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Why some hearts heal and others don’t: The phylogenetic landscape of cardiac regenerative capacity 为什么有些心脏能愈合而有些不能:心脏再生能力的系统发育图景
IF 6.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-11 DOI: 10.1016/j.semcdb.2025.103609
Makoto Nakamura , Guo N. Huang
The limited ability of adult humans to replenish lost heart muscle cells after a heart attack has attracted scientists to explore natural heart regeneration capabilities in the animal kingdom. In particular, research has accelerated since the landmark discovery more than twenty years ago that zebrafish can completely regrow myocardial tissue. In this review, we survey heart regeneration studies in diverse model and non-model animals, aiming to gain insights into both the evolutionary trends in cardiac regenerative potential and the variations among closely related species. Differences in cardiomyogenesis, vasculature formation, and the communication between cardiovascular cells and other players have been investigated to understand the cellular basis, although the precise molecular and genetic causes underlying the stark differences in cardiac regenerative potential among certain close cousins remain largely unknown. By studying cardiovascular regeneration and repair in diverse organisms, we may uncover distinct mechanisms, offering new perspectives for advancing regenerative medicine.
成年人在心脏病发作后补充失去的心肌细胞的能力有限,这吸引了科学家们探索动物王国的自然心脏再生能力。特别是,自二十多年前具有里程碑意义的发现斑马鱼可以完全再生心肌组织以来,研究已经加速。在这篇综述中,我们回顾了不同模型动物和非模型动物的心脏再生研究,旨在了解心脏再生潜力的进化趋势以及密切相关物种之间的差异。研究人员已经研究了心肌发生、脉管系统形成以及心血管细胞和其他细胞之间的交流方面的差异,以了解细胞基础,尽管在某些近亲之间,导致心脏再生潜力明显差异的确切分子和遗传原因在很大程度上仍然未知。通过研究不同生物体的心血管再生和修复,我们可能会发现不同的机制,为推进再生医学提供新的视角。
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引用次数: 0
Mechanical force-driven cell competition ensures robust morphogen gradient formation 机械力驱动的细胞竞争确保了强大的形态梯度形成
IF 6.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-13 DOI: 10.1016/j.semcdb.2025.103607
Kana Aoki , Tohru Ishitani
Morphogen gradients provide positional data and maintain tissue patterns by instructing cells to adopt distinct fates. In contrast, morphogen gradient-forming tissues undergo dynamic morphogenetic movements that generate mechanical forces and can disturb morphogen signal transduction. However, the interactions between morphogen gradients and these forces remain largely unknown. In this study, we described how mechanical force-mediated cell competition corrects noisy morphogen gradients to ensure robust tissue patterns. The Wnt/β-catenin morphogen gradient—that patterns the embryonic anterior-posterior axis—generates cadherin-actomyosin interaction-mediated intercellular tension gradients—termed mechano-gradients. Naturally generated unfit cells that produce noisy Wnt/β-catenin gradients induce local deformation of the mechano-gradients. Neighboring fit cells sense this deformation, resulting in the activation of Piezo family mechanosensitive calcium channels and secretion of annexinA1, which specifically kills unfit cells to recover morphogen gradients. Therefore, mechanical force-mediated cell competition between the morphogen-receiver cells supports robust gradient formation. Additionally, we discuss the potential roles of mechanical force-driven cell competition in other contexts, including organogenesis and cancer.
