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Plant regeneration capacity in seeds of three species of Miconia (Melastomataceae) may be related to endogenous polyamine profiles. 三种Miconia( Melastomataceae)种子的植物再生能力可能与内源多胺谱有关。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-03-26 DOI: 10.1007/s00709-024-01945-y
Juliana Klostermann Ziemmer, Tadeu Dos Reis de Oliveira, Claudete Santa-Catarina, Leila do Nascimento Vieira, Renato Goldenberg, Hugo Pacheco de Freitas Fraga

In plant tissue culture, differences in endogenous levels of species-specific plant growth regulators (PGRs) may explain differences in regenerative capacity. In the case of polyamines (PAs), their dynamics and distribution may vary between species, genotypes, tissues, and developmental pathways, such as sexual reproduction and apomixis. In this study, for the first time, we aimed to assess the impact of varying endogenous PAs levels in seeds from distinct reproductive modes in Miconia spp. (Melastomataceae), on their in vitro regenerative capacity. We quantified the free PAs endogenous content in seeds of Miconia australis (obligate apomictic), Miconia hyemalis (facultative apomictic), and Miconia sellowiana (sexual) and evaluated their in vitro regenerative potential in WPM culture medium supplemented with a combination of 2,4-dichlorophenoxyacetic acid (2,4-D) and 6-benzylaminopurine (BAP). The morphogenic responses were characterized by light microscopy and scanning electron microscopy and discussed regarding the endogenous PAs profiles found. Seeds of M. sellowiana presented approximately eight times more putrescine than M. australis, which was associated with a higher percentage of regenerated calluses (76.67%) than M. australis (5.56%). On the other hand, spermine levels were significantly higher in M. australis. Spermine is indicated as an inhibitor of auxin-carrying gene expression, which may have contributed to its lower regenerative capacity under the tested conditions. These findings provide important insights into in vitro morphogenesis mechanisms in Miconia and highlight the significance of endogenous PA levels in plant regeneration. These discoveries can potentially optimize future regeneration protocols in Miconia, a plant group still underexplored in this area.

在植物组织培养中,物种特异性植物生长调节剂(PGRs)内源水平的差异可能解释了再生能力的差异。就多胺(PAs)而言,其动态和分布可能因物种、基因型、组织和发育途径(如有性生殖和无性繁殖)而异。在本研究中,我们首次评估了不同繁殖模式的毛地黄属(Miconia spp.)种子中不同内源 PAs 水平对其体外再生能力的影响。我们量化了Miconia australis(强制性无性繁殖)、Miconia hyemalis(兼性无性繁殖)和Miconia sellowiana(有性繁殖)种子中游离PAs的内源含量,并在添加了2,4-二氯苯氧乙酸(2,4-D)和6-苄基氨基嘌呤(BAP)的WPM培养基中评估了它们的体外再生潜力。通过光学显微镜和扫描电子显微镜对形态发生反应进行了表征,并对发现的内源 PAs 特征进行了讨论。M. sellowiana种子中的腐胺含量约为 M. australis的八倍,这与再生茧的比例(76.67%)高于 M. australis(5.56%)有关。另一方面,精胺水平在 M. australis 中明显较高。精胺被认为是携带辅助素基因表达的抑制剂,这可能是导致其在测试条件下再生能力较低的原因。这些发现为了解 Miconia 的离体形态发生机制提供了重要的见解,并强调了内源 PA 水平在植物再生中的重要性。这些发现有可能优化未来Miconia的再生方案。
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引用次数: 0
Argon non-thermal plasma treatment promotes the development of rice (Oryza sativa L.) in saline alkali environments. 氩气非热等离子体处理可促进盐碱环境中水稻(Oryza sativa L. )的生长发育。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-03-23 DOI: 10.1007/s00709-024-01946-x
Kai Liu, Yan-Jiang Feng, Jun-Xiang Guo, Gui-Ling Wang, Li-Li Shan, Shi-Wei Gao, Qing Liu, Hu-Nan Sun, Xi-Yu Li, Xing-Rong Sun, Jing-Yang Bian, Taeho Kwon

