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Subsoil rhizosphere carbon enrichment and depletion: processes and scaling in tree-based systems 地下根际碳富集和消耗:树木系统的过程和结垢
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-01-27 DOI: 10.1016/j.soilbio.2026.110103
Gabin Piton , Elisa Taschen , Clara Ducrocq , Soline Martin-Blangy , Laurie Amenc , Pauline Castel , Damien Dezette , Rémi Dugué , Marion Forest , Philippe Hinsinger , Benoit Marie , Aline Personne , Manoël Seignon , Jerôme Ngao , Christophe Jourdan , Isabelle Bertrand
Tree roots have the potential to release carbon into deep soil layers, where this carbon is generally considered to exhibit greater stability. However, field studies that investigate the drivers of the soil organic carbon (SOC) balance in the rhizosphere of trees across soil depths and that upscale this balance to the whole soil profile are lacking. This study presents an innovative approach integrating normalized rhizosphere sampling and root density mapping to a depth of 1.5 m under trees from Mediterranean agroforestry and a tree plantation. The estimated SOC balance in the rhizosphere of the Robinia pseudoacacia trees varied from −38 kg C ha−1 to +53 kg C ha−1 at the different soil horizons, with a neutral balance at 0–0.3 m, a negative balance at 0.3–0.5 m and a positive balance at 0.5–1.0 m and 1.0–1.5 m of soil depth. When scaled up to the whole profile, the value was +50.6 kg C ha−1 for the tree plantation and +72.4 kg C ha−1 for the tree row for the agroforestry system, with no significant difference between these two estimates. The balance between hydrolytic and oxidative enzyme activities and between fungal guilds indicated increasing nutritional constraints for microbial saprotrophs at depth. In the subsoil, these nutritional constraints were locally attenuated in the rhizosphere, inducing a substantial increase in microbial abundance and triggering a pronounced shift from oligotrophic to copiotrophic communities, which in turn supported SOC enrichment. In the topsoil, the lower chemical complexity of substrates available to microorganisms increases susceptibility to saprotrophic activity, which likely underlies the observed neutral or negative SOC balances in the rhizosphere. This field study presents a scalable approach for quantifying the rhizosphere SOC balance in deep soil horizons and disentangling its biogeochemical drivers.
树根有可能将碳释放到深层土壤中,这些碳通常被认为在那里表现出更大的稳定性。然而,研究树木根际土壤有机碳平衡的驱动因素并将其提升到整个土壤剖面的实地研究缺乏。本研究提出了一种整合标准化根际采样和根密度测绘至1.5 m深度的地中海农林业和人工林树下的原始方法。不同土层刺槐根际有机碳平衡在-38 ~ +53 kg C ha-1之间变化,0 ~ 0.3 m处为中性平衡,0.3 ~ 0.5 m处为负平衡,0.5 ~ 1.0 m和1.0 ~ 1.5 m处为正平衡。当放大到整个剖面时,人工林的值为+50.6 kg C ha-1,农林复合系统的树行值为+72.4 kg C ha-1,两者之间没有显著差异。水解酶和氧化酶活性之间的平衡以及真菌行会之间的平衡表明,深层腐生微生物的营养限制在增加。在地下土壤中,这些营养限制在根际被局部减弱,导致微生物丰度大幅增加,并引发从贫营养群落向富营养群落的明显转变,从而支持有机碳的富集。在表层土壤中,微生物可利用的基质的化学复杂性较低,增加了对腐坏活性的敏感性,这可能是根际观察到的中性或负SOC平衡的基础。本研究提出了一种量化深层土壤根际有机碳平衡并解开其生物地球化学驱动因素的可扩展方法。
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引用次数: 0
Shoot litter outweighs root inputs in building soil organic carbon during Spartina alterniflora invasion in a coastal wetland 互花米草入侵过程中,枯枝凋落物对土壤有机碳的贡献大于根系输入
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-01-26 DOI: 10.1016/j.soilbio.2026.110104
Yamin Chen , Yanghui He , Lingyan Zhou , Peter M. Homyak , Guiyao Zhou , Kaiyan Zhai , Diandian Wei , Boyun Tian , Xuhui Zhou
Coastal salt marsh wetlands are highly productive ecosystems with carbon (C) sequestration rates up to 40–50 times higher than forests, making them a major biome for climate change mitigation. However, plant invasions driven by human activities are altering vegetation composition, C allocation, decomposition dynamics, and ultimately the fate of soil organic C (SOC). Here we conducted a 4-year field-based mesocosm experiment to simulate the invasion of the C4 plant, Spartina alterniflora Loisel, into C3 plant-dominated coastal wetland soils and to quantify the relative contributions of above- and below-ground litter inputs to SOC formation. Taking advantage of the δ13C contrast between C3 and C4 plants, we showed that S. alterniflora-derived SOC increased by 9 % after four years, with aboveground litter contributing 12 times more C to the SOC pool than belowground root litter. Litter addition preferentially enriched S. alterniflora-derived C in macro-aggregate fractions by 10 %, while slightly reducing its contribution in the clay fractions, indicative of accelerated decomposition of native mineral-associated organic matter (“priming”). Litter inputs also enhanced soil CO2 efflux, and its close correlation with soil δ13C signatures indicates that the decomposition of the added plant litter was the primary source of the newly cycled C. These findings challenge terrestrial paradigm that belowground inputs dominate long-term SOC sequestration, highlighting the pivotal role of aboveground litter in governing C cycling and storage at the terrestrial-aquatic interface.
