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The transcription factor CitPH4 regulates plant defense-related metabolite biosynthesis in citrus.
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-02-07 DOI: 10.1093/plphys/kiaf027
Zhihao Lu, Bin Hu, Jiaxian He, Tao Yuan, Qinchun Wu, Kun Yang, Weikang Zheng, Yue Huang, Yuantao Xu, Xia Wang, Qiang Xu

Wild citrus (Citrus L.) exhibits high disease resistance accompanied by high-acidity fruit, whereas cultivated citrus produces tastier fruit but is more susceptible to disease. This is a common phenomenon, but the underlying molecular mechanisms remain unknown. Citrus PH4 (CitPH4) is a key transcription factor promoting citric acid accumulation in fruits. Accordingly, CitPH4 expression decreased during citrus domestication, along with a reduction in citric acid levels. Here, we demonstrate that a CitPH4-knockout mutant exhibits an acidless phenotype and displays substantially lower resistance to citrus diseases. Metabolome and transcriptome analyses of CitPH4-overexpressing citrus callus, Arabidopsis, and CitPH4-knockout citrus fruits revealed that quercetin, pipecolic acid (Pip), and N-hydroxypipecolic acid (NHP) are pivotal defense-related metabolites. Application of quercetin and Pip inhibited the growth of Xcc and Penicillium italicum, while NHP inhibited the growth of P. italicum and Huanglongbing. Biochemical experiments demonstrated that CitPH4 enhances the expression of quercetin and NHP biosynthesis genes by binding to their promoters. Moreover, Pip and quercetin contents were positively associated with citric acid content in the pulp of fruits from natural citrus populations. Finally, the heterologous expression of CitPH4 in Arabidopsis promoted the expression of stress response genes and enhanced its resistance to the fungal pathogen Botrytis cinerea. The overexpression of CitPH4 in tobacco (Nicotiana tabacum) enhanced disease resistance. This study reveals the mechanism by which CitPH4 regulates disease resistance and fruit acidity, providing a conceptual strategy to control fruit acidity and resistance to devastating diseases.

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引用次数: 0
Correction to: The transcriptional integration of environmental cues with root cell type development. 更正:环境线索与根细胞类型发育的转录整合
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-02-07 DOI: 10.1093/plphys/kiaf028
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引用次数: 0
Mixed-planting: A useful tool to build climate-resilient forests.
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-02-07 DOI: 10.1093/plphys/kiaf051
Hannah M McMillan
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引用次数: 0
Plant response to intermittent heat stress involves modulation of mRNA translation efficiency. 植物对间歇性热胁迫的反应涉及 mRNA 翻译效率的调节。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-02-07 DOI: 10.1093/plphys/kiae648
Arnaud Dannfald, Marie-Christine Carpentier, Rémy Merret, Jean-Jacques Favory, Jean-Marc Deragon

Acquired thermotolerance (also known as priming) is the ability of cells or organisms to survive acute heat stress if preceded by a milder one. In plants, acquired thermotolerance has been studied mainly at the transcriptional level, including recent descriptions of sophisticated regulatory circuits that are essential for this learning capacity. Here, we tested the involvement of polysome-related processes [translation and cotranslational mRNA decay (CTRD)] in Arabidopsis (Arabidopsis thaliana) thermotolerance using two heat stress regimes with and without a priming event. We found that priming is essential to restore the general translational potential of plants shortly after acute heat stress. We observed that mRNAs not involved in heat stress suffered from reduced translation efficiency at high temperatures, whereas heat stress-related mRNAs were translated more efficiently under the same condition. We also showed that the induction of the unfolded protein response (UPR) pathway in acute heat stress is favored by a previous priming event and that, in the absence of priming, ER-translated mRNAs become preferential targets of CTRD. Finally, we present evidence that CTRD can specifically regulate more than a thousand genes during heat stress and should be considered as an independent gene regulatory mechanism.