Soil salinization leads to a reduction in arable land area, which seriously endangers food security. Developing saline-alkali land has become a key measure to address the contradiction between population growth and limited arable land. Rice is the most important global food crop, feeding half of the world's population and making it a suitable choice for planting on saline-alkali lands. The traditional salt-alkali improvement method has several drawbacks. Currently, non-thermal plasma (NTP) technology is being increasingly applied in agriculture. However, there are few reports on the cultivation of salt/alkali-tolerant rice. Under alkaline stress, argon NTP treatment significantly increased the germination rate of Longdao 5 (LD5) rice seeds. In addition, at 15 kV and 120 s, NTP treatment significantly increased the activity of antioxidant enzymes such as catalase and SOD. NTP treatment induced changes in genes related to salt-alkali stress in rice seedlings, such as chitinase and xylanase inhibitor proteins, which increased the tolerance of the seeds to salt-alkali stress. This experiment has expanded the application scope of NTP in agriculture, providing a more cost-effective, less harmful, and faster method for developing salt-alkali-tolerant rice and laying a theoretical foundation for cultivating NTP-enhanced salt-alkali-tolerant rice.

土壤盐碱化导致耕地面积减少,严重危及粮食安全。开发盐碱地已成为解决人口增长与有限耕地之间矛盾的关键措施。水稻是全球最重要的粮食作物,养活着全球一半的人口,因此适合在盐碱地上种植。传统的盐碱地改良方法有几个缺点。目前,非热等离子体(NTP)技术在农业中的应用越来越广泛。然而,有关耐盐碱水稻栽培的报道却很少。在碱性胁迫下,氩气 NTP 处理能显著提高龙稻 5 号(LD5)水稻种子的发芽率。此外,在 15 千伏和 120 秒的条件下,NTP 处理能显著提高过氧化氢酶和 SOD 等抗氧化酶的活性。NTP 处理诱导水稻幼苗中与盐碱胁迫相关的基因发生变化,如几丁质酶和木聚糖酶抑制蛋白,从而提高了种子对盐碱胁迫的耐受性。该实验拓展了 NTP 在农业上的应用范围,为培育耐盐碱水稻提供了一种成本更低、危害更小、速度更快的方法,为培育 NTP 增强型耐盐碱水稻奠定了理论基础。
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引用次数: 0
In Memoriam Cornelius Lütz (1945-2024). 悼念科尼利厄斯-吕茨(1945-2024)。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-08-15 DOI: 10.1007/s00709-024-01978-3
Andreas Holzinger, Daniel Remias
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引用次数: 0
Feeling like David or rather Don Quixote?-hello from a new editor in chief. 感觉自己像大卫还是堂吉诃德?
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-08-02 DOI: 10.1007/s00709-024-01972-9
Joern Bullerdiek
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引用次数: 0
A rapid and efficient Agrobacterium-mediated transient transformation system in grape berries. 葡萄浆果中快速高效的农杆菌介导瞬时转化系统。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-07-01 Epub Date: 2024-02-29 DOI: 10.1007/s00709-024-01938-x
Jiannan Xie, Chang He, Zhiqian Li, Meng Li, Shanshan He, Jiakang Qian, Bin Tan, Xianbo Zheng, Jun Cheng, Wei Wang, Jidong Li, Jiancan Feng, Xia Ye

