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Co-translational import of nuclear-encoded proteins into the chloroplast in Chlamydomonas reinhardtii. 将核编码蛋白共翻译导入衣藻叶绿体。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-02 DOI: 10.1093/plphys/kiae310
Kumari Billakurthi, Naresh Loudya
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引用次数: 0
Which ring is the ring? Insights from a study on maize circRNAs under drought stress. 哪个环是环?干旱胁迫下玉米 circRNA 研究的启示。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-02 DOI: 10.1093/plphys/kiae265
Chong Teng
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引用次数: 0
P4B: A novel probe to study cellulose synthesis and microtubule dynamics. P4B:研究纤维素合成和微管动力学的新型探针。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-02 DOI: 10.1093/plphys/kiae305
Nicola Trozzi
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引用次数: 0
Partner-switching components PmgA and Ssr1600 regulate high-light acclimation in Synechocystis sp. PCC 6803. 伴侣转换元件 PmgA 和 Ssr1600 调节 Synechocystis sp.
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-02 DOI: 10.1093/plphys/kiae323
Riku Nakamura, Yuji Takahashi, Shogo Tachibana, Arisa Terada, Kakeru Suzuki, Kumika Kondo, Yuzuru Tozawa, Yukako Hihara

Photomixotrophic growth A (PmgA) is a pleiotropic regulator essential for growth under photomixotrophic and prolonged high-light (HL) conditions in the cyanobacterium Synechocystis sp. PCC 6803. The overall similarity with the antisigma factor of the bacterial partner-switching system indicates that PmgA exerts a regulatory function via phosphorylation of its target proteins. In this study, we performed an in vitro phosphorylation assay and protein-protein interaction analysis and found that PmgA interacts with 4 antisigma antagonist homologs, Ssr1600, Slr1856, Slr1859, and Slr1912, but specifically phosphorylates Ssr1600. Phenotypic analyses using the set of gene disruption and overexpression strains of pmgA and ssr1600 revealed that phosphorylation by PmgA is essential for the accumulation of Ssr1600 protein in vivo. The ssr1600-disrupted mutant showed similar phenotypes as those previously reported for the pmgA-disrupted mutant, namely, no obvious phenotype just after the shift to HL, but higher chlorophyll content, 5-aminolevulinic acid synthesis activity, and psaAB transcript levels than those in the wild type after 6 h. These findings indicate that the phosphorylated form of Ssr1600 works as the output of the partner-switching system to coordinately repress chlorophyll biosynthesis and accumulation of photosystem I during HL acclimation.

光异养生长 A(PmgA)是蓝藻 Synechocystis sp. PCC 6803 在光异养和长期高光(HL)条件下生长所必需的一种多向调节因子。PmgA 与细菌伙伴转换系统中的反σ因子总体相似,这表明 PmgA 是通过磷酸化其目标蛋白来发挥调控功能的。在本研究中,我们进行了体外磷酸化试验和蛋白质-蛋白质相互作用分析,发现 PmgA 与四种反σ拮抗剂同源物 Ssr1600、Slr1856、Slr1859 和 Slr1912 相互作用,但对 Ssr1600 具有特异性磷酸化作用。利用一组 pmgA 和 ssr1600 基因中断和过表达菌株进行的表型分析表明,PmgA 磷酸化对 Ssr1600 蛋白在体内的积累至关重要。ssr1600断裂突变体表现出与之前报道的pmgA断裂突变体相似的表型,即刚转移到HL后没有明显的表型,但6小时后叶绿素含量、5-氨基乙酰丙酸合成活性和psaAB转录本水平均高于野生型。这些研究结果表明,Ssr1600 的磷酸化形式作为伙伴切换系统的输出,在高光照适应过程中协调地抑制叶绿素的生物合成和光系统 I 的积累。
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引用次数: 0
Kinase CPK10 regulates low light-induced tomato flower drop downstream of IDL6 in a calcium-dependent manner. 激酶 CPK10 以钙依赖方式调控弱光诱导的番茄落花(IDL6 的下游)。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-02 DOI: 10.1093/plphys/kiae406
Xin Fu, Ruizhen Li, Xianfeng Liu, Lina Cheng, Siqi Ge, Sai Wang, Yue Cai, Tong Zhang, Chun-Lin Shi, Sida Meng, Changhua Tan, Cai-Zhong Jiang, Tianlai Li, Mingfang Qi, Tao Xu