获得性耐热性(也称为 "启蒙")是指细胞或生物体在受到较温和的急性热应激后存活下来的能力。对植物获得性耐热性的研究主要集中在转录水平,包括最近对这种学习能力所必需的复杂调控回路的描述。在这里,我们利用有引物事件和无引物事件的两种热胁迫机制,测试了多聚体相关过程(翻译和共翻译 mRNA 衰变(CTRD))在拟南芥(Arabidopsis thaliana)耐热性中的参与情况。我们发现,在急性热胁迫后不久,启动对恢复植物的总体翻译潜力至关重要。我们观察到,在高温条件下,与热胁迫无关的 mRNA 翻译效率降低,而与热胁迫相关的 mRNA 翻译效率更高。我们还发现,在急性热应激中,未折叠蛋白反应(UPR)途径的诱导受先前引物事件的影响,而在没有引物的情况下,ER 转录的 mRNA 会成为 CTRD 的首选靶标。最后,我们提出的证据表明,CTRD 可在热应激期间特异性调控一千多个基因,应被视为一种独立的基因调控机制。
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引用次数: 0
Advancing our understanding of root development: Technologies and insights from diverse studies. 促进我们对根系发育的理解:来自不同研究的技术和见解。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-02-07 DOI: 10.1093/plphys/kiae605
Núria S Coll, Miguel Moreno-Risueno, Lucia C Strader, Alexandra V Goodnight, Rosangela Sozzani

Understanding root development is critical for enhancing plant growth and health, and advanced technologies are essential for unraveling the complexities of these processes. In this review, we highlight select technological innovations in the study of root development, with a focus on the transformative impact of single-cell gene expression analysis. We provide a high-level overview of recent advancements, illustrating how single-cell RNA sequencing (scRNA-seq) has become a pivotal tool in plant biology. scRNA-seq has revolutionized root biology by enabling detailed, cell-specific analysis of gene expression. This has allowed researchers to create comprehensive root atlases, predict cell development, and map gene regulatory networks (GRNs) with unprecedented precision. Complementary technologies, such as multimodal profiling and bioinformatics, further enrich our understanding of cellular dynamics and gene interactions. Innovations in imaging and modeling, combined with genetic tools like CRISPR, continue to deepen our knowledge of root formation and function. Moreover, the integration of these technologies with advanced biosensors and microfluidic devices has advanced our ability to study plant-microbe interactions and phytohormone signaling at high resolution. These tools collectively provide a more comprehensive understanding of root system architecture and its regulation by environmental factors. As these technologies evolve, they promise to drive further breakthroughs in plant science, with substantial implications for agriculture and sustainability.

了解根系发育对于促进植物生长和健康至关重要,而先进的技术对于揭示这些过程的复杂性至关重要。在这篇综述中,我们将重点介绍根系发育研究中的部分技术创新,尤其是单细胞基因表达分析的变革性影响。我们对最近的进展进行了高层次的概述,说明了单细胞 RNA 测序(scRNA-seq)是如何成为植物生物学的关键工具的。scRNA-seq 通过对基因表达进行详细的特异性细胞分析,彻底改变了根生物学。这使得研究人员能够创建全面的根图谱,预测细胞发育,并以前所未有的精度绘制基因调控网络(GRN)。多模态分析和生物信息学等补充技术进一步丰富了我们对细胞动态和基因相互作用的了解。成像和建模方面的创新与 CRISPR 等遗传工具相结合,不断加深我们对根的形成和功能的了解。此外,将这些技术与先进的生物传感器和微流控装置相结合,还提高了我们以高分辨率研究植物与微生物相互作用和植物激素信号转导的能力。这些工具共同提供了对根系结构及其受环境因素调控的更全面了解。随着这些技术的发展,它们有望推动植物科学的进一步突破,对农业和可持续发展产生重大影响。
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引用次数: 0
The hexose transporters CsHT3 and CsHT16 regulate postphloem transport and fruit development in cucumber. 己糖转运体CsHT3和CsHT16调节黄瓜韧皮部后转运和果实发育。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-02-07 DOI: 10.1093/plphys/kiae597
Jintao Cheng, Suying Wen, Kexin Li, Yixuan Zhou, Mengtian Zhu, H Ekkehard Neuhaus, Zhilong Bie