Transient transformation is extremely useful for rapid in vivo assessment of gene function, especially for fruit-related genes. Grape berry, while an important fruit crop, is recalcitrant to transient transformation, due to the high turgor pressure in its mesocarp cells that limits the ability of Agrobacterium to penetrate into the tissue. It is urgent to establish a simple transient transformation system for rapid analysis of gene function. In this study, different injection methods, grape genotypes, and developmental stages were tested in order to develop a rapid and efficient Agrobacterium-mediated transient transformation methodology for grape berries. Two injection methods, namely punch injection and direct injection, were evaluated using the β-glucuronidase (GUS) gene and by x-gluc tissue staining and 4-methylumbelliferyl-β-D-glucuronide fluorescence analysis. The results indicated that there were no significant differences on transformation effects between the two methods, but the latter was more suitable because of its simplicity and convenience. Six grape cultivars ('Hanxiangmi', 'Moldova', 'Zijixin', 'Jumeigui', 'Shine-Muscat', and 'A17') were tested for transient transformation. 'Hanxiangmi', 'Moldova', and 'Zijixin' grape berries were not suitable for agroinfiltration due to frequently fruit cracking, browning, and formation of scar skin. The fruit integrity rates of 'Jumeigui', 'Shine-Muscat', and 'A17' berries were all above 80%, and GUS activity was detected in the berries of the three cultivars 3-14 days after injection with the Agrobacterium culture, while higher GUS activities were observed in the 'Jumeigui' berries. The levels of GUS activity in injected berries at 7-8 weeks after full blooming (WAFB) were more than twice at 6 WAFB. In subsequent assays, the over-expression of MYB transcription factor VvMYB44 via transient transformation accelerated the anthocyanin accumulation and fruit coloring through raising the expression levels of VvLAR1, VvUFGT, VvLDOX, VvANS, and VvDFR, which verified the effectiveness of this transformation system. These experiments finally identified the reliable grape cultivars and suitable operational approach for transient transformation and further indicated that this Agrobacterium-mediated transient transformation system was efficient and suitable for the elucidation of gene function in grape berries.

瞬时转化对于在体内快速评估基因功能非常有用,尤其是与水果相关的基因。葡萄浆果虽然是一种重要的水果作物,但由于其中果皮细胞中的高渗透压限制了农杆菌渗透到组织中的能力,因此很难进行瞬时转化。建立一个简单的瞬时转化系统以快速分析基因功能迫在眉睫。本研究测试了不同的注射方法、葡萄基因型和发育阶段,以开发一种快速高效的农杆菌介导的葡萄浆果瞬时转化方法。通过β-葡萄糖醛酸酶(GUS)基因、x-葡萄糖组织染色和4-甲基伞形酮酰-β-D-葡萄糖醛酸荧光分析,对冲孔注射和直接注射两种注射方法进行了评估。结果表明,两种方法的转化效果没有显著差异,但后者因其简单方便而更适合。对 6 个葡萄品种('Hanxiangmi'、'Moldova'、'Zijixin'、'Jumeigui'、'Shine-Muscat'和'A17')进行了瞬时转化试验。由于'韩香米'、'摩尔多瓦'和'紫吉欣'葡萄果实经常出现裂果、褐变和疤皮的形成,因此不适合进行农业渗透。注入农杆菌培养物 3-14 天后,'Jumeigui'、'Shine-Muscat'和'A17'浆果的果实完整率均在 80% 以上,并在这三个品种的浆果中检测到 GUS 活性,其中'Jumeigui'浆果的 GUS 活性较高。盛花期后 7-8 周(WAFB)注射的浆果中的 GUS 活性水平是盛花期后 6 周的两倍多。在随后的实验中,通过瞬时转化过度表达 MYB 转录因子 VvMYB44,提高了 VvLAR1、VvUFGT、VvLDOX、VvANS 和 VvDFR 的表达水平,从而加速了花青素的积累和果实着色,验证了该转化系统的有效性。这些实验最终确定了可靠的葡萄栽培品种和适合瞬时转化的操作方法,并进一步表明这种农杆菌介导的瞬时转化系统是高效的,适合用于阐明葡萄浆果中的基因功能。
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引用次数: 0
Screening cotton genotypes for their drought tolerance ability based on the expression level of dehydration-responsive element-binding protein and proline biosynthesis-related genes and morpho-physio-biochemical responses. 根据脱水反应元件结合蛋白和脯氨酸生物合成相关基因的表达水平以及形态-生理-生化反应筛选耐旱能力强的棉花基因型。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-07-01 Epub Date: 2024-02-20 DOI: 10.1007/s00709-024-01935-0
Rujira Tisarum, Cattarin Theerawitaya, Patchara Praseartkul, Daonapa Chungloo, Hayat Ullah, Sushil Kumar Himanshu, Avishek Datta, Suriyan Cha-Um

