首页 > 最新文献

Protoplasma最新文献

英文 中文
Correction to: Taxonomic implications of normal and abnormal stomatal complexes in Indigofera L. (Indigofereae, Faboideae, Fabaceae). 更正:Indigofera L. (Indigofereae, Faboideae, Fabaceae) 正常和异常气孔复合体的分类学意义。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-09-01 DOI: 10.1007/s00709-024-01974-7
Mohamed O Badry, Ahmed K Osman, Mostafa Aboulela, Shereen Gafar, Iman H Nour
{"title":"Correction to: Taxonomic implications of normal and abnormal stomatal complexes in Indigofera L. (Indigofereae, Faboideae, Fabaceae).","authors":"Mohamed O Badry, Ahmed K Osman, Mostafa Aboulela, Shereen Gafar, Iman H Nour","doi":"10.1007/s00709-024-01974-7","DOIUrl":"10.1007/s00709-024-01974-7","url":null,"abstract":"","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":"1023"},"PeriodicalIF":2.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11358174/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141875777","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A semi-quantitative histochemical method for assessment of biochemical responses to osmotic stress in Coffea arabica leaf disks. 评估阿拉伯咖啡叶盘对渗透胁迫的生化反应的半定量组织化学方法。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-03-11 DOI: 10.1007/s00709-024-01941-2
Nicolás De Palma, Arthur Germano Fett-Neto

A simple method set for assessing biochemical changes associated with osmotic stress responses was developed using coffee (Coffea arabica L.) leaf disks. Stress was induced by polyethylene glycol (PEG) exposure. Quantitative evaluation of tissue physiological stress parameters was carried out using analytical methods to validate the conversion of classic qualitative histochemical tests for localizing lipid peroxidation, hydrogen peroxide, and total xanthine alkaloids into semi-quantitative assays. Relative electrolyte leakage (EL%) and chlorophyll content (SPAD index) were also recorded. EL% levels of treated disks were higher than those of control ones, whereas SPAD indexes were comparable. Histochemical localization indicated that levels of lipid peroxidation, H2O2, and total xanthines were also higher under osmotic stress than in control conditions. Semi-quantitative data obtained by image processing of histochemical staining consistently matched quantitative evaluations. Chromatographic analyses revealed that theophylline and caffeine concentrations increased in the presence of PEG, whereas theobromine remained constant in relation to the control. The methods herein described can be useful to rapidly acquire initial data regarding biochemical osmotic stress responses in coffee tissues based on simple staining and imaging steps. Moreover, it is likely that the same method may be applicable to other types of stresses and plant species upon minor adjustments.

利用咖啡(Coffea arabica L.)叶盘开发了一套评估与渗透胁迫反应相关的生化变化的简单方法。通过聚乙二醇(PEG)暴露诱导胁迫。采用分析方法对组织生理应激参数进行定量评估,以验证将用于定位脂质过氧化、过氧化氢和总黄嘌呤生物碱的经典定性组织化学测试转换为半定量测定的有效性。此外,还记录了相对电解质渗漏率(EL%)和叶绿素含量(SPAD 指数)。经处理的磁盘的 EL% 水平高于对照磁盘,而 SPAD 指数相当。组织化学定位表明,在渗透胁迫条件下,脂质过氧化物、H2O2 和总黄嘌呤的水平也高于对照组。通过组织化学染色图像处理获得的半定量数据与定量评估结果一致。色谱分析显示,茶碱和咖啡因的浓度在 PEG 存在的情况下有所增加,而可可碱的浓度与对照组相比保持不变。本文所述的方法非常有用,可通过简单的染色和成像步骤快速获取有关咖啡组织生化渗透压反应的初步数据。此外,只要稍加调整,同样的方法也可能适用于其他类型的胁迫和植物物种。
{"title":"A semi-quantitative histochemical method for assessment of biochemical responses to osmotic stress in Coffea arabica leaf disks.","authors":"Nicolás De Palma, Arthur Germano Fett-Neto","doi":"10.1007/s00709-024-01941-2","DOIUrl":"10.1007/s00709-024-01941-2","url":null,"abstract":"<p><p>A simple method set for assessing biochemical changes associated with osmotic stress responses was developed using coffee (Coffea arabica L.) leaf disks. Stress was induced by polyethylene glycol (PEG) exposure. Quantitative evaluation of tissue physiological stress parameters was carried out using analytical methods to validate the conversion of classic qualitative histochemical tests for localizing lipid peroxidation, hydrogen peroxide, and total xanthine alkaloids into semi-quantitative assays. Relative electrolyte leakage (EL%) and chlorophyll content (SPAD index) were also recorded. EL% levels of treated disks were higher than those of control ones, whereas SPAD indexes were comparable. Histochemical localization indicated that levels of lipid peroxidation, H<sub>2</sub>O<sub>2</sub>, and total xanthines were also higher under osmotic stress than in control conditions. Semi-quantitative data obtained by image processing of histochemical staining consistently matched quantitative evaluations. Chromatographic analyses revealed that theophylline and caffeine concentrations increased in the presence of PEG, whereas theobromine remained constant in relation to the control. The methods herein described can be useful to rapidly acquire initial data regarding biochemical osmotic stress responses in coffee tissues based on simple staining and imaging steps. Moreover, it is likely that the same method may be applicable to other types of stresses and plant species upon minor adjustments.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":"1093-1100"},"PeriodicalIF":2.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140094545","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Differential drought tolerance among dichondra (Dichondra repens) genotypes in relation to alterations in chlorophyll metabolism, osmotic adjustment, and accumulation of organic metabolites. 水龙草(Dichondra repens)基因型的耐旱性差异与叶绿素代谢、渗透调节和有机代谢物积累的变化有关。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-03-16 DOI: 10.1007/s00709-024-01943-0
Yao Ling, Meng Tan, Yi Xi, Zhou Li