形态发生梯度提供位置数据,并通过指示细胞采用不同的命运来维持组织模式。相反,形成形态发生梯度的组织会发生动态的形态发生运动,产生机械力并干扰形态发生信号转导。然而,形态发生梯度与这些力之间的相互作用在很大程度上仍是未知的。在这项研究中,我们描述了机械力介导的细胞竞争如何纠正嘈杂的形态发生梯度,以确保稳健的组织模式。Wnt/β-catenin形态发生梯度--胚胎前后轴的模式--产生了由粘连蛋白-肌动蛋白相互作用介导的细胞间张力梯度--即机械梯度。自然生成的不适合细胞会产生嘈杂的 Wnt/β-catenin 梯度,导致机械梯度局部变形。邻近的适合细胞会感知到这种变形,从而激活 Piezo 家族机械敏感钙通道并分泌附件素 A1,专门杀死不适合细胞以恢复形态发生梯度。因此,由机械力介导的形态发生器-受体细胞之间的细胞竞争支持了稳健梯度的形成。此外,我们还讨论了机械力驱动的细胞竞争在器官发生和癌症等其他情况下的潜在作用。
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引用次数: 0
Emerging roles for microproteins as critical regulators of endoplasmic reticulum function and cellular homeostasis 微蛋白作为内质网功能和细胞稳态的关键调节因子的新角色
IF 6.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-17 DOI: 10.1016/j.semcdb.2025.103608
Taylor M. Coughlin , Catherine A. Makarewich
The endoplasmic reticulum (ER) is a multifunctional organelle essential for key cellular processes including protein synthesis, calcium homeostasis, and the cellular stress response. It is composed of distinct domains, such as the rough and smooth ER, as well as membrane regions that facilitate direct communication with other organelles, enabling its diverse functions. While many well-characterized ER proteins contribute to these processes, recent studies have revealed a previously underappreciated class of small proteins that play critical regulatory roles. Microproteins, typically under 100 amino acids in length, were historically overlooked due to size-based biases in genome annotation and often misannotated as noncoding RNAs. Advances in ribosome profiling, mass spectrometry, and computational approaches have now enabled the discovery of numerous previously unrecognized microproteins, significantly expanding our understanding of the proteome. While some ER-associated microproteins, such as phospholamban and sarcolipin, were identified decades ago, newly discovered microproteins share similar fundamental characteristics, underscoring the need to refine our understanding of the coding potential of the genome. Molecular studies have demonstrated that ER microproteins play essential roles in calcium regulation, ER stress response, organelle communication, and protein translocation. Moreover, growing evidence suggests that ER microproteins contribute to cellular homeostasis and are implicated in disease processes, including cardiovascular disease and cancer. This review examines the shared and unique functions of ER microproteins, their implications for health and disease, and their potential as therapeutic targets for conditions associated with ER dysfunction.
内质网(ER)是一个多功能细胞器,对蛋白质合成、钙稳态和细胞应激反应等关键细胞过程至关重要。它由不同的结构域组成,如粗糙的内质网和光滑的内质网,以及促进与其他细胞器直接通信的膜区域,使其具有多种功能。虽然许多特性明确的内质网蛋白参与了这些过程,但最近的研究揭示了以前未被重视的一类小蛋白,它们起着关键的调节作用。微蛋白通常长度在100个氨基酸以下,由于基因组注释中基于大小的偏差,在历史上被忽视,并且经常被错误地注释为非编码rna。核糖体谱分析、质谱分析和计算方法的进步使许多以前未被识别的微蛋白得以发现,极大地扩展了我们对蛋白质组的理解。虽然一些内质网相关的微蛋白,如磷蛋白和肌磷脂,在几十年前就被发现了,但新发现的微蛋白具有相似的基本特征,这强调了我们需要完善对基因组编码潜力的理解。分子研究表明,内质网微蛋白在钙调节、内质网应激反应、细胞器通讯和蛋白质易位等方面发挥着重要作用。此外,越来越多的证据表明内质网微蛋白有助于细胞稳态,并与疾病过程有关,包括心血管疾病和癌症。本文综述了内质网微蛋白的共同和独特功能,它们对健康和疾病的影响,以及它们作为内质网功能障碍相关疾病的治疗靶点的潜力。
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引用次数: 0
Cardiac enhancers: Gateway to the regulatory mechanisms of heart regeneration 心脏增强剂:心脏再生调控机制的门户
IF 6.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-04-10 DOI: 10.1016/j.semcdb.2025.103610
Ian J. Begeman, Megan E. Guyer, Junsu Kang
The adult mammalian heart has limited regenerative capacity. Cardiac injury, such as a myocardial infarction (MI), leads to permanent scarring and impaired heart function. In contrast, neonatal mice and zebrafish possess the ability to repair injured hearts. Cardiac regeneration is driven by profound transcriptional changes, which are controlled by gene regulatory elements, such as tissue regeneration enhancer elements (TREEs). Here, we review recent studies on cardiac injury/regeneration enhancers across species. We further explore regulatory mechanisms governing TREE activities and their associated binding regulators. We also discuss the potential of TREE engineering and how these enhancers can be utilized for heart repair. Decoding the regulatory logic of cardiac regeneration enhancers presents a promising avenue for understanding heart regeneration and advancing therapeutic strategies for heart failure.