沿海盐沼湿地是生产力很高的生态系统,其碳(C)固存率比森林高40-50倍,使其成为减缓气候变化的主要生物群落。然而,人类活动驱动的植物入侵正在改变植被组成、碳分配、分解动态,并最终改变土壤有机碳(SOC)的命运。本研究通过4年的野外生态实验,模拟了C4植物互花米草(Spartina interniflora Loisel)对C3植物为主的滨海湿地土壤的入侵,量化了地上和地下凋落物输入对有机碳形成的相对贡献。利用C3和C4植物的δ13C对比,我们发现交替花s来源的有机碳在4年后增加了9%,地上凋落物对有机碳库的贡献是地下凋落物的12倍。凋落物添加优先增加了大团聚体组分中互花草衍生C的10%,而在粘土组分中的贡献略有降低,表明原生矿物相关有机质的分解加速(“启动”)。凋落物输入也增强了土壤CO2外排,其与土壤δ13C特征的密切相关表明,增加的植物凋落物的分解是新循环C的主要来源。这些发现挑战了地下输入主导长期有机碳封存的陆地范式,突出了地上凋落物在控制陆地-水界面碳循环和储存中的关键作用。
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引用次数: 0
SOC stabilisation shifts from carbon accumulation in temperate soils to mineral association in subtropical soils 有机碳稳定从温带土壤的碳积累转向亚热带土壤的矿物结合
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-01-23 DOI: 10.1016/j.soilbio.2026.110101
Yijia Tang, Thi Kim Anh Tran, Budiman Minasny, Shiva Bakhshandeh, Mingming Du, Nicolas Francos, Yin-Chung Huang, Ho Jun Jang, Wartini Ng, Peipei Xue, Alex McBratney
Soil organic carbon (SOC) is operationally partitioned into particulate organic carbon (POC) and mineral-associated organic carbon (MAOC) to infer soil carbon persistence and sensitivity to disturbance or management. Yet the combined roles of climate, mineralogy, and land use in shaping these fractions remain unresolved across continental gradients. Here, we analysed 249 Australian topsoils from 65 paired sites along a 550 mm rainfall isohyet. Samples were grouped into four climate–texture clusters (Subtropical Coarse, Subtropical Fine, Temperate Coarse, Temperate Fine) to disentangle the effects of thermal and hydrological regimes, soil properties, and land use on SOC partitioning and stabilisation. Subtropical soils consistently exhibited a high proportion of MAOC (fMAOC ≈ 0.8) despite low SOC stocks, reflecting preferential retention of mineral–organic interactions under carbon-limited and water-stressed conditions. In contrast, temperate soils stored greater SOC and POC, indicating higher carbon inputs and slower decomposition. In subtropical fine-textured soils, agriculture elevated fMAOC through microbial activity and nutrient inputs, yet this occurred alongside depleted SOC and POC, highlighting a trade-off between stabilisation efficiency and carbon stock depletion. Across all clusters, land use effects were detectable but secondary to climate and mineral properties. These findings show that temperate and subtropical soils follow contrasting carbon stabilisation pathways: temperate systems store more carbon overall, while subtropical systems allocate a larger share of their carbon to mineral-associated carbon. Our climate–texture framework highlights region-specific management priorities: enhancing mineral–organic interactions through increased root inputs and organic or mineral amendments in subtropical soils, and protecting vulnerable carbon stocks through reduced disturbance and residue retention in temperate systems.