Dichondra (Dichondra repens) is an important ground cover plant for landscaping and establishment of green space, but adaptive mechanism of drought tolerance is not well understood in this species. This study was conducted to compare differential response to drought stress among three genotypes (Dr5, Duliujiang, and Dr29) based on integrated physiological, ultrastructural, and metabolic assays. Results showed that drought significantly inhibited photosynthesis, accelerated lipids peroxidation, and also disrupted water balance and cellular metabolism in dichondra plants. Dr5 showed better photochemical efficiency of photosystem II and water homeostasis, less oxidative damage, and more stable chlorophyll metabolism than Duliujinag or Dr29 in response to drought stress. In addition, Dr5 accumulated more amino acids, organic acids, and other metabolites, which was good for maintaining better antioxidant capacity, osmotic homeostasis, and energy metabolism under drought stress. Drought tolerance of Duliujiang was lower than Dr5, but better than Dr29, which could be positively correlated with accumulations of sucrose, maltitol, aconitic acid, isocitric acid, and shikimic acid due to critical roles of these metabolites in osmotic adjustment and metabolic homeostasis. Current findings provide insights into understanding of underlying mechanism of metabolic regulation in dichondra species. Dr5 could be used as an important drought-tolerant resource for cultivation and water-saving breeding.

地龙(Dichondra repens)是美化环境和建立绿地的重要地被植物,但该物种的抗旱适应机制尚不十分清楚。本研究基于综合生理、超微结构和代谢测定,比较了三种基因型(Dr5、Duliujiang 和 Dr29)对干旱胁迫的不同响应。结果表明,干旱明显抑制了地龙的光合作用,加速了脂质过氧化,并破坏了水分平衡和细胞代谢。与Duliujinag和Dr29相比,Dr5在应对干旱胁迫时表现出更好的光化学效率和水分平衡,更少的氧化损伤和更稳定的叶绿素代谢。此外,Dr5积累了更多的氨基酸、有机酸和其他代谢产物,有利于在干旱胁迫下维持更好的抗氧化能力、渗透平衡和能量代谢。独流江的抗旱性低于Dr5,但优于Dr29,这可能与蔗糖、麦芽糖醇、乌头酸、异柠檬酸和莽草酸的积累呈正相关,因为这些代谢物在渗透调节和代谢平衡中起着关键作用。目前的研究结果有助于人们深入了解双子叶植物代谢调节的基本机制。Dr5可作为重要的耐旱资源用于栽培和节水育种。
{"title":"Differential drought tolerance among dichondra (Dichondra repens) genotypes in relation to alterations in chlorophyll metabolism, osmotic adjustment, and accumulation of organic metabolites.","authors":"Yao Ling, Meng Tan, Yi Xi, Zhou Li","doi":"10.1007/s00709-024-01943-0","DOIUrl":"10.1007/s00709-024-01943-0","url":null,"abstract":"<p><p>Dichondra (Dichondra repens) is an important ground cover plant for landscaping and establishment of green space, but adaptive mechanism of drought tolerance is not well understood in this species. This study was conducted to compare differential response to drought stress among three genotypes (Dr5, Duliujiang, and Dr29) based on integrated physiological, ultrastructural, and metabolic assays. Results showed that drought significantly inhibited photosynthesis, accelerated lipids peroxidation, and also disrupted water balance and cellular metabolism in dichondra plants. Dr5 showed better photochemical efficiency of photosystem II and water homeostasis, less oxidative damage, and more stable chlorophyll metabolism than Duliujinag or Dr29 in response to drought stress. In addition, Dr5 accumulated more amino acids, organic acids, and other metabolites, which was good for maintaining better antioxidant capacity, osmotic homeostasis, and energy metabolism under drought stress. Drought tolerance of Duliujiang was lower than Dr5, but better than Dr29, which could be positively correlated with accumulations of sucrose, maltitol, aconitic acid, isocitric acid, and shikimic acid due to critical roles of these metabolites in osmotic adjustment and metabolic homeostasis. Current findings provide insights into understanding of underlying mechanism of metabolic regulation in dichondra species. Dr5 could be used as an important drought-tolerant resource for cultivation and water-saving breeding.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":"897-909"},"PeriodicalIF":2.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140140629","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cytomolecular diversity among Vigna Savi (Leguminosae) subgenera. Vigna Savi(豆科植物)亚属之间的细胞分子多样性。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-03-11 DOI: 10.1007/s00709-024-01944-z
Sibelle Dias, Rosilda Cintra Souza, Emanuelle Varão Vasconcelos, Santelmo Vasconcelos, Ana Rafaela da Silva Oliveira, Lívia do Vale Martins, Fernanda de Oliveira Bustamante, Victor Alves da Costa, Gustavo Souza, Antônio Félix da Costa, Ana Maria Benko-Iseppon, Martin Knytl, Ana Christina Brasileiro-Vidal

