,利用辅助数据集提高目标受试者的 MI EEG 分类性能:方法:我们为跨数据集 MI 脑电图解码开发了多源深度域自适应集合框架(MSDDAEF)。所提出的 MSDDAEF 由三个主要部分组成:模型预训练、深域适配和多源集合。此外,还对每个组件进行了不同的设计,以验证 MSDDAEF 的鲁棒性:在两个大型公共 MI EEG 数据集(openBMI 和 GIST)上进行了双向验证实验。当 openBMI 作为目标数据集,GIST 作为源数据集时,MSDDAEF 的最高平均分类准确率达到 74.28%。而当 GIST 作为目标数据集,openBMI 作为源数据集时,MSDDAEF 的最高平均分类准确率为 69.85%。此外,MSDDAEF 的分类性能还超过了几项成熟的研究和最先进的算法:本研究的结果表明,跨数据集 TL 对左/右手 MI 脑电图解码是可行的,并进一步表明 MSDDAEF 是解决 MI 脑电图跨数据集变异性的一种有前途的解决方案。
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引用次数: 0
Experimental validation of an advanced impedance pneumography for monitoring ventilation volume during programmed cycling exercise. 用于监测程序化自行车运动中通气量的先进阻抗气动仪的实验验证。
IF 3.2 4区 医学 Q3 BIOPHYSICS Pub Date : 2024-05-31 DOI: 10.1088/1361-6579/ad4951
Xing Zhou, Qin Liu, Zixuan Bai, Shan Xue, Zhibin Kong, Yixin Ma

Objective.Impedance pneumography (IP) has provided static assessments of subjects' breathing patterns in previous studies. Evaluating the feasibility and limitation of ambulatory IP based respiratory monitoring needs further investigation on clinically relevant exercise designs. The aim of this study was to evaluate the capacity of an advanced IP in ambulatory respiratory monitoring, and its predictive value in independent ventilatory capacity quantification during cardiopulmonary exercise testing (CPET).Approach.35 volunteers were examined with the same calibration methodology and CPET exercise protocol comprising phases of rest, unloaded, incremental load, maximum load, recovery and further-recovery. In 3 or 4 deep breaths of calibration stage, thoracic impedance and criterion spirometric volume were simultaneously recorded to produce phase-specific prior calibration coefficients (CCs). The IP measurement during exercise protocol was converted by prior CCs to volume estimation curve and thus calculate minute ventilation (VE) independent from the spirometry approach.Main results.Across all measurements, the relative error of IP-derived VE (VER) and flowrate-derived VE (VEf) was less than 13.8%. In Bland-Altman plots, the aggregate VE estimation bias was statistically insignificant for all 3 phases with pedaling exercise and the discrepancy between VERand VEffell within the 95% limits of agreement (95% LoA) for 34 or all subjects in each of all CPET phases.Significance.This work reinforces the independent use of IP as an accurate and robust alternative to flowmeter for applications in cycle ergometry CPET, which could significantly encourage the clinical use of IP and improve the convenience and comfort of CPET.