土壤有机碳(SOC)在操作上分为颗粒有机碳(POC)和矿物相关有机碳(MAOC),以推断土壤碳的持久性和对干扰或管理的敏感性。然而,气候、矿物学和土地利用在形成这些部分中的综合作用在整个大陆梯度上仍未得到解决。在这里,我们沿着550毫米降雨等雨量线分析了来自65个成对地点的249个澳大利亚表土。样本被分为4个气候结构集群(亚热带粗、亚热带细、温带粗、温带细),以理清热水文制度、土壤性质和土地利用对有机碳分配和稳定的影响。亚热带土壤在有机碳储量较低的情况下,仍表现出较高的MAOC比例(fMAOC≈0.8),反映出在碳限制和水分胁迫条件下矿物-有机相互作用的优先保留。相比之下,温带土壤的SOC和POC储量更高,表明碳输入更高,分解速度更慢。在亚热带细质土壤中,农业通过微生物活动和养分投入提高了fMAOC,但这与SOC和POC的耗尽同时发生,突出了稳定效率和碳储量枯竭之间的权衡。在所有集群中,土地利用效应都是可检测到的,但次于气候和矿物性质。这些发现表明,温带和亚热带土壤遵循截然不同的碳稳定途径:温带系统总体上储存更多的碳,而亚热带系统将其碳分配给矿物相关碳的比例更大。我们的气候结构框架强调了特定区域的管理重点:通过增加亚热带土壤的根系投入和有机或矿物修正来加强矿物-有机相互作用,并通过减少温带系统的干扰和残留物保留来保护脆弱的碳储量。
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引用次数: 0
Long-term warming and vegetation change have no impact on microbial resistance to drought, but destabilise microbial communities and microbially-mediated functions 长期的气候变暖和植被变化对微生物抗旱能力没有影响,但会破坏微生物群落的稳定性和微生物介导的功能
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-01-21 DOI: 10.1016/j.soilbio.2026.110100
Ellen L. Fry , Amy L. Evans , Deborah Ashworth , Ana Soto , Juntao Wang , Nick Ostle , Brajesh K. Singh , Richard D. Bardgett
Climate change presents multiple stresses to ecosystems that operate over different timescales, such as long-term warming and short-term drought. It is well established that soil microbial communities are highly responsive to individual stresses, but how they respond combined warming and drought, and how factors such as vegetation change moderate responses, remains uncertain. Here we tested whether long-term passive warming modifies the resistance (amplitude of response) and resilience (degree and duration of recovery) of soil microbial communities to short-term drought. We also tested whether warming effects on microbial resilience to drought are moderated by vegetation composition, and specifically the presence of ericaceous dwarf shrubs, the dominant vegetation type of peatland. This was tested using soil from a nine-year warming and vegetation manipulation experiment established on blanket peatland in northern England. We completed a subsequent laboratory study designed to quantify resistance and resilience of microbial communities and microbial-mediated functions to drought. Neither long-term warming nor shrub removal impacted the resistance of microbial communities to drought. However, resilience of bacterial diversity to drought was decreased by warming (fold change 0.38) and shrub removal (fold change 0.27). Notably the interaction between warming and shrub removal resulted in higher resilience of bacterial diversity than individual treatments (fold change 0.58; warming x shrub removal: p = 0.008). Further, warming and shrub removal individually increased the diversity of fungal communities, and reduced resilience of fungal diversity to drought (fold change of warmed against unwarmed 0.11, shrub removal against control 0.39, combination against control 0.59; warming x shrub removal p = 0.006). Warming also strongly decreased resilience, but not resistance, of nitrogen-based functions to drought, although shrub removal dampened this effect. Our findings demonstrate potential for long-term warming and vegetation change to modify microbial responses to extreme drought events, with implications for peatland carbon and nitrogen cycling under future climate scenarios.