The genus Vigna (Leguminosae) comprises about 150 species grouped into five subgenera. The present study aimed to improve the understanding of karyotype diversity and evolution in Vigna, using new and previously published data through different cytogenetic and DNA content approaches. In the Vigna subgenera, we observed a random distribution of rDNA patterns. The 35S rDNA varied in position, from terminal to proximal, and in number, ranging from one (V. aconitifolia, V. subg. Ceratotropis) to seven pairs (V. unguiculata subsp. unguiculata, V. subg. Vigna). On the other hand, the number of 5S rDNA was conserved (one or two pairs), except for V. radiata (V. subg. Ceratotropis), which had three pairs. Genome size was relatively conserved within the genus, ranging from 1C = 0.43 to 0.70 pg in V. oblongifolia and V. unguiculata subsp. unguiculata, respectively, both belonging to V. subg. Vigna. However, we observed a positive correlation between DNA content and the number of 35S rDNA sites. In addition, data from chromosome-specific BAC-FISH suggest that the ancestral 35S rDNA locus is conserved on chromosome 6 within Vigna. Considering the rapid diversification in the number and position of rDNA sites, such conservation is surprising and suggests that additional sites may have spread out from this ancestral locus.

葡萄属(豆科)包括约 150 个物种,分为五个亚属。本研究旨在通过不同的细胞遗传学和 DNA 含量方法,利用新的和以前发表的数据,加深对木犀属核型多样性和进化的了解。在木葡萄亚属中,我们观察到 rDNA 模式的随机分布。35S rDNA 的位置(从末端到近端)和数量各不相同,从 1 对(V. aconitifolia、V. subg. Ceratotropis)到 7 对(V. unguiculata subsp.另一方面,除了 V. radiata(V. 亚种 Ceratotropis)有三对 5S rDNA 外,其他物种的 5S rDNA 数量保持一致(一或两对)。基因组大小在属内相对保守,长叶葡萄属(V. oblongifolia)和unguiculata 亚种葡萄属(V. unguiculata)的基因组大小从 1C = 0.43 pg 到 0.70 pg 不等,两者都属于葡萄亚种。不过,我们观察到 DNA 含量与 35S rDNA 位点数量呈正相关。此外,染色体特异性 BAC-FISH 的数据表明,35S rDNA 的祖先位点保留在 Vigna 的 6 号染色体上。考虑到 rDNA 位点在数量和位置上的快速多样化,这种保留是令人惊讶的,并表明可能有更多的位点从这个祖先位点扩散出去。
{"title":"Cytomolecular diversity among Vigna Savi (Leguminosae) subgenera.","authors":"Sibelle Dias, Rosilda Cintra Souza, Emanuelle Varão Vasconcelos, Santelmo Vasconcelos, Ana Rafaela da Silva Oliveira, Lívia do Vale Martins, Fernanda de Oliveira Bustamante, Victor Alves da Costa, Gustavo Souza, Antônio Félix da Costa, Ana Maria Benko-Iseppon, Martin Knytl, Ana Christina Brasileiro-Vidal","doi":"10.1007/s00709-024-01944-z","DOIUrl":"10.1007/s00709-024-01944-z","url":null,"abstract":"<p><p>The genus Vigna (Leguminosae) comprises about 150 species grouped into five subgenera. The present study aimed to improve the understanding of karyotype diversity and evolution in Vigna, using new and previously published data through different cytogenetic and DNA content approaches. In the Vigna subgenera, we observed a random distribution of rDNA patterns. The 35S rDNA varied in position, from terminal to proximal, and in number, ranging from one (V. aconitifolia, V. subg. Ceratotropis) to seven pairs (V. unguiculata subsp. unguiculata, V. subg. Vigna). On the other hand, the number of 5S rDNA was conserved (one or two pairs), except for V. radiata (V. subg. Ceratotropis), which had three pairs. Genome size was relatively conserved within the genus, ranging from 1C = 0.43 to 0.70 pg in V. oblongifolia and V. unguiculata subsp. unguiculata, respectively, both belonging to V. subg. Vigna. However, we observed a positive correlation between DNA content and the number of 35S rDNA sites. In addition, data from chromosome-specific BAC-FISH suggest that the ancestral 35S rDNA locus is conserved on chromosome 6 within Vigna. Considering the rapid diversification in the number and position of rDNA sites, such conservation is surprising and suggests that additional sites may have spread out from this ancestral locus.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":"859-875"},"PeriodicalIF":2.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140102336","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Multimodal non-invasive probing of stress-induced carotenogenesis in the cells of microalga Bracteacoccus aggregatus. 多模式非侵入式探测微藻白术聚糖细胞中应激诱导的胡萝卜素生成。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-05-04 DOI: 10.1007/s00709-024-01956-9
Alexei Solovchenko, Elena Lobakova, Alexey Semenov, Olga Gorelova, Tatiana Fedorenko, Olga Chivkunova, Evgenia Parshina, Georgy Maksimov, Nikolai N Sluchanko, Eugene Maksimov