成年哺乳动物的心脏再生能力有限。心脏损伤,如心肌梗死(MI),会导致永久性疤痕和心功能受损。相比之下,新生小鼠和斑马鱼具有修复受伤心脏的能力。心脏再生是由深刻的转录变化驱动的,这是由基因调控元件控制的,如组织再生增强元件(TREEs)。在这里,我们回顾了最近关于跨物种心脏损伤/再生促进剂的研究。我们进一步探讨了TREE活动的调控机制及其相关的约束调控因子。我们还讨论了TREE工程的潜力以及如何将这些增强子用于心脏修复。解码心脏再生促进因子的调控逻辑为理解心脏再生和推进心力衰竭的治疗策略提供了一条有希望的途径。
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引用次数: 0
Death fuels growth: Emerging players bridging apoptosis and cell proliferation in Drosophila and beyond 死亡促进生长:在果蝇和其他物种中连接细胞凋亡和细胞增殖的新兴参与者
IF 6.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-05-01 Epub Date: 2025-03-12 DOI: 10.1016/j.semcdb.2025.103602
Caitlin Hounsell, Yun Fan
Tissue homeostasis relies on a delicate balance between cell death and proliferation. Apoptosis plays a key role not only in removing damaged cells but also in promoting tissue recovery through a process known as apoptosis-induced proliferation (AiP). This review highlights how caspases, c-Jun N-terminal Kinase (JNK), and Reactive Oxygen Species (ROS) bridge cell death and proliferation, as revealed through studies using Drosophila as a model organism. We also compare these findings with advances in other model systems and discuss their broader implications for tissue regeneration and tumorigenesis.
组织稳态依赖于细胞死亡和增殖之间的微妙平衡。细胞凋亡不仅在清除受损细胞中起着关键作用,而且还通过称为凋亡诱导增殖(AiP)的过程促进组织恢复。本文综述了半胱天冬酶、c-Jun n -末端激酶(JNK)和活性氧(ROS)如何架起细胞死亡和增殖的桥梁,这是通过果蝇作为模式生物的研究发现的。我们还将这些发现与其他模型系统的进展进行了比较,并讨论了它们对组织再生和肿瘤发生的更广泛意义。
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引用次数: 0
Cilia and flagella – Current understanding and recent advances in divergent experimental systems 纤毛和鞭毛——目前对不同实验系统的理解和最新进展
IF 6.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-05-01 Epub Date: 2025-04-03 DOI: 10.1016/j.semcdb.2025.103606
Junmin Pan
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引用次数: 0
Geometric factors for cell arrangement: How do cells determine their position in vivo? 细胞排列的几何因素:细胞如何决定它们在体内的位置?
IF 6.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-05-01 Epub Date: 2025-04-05 DOI: 10.1016/j.semcdb.2025.103604
Sungrim Seirin-Lee , Akatsuki Kimura
The spatial arrangement of cells plays a crucial role in ensuring robust development of organisms, directing cells to their specific fates in the right place and at the right time. In early embryogenesis, the cell arrangement is determined by several factors such as the cell division axis, cell-cell interactions, and surrounding geometric constraints. While many species utilize similar principles to determine the cell arrangement, the precise dynamics of cell arrangement differ among species, even at early stages. In particular, geometric constraints significantly impact cell arrangement. Nematode species exhibit diverse cell arrangement dynamics due to their rigid eggshells, which intensively confine the internal cells. In this paper, we review the mechanisms of cell arrangement with a focus on geometric constraints, drawing from interdisciplinary perspectives. We also review mathematical models developed to enhance our understanding of these mechanisms and discuss future directions for theoretical approaches in exploring geometric effects on cell arrangement in various tissues of various species.