气候变化给在不同时间尺度上运行的生态系统带来多重压力,如长期变暖和短期干旱。众所周知,土壤微生物群落对个体胁迫具有高度的响应,但它们如何对增温和干旱共同作用作出响应,以及植被等因素如何改变适度的响应,仍不确定。在这里,我们测试了长期被动变暖是否会改变土壤微生物群落对短期干旱的抗性(响应幅度)和弹性(恢复程度和持续时间)。我们还测试了气候变暖对微生物抗旱能力的影响是否受到植被组成的调节,特别是泥炭地主要植被类型白垩矮灌木的存在。这是在英格兰北部地毯式泥炭地进行的一项为期9年的变暖和植被控制实验中的土壤进行的测试。我们随后完成了一项实验室研究,旨在量化微生物群落对干旱的抗性和恢复力以及微生物介导的功能。长期增温和灌木砍伐都没有影响微生物群落的抗旱性。增温(倍数变化0.38)和灌木砍伐(倍数变化0.27)降低了细菌多样性的抗旱能力。值得注意的是,与单独处理相比,增温和灌木去除之间的相互作用导致细菌多样性的恢复力更高(倍数变化0.58;增温x灌木去除:p = 0.008)。增温和灌木去除分别增加了真菌群落的多样性,降低了真菌多样性对干旱的适应能力(增温与未增温的倍数变化为0.11,增温与对照的倍数变化为0.39,增温与对照的倍数变化为0.59,增温与灌木去除的倍数变化p = 0.006)。变暖也强烈降低了氮基功能对干旱的恢复力,而不是抗性,尽管灌木的移除抑制了这种影响。我们的研究结果表明,长期的气候变暖和植被变化可能会改变微生物对极端干旱事件的反应,这对未来气候情景下泥炭地的碳和氮循环有影响。
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引用次数: 0
Viruses regulate soil C:N stoichiometry by boosting C-cycling under long-term N fertilization 在长期施氮条件下,病毒通过促进碳循环调节土壤碳氮化学计量
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-01-21 DOI: 10.1016/j.soilbio.2026.110097
Hanpeng Liao , Chen Liu , Tian Gao , Chaofan Ai , Ning Ling , Shuping Qin , Chunsheng Hu , Dong Zhang , Xiang Tang , Ville-Petri Friman , Shungui Zhou
Although viruses are increasingly recognized as important contributors of soil carbon (C) cycling, their role in regulating soil C:N stoichiometry remains largely unclear. Here, we combined multi-omics approaches (viromics and metagenomics) with direct microcosm experiments to investigate viral contributions to soil C:N stoichiometry across three long-term fertilization field sites in China. Soils receiving long-term high N input exhibited distinct shifts in both taxonomic composition and functional gene profiles, with viruses showing a particularly strong contribution to C cycling. Mechanistically, soil viral and bacterial communities responded differentially to prolonged N enrichment, with viral communities exhibiting greater sensitivity to long-term N application. N addition reshaped the functional potential of both communities, with more pronounced changes in viral richness and virus–bacteria interactions. Elevated N levels enriched polyvalent viruses and increased the abundance of viral auxiliary metabolic genes involved in carbohydrate degradation. Direct experiments using viral transplants and metagenomic-stable isotope probing further confirmed that viruses can directly regulate nutrient cycling. Overall, our results demonstrate that soil viromes play a key role in regulating C cycling in ways that buffer N-induced shifts in soil C:N ratios by reshaping the taxonomic and functional composition of soil microbial communities.
尽管人们越来越认识到病毒是土壤碳(C)循环的重要贡献者,但它们在调节土壤碳氮化学计量中的作用在很大程度上仍不清楚。在这里,我们将多组学方法(病毒组学和宏基因组学)与直接的微观实验相结合,研究了病毒对中国三个长期施肥点土壤C:N化学计量的贡献。长期接受高氮输入的土壤在分类组成和功能基因谱上都表现出明显的变化,其中病毒对碳循环的贡献尤其强烈。从机制上讲,土壤病毒和细菌群落对长期氮富集的反应不同,病毒群落对长期施氮表现出更大的敏感性。N的添加重塑了两个群落的功能潜力,在病毒丰富度和病毒-细菌相互作用方面发生了更明显的变化。升高的N水平使多价病毒富集,并增加了参与碳水化合物降解的病毒辅助代谢基因的丰度。利用病毒移植和宏基因组稳定同位素探测的直接实验进一步证实了病毒可以直接调节养分循环。总体而言,我们的研究结果表明,土壤病毒组通过重塑土壤微生物群落的分类和功能组成,在调节碳循环中发挥关键作用,缓冲氮诱导的土壤碳氮比变化。
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引用次数: 0
How nitrifiers denitrify? 硝化剂如何反硝化?