目的: 在以往的研究中,阻抗气动图(IP)可对受试者的呼吸模式进行静态评估。要评估基于 IP 的非卧床呼吸监测的可行性和局限性,还需要对临床相关的运动设计进行进一步研究。本研究的目的是评估高级 IP 在非卧床呼吸监测中的能力,以及其在心肺运动测试(CPET)中对独立通气能力量化的预测价值。方法:35 名志愿者采用相同的校准方法和 CPET 运动方案(包括休息、无负荷、增量负荷、最大负荷、恢复和进一步恢复阶段)接受检查。在校准阶段的 3 或 4 次深呼吸中,同时记录胸阻抗和标准肺活量,以生成特定阶段的先期校准系数(CC)。运动方案中的 IP 测量值通过先验 CC 转换为容积估计曲线,从而计算出独立于肺活量测量方法的分钟通气量(VE)。在 Bland-Altman 图中,在所有 3 个阶段的蹬踏运动中,总的 VE 估计偏差在统计上不显著,而且在所有 CPET 阶段的每个阶段,34 名或所有受试者的 VER 和 VEff 之间的差异都在 95% 的一致限度(95% LoA)内。
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引用次数: 0
Pitfalls and possibilities of using Root SedLine for continuous assessment of EEG waveform-based metrics in intensive care research. 在重症监护研究中使用 Root SedLine 对基于脑电图波形的指标进行连续评估的隐患和可能性。
IF 3.2 4区 医学 Q3 BIOPHYSICS Pub Date : 2024-05-30 DOI: 10.1088/1361-6579/ad46e4
Stefan Yu Bögli, Marina Sandra Cherchi, Ihsane Olakorede, Andrea Lavinio, Erta Beqiri, Ethan Moyer, Dick Moberg, Peter Smielewski

Objective.The Root SedLine device is used for continuous electroencephalography (cEEG)-based sedation monitoring in intensive care patients. The cEEG traces can be collected for further processing and calculation of relevant metrics not already provided. Depending on the device settings during acquisition, the acquired traces may be distorted by max/min value cropping or high digitization errors. We aimed to systematically assess the impact of these distortions on metrics used for clinical research in the field of neuromonitoring.Approach.A 16 h cEEG acquired using the Root SedLine device at the optimal screen settings was analyzed. Cropping and digitization error effects were simulated by consecutive reduction of the maximum cEEG amplitude by 2µV or by reducing the vertical resolution. Metrics were calculated within ICM+ using minute-by-minute data, including the total power, alpha delta ratio (ADR), and 95% spectral edge frequency. Data were analyzed by creating violin- or box-plots.Main Results.Cropping led to a continuous reduction in total and band power, leading to corresponding changes in variability thereof. The relative power and ADR were less affected. Changes in resolution led to relevant changes. While the total power and power of low frequencies were rather stable, the power of higher frequencies increased with reducing resolution.Significance.Care must be taken when acquiring and analyzing cEEG waveforms from Root SedLine for clinical research. To retrieve good quality metrics, the screen settings must be kept within the central vertical scale, while pre-processing techniques must be applied to exclude unacceptable periods.

目标:Root SedLine 设备用于对重症监护患者进行基于连续脑电图(cEEG)的镇静监测。采集的 cEEG 曲线可用于进一步处理和计算尚未提供的相关指标。根据采集时的设备设置,采集到的轨迹可能会因最大/最小值裁剪或数字化误差过大而失真。我们旨在系统地评估这些失真对神经监测领域临床研究指标的影响:我们对使用 Root SedLine 设备在最佳屏幕设置下采集的 16 小时 cEEG 进行了分析。通过将最大 cEEG 振幅连续降低 2µV 或降低垂直分辨率来模拟裁剪和数字化误差的影响。在 ICM+ 中使用逐分钟数据计算指标,包括总功率、α δ 比值和 95% 光谱边缘频率。通过创建小提琴图或箱形图对数据进行分析:裁剪导致总功率和频带功率持续下降,从而导致其变异性发生相应变化。相对功率和阿尔法δ比值受到的影响较小。分辨率的变化导致了相关的变化。总功率和低频功率相当稳定,而高频功率则随着分辨率的降低而增加:在临床研究中获取和分析 Root SedLine 的 cEEG 波形时必须小心谨慎。为了获得高质量的指标,屏幕设置必须保持在中央垂直刻度范围内,同时必须应用预处理技术排除不可接受的时段。
{"title":"Pitfalls and possibilities of using Root SedLine for continuous assessment of EEG waveform-based metrics in intensive care research.","authors":"Stefan Yu Bögli, Marina Sandra Cherchi, Ihsane Olakorede, Andrea Lavinio, Erta Beqiri, Ethan Moyer, Dick Moberg, Peter Smielewski","doi":"10.1088/1361-6579/ad46e4","DOIUrl":"10.1088/1361-6579/ad46e4","url":null,"abstract":"<p><p><i>Objective.</i>The Root SedLine device is used for continuous electroencephalography (cEEG)-based sedation monitoring in intensive care patients. The cEEG traces can be collected for further processing and calculation of relevant metrics not already provided. Depending on the device settings during acquisition, the acquired traces may be distorted by max/min value cropping or high digitization errors. We aimed to systematically assess the impact of these distortions on metrics used for clinical research in the field of neuromonitoring.<i>Approach.