Flower drop is a major cause for yield loss in many crops. Previously, we found that tomato (Solanum lycopersicum) INFLORESCENCE DEFICIENT IN ABSCISSION-Like (SlIDL6) contributes to flower drop induced by low light. However, the molecular mechanisms by which SlIDL6 acts as a signal to regulate low light-induced abscission remain unclear. In this study, SlIDL6 was found to elevate cytosolic Ca2+ concentrations ([Ca2+]cyt) in the abscission zone (AZ), which was required for SlIDL6-induced flower drop under low light. We further identified that one calcium-dependent protein kinase gene (SlCPK10) was highly expressed in the AZ and up-regulated by SlIDL6-triggered [Ca2+]cyt. Over-expression and knockout of SlCPK10 in tomato resulted in accelerated and delayed abscission, respectively. Genetic evidence further indicated that knockout of SlCPK10 significantly impaired the function of SlIDL6 in accelerating abscission. Furthermore, Ser-371 phosphorylation in SlCPK10 dependent on SlIDL6 was necessary and sufficient for its function in regulating flower drop, probably by stabilizing the SlCPK10 proteins. Taken together, our findings reveal that SlCPK10, as a downstream component of the IDL6 signaling pathway, regulates flower drop in tomato under low light stress.

落花是许多作物减产的主要原因。此前,我们发现番茄(Solanum lycopersicum)的类退花因子(SlIDL6)会导致弱光诱导的落花。然而,SlIDL6 作为信号调节弱光诱导的脱落的分子机制仍不清楚。本研究发现,SlIDL6 能提高脱落区(AZ)的细胞膜 Ca2+ 浓度([Ca2+]cyt),而这是 SlIDL6 在弱光下诱导落花所必需的。我们进一步发现,一个钙依赖性蛋白激酶基因(SlCPK10)在脱落带中高表达,并在 SlIDL6 诱导的[Ca2+]cyt 作用下上调。在番茄中过度表达和敲除 SlCPK10 分别会导致加速和延迟脱落。遗传学证据进一步表明,敲除 SlCPK10 会显著削弱 SlIDL6 在加速脱落方面的功能。此外,SlCPK10中依赖于SlIDL6的Ser-371磷酸化是其调节落花功能的必要且充分条件,这可能是通过稳定SlCPK10蛋白实现的。综上所述,我们的研究结果表明,SlCPK10作为IDL6信号通路的下游成分,调节着番茄在弱光胁迫下的落花。
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引用次数: 0
The CsDof1.8-CsLIPOXYGENASE09 module regulates C9 aroma production in cucumber. CsDof1.8-CsLIPOXYGENASE09模块调控黄瓜C9香气的产生。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-02 DOI: 10.1093/plphys/kiae338
Yinhui Sun, Xuzhen Li, Hua Wang, Qiongzhi Zhang, Xin Wang, Yanan Jiao, Jie Zhang, Yuying Yang, Wanyu Xue, Yulei Qian, Xiaojiang Zhang, Ruochen Wang, Shuxia Chen

Nine-carbon aldehydes and their relative alcohols (C9 aromas) are the main aroma compounds of cucumber (Cucumis sativus L.) fruits and provide a unique cucumber-like note. However, the key regulators of C9 aroma accumulation in cucumber fruit are poorly characterized. Based on C9 aroma dynamic analysis and transcriptome analysis during fruit development of two different cucumber inbred lines, Q16 and Q24, Lipoxygenase09 (CsLOX09) was identified as a candidate gene for C9 aroma accumulation. Additionally, Q24 with higher CsLOX09 expression accumulated more C9 aromas than Q16. To verify the function of CsLOX09, Cslox09 homozygote knockout lines were created. C9 aroma content decreased by 80.79% to 99.16% in these mutants compared to the wild type. To further explore the reasons for the difference in CsLOX09 expression between Q16 and Q24 fruits, a co-expression network was constructed by integrating the C9 aroma-associated metabolism and transcriptomic data. Eighteen candidate transcription factors were highly correlated with the expression of CsLOX09. DNA binding with One Finger 1.8 (CsDof1.8) was confirmed to bind directly to the A/TAAAG motif of the CsLOX09 promoter through dual-luciferase, yeast one-hybrid, chromatin immunoprecipitation-qPCR and electrophoretic mobility shift assays. Furthermore, C9 aroma content and CsLOX09 expression were significantly increased in the CsDof1.8 overexpression lines. Overall, these data elucidate the metabolic regulation of C9 aromas in cucumber and provide a foundation for facilitating the regulation of flavor in cucumber breeding.