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-01-20 DOI: 10.1016/j.soilbio.2026.110098
Kaihang Zhang, Lei Cheng
The sources of nitrous oxide (N2O), a potent and long-lived greenhouse gas, remain highly uncertain. This uncertainty arises largely from limited understanding of nitrifier denitrification, the reduction of nitrite by ammonia oxidizing bacteria (AOB) (Zhu et al., 2013). Here, we propose a novel conceptual framework to address the long-standing question of whether AOB could persist via nitrifier denitrification under hypoxic and/or anoxic conditions. We present an analysis of recent advances in nitrite and nitric oxide (NO) reductase enzymology (Murali et al., 2024) which suggests that AOB could utilize heme-copper-containing NO reductase (sNOR)-mediated nitrifier denitrification to generate proton motive force and conserve energy during anaerobic respiration. Our phylogenetic analysis further shows that sNOR is present in nearly 96 % of sequenced AOB genomes. We therefore suggest that sNOR-mediated nitrifier denitrification may represent a substantial, and likely increasing, contribution to global N2O emissions, particularly in aquatic and lowland ecosystems under future climate change-induced global deoxygenation conditions.
一氧化二氮(N2O)是一种强效且长寿命的温室气体,其来源仍然高度不确定。这种不确定性主要源于对硝化菌反硝化作用的有限理解,即氨氧化细菌(AOB)对亚硝酸盐的还原(Zhu et al., 2013)。在这里,我们提出了一个新的概念框架来解决长期存在的问题,即在缺氧和/或缺氧条件下,AOB是否可以通过硝化器反硝化持续存在。我们对亚硝酸盐和一氧化氮还原酶(NO)酶学的最新进展进行了分析(Murali et al., 2024),表明AOB可以利用含血红素-铜的NO还原酶(sNOR)介导的硝化物反硝化作用来产生质子动力并在厌氧呼吸过程中保存能量。我们的系统发育分析进一步表明,sNOR存在于近96%的测序AOB基因组中。因此,我们认为,在未来气候变化引起的全球脱氧条件下,snorr介导的硝化物反硝化作用可能对全球N2O排放做出了实质性的贡献,并且可能会增加,特别是在水生和低地生态系统中。
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引用次数: 0
Additional carbon conversion driven by microbial metabolic limitations in long-term phosphorus-fertilized soil: The role of reactive oxygen species 长期磷肥土壤微生物代谢限制驱动的额外碳转化:活性氧的作用
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-01-19 DOI: 10.1016/j.soilbio.2026.110095
Yuanyuan Ding , Na Chen , Bin Jia , Huiqiang Yang , Fuhao Liu , Kangjie Yang , Zhiqiang Wang , Jianjun Qin , Jia Xie , Yingfei Cao , Xueyun Yang , Hanzhong Jia
Reactive oxygen species (ROS) are important drivers of soil carbon (C) turnover, but how ROS production responds to phosphorus (P) application and participates in C turnover remain unclear. Based on a six-year P fertilizer application experiments, we found that P application decreased superoxide (O2•−) content by 36 % and 69 % in high- and low-fertility soils, respectively, whereas it increased hydroxyl radical (OH) content by 90 % in high-fertility soils, but had minimal impact in low-fertility soils. After gamma sterilization, O2•− content and OH content decreased by approximately 54 % and 51 % respectively, indicating the significant role of microorganisms in ROS production. Random forest analysis identified microbial C limitation and P limitation as drivers of O2•− and OH production, respectively. Aggravated microbial C limitation with P fertilization may inhibit the biotic O2•− generation by reducing the relative abundance of copiotrophic bacteria (primarily Alphaproteobacteria and Betaproteobacteria). Incubation experiments confirmed this inhibitory effect, and demonstrated that the mitigation of microbial P limitation with P fertilization promotes OH production in Fenton-like reactions by increasing the content of surface-adsorbed Fe(II) and Fe(II) in low-crystallinity minerals. The increase in the Fe(II) contents were attributed to iron-reducing microorganism, as confirmed by sterilization experiments. Additionally, incubation experiments further revealed that microbial C–P co-limits has a stronger negative effect on ROS content than a single limitation, which likely explains the lower ROS levels in low-fertility soils with more pronounced C–P co-limitation. ROS quench and addition experiments confirmed that the generated OH with P application in high-fertility soils contributes 11–20 % of CO2 emissions; whereas P application in low-fertility soils favored soil organic C sequestration by decreasing O2•− content and maintaining low OH levels. Overall, the obtained results broaden the understanding of ROS production in soils and provide new insights into carbon turnover in fertilized soil.