Hexoses are essential for plant growth and fruit development. However, the precise roles of hexose/H+ symporters in postphloem sugar transport and cellular sugar homeostasis in rapidly growing fruits remain elusive. To elucidate the functions of hexose/H+ symporters in cucumber (Cucumis sativus L.) fruits, we conducted comprehensive analyses of their tissue-specific expression, localization, transport characteristics, and physiological functions. Our results demonstrate that CsHT3 (C. sativus hexose transporter), CsHT12, and CsHT16 are the primary hexose/H+ symporters expressed in cucumber fruits. CsHT3 and CsHT16 are localized in the sieve element-companion cell during the ovary and early fruit development stages. As the fruit develops and expands, the expression of both symporters shifts to phloem parenchyma cells. The CsHT16 knockout mutant produces shorter fruits with a larger circumference, likely due to impaired sugar and phytohormone homeostasis. Concurrent reduction of CsHT3, CsHT12, and CsHT16 expression leads to decreased fruit size. Conversely, CsHT3 overexpression results in increased fruit size and higher fruit sugar levels. These findings suggest that CsHT16 plays an important role in maintaining sugar homeostasis, which shapes the fruit, while CsHT3, CsHT12, and CsHT16 collectively regulate the supply of carbohydrates required for cucumber fruit enlargement.

己糖是植物生长和果实发育所必需的。然而,在快速生长的果实中,己糖/H+同调体在韧皮部后糖运输和细胞糖稳态中的确切作用尚不清楚。为了阐明己糖/H+同调体在黄瓜果实中的功能,我们对其组织特异性表达、定位、转运特性和生理功能进行了综合分析。结果表明,CsHT3 (C. sativus己糖转运蛋白)、CsHT12和CsHT16是黄瓜果实中表达的主要己糖/H+同调蛋白。CsHT3和CsHT16定位于子房和果实早期发育阶段的筛元-伴细胞。随着果实的发育和膨胀,这两种同体细胞的表达转移到韧皮部薄壁细胞。CsHT16基因敲除突变体产生的果实更短,周长更大,可能是由于糖和植物激素稳态受损。CsHT3、CsHT12和CsHT16同时表达减少导致果实大小减小。相反,CsHT3过表达会导致果实尺寸增大和含糖量升高。这些发现表明,CsHT16在维持糖稳态中起重要作用,而CsHT3、CsHT12和CsHT16共同调节黄瓜果实膨大所需的碳水化合物供应。
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引用次数: 0
Hot to Go: The impact of protein nitrosylation on plant fertility. 热去:蛋白质亚硝基化对植物肥力的影响。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-02-07 DOI: 10.1093/plphys/kiaf011
Anna Moseler
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引用次数: 0
Correction to: Biotic and Abiotic Stimulation of Root Epidermal Cells Reveals Common and Specific Responses to Arbuscular Mycorrhizal Fungi. 更正:根表皮细胞的生物和非生物刺激揭示了对丛枝菌根真菌的共性和特异性反应
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-02-07 DOI: 10.1093/plphys/kiaf060
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引用次数: 0
Mechanistic effects of lipid binding pockets within soluble signaling proteins: lessons from acyl-CoA-binding and START-domain-containing proteins. 可溶性信号蛋白中脂质结合口袋的机制效应:从酰基-CoA 结合蛋白和含 START 域蛋白中汲取的教训
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-02-07 DOI: 10.1093/plphys/kiae565
Shiu-Cheung Lung, Mee-Len Chye

While lipids serve as important energy reserves, metabolites, and cellular constituents in all forms of life, these macromolecules also function as unique carriers of information in plant communication given their diverse chemical structures. The signal transduction process involves a sophisticated interplay between messengers, receptors, signal transducers, and downstream effectors. Over the years, an array of plant signaling proteins have been identified for their crucial roles in perceiving lipid signals. However, the mechanistic effects of lipid binding on protein functions remain largely elusive. Recent literature has presented numerous fascinating models that illustrate the significance of protein-lipid interactions in mediating signaling responses. This review focuses on the category of lipophilic signaling proteins that encompass a hydrophobic binding pocket located outside of cellular membranes and provides an update on the lessons learned from two of these structures, namely the acyl-CoA-binding and steroidogenic acute regulatory protein-related lipid transfer domains. It begins with a brief overview of the latest advances in understanding the functions of the two protein families in plant communication. The second part highlights five functional mechanisms of lipid ligands in concert with their target signaling proteins.