Drought stress adversely affects growth, development, productivity, and fiber quality of cotton (Gossypium hirsutum L). Breeding strategies to enhance drought tolerance require an improved knowledge of plant drought responses necessitating proper identification of drought-tolerant genotypes of crops, including cotton. The objective of this study was to classify the selected cotton genotypes for their drought tolerance ability based on morpho-physio-biochemical traits using Hierarchical Ward's cluster analysis. Five genotypes of cotton (Takfa 3, Takfa 6, Takfa 7, Takfa 84-4, and Takfa 86-5) were selected as plant materials, and were grown under well-watered (WW; 98 ± 2% field capacity) and water-deficit (WD; 50 ± 2% field capacity) conditions for 16 days during the flower initiation stage. Data on morpho-physio-biochemical parameters and gene expression levels for these parameters were collected, and subsequently genotypes were classified either as a drought tolerant or drought susceptible one. Upregulation of GhPRP (proline-rich protein), GhP5CS (Δ1-pyrroline-5-carboxylate synthetase), and GhP5CR (Δ1-pyrroline-5-carboxylate reductase) in relation to free proline enrichment was observed in Takfa 3 genotype under WD condition. An accumulation of free proline, total soluble sugar, and potassium in plants under WD conditions was detected, which played a key role as major osmolytes controlling cellular osmotic potential. Magnesium and calcium concentrations were also enriched in leaves under WD conditions, functioning as essential elements and regulating photosynthetic abilities. Leaf greenness, net photosynthetic rate, stomatal conductance, and transpiration rate were also declined under WD conditions, leading to growth retardation, especially aboveground traits of Takfa 6, Takfa 7, Takfa 84-4, and Takfa 86-5 genotypes. An increase in leaf temperature (1.1 - 4.0 °C) and crop water stress index (CWSI > 0.75) in relation to stomatal closure and reduced transpiration rate was recorded in cotton genotypes under WD conditions compared with WW conditions. Based on the increase of free proline, soluble sugar, leaf temperature, and CWSI, as well as the decrease of aboveground growth traits and physiological attributes, five genotypes were categorized into two cluster groups: drought tolerant (Takfa 3) and drought susceptible (Takfa 6, Takfa 7, Takfa 84-4, and Takfa 86-5). The identified drought-tolerant cotton genotype, namely, Takfa 3, may be grown in areas experiencing drought conditions. It is recommended to further validate the yield traits of Takfa 3 under rainfed field conditions in drought-prone environments.

干旱胁迫对棉花(Gossypium hirsutum L)的生长、发育、产量和纤维质量产生不利影响。要制定提高耐旱性的育种策略,就必须提高对植物干旱反应的认识,从而正确识别包括棉花在内的农作物的耐旱基因型。本研究的目的是利用层次沃德聚类分析法,根据形态-生理-生化性状对所选棉花基因型的耐旱能力进行分类。研究选取了五个棉花基因型(塔克发 3 号、塔克发 6 号、塔克发 7 号、塔克发 84-4 号和塔克发 86-5 号)作为植株材料,在花期分别在水分充足(WW;98 ± 2%田间持水量)和缺水(WD;50 ± 2%田间持水量)条件下生长 16 天。收集形态-生理-生化参数数据和这些参数的基因表达水平,然后将基因型分为耐旱型和易旱型。在 WD 条件下,观察到 Takfa 3 基因型中 GhPRP(富脯氨酸蛋白)、GhP5CS(Δ1-吡咯啉-5-羧酸合成酶)和 GhP5CR(Δ1-吡咯啉-5-羧酸还原酶)的上调与游离脯氨酸富集有关。在 WD 条件下,检测到植株中游离脯氨酸、总可溶性糖和钾的积累,它们是控制细胞渗透势的主要渗透溶质。在 WD 条件下,叶片中的镁和钙浓度也有所提高,它们作为必需元素发挥着调节光合作用能力的作用。在 WD 条件下,叶片绿度、净光合速率、气孔导度和蒸腾速率也有所下降,导致生长迟缓,尤其是 Takfa 6、Takfa 7、Takfa 84-4 和 Takfa 86-5 基因型的地上部性状。与 WW 条件相比,WD 条件下棉花基因型的叶温(1.1 - 4.0 °C)和作物水分胁迫指数(CWSI > 0.75)均有所上升,这与气孔关闭和蒸腾速率降低有关。根据游离脯氨酸、可溶性糖、叶片温度和 CWSI 的增加,以及地上部生长性状和生理特性的降低,将五个基因型分为两个群组:耐旱基因型(塔克发 3 号)和易旱基因型(塔克发 6 号、塔克发 7 号、塔克发 84-4 号和塔克发 86-5 号)。已确定的耐旱棉花基因型,即 Takfa 3,可在干旱地区种植。建议在易受干旱影响的环境中,在雨水灌溉的田间条件下进一步验证 Takfa 3 的产量性状。
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引用次数: 0
Comparative analysis of miRNA expression profiles in flowering and non-flowering tissue of Crocus sativus L. 开花和不开花组织中 miRNA 表达谱的比较分析
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-07-01 Epub Date: 2024-02-10 DOI: 10.1007/s00709-024-01931-4
Archana Bhat, Sonal Mishra, Sanjana Kaul, Manoj Kumar Dhar