活性氧(ROS)是土壤碳(C)转化的重要驱动因素,但活性氧(ROS)的产生如何响应磷(P)的施用并参与C的转化尚不清楚。通过为期6年的磷肥施用试验,我们发现施用磷肥使高肥力土壤和低肥力土壤的超氧化物(O2•−)含量分别降低了36%和69%,而羟基自由基(•OH)含量在高肥力土壤中增加了90%,但对低肥力土壤的影响很小。经过伽马灭菌后,O2•−含量和•OH含量分别下降了约54%和51%,这表明微生物在ROS的产生中发挥了重要作用。随机森林分析发现微生物C限制和P限制分别是O2•−和•OH生产的驱动因素。施磷加剧微生物C限制可能通过降低共同营养细菌(主要是Alphaproteobacteria和Betaproteobacteria)的相对丰度来抑制生物O2•−的产生。培养实验证实了这种抑制作用,并表明施磷肥缓解微生物磷限制通过增加低结晶度矿物中表面吸附铁(II)和铁(II)的含量来促进芬顿样反应中•OH的产生。灭菌实验证实,铁(II)含量的增加是由铁还原微生物引起的。此外,培养实验进一步揭示,微生物C-P共同限制比单一限制对ROS含量的负面影响更强,这可能解释了C-P共同限制更明显的低肥力土壤中ROS水平较低的原因。活性氧猝灭和添加实验证实,高肥力土壤施磷产生的•OH贡献了11 - 20%的CO2排放;而在低肥力土壤中施用磷肥有利于土壤有机碳的固存,通过降低O2•−含量和维持较低的•OH水平。总的来说,获得的结果拓宽了对土壤中活性氧产生的理解,并为施肥土壤的碳周转提供了新的见解。
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引用次数: 0
The role of bacterial rrn copy number in shaping ecological strategies in soil: Is it time to re-evaluate this functional trait? 细菌rrn拷贝数在塑造土壤生态策略中的作用:是时候重新评估这一功能特性了吗?
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-01-19 DOI: 10.1016/j.soilbio.2026.110099
Jaron Adkins , Karen M. Foley , Karen H. Beard , Trisha B. Atwood , Bonnie G. Waring
Developing a mechanistic understanding of how soil microbial communities underlie ecosystem functions has become a pressing need in the face of rapid environmental change. In service of this goal, soil microbial ecologists have sought to develop general principles about the ecological strategies that soil microbes adopt and the functional traits that contribute to those strategies. Among bacteria, the trait most commonly invoked as an indicator for bacterial performance and ecological strategy in soils is bacterial rrn operon copy number (RCN), which is frequently applied as an indicator of a bacterial community's position on a continuum of copiotrophic vs oligotrophic ecological strategies. The use of RCN as a proxy for bacterial ecological strategy is based on the premise that RCN mediates a tradeoff between bacterial growth rate and growth yield efficiency. However, support for RCN in mediating a growth rate-yield tradeoff is limited to a small number of studies performed in culture environments, and there is no evidence for the involvement of RCN in such a tradeoff in real soils. In contrast, emerging evidence suggests that RCN has a positive influence on soil extracellular enzyme activity, indicating that RCN may be a functional trait related to decomposition activity in soils. Here, we draw on new and previously published empirical data as well as simulation modelling to reassess the contribution of RCN to bacterial ecological strategies in soils. We conclude that while RCN is positively associated with bacterial growth rate and soil exoenzyme activity under some resource conditions, its relationship to growth yield efficiency remains unclear. Considering this, we suggest that RCN holds promise for understanding the contribution of soil bacteria to ecosystem functions, but the common application of RCN as an indicator of overall bacterial ecological strategy is inappropriate in light of current evidence.