</i>A 16 h cEEG acquired using the Root SedLine device at the optimal screen settings was analyzed. Cropping and digitization error effects were simulated by consecutive reduction of the maximum cEEG amplitude by 2<i>µ</i>V or by reducing the vertical resolution. Metrics were calculated within ICM+ using minute-by-minute data, including the total power, alpha delta ratio (ADR), and 95% spectral edge frequency. Data were analyzed by creating violin- or box-plots.<i>Main Results.</i>Cropping led to a continuous reduction in total and band power, leading to corresponding changes in variability thereof. The relative power and ADR were less affected. Changes in resolution led to relevant changes. While the total power and power of low frequencies were rather stable, the power of higher frequencies increased with reducing resolution.<i>Significance.</i>Care must be taken when acquiring and analyzing cEEG waveforms from Root SedLine for clinical research. To retrieve good quality metrics, the screen settings must be kept within the central vertical scale, while pre-processing techniques must be applied to exclude unacceptable periods.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-05-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140869319","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phase angle and impedance ratio as meta-inflammation biomarkers after a colon cleansing protocol in a group of overweight young women. 相位角和阻抗比作为一组超重年轻女性结肠清洁方案后的元炎症生物标志物。
IF 3.2 4区 医学 Q3 BIOPHYSICS Pub Date : 2024-05-29 DOI: 10.1088/1361-6579/ad46df
L O Tapasco-Tapasco, C A Gonzalez-Correa, A Letourneur

Objective. Blood C-reactive protein (CRP) and the electrical bioimpedance spectroscopy (EBIS) variables phase angle (PhA) and impedance ratio (IR) have been proposed as biomarkers of metainflammation in overweight/obesity. CRP involves taking blood samples, while PhA and IR imply a less-than-2-minute-non-invasive procedure. In this study, values for these variables and percent body fat mass (PBFM) were obtained and compared before and immediately after a colon cleansing protocol (CCP), aimed at modulating intestinal microbiota and reducing metainflammation, as dysbiosis and the latter are intrinsically related, as well as along a period of 8 weeks after it.Approach. 20 female volunteers (20.9-24.9 years old) participated: 12 in an overweight group (OG), and 8 in a lean group (LG). TheOGwas divided in two subgroups (n= 6, each): control (CSG) and experimental (ESG). TheESGunderwent a 6-day CCP at week 2, while 5 volunteers in theCSGunderwent it at week 9.Main results.Pre/post-CCP mean values for the variables in theOGwere: PBFM (34.3/31.3%), CRP (3.7/0.6 mg dl-1), PhA (6.9/7.5°) and IR*10 (0.78/0.77). CalculatedR2correlation factors among these variables are all above 0.89. The favourable changes first seen in theESGwere still present 8 weeks after the CCP.Significance.(a) the CCP drastically lowers meta-inflammation, (b) EBIS can be used to measure metainflammation, before and after treatment, (c) for microbiota modulation, CCP could be a good alternative to more drastic procedures like faecal microbiota transplantation; (d) reestablishing eubiosis by CCP could be an effective coadjutant in the treatment of overweight young adult women.

背景: 血液中的 C 反应蛋白(CRP)和生物电阻抗(EBI)变量相位角(PhA)和阻抗比(IR)已被提出作为超重/肥胖症元炎症的生物标志物。CRP 需要采集血液样本,而 PhA 和 IR 则是一种不到 2 分钟的非侵入性程序。在这项研究中,我们获得了这些变量的值和体脂率(PBFM),并在结肠清洁方案(CCP)前后进行了比较,目的是调节肠道微生物群,以及在结肠清洁方案结束后的 8 周内进行比较:超重组(OG)12 人,瘦身组(LG)8 人。超重组被分为两个分组(各 6 人):对照组(SCG)和实验组(SEG)。ESG 在第 2 周接受了为期 6 天的结肠清洁方案 (CCP),而 CSG 中的 5 名志愿者则在第 9 周接受了该方案:PBF(34.3/31.3%)、CRP(3.7/0.6 mg/dL)、PhA(6.9/7.5°)和 IR*10 (0.78/0.77)。这些变量之间的计算 R2 相关系数均高于 0.89)。首次在 SEG 中看到的有利变化在 CCP 8 周后仍然存在。结论:a)CCP 大幅降低了元炎症;b)EBIS 可用来测量治疗前后的元炎症;c)对于微生物群调节,CCP 可以很好地替代粪便微生物群移植等更激烈的治疗方法;d)通过 CCP 重建 eubiosis 可以有效辅助治疗超重的年轻成年超重女性。