Microalgae are the richest source of natural carotenoids-accessory photosynthetic pigments used as natural antioxidants, safe colorants, and nutraceuticals. Microalga Bracteacoccus aggregatus IPPAS C-2045 responds to stresses, including high light, with carotenogenesis-gross accumulation of secondary carotenoids (the carotenoids structurally and energetically uncoupled from photosynthesis). Precise mechanisms of cytoplasmic transport and subcellular distribution of the secondary carotenoids under stress are still unknown. Using multimodal imaging combining micro-Raman imaging (MRI), fluorescent lifetime (τ) imaging (FLIM), and transmission electron microscopy (TEM), we monitored ultrastructural and biochemical rearrangements of B. aggregatus cells during the stress-induced carotenogenesis. MRI revealed a decline in the diversity of molecular surrounding of the carotenoids in the cells compatible with the relocation of the bulk of the carotenoids in the cell from functionally and structurally heterogeneous photosynthetic apparatus to the more homogenous lipid matrix of the oleosomes. Two-photon FLIM highlighted the pigment transformation in the cell during the stress-induced carotenogenesis. The structures co-localized with the carotenoids with shorter τ (mainly chloroplast) shrunk, whereas the structures harboring secondary carotenoids with longer τ (mainly oleosomes) expanded. These changes were in line with the ultrastructural data (TEM). Fluorescence of B. aggregatus carotenoids, either in situ or in acetone extracts, possessed a surprisingly long lifetime. We hypothesize that the extension of τ of the carotenoids is due to their aggregation and/or association with lipids and proteins. The propagation of the carotenoids with prolonged τ is considered to be a manifestation of the secondary carotenogenesis suitable for its non-invasive monitoring with multimodal imaging.