Crocus sativus is a valuable plant due to the presence of apocarotenoids in its stigma. Considerable work has been done in the past to understand the apocarotenoid biosynthetic pathway in saffron. However, the reports on understanding the regulation of flowering at the post-transcriptional level are meagre. The study aimed to discover the candidate miRNAs, target genes, transcription factors (TFs), and apocarotenoid biosynthetic pathway genes associated with the regulation and transition of flowering in C. sativus. In the present investigation, miRNA profiling was performed in flowering and non-flowering corms of saffron, along with expression analysis of apocarotenoid genes and transcription factors involved in the synthesis of secondary metabolites. Significant modulation in the expression of miR156, miR159, miR166, miR172, miR395, miR396, miR399, and miR408 gene families was observed. We obtained 36 known miRNAs (26 in flowering and 10 in non-flowering) and 64 novel miRNAs (40 in flowering and 24 in non-flowering) unique to specific tissues in our analysis. TFs, including CsMADS and CsMYb, showed significant modulation in expression in flowering tissue, followed by CsHB. Additionally, the miRNAs were predicted to be involved in carbohydrate metabolism, phytohormone signalling, regulation of flower development, and response to stress, cold, and defence. The comprehensive study has enhanced our understanding of the regulatory machinery comprising factors like phytohormones, abiotic stress, apocarotenoid genes, transcription factors, and miRNAs responsible for the synthesis of apocarotenoids and developmental processes during and after flowering.

藏红花是一种珍贵的植物,因为其柱头中含有类胡萝卜素。过去已经做了大量工作来了解藏红花中类芹菜素的生物合成途径。然而,有关在转录后水平了解开花调控的报告却很少。本研究旨在发现与西红花开花调控和转折相关的候选 miRNA、靶基因、转录因子(TFs)和类芹菜素生物合成途径基因。本研究对藏红花开花和不开花茎秆中的 miRNA 进行了分析,并对参与次生代谢物合成的类芹菜素基因和转录因子进行了表达分析。我们观察到 miR156、miR159、miR166、miR172、miR395、miR396、miR399 和 miR408 基因家族的表达发生了显著变化。我们在分析中获得了特定组织特有的 36 个已知 miRNA(开花期 26 个,非开花期 10 个)和 64 个新型 miRNA(开花期 40 个,非开花期 24 个)。包括 CsMADS 和 CsMYb 在内的 TFs 在开花组织中的表达有显著变化,其次是 CsHB。此外,据预测,这些 miRNAs 还参与了碳水化合物代谢、植物激素信号传导、花的发育调控以及对胁迫、寒冷和防御的响应。这项全面的研究加深了我们对植物激素、非生物胁迫、类胡萝卜素基因、转录因子和 miRNAs 等因素组成的调控机制的了解,这些因素负责类胡萝卜素的合成以及花期和花后的发育过程。
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引用次数: 0
Phytochemical composition of aerial parts and roots of Pfaffia glomerata (Spreng.) Pedersen and anticholinesterase, antioxidant, and antiglycation activities. Pfaffia glomerata (Spreng.) Pedersen 的气生部分和根的植物化学成分以及抗胆碱酯酶、抗氧化和抗糖化活性。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-07-01 Epub Date: 2024-01-10 DOI: 10.1007/s00709-023-01916-9
Rodrigo Rodrigues Franco, Rafaella Martins Franco, Allisson Benatti Justino, Ana Luiza Silva Borges, Vinícius Prado Bittar, Natieli Saito, André Lopes Saraiva, Nilson Nicolau Júnior, Wagner Campos Otoni, Foued Salmen Espindola