{"title":"Phase angle and impedance ratio as meta-inflammation biomarkers after a colon cleansing protocol in a group of overweight young women.","authors":"L O Tapasco-Tapasco, C A Gonzalez-Correa, A Letourneur","doi":"10.1088/1361-6579/ad46df","DOIUrl":"10.1088/1361-6579/ad46df","url":null,"abstract":"<p><p><i>Objective</i>. Blood C-reactive protein (CRP) and the electrical bioimpedance spectroscopy (EBIS) variables phase angle (PhA) and impedance ratio (IR) have been proposed as biomarkers of metainflammation in overweight/obesity. CRP involves taking blood samples, while PhA and IR imply a less-than-2-minute-non-invasive procedure. In this study, values for these variables and percent body fat mass (PBFM) were obtained and compared before and immediately after a colon cleansing protocol (CCP), aimed at modulating intestinal microbiota and reducing metainflammation, as dysbiosis and the latter are intrinsically related, as well as along a period of 8 weeks after it.<i>Approach</i>. 20 female volunteers (20.9-24.9 years old) participated: 12 in an overweight group (<b>OG</b>), and 8 in a lean group (<b>LG</b>). The<b>OG</b>was divided in two subgroups (<i>n</i>= 6, each): control (<b>CSG</b>) and experimental (<b>ESG</b>). The<b>ESG</b>underwent a 6-day CCP at week 2, while 5 volunteers in the<b>CSG</b>underwent it at week 9.<i>Main results.</i>Pre/post-CCP mean values for the variables in the<b>OG</b>were: PBFM (34.3/31.3%), CRP (3.7/0.6 mg dl<sup>-1</sup>), PhA (6.9/7.5°) and IR*10 (0.78/0.77). Calculated<i>R</i><sup>2</sup>correlation factors among these variables are all above 0.89. The favourable changes first seen in the<b>ESG</b>were still present 8 weeks after the CCP.<i>Significance.</i>(a) the CCP drastically lowers meta-inflammation, (b) EBIS can be used to measure metainflammation, before and after treatment, (c) for microbiota modulation, CCP could be a good alternative to more drastic procedures like faecal microbiota transplantation; (d) reestablishing eubiosis by CCP could be an effective coadjutant in the treatment of overweight young adult women.</p>","PeriodicalId":20047,"journal":{"name":"Physiological measurement","volume":" ","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-05-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140860107","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Quantitative validation of the suprasternal pressure signal to assess respiratory effort during sleep. 对胸骨上压力信号进行定量验证,以评估睡眠时的呼吸强度。
IF 3.2 4区 医学 Q3 BIOPHYSICS Pub Date : 2024-05-29 DOI: 10.1088/1361-6579/ad4c35
Luca Cerina, Gabriele B Papini, Pedro Fonseca, Sebastiaan Overeem, Johannes P van Dijk, Fokke van Meulen, Rik Vullings

Objective.Intra-esophageal pressure (Pes) measurement is the recommended gold standard to quantify respiratory effort during sleep, but used to limited extent in clinical practice due to multiple practical drawbacks. Respiratory inductance plethysmography belts (RIP) in conjunction with oronasal airflow are the accepted substitute in polysomnographic systems (PSG) thanks to a better usability, although they are partial views on tidal volume and flow rather than true respiratory effort and are often used without calibration. In their place, the pressure variations measured non-invasively at the suprasternal notch (SSP) may provide a better measure of effort. However, this type of sensor has been validated only for respiratory events in the context of obstructive sleep apnea syndrome (OSA). We aim to provide an extensive verification of the suprasternal pressure signal against RIP belts and Pes, covering both normal breathing and respiratory events.Approach.We simultaneously acquired suprasternal (207) and esophageal pressure (20) signals along with RIP belts during a clinical PSG of 207 participants. In each signal, we detected breaths with a custom algorithm, and evaluated the SSP in terms of detection quality, breathing rate estimation, and similarity of breathing patterns against RIP and Pes. Additionally, we examined how the SSP signal may diverge from RIP and Pes in presence of respiratory events scored by a sleep technician.Main results.The SSP signal proved to be a reliable substitute for both esophageal pressure (Pes) and respiratory inductance plethysmography (RIP) in terms of breath detection, with sensitivity and positive predictive value exceeding 75%, and low error in breathing rate estimation. The SSP was also consistent with Pes (correlation of 0.72, similarity 80.8%) in patterns of increasing pressure amplitude that are common in OSA.Significance.This work provides a quantitative analysis of suprasternal pressure sensors for respiratory effort measurements.