面对快速的环境变化,发展对土壤微生物群落如何影响生态系统功能的机制理解已成为迫切需要。为了实现这一目标,土壤微生物生态学家试图发展关于土壤微生物采用的生态策略和有助于这些策略的功能特征的一般原则。在细菌中,细菌rrn操纵子拷贝数(RCN)是土壤中细菌表现和生态策略最常用的指标,它经常被用作细菌群落在共养与寡养生态策略连续体中的位置的指标。使用RCN作为细菌生态策略的代理是基于RCN在细菌生长速率和生长产量效率之间进行权衡的前提。然而,支持RCN调节生长速率-产量权衡的研究仅限于在培养环境中进行的少数研究,并且没有证据表明RCN参与实际土壤中的这种权衡。相反,新出现的证据表明,RCN对土壤胞外酶活性有积极影响,表明RCN可能是与土壤分解活性相关的功能性状。在这里,我们利用新的和以前发表的经验数据以及模拟模型来重新评估RCN对土壤中细菌生态策略的贡献。我们得出结论,虽然在某些资源条件下RCN与细菌生长速率和土壤外酶活性呈正相关,但其与生长产量效率的关系尚不清楚。考虑到这一点,我们认为RCN有望理解土壤细菌对生态系统功能的贡献,但根据目前的证据,将RCN作为整体细菌生态策略的指标是不合适的。
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引用次数: 0
Accelerated phosphorus immobilization at high soil temperatures may decrease net mineralization 在高土壤温度下加速磷固定化可能降低净矿化
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-01-19 DOI: 10.1016/j.soilbio.2026.110096
Chase S. Kasmerchak , Li Chongyang , Andrew J. Margenot
Soil phosphorus (P) mineralization (Pmin) is expected to be sensitive to temperature, but the degree of temperature sensitivity remains uncharacterized. We quantified the temperature sensitivity of gross Pmin, P immobilization (Pimm) and resulting net Pmin at 5°, 10°, and 20 °C using 33P-labeling and isotopic exchange kinetics in soils (0–15 cm depth) of varying biophysical properties from four sites with long-term agricultural management practices (30–145 y) and one restored prairie (34 y) encompassing a 350 km latitudinal transect representative of the central USA. Over 28 d, gross Pmin and Pimm fluxes were consistently higher than 5° and 10 °C, resulting in 3.7-fold larger gross Pmin versus Pimm pools at 20 °C, and 5- to 37-fold larger than gross Pmin and Pimm at lower temperatures. Cumulative net Pmin pools plateaued by 3–7 d at 5° and 10 °C but increased over 28 d at 20 °C. Net Pmin pools more closely approximated temporal changes in gross Pmin pools at 5° and 10 °C compared to at 20 °C (i.e., low Pmin efficiency). Multivariate least absolute shrinkage and selection operator (LASSO) models indicated gross and net Pmin at 10 °C were most strongly predicted by silt plus clay content (S + C), followed by microbial biomass carbon, phosphomonoesterase activities that catalyze gross Pmin and organic C-to-P ratios (C:Po), Pimm at 5 °C by S + C and microbial biomass nitrogen, and all pools at 20 °C by Po and microbial biomass C. Notably, phosphomonoesterase activities were important predictors of Pimm at 20 °C but not gross not net Pmin. Pimm at 10 °C and both Pmin pools at 5 °C were best predicted by univariate relationships with C:Po and pH, respectively. Our study identifies the capacity for soil temperature to modulate which and how biophysical soil properties influence soil P mineralization-immobilization, with non-linear impacts of temperature on net Pmin.
土壤磷矿化(Pmin)对温度敏感,但其温度敏感程度尚不明确。我们量化了总磷、磷固定化(Pimm)和由此产生的净磷在5°、10°和20°C时的温度敏感性,使用了不同生物物理性质的土壤(0-15 cm深度)中的33p标记和同位素交换动力学,这些土壤来自四个长期农业管理地点(30-145年)和一个恢复草原(34年),包括350公里纬向的美国中部样带。在28 d内,总Pmin和Pimm通量始终高于5°和10°C,导致20°C时总Pmin比Pimm池大3.7倍,在较低温度下比总Pmin和Pimm池大5- 37倍。在5°C和10°C条件下,累积净Pmin池在3-7天内趋于稳定,但在20°C条件下,累积净Pmin池在28天内增加。与20°C相比,净Pmin池更接近5°C和10°C时总Pmin池的时间变化(即低Pmin效率)。多元最小绝对收缩和选择操作(LASSO)模型表明,淤泥+粘土含量(S + C)最能预测10°C时的总Pmin和净Pmin,其次是微生物生物量碳、催化总Pmin和有机C- p比(C:Po)的磷酸单酯酶活性、5°C时S + C和微生物生物量氮的Pmin,以及20°C时Po和微生物生物量C的所有池。磷酸单酯酶活性是20°C时ppm的重要预测因子,但不是总Pmin和净Pmin的重要预测因子。10°C和5°C的两个Pmin池分别通过C:Po和pH的单变量关系预测最佳。我们的研究确定了土壤温度调节土壤生物物理性质影响土壤磷矿化-固定化的能力,以及温度对净磷的非线性影响。
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引用次数: 0