微藻类是天然类胡萝卜素的最丰富来源--类胡萝卜素是光合作用的辅助色素,可用作天然抗氧化剂、安全着色剂和营养保健品。微藻白术聚合藻 IPPAS C-2045 通过类胡萝卜素生成--次生类胡萝卜素的大量积累(在结构上和能量上与光合作用脱钩的类胡萝卜素)来应对包括强光在内的压力。次生类胡萝卜素在胁迫下的细胞质运输和亚细胞分布的精确机制尚不清楚。利用微拉曼成像(MRI)、荧光寿命(τ)成像(FLIM)和透射电子显微镜(TEM)相结合的多模式成像技术,我们监测了B. 聚合体细胞在应激诱导胡萝卜素生成过程中的超微结构和生化重排。核磁共振成像显示,细胞中类胡萝卜素分子周围的多样性下降,这与细胞中大部分类胡萝卜素从功能和结构上异质的光合装置转移到更均匀的油脂体脂质基质是一致的。双光子荧光成像(Two-photon FLIM)突出显示了在应激诱导的类胡萝卜素生成过程中细胞中色素的转变。与τ较短的类胡萝卜素共定位的结构(主要是叶绿体)缩小,而含有τ较长的次生类胡萝卜素的结构(主要是油小体)扩大。这些变化与超微结构数据(TEM)一致。无论是在原位还是在丙酮提取物中,聚合虫类胡萝卜素的荧光都具有惊人的长寿命。我们推测类胡萝卜素τ的延长是由于它们的聚集和/或与脂质和蛋白质的结合。类胡萝卜素τ的延长被认为是二次胡萝卜素生成的一种表现形式,适合用多模态成像技术对其进行非侵入性监测。
{"title":"Multimodal non-invasive probing of stress-induced carotenogenesis in the cells of microalga Bracteacoccus aggregatus.","authors":"Alexei Solovchenko, Elena Lobakova, Alexey Semenov, Olga Gorelova, Tatiana Fedorenko, Olga Chivkunova, Evgenia Parshina, Georgy Maksimov, Nikolai N Sluchanko, Eugene Maksimov","doi":"10.1007/s00709-024-01956-9","DOIUrl":"10.1007/s00709-024-01956-9","url":null,"abstract":"<p><p>Microalgae are the richest source of natural carotenoids-accessory photosynthetic pigments used as natural antioxidants, safe colorants, and nutraceuticals. Microalga Bracteacoccus aggregatus IPPAS C-2045 responds to stresses, including high light, with carotenogenesis-gross accumulation of secondary carotenoids (the carotenoids structurally and energetically uncoupled from photosynthesis). Precise mechanisms of cytoplasmic transport and subcellular distribution of the secondary carotenoids under stress are still unknown. Using multimodal imaging combining micro-Raman imaging (MRI), fluorescent lifetime (τ) imaging (FLIM), and transmission electron microscopy (TEM), we monitored ultrastructural and biochemical rearrangements of B. aggregatus cells during the stress-induced carotenogenesis. MRI revealed a decline in the diversity of molecular surrounding of the carotenoids in the cells compatible with the relocation of the bulk of the carotenoids in the cell from functionally and structurally heterogeneous photosynthetic apparatus to the more homogenous lipid matrix of the oleosomes. Two-photon FLIM highlighted the pigment transformation in the cell during the stress-induced carotenogenesis. The structures co-localized with the carotenoids with shorter τ (mainly chloroplast) shrunk, whereas the structures harboring secondary carotenoids with longer τ (mainly oleosomes) expanded. These changes were in line with the ultrastructural data (TEM). Fluorescence of B. aggregatus carotenoids, either in situ or in acetone extracts, possessed a surprisingly long lifetime. We hypothesize that the extension of τ of the carotenoids is due to their aggregation and/or association with lipids and proteins. The propagation of the carotenoids with prolonged τ is considered to be a manifestation of the secondary carotenogenesis suitable for its non-invasive monitoring with multimodal imaging.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":"1051-1071"},"PeriodicalIF":2.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140851132","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Viable protoplast isolation, organelle visualization and transformation of the globally distributed plant pathogen Phytophthora cinnamomi. 全球分布的植物病原体 Phytophthora cinnamomi 的有活力原生质体分离、细胞器可视化和转化。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-05-04 DOI: 10.1007/s00709-024-01953-y
Aayushree Kharel, James Rookes, Mark Ziemann, David Cahill

Phytophthora cinnamomi is an oomycete plant pathogen with a host range of almost 5000 plant species worldwide and therefore poses a serious threat to biodiversity. Omics technology has provided significant progress in our understanding of oomycete biology, however, transformation studies of Phytophthora for gene functionalisation are still in their infancy. Only a limited number of Phytophthora species have been successfully transformed and gene edited to elucidate the role of particular genes. There is a need to escalate our efforts to understand molecular processes, gene regulation and infection mechanisms of the pathogen to enable us to develop new disease management strategies. The primary obstacle hindering the advancement of transformation studies in Phytophthora is their challenging and unique nature, coupled with our limited comprehension of why they remain such an intractable system to work with. In this study, we have identified some of the key factors associated with the recalcitrant nature of P. cinnamomi. We have incorporated fluorescence microscopy and flow cytometry along with the organelle-specific dyes, fluorescein diacetate, Hoechst 33342 and MitoTracker™ Red CMXRos, to assess P. cinnamomi-derived protoplast populations. This approach has also provided valuable insights into the broader cell biology of Phytophthora. Furthermore, we have optimized the crucial steps that allow transformation of P. cinnamomi and have generated transformed isolates that express a cyan fluorescent protein, with a transformation efficiency of 19.5%. We therefore provide a platform for these methodologies to be applied for the transformation of other Phytophthora species and pave the way for future gene functionalisation studies.