客观食道内压(Pes)测量是量化睡眠时呼吸强度的黄金标准,但由于存在多种实际缺陷,在临床实践中的应用非常有限。呼吸电感 胸廓描记带 (RIP) 与口鼻气流相结合,因其更好的实用性而成为多导睡眠图系统 (PSG) 中公认的 替代品,尽管 它们只是对潮气量和流量的部分观察,而不是真实的呼吸努力,而且 通常未经校准就使用。取而代之的是,在胸骨上切迹(SSP)处无创测量的压力变化可以更好地测量呼吸强度。然而,这种传感器仅在阻塞性睡眠呼吸暂停综合症(OSA)的呼吸事件中得到验证。我们的目标是对胸骨上压力信号与 RIP 腰带和 Pes 进行广泛验证,涵盖正常呼吸和呼吸事件。方法 在对 207 名参与者进行临床 PSG 时,我们同时采集了胸骨上压力信号(207 个)和食管压力信号(20 个)以及 RIP 腰带信号 。在每个信号中,我们使用定制算法检测呼吸,并从检测质量、呼吸频率 估计以及呼吸模式与 RIP 和 Pes 的相似性等方面对 SSP 进行评估。此外,我们还研究了在睡眠技师对呼吸事件进行评分的情况下,SSP 信号与 RIP 和 Pes 信号的差异。主要结果 在呼吸检测方面,SSP 信号被证明 是食管压力(Pes)和呼吸电感 胸透(RIP)的可靠替代品,灵敏度和阳性 预测值超过 75%,呼吸频率估计误差小。SSP与Pes(相关性为0.72,相似性为80.8%)在OSA常见的压力振幅增大模式上也是一致的。意义 本研究对胸骨上压力传感器的呼吸强度测量进行了定量分析。
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引用次数: 0
Finger photopletysmography detects early acute blood loss in compensated blood donors: a pilot study. 手指光敏血流图检测代偿期献血者的早期急性失血:一项试点研究。
IF 3.2 4区 医学 Q3 BIOPHYSICS Pub Date : 2024-05-28 DOI: 10.1088/1361-6579/ad4c54
Gerardo Speroni, Patricia Antedoro, Silvia Marturet, Gabriela Martino, Celia Chavez, Cristian Hidalgo, María V Villacorta, Ivo Ahrtz, Manuel Casadei, Nora Fuentes, Peter Kremeier, Stephan H Böhm, Gerardo Tusman

Objective.Diagnosis of incipient acute hypovolemia is challenging as vital signs are typically normal and patients remain asymptomatic at early stages. The early identification of this entity would affect patients' outcome if physicians were able to treat it precociously. Thus, the development of a noninvasive, continuous bedside monitoring tool to detect occult hypovolemia before patients become hemodynamically unstable is clinically relevant. We hypothesize that pulse oximeter's alternant (AC) and continuous (DC) components of the infrared light are sensitive to acute and small changes in patient's volemia. We aimed to test this hypothesis in a cohort of healthy blood donors as a model of slight hypovolemia.Approach.We planned to prospectively study blood donor volunteers removing 450 ml of blood in supine position. Noninvasive arterial blood pressure, heart rate, and finger pulse oximetry were recorded. Data was analyzed before donation, after donation and during blood auto-transfusion generated by the passive leg-rising (PLR) maneuver.Main results.Sixty-six volunteers (44% women) accomplished the protocol successfully. No clinical symptoms of hypovolemia, arterial hypotension (systolic pressure < 90 mmHg), brady-tachycardia (heart rate <60 and >100 beats-per-minute) or hypoxemia (SpO2< 90%) were observed during donation. The AC signal before donation (median 0.21 and interquartile range 0.17 a.u.) increased after donation [0.26(0.19) a.u;p< 0.001]. The DC signal before donation [94.05(3.63) a.u] increased after blood extraction [94.65(3.49) a.u;p< 0.001]. When the legs' blood was auto-transfused during the PLR, the AC [0.21(0.13) a.u.;p= 0.54] and the DC [94.25(3.94) a.u.;p= 0.19] returned to pre-donation levels.Significance.The AC and DC components of finger pulse oximetry changed during blood donation in asymptomatic volunteers. The continuous monitoring of these signals could be helpful in detecting occult acute hypovolemia. New pulse oximeters should be developed combining the AC/DC signals with a functional hemodynamic monitoring of fluid responsiveness to define which patient needs fluid administration.