九碳醛类及其相对醇类(C9 香气)是黄瓜(Cucumis sativus L.)果实的主要香气化合物,具有独特的黄瓜香味。然而,黄瓜果实中 C9 香气积累的关键调控因子却鲜为人知。根据对两个不同黄瓜近交系 Q16 和 Q24 果实发育过程中的 C9 香气动态分析和转录组分析,脂氧合酶09(CsLOX09)被确定为 C9 香气积累的候选基因。此外,CsLOX09表达量较高的Q24比Q16积累了更多的C9香气。为了验证 CsLOX09 的功能,我们创建了 CsLOX09 基因同源剔除系。与野生型相比,这些突变体的 C9 香气含量减少了 80.79%-99.16%。为了进一步探索 Q16 和 Q24 果实中 CsLOX09 表达差异的原因,研究人员整合了 C9 香气相关代谢和转录组数据,构建了共表达网络。18 个候选转录因子与 CsLOX09 的表达高度相关。通过双荧光素酶、酵母单杂交、染色质免疫沉淀-qPCR和电泳迁移实验,证实了一指1.8(CsDof1.8)与CsLOX09启动子的A/TAAAG基序直接结合。此外,CsDof1.8过表达株中的C9香气含量和CsLOX09表达量显著增加。总之,这些数据阐明了黄瓜中 C9 香气的代谢调控,为促进黄瓜育种中的香气调控提供了基础。
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引用次数: 0
PpFab: An efficient promoter toolkit in Physcomitrium Patens. PpFab:Physcomitrium Patens 的高效启动子工具包。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-02 DOI: 10.1093/plphys/kiae332
Guangyu Luo, Hao Ye, Mengxuan Xu, Xiaofang Li, Jianxuan Zhu, Junbiao Dai
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引用次数: 0
A matter of quantity: The effect of chloroplast stromal phosphate levels on photosynthetic efficiency. 数量问题:叶绿体基质磷酸盐水平对光合效率的影响。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-02 DOI: 10.1093/plphys/kiae307
Pablo Ignacio Calzadilla
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引用次数: 0
Genotyping-by-sequencing-based high-resolution mapping reveals a single candidate gene for the grapevine veraison locus Ver1. 基于基因分型测序的高分辨率图谱揭示了葡萄变色基因座 Ver1 的单个候选基因。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-02 DOI: 10.1093/plphys/kiae272
Lena Frenzke, Franco Röckel, Torsten Wenke, Florian Schwander, Konrad Grützmann, Julia Naumann, Falk Zakrzewski, Tom Heinekamp, Maria Maglione, Anja Wenke, Anja Kögler, Eva Zyprian, Andreas Dahl, Franz Förster, Reinhard Töpfer, Stefan Wanke

Veraison marks the transition from berry growth to berry ripening and is a crucial phenological stage in grapevine (Vitis vinifera): the berries become soft and begin to accumulate sugars, aromatic substances, and, in red cultivars, anthocyanins for pigmentation, while the organic acid levels begin to decrease. These changes determine the potential quality of wine. However, rising global temperatures lead to earlier flowering and ripening, which strongly influence wine quality. Here, we combined genotyping-by-sequencing with a bioinformatics pipeline on ∼150 F1 genotypes derived from a cross between the early ripening variety "Calardis Musqué" and the late-ripening variety "Villard Blanc". Starting from 20,410 haplotype-based markers, we generated a high-density genetic map and performed a quantitative trait locus analysis based on phenotypic datasets evaluated over 20 yrs. Through locus-specific marker enrichment and recombinant screening of ∼1,000 additional genotypes, we refined the originally postulated 5-mb veraison locus, Ver1, on chromosome 16 to only 112 kb, allowing us to pinpoint the ethylene response factor VviERF027 (VCost.v3 gene ID: Vitvi16g00942, CRIBIv1 gene ID: VIT_16s0100g00400) as veraison candidate gene. Furthermore, the early veraison allele could be traced back to a clonal "Pinot" variant first mentioned in the seventeenth century. "Pinot Precoce Noir" passed this allele over "Madeleine Royale" to the maternal grandparent "Bacchus Weiss" and, ultimately, to the maternal parent "Calardis Musqué". Our findings are crucial for ripening time control, thereby improving wine quality, and for breeding grapevines adjusted to climate change scenarios that have a major impact on agro-ecosystems in altering crop plant phenology.