Phytophthora cinnamomi 是一种卵菌植物病原体,寄主范围遍及全球近 5000 种植物,因此对生物多样性构成严重威胁。Omics 技术在我们了解卵菌生物学方面取得了重大进展,但针对基因功能化的噬菌体转化研究仍处于起步阶段。只有有限的噬菌体物种被成功转化并进行基因编辑,以阐明特定基因的作用。我们需要进一步努力了解病原体的分子过程、基因调控和感染机制,以便制定新的疾病管理策略。阻碍噬菌体转化研究进展的主要障碍是噬菌体的挑战性和独特性,以及我们对噬菌体为什么仍然是一个难以处理的系统的理解有限。在这项研究中,我们确定了与 P. cinnamomi 的顽固性相关的一些关键因素。我们将荧光显微镜和流式细胞仪与细胞器特异性染料(二乙酸荧光素、Hoechst 33342 和 MitoTracker™ Red CMXRos)结合起来,对肉桂蛀虫产生的原生质体群体进行评估。这种方法还为更广泛的噬菌体细胞生物学提供了宝贵的见解。此外,我们还优化了转化 P. cinnamomi 的关键步骤,并产生了表达青色荧光蛋白的转化分离物,转化效率达到 19.5%。因此,我们提供了一个平台,可将这些方法应用于其他噬菌体物种的转化,并为未来的基因功能化研究铺平道路。
{"title":"Viable protoplast isolation, organelle visualization and transformation of the globally distributed plant pathogen Phytophthora cinnamomi.","authors":"Aayushree Kharel, James Rookes, Mark Ziemann, David Cahill","doi":"10.1007/s00709-024-01953-y","DOIUrl":"10.1007/s00709-024-01953-y","url":null,"abstract":"<p><p>Phytophthora cinnamomi is an oomycete plant pathogen with a host range of almost 5000 plant species worldwide and therefore poses a serious threat to biodiversity. Omics technology has provided significant progress in our understanding of oomycete biology, however, transformation studies of Phytophthora for gene functionalisation are still in their infancy. Only a limited number of Phytophthora species have been successfully transformed and gene edited to elucidate the role of particular genes. There is a need to escalate our efforts to understand molecular processes, gene regulation and infection mechanisms of the pathogen to enable us to develop new disease management strategies. The primary obstacle hindering the advancement of transformation studies in Phytophthora is their challenging and unique nature, coupled with our limited comprehension of why they remain such an intractable system to work with. In this study, we have identified some of the key factors associated with the recalcitrant nature of P. cinnamomi. We have incorporated fluorescence microscopy and flow cytometry along with the organelle-specific dyes, fluorescein diacetate, Hoechst 33342 and MitoTracker™ Red CMXRos, to assess P. cinnamomi-derived protoplast populations. This approach has also provided valuable insights into the broader cell biology of Phytophthora. Furthermore, we have optimized the crucial steps that allow transformation of P. cinnamomi and have generated transformed isolates that express a cyan fluorescent protein, with a transformation efficiency of 19.5%. We therefore provide a platform for these methodologies to be applied for the transformation of other Phytophthora species and pave the way for future gene functionalisation studies.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":"1073-1092"},"PeriodicalIF":2.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11358197/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140870030","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Plant regeneration capacity in seeds of three species of Miconia (Melastomataceae) may be related to endogenous polyamine profiles. 三种Miconia( Melastomataceae)种子的植物再生能力可能与内源多胺谱有关。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-03-26 DOI: 10.1007/s00709-024-01945-y
Juliana Klostermann Ziemmer, Tadeu Dos Reis de Oliveira, Claudete Santa-Catarina, Leila do Nascimento Vieira, Renato Goldenberg, Hugo Pacheco de Freitas Fraga

In plant tissue culture, differences in endogenous levels of species-specific plant growth regulators (PGRs) may explain differences in regenerative capacity. In the case of polyamines (PAs), their dynamics and distribution may vary between species, genotypes, tissues, and developmental pathways, such as sexual reproduction and apomixis. In this study, for the first time, we aimed to assess the impact of varying endogenous PAs levels in seeds from distinct reproductive modes in Miconia spp. (Melastomataceae), on their in vitro regenerative capacity. We quantified the free PAs endogenous content in seeds of Miconia australis (obligate apomictic), Miconia hyemalis (facultative apomictic), and Miconia sellowiana (sexual) and evaluated their in vitro regenerative potential in WPM culture medium supplemented with a combination of 2,4-dichlorophenoxyacetic acid (2,4-D) and 6-benzylaminopurine (BAP). The morphogenic responses were characterized by light microscopy and scanning electron microscopy and discussed regarding the endogenous PAs profiles found. Seeds of M. sellowiana presented approximately eight times more putrescine than M. australis, which was associated with a higher percentage of regenerated calluses (76.67%) than M. australis (5.56%). On the other hand, spermine levels were significantly higher in M. australis. Spermine is indicated as an inhibitor of auxin-carrying gene expression, which may have contributed to its lower regenerative capacity under the tested conditions. These findings provide important insights into in vitro morphogenesis mechanisms in Miconia and highlight the significance of endogenous PA levels in plant regeneration. These discoveries can potentially optimize future regeneration protocols in Miconia, a plant group still underexplored in this area.