脂质在所有生命形式中都是重要的能量储备、代谢物和细胞成分,而由于其化学结构的多样性,这些大分子在植物通讯中也是独特的信息载体。信号转导过程涉及信使、受体、信号转换器和下游效应器之间复杂的相互作用。多年来,一系列植物信号蛋白因其在感知脂质信号中的关键作用而被发现。然而,脂质结合对蛋白质功能的机理影响在很大程度上仍然难以捉摸。最近的文献提出了许多引人入胜的模型,说明了蛋白质-脂质相互作用在介导信号反应中的重要作用。本综述将重点放在亲脂信号蛋白的类别上,这类蛋白包含一个位于细胞膜外的疏水结合袋,并提供了从其中两种结构(即酰基-CoA 结合结构域和 START 结构域)中吸取的最新经验教训。报告首先简要概述了在了解这两个蛋白家族在植物通讯中的功能方面取得的最新进展。第二部分重点介绍了脂质配体与其目标信号蛋白协同作用的五种功能机制。
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引用次数: 0
The H2S-responsive transcription factor ERF.D3 regulates tomato abscisic acid metabolism, leaf senescence, and fruit ripening. H2S反应性转录因子ERF.D3调控番茄赤霉酸代谢、叶片衰老和果实成熟。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-02-07 DOI: 10.1093/plphys/kiae560
Kangdi Hu, Meihui Geng, Lin Ma, Gaifang Yao, Min Zhang, Hua Zhang

Hydrogen sulfide (H2S) is a signaling molecule that regulates plant senescence. In this study, we found that H2S delays dark-induced senescence in tomato (Solanum lycopersicum) leaves. Transcriptome and reverse transcription quantitative PCR (RT-qPCR) analyses revealed an ethylene response factor ERF.D3 is quickly induced by H2S. H2S also persulfidated ERF.D3 at amino acid residues C115 and C118. CRISPR/Cas9-mediated gene editing, and gene overexpression analyses showed that ERF.D3 negatively regulates leaf senescence and fruit ripening. Abscisic acid (ABA) levels were reduced by ERF.D3 overexpression, suggesting ERF.D3 might regulate ABA metabolism. Additionally, the ABA 8'-hydroxylase-encoding gene CYP707A2, which is required for ABA degradation, was identified as an ERF.D3 target gene through transcriptome data, RT-qPCR, dual-luciferase reporter assays, and electrophoretic mobility shift assays. ERF.D3 persulfidation enhanced its transcriptional activity toward CYP707A2. Moreover, the E3 ligase RNF217 ubiquitinated ERF.D3, which may accelerate fruit ripening during the late stage of fruit development. Overall, our study provides valuable insights into the roles of a H2S-responsive ERF.D3 and its persulfidation state in delaying leaf senescence and fruit ripening and provides a link between H2S and ABA degradation.

硫化氢(H2S)是一种调节植物衰老的信号分子。在这项研究中,我们发现 H2S 能延缓番茄(Solanum lycopersicum)叶片在黑暗诱导下的衰老。转录组和 RT-qPCR 分析显示,乙烯反应因子 ERF.D3 被 H2S 快速诱导。H2S 还使 ERF.D3 的氨基酸残基 C115 和 C118 发生过硫化。CRISPR/Cas9 介导的基因编辑和基因过表达分析表明,ERF.D3 负向调节叶片衰老和果实成熟。ERF.D3的过表达降低了脱落酸(ABA)水平,表明ERF.D3可能调节ABA代谢。此外,通过转录组数据、RT-qPCR、双荧光素酶报告实验和电泳迁移实验,发现脱落酸 8'-羟化酶编码基因 CYP707A2 是 ERF.D3 的靶基因,该基因是 ABA 降解所必需的。ERF.D3 的过硫化作用增强了其对 CYP707A2 的转录活性。此外,E3 连接酶 RNF217 泛素化 ERF.D3,这可能会加速果实发育后期的成熟。总之,我们的研究为了解 H2S 响应性 ERF.D3 及其过硫化状态在延迟叶片衰老和果实成熟中的作用提供了宝贵的见解,并提供了 H2S 与 ABA 降解之间的联系。
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Plant Physiology
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