The Pfaffia glomerata, a plant popularly called Brazilian ginseng, is widely used in Brazil for the treatment of various pathologies, including those associated with the Central Nervous System. 20-hydroxyecdysone (20E), a phytosteroid present in this plant, can promote adaptogenic effects in the organism, providing greater body resistance to stressors. This study aimed to evaluate the phytochemical composition and the anticholinesterase, antioxidant, and antiglycation effects of extracts and fractions of aerial parts and roots of P. glomerata, also analyzing their possible cytotoxic effects. The fractions were obtained by partitioning methanol extracts from the aerial part and roots of P. glomerata with hexane, dichloromethane, ethyl acetate, n-butanol, and water. The samples were initially tested in anticholinesterase, antioxidant, and antiglycation assays, and the most promising samples were submitted for cytotoxicity and chromatographic analyses. Mass spectrometry and chromatography methods revealed that 20E was the main compound in the dichloromethane fractions, there being 35% more 20E in the aerial part (APD) than in the roots (RD). Added to the higher concentration of 20E, the APD fraction also presented more promising results than the RD fraction in anticholinesterase and antioxidant analyses, indicating that their effects may be related to the concentration of 20E. These same fractions showed no hemolytic effects but were cytotoxic in high concentrations. These new findings contribute to scientific information about P. glomerata and open more perspectives for the understanding of its therapeutic properties, allowing the association of biological activity with the presence of 20E.

巴西人参(Pfaffia glomerata)是一种俗称巴西人参的植物,在巴西被广泛用于治疗各种疾病,包括与中枢神经系统有关的疾病。20-hydroxyecdysone (20E)是一种存在于这种植物中的植物类固醇,可促进机体的适应性效应,增强机体对压力的抵抗力。本研究旨在评估植物化学成分以及肾上腺皮质激素气生部分和根的提取物和馏分的抗胆碱酯酶、抗氧化和抗糖化作用,同时分析其可能的细胞毒性作用。这些馏分是用正己烷、二氯甲烷、乙酸乙酯、正丁醇和水分配从肾上腺气生部分和根中提取的甲醇后得到的。首先对样品进行抗胆碱酯酶、抗氧化和抗糖化试验,然后将最有希望的样品提交进行细胞毒性和色谱分析。质谱法和色谱法显示,20E 是二氯甲烷馏分中的主要化合物,气生部分(APD)中的 20E 比根(RD)中的多 35%。除了 20E 浓度较高之外,在抗胆碱酯酶和抗氧化分析中,气生部分馏分也比根茎部分馏分的结果更有希望,这表明它们的作用可能与 20E 的浓度有关。这些馏分没有溶血作用,但在高浓度下具有细胞毒性。这些新发现丰富了有关肾小球藻的科学信息,为了解其治疗特性开辟了更多视角,使生物活性与 20E 的存在联系起来。
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引用次数: 0
Genome-wide identification and analysis of SPL gene family in chickpea (Cicer arietinum L.). 鹰嘴豆(Cicer arietinum L.)中 SPL 基因家族的全基因组鉴定和分析。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-07-01 Epub Date: 2024-02-21 DOI: 10.1007/s00709-024-01936-z
Shilpy Singh, Afsana Praveen, Pooja Bhadrecha