在植物组织培养中,物种特异性植物生长调节剂(PGRs)内源水平的差异可能解释了再生能力的差异。就多胺(PAs)而言,其动态和分布可能因物种、基因型、组织和发育途径(如有性生殖和无性繁殖)而异。在本研究中,我们首次评估了不同繁殖模式的毛地黄属(Miconia spp.)种子中不同内源 PAs 水平对其体外再生能力的影响。我们量化了Miconia australis(强制性无性繁殖)、Miconia hyemalis(兼性无性繁殖)和Miconia sellowiana(有性繁殖)种子中游离PAs的内源含量,并在添加了2,4-二氯苯氧乙酸(2,4-D)和6-苄基氨基嘌呤(BAP)的WPM培养基中评估了它们的体外再生潜力。通过光学显微镜和扫描电子显微镜对形态发生反应进行了表征,并对发现的内源 PAs 特征进行了讨论。M. sellowiana种子中的腐胺含量约为 M. australis的八倍,这与再生茧的比例(76.67%)高于 M. australis(5.56%)有关。另一方面,精胺水平在 M. australis 中明显较高。精胺被认为是携带辅助素基因表达的抑制剂,这可能是导致其在测试条件下再生能力较低的原因。这些发现为了解 Miconia 的离体形态发生机制提供了重要的见解,并强调了内源 PA 水平在植物再生中的重要性。这些发现有可能优化未来Miconia的再生方案。
{"title":"Plant regeneration capacity in seeds of three species of Miconia (Melastomataceae) may be related to endogenous polyamine profiles.","authors":"Juliana Klostermann Ziemmer, Tadeu Dos Reis de Oliveira, Claudete Santa-Catarina, Leila do Nascimento Vieira, Renato Goldenberg, Hugo Pacheco de Freitas Fraga","doi":"10.1007/s00709-024-01945-y","DOIUrl":"10.1007/s00709-024-01945-y","url":null,"abstract":"<p><p>In plant tissue culture, differences in endogenous levels of species-specific plant growth regulators (PGRs) may explain differences in regenerative capacity. In the case of polyamines (PAs), their dynamics and distribution may vary between species, genotypes, tissues, and developmental pathways, such as sexual reproduction and apomixis. In this study, for the first time, we aimed to assess the impact of varying endogenous PAs levels in seeds from distinct reproductive modes in Miconia spp. (Melastomataceae), on their in vitro regenerative capacity. We quantified the free PAs endogenous content in seeds of Miconia australis (obligate apomictic), Miconia hyemalis (facultative apomictic), and Miconia sellowiana (sexual) and evaluated their in vitro regenerative potential in WPM culture medium supplemented with a combination of 2,4-dichlorophenoxyacetic acid (2,4-D) and 6-benzylaminopurine (BAP). The morphogenic responses were characterized by light microscopy and scanning electron microscopy and discussed regarding the endogenous PAs profiles found. Seeds of M. sellowiana presented approximately eight times more putrescine than M. australis, which was associated with a higher percentage of regenerated calluses (76.67%) than M. australis (5.56%). On the other hand, spermine levels were significantly higher in M. australis. Spermine is indicated as an inhibitor of auxin-carrying gene expression, which may have contributed to its lower regenerative capacity under the tested conditions. These findings provide important insights into in vitro morphogenesis mechanisms in Miconia and highlight the significance of endogenous PA levels in plant regeneration. These discoveries can potentially optimize future regeneration protocols in Miconia, a plant group still underexplored in this area.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":"937-950"},"PeriodicalIF":2.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140294291","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Argon non-thermal plasma treatment promotes the development of rice (Oryza sativa L.) in saline alkali environments. 氩气非热等离子体处理可促进盐碱环境中水稻(Oryza sativa L. )的生长发育。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-03-23 DOI: 10.1007/s00709-024-01946-x
Kai Liu, Yan-Jiang Feng, Jun-Xiang Guo, Gui-Ling Wang, Li-Li Shan, Shi-Wei Gao, Qing Liu, Hu-Nan Sun, Xi-Yu Li, Xing-Rong Sun, Jing-Yang Bian, Taeho Kwon

Soil salinization leads to a reduction in arable land area, which seriously endangers food security. Developing saline-alkali land has become a key measure to address the contradiction between population growth and limited arable land. Rice is the most important global food crop, feeding half of the world's population and making it a suitable choice for planting on saline-alkali lands. The traditional salt-alkali improvement method has several drawbacks. Currently, non-thermal plasma (NTP) technology is being increasingly applied in agriculture. However, there are few reports on the cultivation of salt/alkali-tolerant rice. Under alkaline stress, argon NTP treatment significantly increased the germination rate of Longdao 5 (LD5) rice seeds. In addition, at 15 kV and 120 s, NTP treatment significantly increased the activity of antioxidant enzymes such as catalase and SOD. NTP treatment induced changes in genes related to salt-alkali stress in rice seedlings, such as chitinase and xylanase inhibitor proteins, which increased the tolerance of the seeds to salt-alkali stress. This experiment has expanded the application scope of NTP in agriculture, providing a more cost-effective, less harmful, and faster method for developing salt-alkali-tolerant rice and laying a theoretical foundation for cultivating NTP-enhanced salt-alkali-tolerant rice.