葡萄成熟期标志着浆果从生长到成熟的过渡,是葡萄(葡萄属)的一个重要物候阶段:浆果变得柔软,开始积累糖分和芳香物质,在红色葡萄品种中,花青素用于着色,同时有机酸含量开始下降。这些变化决定了葡萄酒的潜在品质。然而,全球气温升高导致花期和成熟期提前,这对葡萄酒的质量有很大影响。在这里,我们对早熟品种 "Calardis Musqué "和晚熟品种 "Villard Blanc "杂交产生的 150 个 F1 基因型进行了基因分型测序和生物信息学分析。从 20,410 个基于单倍型的标记开始,我们生成了一个高密度遗传图谱,并根据 20 多年来评估的表型数据集进行了定量性状位点分析。通过位点特异性标记富集和对 1000 个额外基因型的重组筛选,我们将最初推测的位于 16 号染色体上的 5 Mb veraison 位点 Ver1 细化到仅 112 kb,从而将乙烯反应因子(ERF)VviERF027(VCost.v3 基因 ID:Vitvi16g00942,CRIBIv1 基因 ID:VIT_16s0100g00400)确定为 veraison 候选基因。此外,早熟等位基因可追溯到 17 世纪首次提到的克隆 "黑皮诺 "变种。Pinot Precoce Noir "将这一等位基因通过 "Madeleine Royale "传给了外祖父 "Bacchus Weiss",并最终传给了母本 "Calardis Musqué"。我们的研究结果对于控制葡萄成熟时间,从而提高葡萄酒品质,以及培育适应气候变化的葡萄树都至关重要,因为气候变化对农业生态系统的影响很大,会改变作物的物候。
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引用次数: 0
RING/U-box E3 protein BIR1 interacts with and ubiquitinates barley growth repressor BROAD LEAF1. RING/U-box E3 蛋白 BIR1 与大麦生长抑制因子 BROAD LEAF1 相互作用并泛素化。
IF 6.5 1区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-02 DOI: 10.1093/plphys/kiae315
Ouad Soltani, Moritz Jöst, Iris Hoffie, Götz Hensel, Christian Kappel, Gali Prag, Sarah McKim, Jochen Kumlehn, Michael Lenhard

Establishment of final leaf size in plants relies on the precise regulation of 2 interconnected processes, cell division and cell expansion. The barley (Hordeum vulgare) protein BROAD LEAF1 (BLF1) limits cell proliferation and leaf growth in the width direction. However, how the levels of this potent repressor of leaf growth are controlled remains unclear. Here, we used a yeast 2-hybrid screen to identify the BLF1-INTERACTING RING/U-BOX 1 (BIR1) E3 ubiquitin ligase that interacts with BLF1 and confirmed the interaction of the 2 proteins in planta. Inhibiting the proteasome caused overaccumulation of a BLF1-eGFP fusion protein when co-expressed with BIR1, and an in vivo ubiquitination assay in bacteria confirmed that BIR1 can mediate ubiquitination of BLF1 protein. Consistent with regulation of endogenous BLF1 in barley by proteasomal degradation, inhibition of the proteasome in BLF1-vYFP-expressing barley plants caused an accumulation of the BLF1 protein. The BIR1 protein co-localized with BLF1 in nuclei and appeared to reduce BLF1 protein levels. Analysis of bir1-1 knockout mutants suggested the involvement of BIR1 in leaf growth control, although mainly on leaf length. Together, our results suggest that proteasomal degradation, in part mediated by BIR1, helps fine-tune BLF1 protein levels in barley.

植物最终叶片大小的确定取决于对细胞分裂和细胞扩张这两个相互关联过程的精确调控。大麦(Hordeum vulgare)蛋白质 BROAD LEAF1(BLF1)限制了细胞增殖和叶片在宽度方向上的生长。然而,这种叶片生长的强效抑制因子的水平是如何控制的仍不清楚。在这里,我们利用酵母双杂交筛选确定了与 BLF1 相互作用的 BLF1-INTERACTING RING/U-BOX 1 (BIR1) E3 泛素连接酶,并在植物体内证实了这两种蛋白的相互作用。抑制蛋白酶体会导致与 BIR1 共同表达的 BLF1-eGFP 融合蛋白过度积累,细菌体内泛素化试验证实 BIR1 能介导 BLF1 蛋白的泛素化。与大麦中内源 BLF1 受蛋白酶体降解的调控相一致,在表达 BLF1-vYFP 的大麦植株中抑制蛋白酶体会导致 BLF1 蛋白的积累。BIR1 蛋白与 BLF1 共同定位在细胞核中,似乎能降低 BLF1 蛋白水平。对bir1-1基因敲除突变体的分析表明,BIR1参与了叶片生长控制,但主要是叶片长度的控制。总之,我们的研究结果表明,蛋白酶体降解(部分由 BIR1 介导)有助于微调大麦中 BLF1 蛋白的水平。
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引用次数: 0
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Plant Physiology
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