目的:由于生命体征通常正常,而且患者在早期阶段仍无症状,因此诊断初发急性低血容量症具有挑战性。如果医生能够及早治疗,早期发现这种情况将影响患者的预后。因此,开发一种无创、连续的床旁监测工具,在患者血流动力学不稳定之前检测出隐性低血容量,具有重要的临床意义。我们假设脉搏血氧仪红外光的交替(AC)和连续(DC)分量对患者血容量的急性微小变化非常敏感。我们的目的是在健康献血者群体中测试这一假设,将其作为轻微低血容量模型:我们计划对献血志愿者进行前瞻性研究,让他们在仰卧姿势下抽取 450 毫升血液。记录无创动脉血压、心率和手指脉搏氧饱和度。对献血前、献血后以及通过被动抬腿动作进行自动输血时的数据进行分析:主要结果:66 名志愿者(44% 为女性)成功完成了方案。没有出现低血容量、动脉低血压(收缩压 100 次/分)或低氧血症(SpO2
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引用次数: 0
ECG-Image-Kit: a synthetic image generation toolbox to facilitate deep learning-based electrocardiogram digitization ECG-Image-Kit:促进基于深度学习的心电图数字化的合成图像生成工具箱
IF 3.2 4区 医学 Q3 BIOPHYSICS Pub Date : 2024-05-27 DOI: 10.1088/1361-6579/ad4954
Kshama Kodthalu Shivashankara, Deepanshi, Afagh Mehri Shervedani, Gari D Clifford, Matthew A Reyna and Reza Sameni
Objective. Cardiovascular diseases are a major cause of mortality globally, and electrocardiograms (ECGs) are crucial for diagnosing them. Traditionally, ECGs are stored in printed formats. However, these printouts, even when scanned, are incompatible with advanced ECG diagnosis software that require time-series data. Digitizing ECG images is vital for training machine learning models in ECG diagnosis, leveraging the extensive global archives collected over decades. Deep learning models for image processing are promising in this regard, although the lack of clinical ECG archives with reference time-series data is challenging. Data augmentation techniques using realistic generative data models provide a solution. Approach. We introduce ECG-Image-Kit, an open-source toolbox for generating synthetic multi-lead ECG images with realistic artifacts from time-series data, aimed at automating the conversion of scanned ECG images to ECG data points. The tool synthesizes ECG images from real time-series data, applying distortions like text artifacts, wrinkles, and creases on a standard ECG paper background. Main results. As a case study, we used ECG-Image-Kit to create a dataset of 21 801 ECG images from the PhysioNet QT database. We developed and trained a combination of a traditional computer vision and deep neural network model on this dataset to convert synthetic images into time-series data for evaluation. We assessed digitization quality by calculating the signal-to-noise ratio and compared clinical parameters like QRS width, RR, and QT intervals recovered from this pipeline, with the ground truth extracted from ECG time-series. The results show that this deep learning pipeline accurately digitizes paper ECGs, maintaining clinical parameters, and highlights a generative approach to digitization. Significance. The toolbox has broad applications, including model development for ECG image digitization and classification. The toolbox currently supports data augmentation for the 2024 PhysioNet Challenge, focusing on digitizing and classifying paper ECG images.