细胞的空间排列在确保生物体的健壮发育中起着至关重要的作用,在正确的地点和正确的时间引导细胞走向其特定的命运。在早期胚胎发生中,细胞排列是由几个因素决定的,如细胞分裂轴、细胞间相互作用和周围的几何约束。虽然许多物种利用类似的原理来确定细胞排列,但物种之间细胞排列的精确动力学是不同的,甚至在早期阶段。特别是,几何约束显著影响单元的排列。线虫物种由于其坚硬的蛋壳而表现出不同的细胞排列动力学,这强烈地限制了内部细胞。在本文中,我们回顾了细胞排列的机制,重点是几何约束,从跨学科的角度绘制。我们还回顾了数学模型的发展,以加强我们对这些机制的理解,并讨论了在探索不同物种的各种组织中细胞排列的几何效应的理论方法的未来方向。
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引用次数: 0
Cell death in regeneration and cell turnover: Lessons from planarians and Drosophila 再生和细胞更新中的细胞死亡:来自涡虫和果蝇的教训
IF 6.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-05-01 Epub Date: 2025-03-25 DOI: 10.1016/j.semcdb.2025.103605
Teresa Adell, Francesc Cebrià, Josep F. Abril, Sofia J. Araújo, Montserrat Corominas, Marta Morey, Florenci Serras, Cristina González-Estévez
Programmed cell death plays a crucial role during tissue turnover in all animal species, and it is also essential during regeneration, serving as a key signalling mechanism to promote tissue repair and regrowth. In freshwater planarians, remarkable regenerative abilities are supported by neoblasts, a population of adult stem cells, which enable high somatic cell turnover. Cell death in planarians occurs continuously during regeneration and adult homeostasis, underscoring its critical role in tissue remodeling and repair. However, the exact mechanisms regulating cell death in these organisms remain elusive. In contrast, Drosophila melanogaster serves as a powerful model for studying programmed cell death in development, metamorphosis, and adult tissue maintenance, leveraging advanced genetic tools and visualization techniques. In Drosophila, cell death sculpts tissues, eliminates larval structures during metamorphosis, and supports homeostasis in adulthood. Despite limited regenerative capacity compared to planarians, Drosophila provides unique insights into cell death's regulatory mechanisms. Comparative analysis of these two systems highlights both conserved and divergent roles of programmed cell death in tissue renewal and regeneration. This review synthesizes the latest knowledge of programmed cell death in planarians and Drosophila, aiming to illuminate shared principles and system-specific adaptations, with relevance to tissue repair across biological systems.
程序性细胞死亡在所有动物物种的组织更新过程中起着至关重要的作用,在再生过程中也是必不可少的,是促进组织修复和再生的关键信号机制。在淡水涡虫中,卓越的再生能力是由新生细胞支持的,新生细胞是一群成体干细胞,能够实现高体细胞周转率。涡虫的细胞死亡在再生和成体稳态过程中不断发生,强调了其在组织重塑和修复中的关键作用。然而,在这些生物体中调节细胞死亡的确切机制仍然是难以捉摸的。相比之下,利用先进的遗传工具和可视化技术,黑腹果蝇可以作为研究发育、变态和成体组织维持过程中程序性细胞死亡的强大模型。在果蝇中,细胞死亡雕刻组织,在蜕变过程中消除幼虫结构,并支持成年期的体内平衡。尽管与涡虫相比,果蝇的再生能力有限,但它对细胞死亡的调控机制提供了独特的见解。这两个系统的比较分析强调了程序性细胞死亡在组织更新和再生中的保守和不同的作用。本综述综合了涡虫和果蝇程序性细胞死亡的最新知识,旨在阐明与生物系统组织修复相关的共同原则和系统特异性适应。
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引用次数: 0
The ever-diversifying landscape of intra-genomic conflict 不断多样化的基因组内部冲突
IF 6.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-05-01 Epub Date: 2025-03-26 DOI: 10.1016/j.semcdb.2025.103603
Mia T. Levine, Sarah E. Zanders
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引用次数: 0
Epithelial apoptosis: A back-and-forth mechanical interplay between the dying cell and its surroundings 上皮细胞凋亡:濒死细胞与周围环境之间来回的机械相互作用
IF 6.2 2区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-04-01 Epub Date: 2025-02-21 DOI: 10.1016/j.semcdb.2025.02.001
Stéphanie Arnould , Corinne Benassayag , Tatiana Merle , Bruno Monier , Marianne Montemurro , Magali Suzanne
Apoptosis is an essential cellular process corresponding to a programmed cell suicide. It has long been considered as a cell-autonomous process, supposed to have no particular impact on the surrounding tissue. However, it has become clear in the last 15 years that epithelial apoptotic cells interact mechanically and biochemically with their environment. Here, we explore recent literature on apoptotic mechanics from an individual dying cell to the back-and-forth interplay with the neighboring epithelial tissue. Finally, we discuss how caspases, key regulators of apoptosis, appear to have a dual function as a cytoskeleton regulator favoring either cytoskeleton degradation or dynamics independently of their apoptotic or non-apoptotic role.
细胞凋亡是细胞程序性自杀的基本过程。长期以来,它一直被认为是一种细胞自主过程,对周围组织没有特别的影响。然而,在过去的15年中,上皮细胞凋亡与环境的机械和生化相互作用已经变得很清楚。在这里,我们探索了最近关于凋亡机制的文献,从单个垂死细胞到与邻近上皮组织的来回相互作用。最后,我们讨论了半胱天冬酶,细胞凋亡的关键调节因子,似乎具有双重功能,作为细胞骨架调节因子,有利于细胞骨架降解或动力学,独立于其凋亡或非凋亡作用。
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引用次数: 0
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Seminars in cell & developmental biology
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