土壤盐碱化导致耕地面积减少,严重危及粮食安全。开发盐碱地已成为解决人口增长与有限耕地之间矛盾的关键措施。水稻是全球最重要的粮食作物,养活着全球一半的人口,因此适合在盐碱地上种植。传统的盐碱地改良方法有几个缺点。目前,非热等离子体(NTP)技术在农业中的应用越来越广泛。然而,有关耐盐碱水稻栽培的报道却很少。在碱性胁迫下,氩气 NTP 处理能显著提高龙稻 5 号(LD5)水稻种子的发芽率。此外,在 15 千伏和 120 秒的条件下,NTP 处理能显著提高过氧化氢酶和 SOD 等抗氧化酶的活性。NTP 处理诱导水稻幼苗中与盐碱胁迫相关的基因发生变化,如几丁质酶和木聚糖酶抑制蛋白,从而提高了种子对盐碱胁迫的耐受性。该实验拓展了 NTP 在农业上的应用范围,为培育耐盐碱水稻提供了一种成本更低、危害更小、速度更快的方法,为培育 NTP 增强型耐盐碱水稻奠定了理论基础。
{"title":"Argon non-thermal plasma treatment promotes the development of rice (Oryza sativa L.) in saline alkali environments.","authors":"Kai Liu, Yan-Jiang Feng, Jun-Xiang Guo, Gui-Ling Wang, Li-Li Shan, Shi-Wei Gao, Qing Liu, Hu-Nan Sun, Xi-Yu Li, Xing-Rong Sun, Jing-Yang Bian, Taeho Kwon","doi":"10.1007/s00709-024-01946-x","DOIUrl":"10.1007/s00709-024-01946-x","url":null,"abstract":"<p><p>Soil salinization leads to a reduction in arable land area, which seriously endangers food security. Developing saline-alkali land has become a key measure to address the contradiction between population growth and limited arable land. Rice is the most important global food crop, feeding half of the world's population and making it a suitable choice for planting on saline-alkali lands. The traditional salt-alkali improvement method has several drawbacks. Currently, non-thermal plasma (NTP) technology is being increasingly applied in agriculture. However, there are few reports on the cultivation of salt/alkali-tolerant rice. Under alkaline stress, argon NTP treatment significantly increased the germination rate of Longdao 5 (LD5) rice seeds. In addition, at 15 kV and 120 s, NTP treatment significantly increased the activity of antioxidant enzymes such as catalase and SOD. NTP treatment induced changes in genes related to salt-alkali stress in rice seedlings, such as chitinase and xylanase inhibitor proteins, which increased the tolerance of the seeds to salt-alkali stress. This experiment has expanded the application scope of NTP in agriculture, providing a more cost-effective, less harmful, and faster method for developing salt-alkali-tolerant rice and laying a theoretical foundation for cultivating NTP-enhanced salt-alkali-tolerant rice.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":"927-936"},"PeriodicalIF":2.5,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140194430","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
In Memoriam Cornelius Lütz (1945-2024). 悼念科尼利厄斯-吕茨(1945-2024)。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-08-15 DOI: 10.1007/s00709-024-01978-3
Andreas Holzinger, Daniel Remias
{"title":"In Memoriam Cornelius Lütz (1945-2024).","authors":"Andreas Holzinger, Daniel Remias","doi":"10.1007/s00709-024-01978-3","DOIUrl":"https://doi.org/10.1007/s00709-024-01978-3","url":null,"abstract":"","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-08-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141983067","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Feeling like David or rather Don Quixote?-hello from a new editor in chief. 感觉自己像大卫还是堂吉诃德?
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-08-02 DOI: 10.1007/s00709-024-01972-9
Joern Bullerdiek
{"title":"Feeling like David or rather Don Quixote?-hello from a new editor in chief.","authors":"Joern Bullerdiek","doi":"10.1007/s00709-024-01972-9","DOIUrl":"https://doi.org/10.1007/s00709-024-01972-9","url":null,"abstract":"","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":""},"PeriodicalIF":2.5,"publicationDate":"2024-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141875778","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Protoplasma
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1