目的。心血管疾病是全球死亡的主要原因,而心电图(ECG)是诊断心血管疾病的关键。传统上,心电图以打印格式存储。然而,这些打印输出即使经过扫描,也无法与需要时间序列数据的高级心电图诊断软件兼容。心电图图像数字化对于利用数十年来收集的大量全球档案来训练心电图诊断中的机器学习模型至关重要。用于图像处理的深度学习模型在这方面大有可为,尽管缺乏具有参考时间序列数据的临床心电图档案是一项挑战。使用现实生成数据模型的数据增强技术提供了一种解决方案。方法。我们介绍的 ECG-Image-Kit 是一个开源工具箱,用于从时间序列数据生成具有逼真伪影的合成多导联心电图图像,旨在将扫描心电图图像自动转换为心电图数据点。该工具根据真实的时间序列数据合成心电图图像,在标准心电图纸背景上应用文字伪影、皱纹和折痕等变形。主要结果作为案例研究,我们使用 ECG-Image-Kit 从 PhysioNet QT 数据库中创建了一个包含 21 801 张心电图图像的数据集。我们在该数据集上开发并训练了一个传统计算机视觉与深度神经网络相结合的模型,将合成图像转换为时间序列数据进行评估。我们通过计算信噪比来评估数字化质量,并将该管道恢复的 QRS 宽度、RR 和 QT 间期等临床参数与从心电图时间序列中提取的基本事实进行比较。结果表明,该深度学习管道能准确数字化纸质心电图,同时保持临床参数,并突出了数字化的生成方法。意义重大。该工具箱应用广泛,包括心电图图像数字化和分类的模型开发。该工具箱目前支持 2024 PhysioNet 挑战赛的数据扩增,重点关注纸质心电图图像的数字化和分类。
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引用次数: 0
Myocardial infarction detection method based on the continuous T-wave area feature and multi-lead-fusion deep features. 基于连续 T 波区域特征和多导联融合深度特征的心肌梗塞检测方法
IF 3.2 4区 医学 Q3 BIOPHYSICS Pub Date : 2024-05-24 DOI: 10.1088/1361-6579/ad46e1
Mingfeng Jiang, Feibiao Bian, Jucheng Zhang, Tianhai Huang, Ling Xia, Yonghua Chu, Zhikang Wang, Jun Jiang

Objective.Myocardial infarction (MI) is one of the most threatening cardiovascular diseases. This paper aims to explore a method for using an algorithm to autonomously classify MI based on the electrocardiogram (ECG).Approach.A detection method of MI that fuses continuous T-wave area (C_TWA) feature and ECG deep features is proposed. This method consists of three main parts: (1) The onset of MI is often accompanied by changes in the shape of the T-wave in the ECG, thus the area of the T-wave displayed on different heartbeats will be quite different. The adaptive sliding window method is used to detect the start and end of the T-wave, and calculate the C_TWA on the same ECG record. Additionally, the coefficient of variation of C_TWA is defined as the C_TWA feature of the ECG. (2) The multi lead fusion convolutional neural network was implemented to extract the deep features of the ECG. (3) The C_TWA feature and deep features of the ECG were fused by soft attention, and then inputted into the multi-layer perceptron to obtain the detection result.Main results.According to the inter-patient paradigm, the proposed method reached a 97.67% accuracy, 96.59% precision, and 98.96% recall on the PTB dataset, as well as reached 93.15% accuracy, 93.20% precision, and 95.14% recall on the clinical dataset.Significance.This method accurately extracts the feature of the C_TWA, and combines the deep features of the signal, thereby improving the detection accuracy and achieving favorable results on clinical datasets.

目的:心肌梗塞(MI)是威胁最大的心血管疾病之一。本文旨在探索一种基于心电图(ECG)的自主心肌梗死分类算法:方法:本文提出了一种融合连续 T 波区域(C_TWA)特征和心电图深度特征的心肌梗死检测方法。该方法主要由三部分组成:(1)心肌梗死的发生往往伴随着心电图中 T 波形状的变化,因此不同心搏所显示的 T 波区域会有很大差异。自适应滑动窗口法用于检测 T 波的起始和终止,并计算同一心电图记录上的 C_TWA。此外,C_TWA 的变异系数 (CV) 被定义为心电图的 C_TWA 特征。(2) 采用多导联融合卷积神经网络(Multi-lead-fusion CNN)提取心电图的深层特征。(3) 通过软关注融合心电图的 C_TWA 特征和深层特征,然后输入多层感知器,得到检测结果:根据患者间范例,提出的方法在 PTB 数据集上达到了 97.67% 的准确率、96.59% 的精确率和 98.96% 的召回率,而提出的方法在临床数据集上达到了 93.15% 的准确率、93.20% 的精确率和 95.14% 的召回率:意义:所提出的方法准确提取了C_TWA的特征,并结合了信号的深层特征,从而提高了检测精度,在临床数据集上取得了理想的效果。
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Physiological measurement
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