Aluminum-induced changes in rhizosphere inorganic phosphorus fractions drive ectomycorrhizal fungal community restructuring in Pinus massoniana 铝诱导马尾松根际无机磷组分变化驱动外生菌根真菌群落重构
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-01-15 DOI: 10.1016/j.soilbio.2026.110094
Yaru Lv , Dongmei Chen , Xirong Gu , Yangxiao Deng , Shirui Xu , Xiaoyu Zhou , Xinhua He
Aluminum (Al) toxicity is a major factor limiting forest productivity in acidic soil. Some ectomycorrhizal (ECM) fungi could enhance Al tolerance in trees grown in acidic soil. However, how interactions between soil inorganic phosphorus (IP) and labile Al fractions under Al stress drive the restructuring of ECM fungal communities and influence host adaptability remains poorly understood. In this study, we conducted a field experiment on Pinus massoniana, an Al-tolerant species, using a gradient of exogenous Al3+ additions (0–3.5 mM) over naturally high background levels to assess its impacts on rhizosphere soil and fine roots. Specifically, we measured the IP and labile Al fractions, ECM fungal community structure, and root morphological and anatomical traits. We found that low Al concentrations (≤1.5 mM) increased soil pH and elevated occluded P and calcium-bound P levels, while reducing Al-bound and iron-bound P. High Al levels (>2.0 mM) produced the opposite effect. Redundancy analysis identified IP fractions as the primary environmental factor influencing ECM fungal community structure. Variance partitioning analysis further indicated that IP fractions had a stronger effect on community restructuring than labile Al fractions. Scleroderma yunnanense, Cenococcum geophilum, Clavulina amethystina, Russula, and Rhizopogon boninensis emerged as the dominant colonizers of P. massoniana root tips across different Al gradients. Root growth and mantle thickness showed optimal responses at moderate concentrations, identifying 2.0 mM Al3+ as the tolerance threshold. Partial least squares structural equation modeling confirmed the pH-mediated transformations of IP and labile Al fractions. IP fractions had a greater impact on soil (β = −0.416) and root tip (β = 0.200) ECM fungal communities than labile Al fractions (βsoil = 0.158), emerging as the key driver of community restructuring. Our findings provide mechanistic insights into plant-fungal-soil interactions under Al stress and support the potential use of mycorrhizal technology in ecological restoration of acidic forests.
铝毒性是酸性土壤中限制森林生产力的主要因素。一些外生菌根真菌(ECM)能提高酸性土壤中树木的铝耐受性。然而,在铝胁迫下,土壤无机磷(IP)与活性铝组分之间的相互作用如何驱动ECM真菌群落的重组并影响寄主的适应性,目前尚不清楚。本研究以马尾松(Pinus massoniana)为研究对象,在自然高背景水平上,采用外源Al3+添加梯度(0-3.5 mM),评估其对根际土壤和细根的影响。具体而言,我们测量了IP和不稳定Al组分,ECM真菌群落结构以及根的形态和解剖特征。我们发现,低铝浓度(≤1.5 mM)增加了土壤pH值,提高了封闭磷和钙结合磷水平,而降低了铝结合磷和铁结合磷。高铝浓度(≤2.0 mM)产生相反的效果。冗余度分析表明,IP分数是影响ECM真菌群落结构的主要环境因子。方差划分分析进一步表明,IP组分对群落重构的影响强于不稳定Al组分。在不同的铝梯度上,云南硬皮病(Scleroderma yunnanense)、地球新球菌(Cenococcum geophilum)、紫针叶虫(Clavulina amethystina)、乌苏菌(Russula)和博宁根瘤菌(Rhizopogon boninensis)是马尾松根尖的优势寄主。根系生长和地幔厚度在中等浓度下表现出最佳响应,并确定2.0 mM Al3+为耐受阈值。偏最小二乘结构方程模型证实了ph介导的IP和不稳定Al组分的转换。土壤(β = - 0.416)和根尖(β = 0.200)对土壤ECM真菌群落的影响大于土壤(β = 0.158),成为群落重构的关键驱动因素。我们的发现为铝胁迫下植物-真菌-土壤相互作用的机理提供了见解,并支持菌根技术在酸性森林生态恢复中的潜在应用。
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引用次数: 0
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Soil Biology & Biochemistry
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