A transcription factor in plants encodes SQUAMOSA promoter binding protein-like (SPL) serves a broad spectrum of important roles for the plant, like, growth, flowering, and signal transduction. A gene family that encodes SPL proteins is documented in various model plant species, including Arabidopsis thaliana and Oryza sativa. Chickpea (Cicer arietinum), a leguminous crop, has not been thoroughly explored with regard to the SPL protein-encoding gene family. Chickpea SPL family genes were located and characterized computationally using a genomic database. Gene data of chickpea were obtained from the phytozome repository and was examined using bioinformatics methods. For investigating the possible roles of SPLs in chickpea, genome-wide characterization, expression, as well as structural analyses of this SPL gene family were performed. Cicer arietinum genome had 19 SPL genes, whereas, according to phylogenetic analysis, the SPLs in chickpea are segregated among four categories: Group-I has 2 introns, Group-II and IV have 1-2 introns (except CaSPL13 and CaSPL15 having 3 introns), and Group-III has 9 introns (except CaSPL1 and CaSPL11 with 1 and 8 introns, respectively). The SBP domain revealed that SPL proteins featured two zinc-binding sites, i.e., C3H and C2HC and one nuclear localization signal. All CaSPL proteins are found to contain highly conserved motifs, i.e., Motifs 1, 2, and 4, except CaSPL10 in which Motifs 1 and 4 were absent. Following analysis, it was found that Motifs 1 and 2 of the chickpea SBP domain are Zinc finger motifs, and Motif 4 includes a nuclear localization signal. All pairs of CaSPL paralogs developed by purifying selection. The CaSPL promoter investigation discovered cis-elements that are responsive to stress, light, and phytohormones. Examination of their expression patterns highlighted major CaSPLs to be evinced primarily among younger pods and flowers. Indicating their involvement in the plant's growth as well as development, along with their capacity to react as per different situations by handling the regulation of target gene's expression, several CaSPL genes are also expressed under certain stress conditions, namely, cold, salt, and drought. The majority of the CaSPL genes are widely expressed and play crucial roles in terms of the plant's growth, development, and responses to the environmental-stress conditions. Our work provides extensive insight into the gene family CaSPL, which might facilitate further studies related to the evolution and functions of the SPL genes for chickpea and other plant species.

植物中的一种转录因子编码 SQUAMOSA 启动子结合蛋白样(SPL),在植物的生长、开花和信号转导等方面发挥着广泛的重要作用。在拟南芥(Arabidopsis thaliana)和大豆(Oryza sativa)等多种模式植物中都有编码 SPL 蛋白的基因家族。鹰嘴豆(Cicer arietinum)作为一种豆科作物,其 SPL 蛋白编码基因家族尚未得到深入研究。利用基因组数据库对鹰嘴豆 SPL 家族基因进行了定位和特征计算。鹰嘴豆的基因数据来自植物组资源库,并使用生物信息学方法进行了检验。为了研究 SPL 在鹰嘴豆中可能发挥的作用,对 SPL 基因家族进行了全基因组表征、表达和结构分析。鹰嘴豆基因组中有 19 个 SPL 基因,而根据系统进化分析,鹰嘴豆中的 SPL 分成四类:第 I 组有 2 个内含子,第 II 组和第 IV 组有 1-2 个内含子(除了 CaSPL13 和 CaSPL15 有 3 个内含子),第 III 组有 9 个内含子(除了 CaSPL1 和 CaSPL11 分别有 1 个和 8 个内含子)。SBP结构域显示,SPL蛋白具有两个锌结合位点,即C3H和C2HC,以及一个核定位信号。所有 CaSPL 蛋白都含有高度保守的图案,即图案 1、图案 2 和图案 4,只有 CaSPL10 蛋白不含图案 1 和图案 4。经过分析发现,鹰嘴豆 SBP 结构域的动点 1 和 2 是锌指动点,动点 4 包括一个核定位信号。所有对 CaSPL 准同源物都是通过纯化选择产生的。CaSPL 启动子调查发现了对胁迫、光和植物激素有反应的顺式元件。对其表达模式的研究表明,主要的 CaSPLs 主要出现在幼嫩的豆荚和花中。一些 CaSPL 基因在某些胁迫条件(即寒冷、盐分和干旱)下也会表达,这表明它们参与了植物的生长和发育,并能通过调控目标基因的表达对不同情况做出反应。大多数 CaSPL 基因表达广泛,在植物的生长、发育和对环境胁迫条件的反应中发挥着关键作用。我们的工作为深入了解 CaSPL 基因家族提供了广阔的视野,有助于进一步研究鹰嘴豆和其他植物物种 SPL 基因的进化和功能。
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引用次数: 0
Effect of irrigation on wild and inbred maize with relation to the antioxidant status of pollens, flag leaves, and developing grains. 灌溉对野生玉米和近交系玉米的影响与花粉、旗叶和发育中谷粒的抗氧化状态有关。
IF 2.5 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-07-01 Epub Date: 2024-01-18 DOI: 10.1007/s00709-024-01926-1
Himanshu Pathak, Kamaljit Kaur, Yadhu Suneja, Gagandeep Singh, Yogesh Vikal, Gurjit Kaur

The investigation was carried out to evaluate the net effect of limited irrigation on the antioxidant status of pollens, flag leaves, and developing grains of wild and inbred maize lines. Teosinte pollens showed the highest activities of superoxide dismutase (SOD), catalase (CAT), glutathione reductase (GR), glutathione-s-transferase (GST), and peroxidase (POX) under stressful conditions while LM 11 showed a significant decrease in APX, CAT, GR, and GST activities. Limited irrigations increased the contents of superoxide and malondialdehyde (MDA) to maximum levels in LM 11 leaves. The pollens, leaves, and developing grains of teosinte had the highest content of total phenols. Proline was maximum in the developing grains of teosinte and CML 32 while lowest in those of LM 11. Principal component analysis showed that LM 11 genotype and the respective antioxidant enzymes were in completely opposite quadrants. Chord analysis showed that CAT activity and total phenol content in pollens, leaves, and developing grains contributed towards most of the variations observed in teosinte and might be responsible for managing the yield attributes of genotype during stress conditions. The pollens and leaves of teosinte, with significant SOD activity, further helped in optimizing plant yield, under stressful conditions. CML 32 occupied intermediate position owing to the unaffected activities of most of the antioxidant enzymes and high content of antioxidants in its tissues. It may be concluded that the overall antioxidant status of tissues decides the tolerance behavior of plants.

本研究旨在评估有限灌溉对野生玉米和近交系玉米花粉、旗叶和发育中谷粒抗氧化状态的净影响。在胁迫条件下,Teosinte 花粉的超氧化物歧化酶(SOD)、过氧化氢酶(CAT)、谷胱甘肽还原酶(GR)、谷胱甘肽转移酶(GST)和过氧化物酶(POX)活性最高,而 LM 11 的 APX、CAT、GR 和 GST 活性显著下降。有限的灌溉使 LM 11 叶片中的超氧化物和丙二醛(MDA)含量增加到最高水平。茶黄素的花粉、叶片和正在发育的果粒中总酚的含量最高。脯氨酸在茶树和 CML 32 发育中的谷粒中含量最高,而在 LM 11 的谷粒中含量最低。主成分分析表明,LM 11 基因型和各自的抗氧化酶完全处于相反的象限。和弦分析表明,花粉、叶片和正在发育的籽粒中的 CAT 活性和总酚含量造成了在茶树上观察到的大部分变化,可能是在胁迫条件下管理基因型产量属性的原因。在胁迫条件下,具有显著 SOD 活性的茶树花粉和叶片进一步帮助优化了植物产量。由于大多数抗氧化酶的活性未受影响,且其组织中抗氧化剂含量较高,CML 32 处于中间位置。由此可以得出结论,组织的整体抗氧化状态决定了植物的耐受性。
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Protoplasma
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